Merge master into staging-next

doc/languages-frameworks/go.xml

@@ -42,7 +42,7 @@ pet = buildGoModule rec {
 
   meta = with lib; {
     description = "Simple command-line snippet manager, written in Go";
-    homepage = https://github.com/knqyf263/pet;
+    homepage = "https://github.com/knqyf263/pet";
     license = licenses.mit;
     maintainers = with maintainers; [ kalbasit ];
     platforms = platforms.linux ++ platforms.darwin;

doc/languages-frameworks/idris.section.md

@@ -96,7 +96,7 @@ build-idris-package  {
 
   meta = {
     description = "Idris YAML lib";
-    homepage = https://github.com/Heather/Idris.Yaml;
+    homepage = "https://github.com/Heather/Idris.Yaml";
     license = lib.licenses.mit;
     maintainers = [ lib.maintainers.brainrape ];
   };

doc/languages-frameworks/ocaml.xml

@@ -36,7 +36,7 @@ buildDunePackage rec {
   doCheck = true;
 
   meta = {
-    homepage = https://github.com/inhabitedtype/angstrom;
+    homepage = "https://github.com/inhabitedtype/angstrom";
     description = "OCaml parser combinators built for speed and memory efficiency";
     license = stdenv.lib.licenses.bsd3;
     maintainers = with stdenv.lib.maintainers; [ sternenseemann ];
@@ -63,7 +63,7 @@ buildDunePackage rec {
   };
 
   meta = with stdenv.lib; {
-    homepage = https://github.com/flowtype/ocaml-wtf8;
+    homepage = "https://github.com/flowtype/ocaml-wtf8";
     description = "WTF-8 is a superset of UTF-8 that allows unpaired surrogates.";
     license = licenses.mit;
     maintainers = [ maintainers.eqyiel ];

doc/languages-frameworks/python.section.md

@@ -241,7 +241,7 @@ buildPythonPackage rec {
   doCheck = false;
 
   meta = with lib; {
-    homepage = https://github.com/pytoolz/toolz;
+    homepage = "https://github.com/pytoolz/toolz";
     description = "List processing tools and functional utilities";
     license = licenses.bsd3;
     maintainers = with maintainers; [ fridh ];
@@ -335,7 +335,7 @@ buildPythonPackage rec {
   propagatedBuildInputs = [ numpy multipledispatch dateutil ];
 
   meta = with lib; {
-    homepage = https://github.com/ContinuumIO/datashape;
+    homepage = "https://github.com/ContinuumIO/datashape";
     description = "A data description language";
     license = licenses.bsd2;
     maintainers = with maintainers; [ fridh ];
@@ -369,7 +369,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Pythonic binding for the libxml2 and libxslt libraries";
-    homepage = https://lxml.de;
+    homepage = "https://lxml.de";
     license = licenses.bsd3;
     maintainers = with maintainers; [ sjourdois ];
   };

doc/languages-frameworks/rust.section.md

@@ -40,7 +40,7 @@ rustPlatform.buildRustPackage rec {
 
   meta = with stdenv.lib; {
     description = "A fast line-oriented regex search tool, similar to ag and ack";
-    homepage = https://github.com/BurntSushi/ripgrep;
+    homepage = "https://github.com/BurntSushi/ripgrep";
     license = licenses.unlicense;
     maintainers = [ maintainers.tailhook ];
     platforms = platforms.all;

doc/stdenv/meta.xml

@@ -11,7 +11,7 @@ meta = with stdenv.lib; {
     GNU Hello is a program that prints "Hello, world!" when you run it.
     It is fully customizable.
   '';
-  homepage = https://www.gnu.org/software/hello/manual/;
+  homepage = "https://www.gnu.org/software/hello/manual/";
   license = licenses.gpl3Plus;
   maintainers = [ maintainers.eelco ];
   platforms = platforms.all;

maintainers/maintainer-list.nix

@@ -2257,6 +2257,7 @@
   ericdallo = {
     email = "ercdll1337@gmail.com";
     github = "ericdallo";
+    githubId = 7820865;
     name = "Eric Dallo";
   };
   ericsagnes = {

