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3464 Commits

Author SHA1 Message Date
Ben Wolsieffer bc93f123ea mavproxy: 1.8.18 -> 1.8.19 2020-04-24 18:03:57 -07:00
Lassulus d0b1de5491
Merge pull request #70401 from bzizou/quast 
Quast: init at 5.0.2
 2020-04-24 20:26:04 +02:00
Bruno Bzeznik eb51b462aa Quast: init at 5.0.2 2020-04-24 10:11:54 +02:00
Pavol Rusnak 461a252bee
verifast: change license to MIT 
It seems verifast was relicensed to MIT in 2016:
b3c1bce76a

As this was the only package using lib.licenses.msrla I dropped it.
 2020-04-23 09:59:33 +00:00
worldofpeace b4d5dd861b
Merge pull request #84673 from mmilata/qt5-mkDerivation-stdenv 
Use qt5's mkDerivation in packages that otherwise crash
 2020-04-22 13:39:46 -04:00
Martin Milata 7d1c2c05c5 caneda: use qt5's mkDerivation 2020-04-22 15:21:49 +02:00
Frederik Rietdijk ec21df329a
Merge pull request #85636 from matthewbauer/blas-lapack-fix-fallout-from-83888 
BLAS/LAPACK fix fallout from #83888
 2020-04-21 19:59:16 +02:00
Justin Bedo d8d6ecc418 mosdepth: 0.2.6 -> 0.2.9 2020-04-21 19:42:05 +02:00
Maximilian Bosch 68684b6376
stellarium: 0.20.0 -> 0.20.1 
https://github.com/Stellarium/stellarium/releases/tag/v0.20.1
 2020-04-21 18:05:15 +02:00
Matthew Bauer ff2f2644f8 blas,lapack: use isILP64 instead of is64bit 
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
 2020-04-20 16:02:43 -05:00
markuskowa d9af81af16
Merge pull request #85006 from r-ryantm/auto-update/verilator 
verilator: 4.030 -> 4.032
 2020-04-20 16:51:31 +02:00
Benjamin Hipple e4db75f46d
Merge pull request #84535 from bcdarwin/update-beluga 
beluga: 20180403 -> unstable-2020-03-11
 2020-04-19 22:53:50 -04:00
Ben Darwin ad7b7367b6 beluga: 20180403 -> unstable-2020-03-11 2020-04-19 21:54:06 -04:00
Mario Rodas f37c9226fc
lean: 3.8.0 -> 3.9.0 2020-04-18 04:20:00 -05:00
Matthew Bauer 97fc083fd4 giac: broken on 64-bit blas 2020-04-17 16:24:31 -05:00
Matthew Bauer 1c8aba8334 treewide: use blas and lapack 
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.

treewide: cleanup from blas/lapack changes

A few issues in the original treewide:

