public
/
nixpkgs
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

r-modules: drop broken irkernel package set 

We can no longer update that package set since, apparently, it has moved
to a different packaging scheme.
This commit is contained in:
Peter Simons 2017-03-04 21:50:20 +01:00
parent 3dc4e12ff0
commit f4595fa555
4 changed files with 2 additions and 24 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

3
pkgs/development/r-modules/README.md
View File

@ -94,9 +94,6 @@ mv cran-packages.nix.new cran-packages.nix
Rscript generate-r-packages.R bioc > bioc-packages.nix.new
mv bioc-packages.nix.new bioc-packages.nix
Rscript generate-r-packages.R irkernel > irkernel-packages.nix.new
mv irkernel-packages.nix.new irkernel-packages.nix
```
`generate-r-packages.R <repo>` reads `<repo>-packages.nix`, therefor the renaming.

9
pkgs/development/r-modules/default.nix
View File

@ -38,7 +38,7 @@ let
meta.broken = broken;
});
# Templates for generating Bioconductor, CRAN and IRkernel packages
# Templates for generating Bioconductor and CRAN packages
# from the name, version, sha256, and optional per-package arguments above
#
deriveBioc = mkDerive {
@ -57,10 +57,6 @@ let
mkHomepage = {name, snapshot}: "http://mran.revolutionanalytics.com/snapshot/${snapshot}/web/packages/${name}/";
mkUrls = {name, version, snapshot}: [ "http://mran.revolutionanalytics.com/snapshot/${snapshot}/src/contrib/${name}_${version}.tar.gz" ];
};
deriveIRkernel = mkDerive {
mkHomepage = {name}: "https://irkernel.github.io/";
mkUrls = {name, version}: [ "http://irkernel.github.io/src/contrib/${name}_${version}.tar.gz" ];
};
# Overrides package definitions with nativeBuildInputs.
# For example,
@ -222,8 +218,7 @@ let
_self = import ./bioc-packages.nix { inherit self; derive = deriveBioc; } //
import ./bioc-annotation-packages.nix { inherit self; derive = deriveBiocAnn; } //
import ./bioc-experiment-packages.nix { inherit self; derive = deriveBiocExp; } //
import ./cran-packages.nix { inherit self; derive = deriveCran; } //
import ./irkernel-packages.nix { inherit self; derive = deriveIRkernel; };
import ./cran-packages.nix { inherit self; derive = deriveCran; };
# tweaks for the individual packages and "in self" follow

1
pkgs/development/r-modules/generate-r-packages.R
View File

@ -10,7 +10,6 @@ mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/pa
, "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/annotation/src/contrib/")
, "bioc-experiment"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/experiment/src/contrib/")
, cran=paste0("http://mran.revolutionanalytics.com/snapshot/", snapshotDate, "/src/contrib/")
, irkernel="http://irkernel.github.io/src/contrib/"
)
mirrorType <- commandArgs(trailingOnly=TRUE)[1]

13
pkgs/development/r-modules/irkernel-packages.nix
View File

@ -1,13 +0,0 @@
# This file is generated from generate-r-packages.R. DO NOT EDIT.
# Execute the following command to update the file.
#
# Rscript generate-r-packages.R irkernel >new && mv new irkernel-packages.nix
{ self, derive }:
let derive2 = derive {};
in with self; {
IRdisplay = derive2 { name="IRdisplay"; version="0.3"; sha256="0aa7v3x6s9jd5kzwfh4659gm3dqkmadbk40a0jdpm856mf9r5w6s"; depends=[base64enc repr]; };
IRkernel = derive2 { name="IRkernel"; version="0.5"; sha256="0v9f01j1ysadq2f8d4mpbimrspj7051cncl0rd1n97rb8wlb9rrf"; depends=[digest evaluate IRdisplay jsonlite repr rzmq uuid]; };
repr = derive2 { name="repr"; version="0.4"; sha256="1mhvslkxr5nkxiijapzm29jpmjnhhjs1v9s84xvhqpxlcav8dsn6"; depends=[]; };
rzmq = derive2 { name="rzmq"; version="0.7.7"; sha256="0cds9wsbfb7lhgfjjfisv1i3905ny7x3i2wbb1rcih03ba4a1ij3"; depends=[]; };
}