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nixpkgs/pkgs/applications/science/biology
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R. RyanTM 00cdff318a picard-tools: 2.18.23 -> 2.18.25 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/picard-tools/versions
2019-01-28 17:17:30 +00:00
..
ants
treewide: remove ctest usages
2018-11-18 19:31:02 -06:00
bcftools
bcftools: 1.8 -> 1.9 (#43950)
2018-07-30 22:36:27 +02:00
bedtools
…
bftools
bftools: init at 5.9.2 (#53769)
2019-01-10 18:28:28 -05:00
bowtie2
bowtie2: fix missing dependencies
2018-12-05 10:51:30 +11:00
bwa
…
conglomerate
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
dcm2niix
…
diamond
pkgs/*: remove unreferenced function arguments
2018-07-21 02:48:04 +00:00
ecopcr
…
emboss
…
EZminc
treewide: remove ctest usages
2018-11-18 19:31:02 -06:00
freebayes
pkgs/*: remove unreferenced function arguments
2018-07-21 02:48:04 +00:00
hisat2
hisat2: init 2.1.0
2018-08-17 23:03:42 +10:00
hmmer
hmmer: 3.1b2 -> 3.2.1 (#50284)
2018-11-13 15:43:44 +01:00
igv
igv: 2.4.15 -> 2.4.16
2018-12-26 10:44:01 +01:00
inormalize
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
iv
treewide: http -> https sources (#42676)
2018-06-28 20:43:35 +02:00
kallisto
…
minc-tools
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
minc-widgets
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
minimap2
minimap2: 2.10 -> 2.14 (#52845)
2019-01-13 22:34:45 +01:00
mni_autoreg
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
mosdepth
mosdeph: fix compilation with nim 0.19
2018-10-31 22:03:27 +01:00
mrbayes
…
muscle
…
N3
lib.makePerlPath -> perlPackages.makePerlPath
2018-12-15 03:50:31 +00:00
ncbi-tools
treewide: Make configureFlags lists
2018-08-03 17:06:03 -04:00
neuron
treewide: http -> https sources (#42676)
2018-06-28 20:43:35 +02:00
niftyreg
niftyreg: init at 1.3.9
2018-11-16 12:24:53 -05:00
niftyseg
niftyseg: init at 1.0.0
2018-11-16 12:29:29 -05:00
paml
paml: 4.9g -> 4.9h
2018-05-03 15:13:15 +02:00
picard-tools
picard-tools: 2.18.23 -> 2.18.25
2019-01-28 17:17:30 +00:00
platypus
platypus: 2017-03-07 -> 2018-07-22
2018-09-21 22:42:28 +00:00
plink
…
plink-ng
…
poretools
…
raxml
pkgs/*: remove unreferenced function arguments
2018-07-21 02:48:04 +00:00
samtools
samtools: 1.8 -> 1.9
2018-09-21 22:42:28 +00:00
seaview
seaview: init at 4.7 (#46595)
2018-09-13 14:10:44 +02:00
snpeff
…
somatic-sniper
somatic-sniper: disable parallel building
2018-08-03 08:27:41 +02:00
star
star: 2.6.1c -> 2.6.1d
2018-12-14 01:07:34 -08:00
strelka
strelka: init 2.9.5
2018-08-20 08:58:22 +10:00
varscan
…
vcftools
vcftools: 0.1.15 -> 0.1.16
2018-08-08 00:48:04 -07:00