- can’t assume blas64 is a bool
- unused commented code
 2020-04-17 16:24:09 -05:00
worldofpeace 433ea74af1 nasc: fix build 2020-04-15 17:19:47 -04:00
AndersonTorres 3b91c3de8f gp2c: 0.0.11pl2 -> 0.0.11pl3 2020-04-15 00:45:28 -03:00
Benjamin Hipple 17a1bf5dbd
Merge pull request #85069 from r-ryantm/auto-update/ginac 
ginac: 1.7.8 -> 1.7.9
 2020-04-12 11:18:43 -04:00
R. RyanTM 9b5aad0644 ginac: 1.7.8 -> 1.7.9 2020-04-12 12:04:38 +00:00
R. RyanTM 3fcbc7545c verilator: 4.030 -> 4.032 2020-04-11 15:46:52 +00:00
Michael Reilly 84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Mario Rodas 8e537ad391
lean: 3.7.2 -> 3.8.0 2020-04-09 10:40:00 -05:00
Matt Huszagh fc66192b37 fparser: init at 4.5.1 2020-04-09 11:28:21 -07:00
Jonathan Ringer 3238302827 libpoly: fix src 2020-04-09 11:22:53 -07:00
R. RyanTM f4a9fe36fa libpoly: 0.1.7 -> 0.1.8 2020-04-09 10:29:28 -07:00
Timo Kaufmann b72fd98789
Merge pull request #84666 from jonringer/repofy-palp 
palp: correct metadata for repology
 2020-04-08 11:44:33 +00:00
Gabriel Ebner e71c0d80a1
Merge pull request #84583 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.8.0 -> 3.8.0a
 2020-04-08 11:01:33 +02:00
Vincent Laporte f4ff33cce6 alt-ergo: 2.3.1 → 2.3.2 2020-04-08 10:23:48 +02:00
Jonathan Ringer f89b76d9db
palp: correct metadata for repology 2020-04-07 14:08:03 -07:00
R. RyanTM 67ea5a0081 qalculate-gtk: 3.8.0 -> 3.8.0a 2020-04-07 10:29:32 +00:00
Mario Rodas c9ce292597
Merge pull request #84383 from r-ryantm/auto-update/gmsh 
gmsh: 4.5.4 -> 4.5.6
 2020-04-05 20:03:05 -05:00
R. RyanTM b43965986f gmsh: 4.5.4 -> 4.5.6 2020-04-05 19:28:16 +00:00
Vincent Laporte d6a8d0ca5b coq_8_11: 8.11.0 → 8.11.1 2020-04-05 15:32:32 +02:00
Frederik Rietdijk 866c5aa090 Merge master into staging-next 2020-04-05 08:33:39 +02:00
Jan Tojnar 418628e162
dsview: fix build 
It was using libusb-compat instead of libusb1, and the former no longer propagates the latter.
 2020-04-05 01:13:14 +02:00
Timo Kaufmann 02b1f2a2de
Merge pull request #83224 from shnarazk/cadical-pr 
cadical: init at 1.2.1
 2020-04-04 15:44:04 +00:00
Narazaki, Shuji c5a12e33d2 cadical: init at 1.2.1 2020-04-05 00:22:36 +09:00
Jan Tojnar 08cf27e5d9
libsigrok4dsl: fix build 
It was using libusb-compat instead of libusb1, and the former no longer propagates the latter.
 2020-04-04 10:50:34 +02:00
Dmitry Kalinkin 99a236b477
Merge pull request #83914 from cgevans/gwyddion-darwin 
gwyddion: support darwin
 2020-04-01 21:44:21 -04:00
Constantine Glen Evans cacbbe92bf
gwyddion: add darwin support 
Gwyddion will build on Darwin, but gnome2.gtkglext is broken there,
and so I am disabling it as an optional dependency here when building
on Darwin.
 2020-04-01 17:50:36 -07:00
R. RyanTM 92c8881358 picard-tools: 2.22.0 -> 2.22.2 2020-04-01 17:29:55 +00:00
Timo Kaufmann 83fd89945d
Merge pull request #79661 from luc65r/pkg/cemu 
cemu: init at 1.3
 2020-03-31 15:17:33 +00:00
R. RyanTM 3017e6989f deeptools: 3.3.1 -> 3.4.1 2020-03-30 21:47:32 -07:00
R. RyanTM cff5adc2fb
snakemake: 5.10.0 -> 5.13.0 (#83839) 2020-03-31 00:39:00 -04:00
R. RyanTM bd245a755f stacks: 2.41 -> 2.52 2020-03-30 16:13:02 -07:00
Ryan Mulligan d8c21cb4bc
Merge pull request #83746 from r-ryantm/auto-update/marvin 
marvin: 20.6.0 -> 20.9.0
 2020-03-30 06:14:11 -07:00
R. RyanTM 1d349b8512 marvin: 20.6.0 -> 20.9.0 2020-03-30 04:02:45 +00:00
luc65r 8edd400bfb
rofi-calc: init at 1.6 (#83136) 
Also:
* maintainers: add albakhamj
* maintainers: add luc65r
* rofi: add plugins argument to wrapper

Co-authored-by: Maciej Krüger <mkg20001@gmail.com>
 2020-03-30 01:18:56 +02:00
Maximilian Bosch 9e7c54325e
stellarium: 0.19.3 -> 0.20.0 
https://github.com/Stellarium/stellarium/releases/tag/v0.20.0
 2020-03-29 17:56:35 +02:00
Jörg Thalheim d04396da8b
Merge pull request #82852 from Mic92/cross-build-rust-package 
[WIP] buildRustPackage: enable strictDeps
 2020-03-29 14:07:07 +01:00
Guanpeng Xu d2702c915f mathematica: 12.0.0 -> 12.1.0 2020-03-29 14:38:33 +02:00
Jörg Thalheim e841dce44a
rink: fix strict deps build 2020-03-29 12:37:25 +01:00
Constantine Glen Evans 59fbc7acba gwyddion: 2.48 -> 2.55 (and add options) 
Gwyddion has a large number of optional dependencies. In this update,
those dependencies have been added with options set mostly to true,
and an option (default false) for working Python 2.7 support in the
program and in Python has been added. I have also added myself as a
maintainer as no maintainer is currently set.
 2020-03-27 10:56:00 -07:00
Ryan Mulligan c669d2991b
Merge pull request #83464 from r-ryantm/auto-update/last 
last: 1047 -> 1060
 2020-03-27 07:34:18 -07:00
R. RyanTM bd3fbef804 last: 1047 -> 1060 2020-03-27 04:12:41 +00:00
Ryan Mulligan 8c5f9d0200
Merge pull request #83390 from r-ryantm/auto-update/seaview 
seaview: 5.0 -> 5.0.2
 2020-03-26 03:10:56 -07:00
R. RyanTM 4a3ea14b5b seaview: 5.0 -> 5.0.2 2020-03-26 00:25:29 +00:00
Austin Seipp 517fd073fc
xcircuit: 3.9.73 -> 3.10.12, maintain 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-25 17:46:15 -05:00
Austin Seipp 765b2fd866
mcy: 2020.03.16 -> 2020.03.21 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-25 06:46:01 -05:00
Austin Seipp 4808bef486
symbiyosys: 2020.02.11 -> 2020.03.24 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-25 06:46:01 -05:00
Vincent Laporte 618bca7054 alt-ergo: 2.3.0 → 2.3.1 2020-03-24 20:43:06 -04:00
Mario Rodas b2df6d541d
lean: 3.7.0 -> 3.7.2 2020-03-22 04:20:00 -05:00
Mario Rodas baeb670ce2
Merge pull request #82610 from r-ryantm/auto-update/eagle 
eagle: 9.5.2 -> 9.6.0
 2020-03-20 06:21:30 -05:00
Vincent Laporte 8dddd8a07f ocamlPackages.camlp5: 7.10 → 7.11 2020-03-19 18:04:14 -07:00
Claudio Bley 39767f8ae5
foldingathome: Make FAHControl be able to start the FAHViewer (#82925) 
The command to run when clicking the button is configurable, but by default it
tries to run `FAHViewer`.
 2020-03-19 13:05:54 +00:00
Austin Seipp 2ef42e07fd
mcy: 2020.02.05 -> 2020.03.16 
Now with working web UI dashboard -- but no working GUI (yet!)

Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:40 -05:00
Austin Seipp 5cd4fd5bc5
symbiyosys: 2020.02.08 -> 2020.02.11 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:40 -05:00
Austin Seipp 9b43cf3a00
yosys: 2020.02.25 -> 2020.03.16 
- Bump `abc-verifier` (2020.03.05)
  - Install `yosys-abc` symlink for tool compatbility
  - Various `yosys` expression cleanups

Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:37 -05:00
Dmitry Kalinkin ebe5f10794
kicad: don't build versions with 3d on Hydra 
The hydraPlatforms have to be set on the kicad package itself, that can be
checked using:

  echo ":p { inherit kicad kicad-small kicad-unstable; }" | nix repl ./pkgs/top-level/release.nix

This commit disables build of all kicad variants that require downloading
packages3d, which currently fail on hydra with the "Output limit exceeded"
status. This leaves Hydra with only building the kicad-small, which will allow
us to cache the build of kicad-base as well as all libraries except of
packages3d.
 2020-03-16 19:45:04 -04:00
Dmitry Kalinkin 68db99ad97 snakemake: 5.9.1 -> 5.10.0 2020-03-14 15:58:24 -07:00
R. RyanTM bafbfc5a06 eagle: 9.5.2 -> 9.6.0 2020-03-14 20:19:26 +00:00
zimbatm 001be890f7 folding@home: 6.02 -> 7.5.1 
The v7 series is very different.

This commit introduces the 3 packages: fahclient, fahcontrol and
fahviewer. It also rebuilds the NixOS module to map better with the new
client.
 2020-03-14 13:01:26 -07:00
Frederik Rietdijk 5175c35a99
Merge pull request #81611 from r-ryantm/auto-update/R 
R: 3.6.2 -> 3.6.3
 2020-03-14 14:29:05 +01:00
Josef Kemetmüller 3a8d05747b qgroundcontrol: Fix build 
This silences some warnings to not run into "Log limit exceeded" on
hydra.
 2020-03-14 03:18:39 +00:00
Mario Rodas c935567de6 lean: 3.6.1 -> 3.7.0 2020-03-14 01:32:58 +00:00
wucke13 c24b9a57c4 getdp: 3.0.4 -> 3.3.0 2020-03-13 04:10:20 +00:00
R. RyanTM a58d091d8d verilator: 4.028 -> 4.030 2020-03-12 20:57:34 -05:00
Maximilian Bosch 76821e6f43
geogebra: 5-0-573-0 -> 5-0-574-0 2020-03-12 18:12:57 +01:00
Timo Kaufmann ba589e24c9 sage: patch for pari 2.11.3 2020-03-12 12:24:41 +01:00
Timo Kaufmann c4ab541443 pari: backport bug fix 
https://trac.sagemath.org/ticket/29313#comment:4
 2020-03-12 12:24:35 +01:00
xaverdh 5ac085c3cc
wxmaxima: 18.02.0 -> 20.02.4 (#82323) 
The commit description is 18.02.0 -> 20.02.4, because in the last version bump (1c6a193b3e), the version string was changed, but the hash was not.

Co-authored-by: Dmitry Kalinkin <dmitry.kalinkin@gmail.com>
 2020-03-11 12:07:53 -04:00
Timo Kaufmann 1a6b1fb32a symmetrica: add timokau to maintainers 2020-03-10 18:10:28 +01:00
Timo Kaufmann 0c875c28c6 symmetrica: 2.0 -> 3.0.1 
This switches to the sagemath fork, since the original upstream is no
longer maintained and sagemath has effectively maintained symmetrica
through patches for a while now. The update fixes one bug in particular
that has caused failures in the sagemath test suite:

https://github.com/NixOS/nixpkgs/issues/81449
https://trac.sagemath.org/ticket/15312
https://trac.sagemath.org/ticket/29061

Regarding the licensing change:

7cf91b3800
 2020-03-10 18:10:25 +01:00
Timo Kaufmann e05e219b31
Merge pull request #82240 from timokau/sage-docutils-0.15-fix 
sage: fix test suite with docutils 0.15
 2020-03-10 15:25:22 +00:00
Timo Kaufmann 7133577405 sage: fix test suite with docutils 0.15 
The better way to fix this would be to backport the upstream sphinx
patch:

faedcc48cc

Unfortunately it doesn't apply cleanly and isn't worth the effort
of backporting. Let's hope we can switch to python3 sage and the recent
sphinx version that comes with it before this becomes a problem.
 2020-03-10 13:15:41 +01:00
Timo Kaufmann 63ed2bf3c3
Merge pull request #81950 from r-ryantm/auto-update/pari 
pari: 2.11.2 -> 2.11.3
 2020-03-09 17:31:14 +00:00
Michael Raskin bbab73266d
Merge pull request #80719 from mucaho/feature/clingcon_init 
clingcon: init at 3.3.0
 2020-03-09 07:42:38 +00:00
mucaho 202c2a8eff clingcon: init at 3.3.0 2020-03-08 19:21:55 +01:00
Maximilian Bosch 84f862ed91
Merge pull request #81796 from JohnAZoidberg/satallax-gcc9 
satallax: Fix build with GCC9
 2020-03-08 16:12:40 +01:00
Gabriel Ebner d7a68e9bce
Merge pull request #82028 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.7.0 -> 3.8.0
 2020-03-08 13:31:00 +01:00
Frederik Rietdijk 0eb0ddc4db Merge staging-next into master 2020-03-08 08:11:01 +01:00
R. RyanTM e6f5bb8dc4 qalculate-gtk: 3.7.0 -> 3.8.0 2020-03-08 00:14:22 +00:00
Vincent Laporte dcfccdfc33
acgtk: 1.5.0 → 1.5.1 (#81539) 
Co-authored-by: Jon <jonringer@users.noreply.github.com>
 2020-03-07 09:56:18 +01:00
R. RyanTM 6528554396 pari: 2.11.2 -> 2.11.3 2020-03-07 02:43:40 +00:00
Gabriel Ebner 8428f5bb4a elan: v0.8.0 tag was force-pushed by upstream 2020-03-06 15:35:37 +01:00
Gabriel Ebner 70e5428d66 elan: 0.7.5 -> 0.8.0 2020-03-06 14:28:36 +01:00
Joachim Breitner 2d2a5a9b63
js_of_ocaml: 3.4.0 -> 3.5.2 (#75766) 
drive-by contributions, as I was playing around with this (it has better
support for the `num` library, it seems.)

js_of_ocaml: 3.4.0 -> 3.5.2
ocamlPackages.js_of_ocaml-ppx_deriving_json: use ppxlib-0.12.0
ocamlPackages.eliom: 6.8.0 → 6.10.1
ocamlPackages.ocsigen-toolkit: 2.2.0 → 2.5.0
ocamlPackages.ocsigen-start: 2.7.0 → 2.16.1

Co-authored-by: Vincent Laporte <Vincent.Laporte@gmail.com>
 2020-03-06 07:42:04 +01:00
Frederik Rietdijk 188c3a4d03 Merge staging-next into staging 2020-03-06 07:09:30 +01:00
Mario Rodas 7597bdd59b
Merge pull request #81783 from r-ryantm/auto-update/gmsh 
gmsh: 4.5.2 -> 4.5.4
 2020-03-05 08:31:38 -05:00