nixos/modules/services/networking/shorewall.nix

@@ -33,7 +33,6 @@ in {
           The attribute name defines the name of the config,
           and the attribute value defines the content of the config.
         '';
-        apply = lib.mapAttrs (name: text: pkgs.writeText "${name}" text);
       };
     };
   };
@@ -63,12 +62,7 @@ in {
       '';
     };
     environment = {
-      etc = lib.mapAttrsToList
+      etc = lib.mapAttrs' (name: conf: lib.nameValuePair "shorewall/${name}" {text=conf;}) cfg.configs;
-              (name: file:
-                { source = file;
-                  target = "shorewall/${name}";
-                })
-              cfg.configs;
       systemPackages = [ cfg.package ];
     };
   };

nixos/modules/services/networking/shorewall6.nix

@@ -33,7 +33,6 @@ in {
           The attribute name defines the name of the config,
           and the attribute value defines the content of the config.
         '';
-        apply = lib.mapAttrs (name: text: pkgs.writeText "${name}" text);
       };
     };
   };
@@ -63,12 +62,7 @@ in {
       '';
     };
     environment = {
-      etc = lib.mapAttrsToList
+      etc = lib.mapAttrs' (name: conf: lib.nameValuePair "shorewall6/${name}" {text=conf;}) cfg.configs;
-              (name: file:
-                { source = file;
-                  target = "shorewall6/${name}";
-                })
-              cfg.configs;
       systemPackages = [ cfg.package ];
     };
   };

nixos/modules/virtualisation/docker-containers.nix

@@ -210,6 +210,15 @@ let
     wantedBy = [] ++ optional (container.autoStart) "multi-user.target";
     after = [ "docker.service" "docker.socket" ] ++ mkAfter;
     requires = after;
+    path = [ pkgs.docker ];
+
+    preStart = ''
+      docker rm -f ${name} || true
+      ${optionalString (container.imageFile != null) ''
+        docker load -i ${container.imageFile}
+        ''}
+      '';
+    postStop = "docker rm -f ${name} || true";
         
     serviceConfig = {
       ExecStart = concatStringsSep " \\\n  " ([
@@ -229,12 +238,7 @@ let
         ++ map escapeShellArg container.cmd
       );
 
-      ExecStartPre =
+      ExecStop = ''${pkgs.bash}/bin/sh -c "[ $SERVICE_RESULT = success ] || docker stop ${name}"'';
-        ["-${pkgs.docker}/bin/docker rm -f ${name}"] ++
-        (optional (container.imageFile != null) "${pkgs.docker}/bin/docker load -i ${container.imageFile}");
-
-      ExecStop = ''${pkgs.bash}/bin/sh -c "[ $SERVICE_RESULT = success ] || ${pkgs.docker}/bin/docker stop ${name}"'';
-      ExecStopPost = "-${pkgs.docker}/bin/docker rm -f ${name}";
 
       ### There is no generalized way of supporting `reload` for docker
       ### containers. Some containers may respond well to SIGHUP sent to their

nixos/tests/postgresql-wal-receiver.nix

@@ -6,17 +6,24 @@ with import ../lib/testing.nix { inherit system pkgs; };
 with pkgs.lib;
 
 let
+  makePostgresqlWalReceiverTest = subTestName: postgresqlPackage: let
+
   postgresqlDataDir = "/var/db/postgresql/test";
   replicationUser = "wal_receiver_user";
   replicationSlot = "wal_receiver_slot";
   replicationConn = "postgresql://${replicationUser}@localhost";
   baseBackupDir = "/tmp/pg_basebackup";
   walBackupDir = "/tmp/pg_wal";
-  recoveryConf = pkgs.writeText "recovery.conf" ''
+  atLeast12 = versionAtLeast postgresqlPackage.version "12.0";
+  restoreCommand = ''
     restore_command = 'cp ${walBackupDir}/%f %p'
   '';
 
-  makePostgresqlWalReceiverTest = subTestName: postgresqlPackage: makeTest {
+  recoveryFile = if atLeast12
+      then pkgs.writeTextDir "recovery.signal" ""
+      else pkgs.writeTextDir "recovery.conf" "${restoreCommand}";
+
+  in makeTest {
     name = "postgresql-wal-receiver-${subTestName}";
     meta.maintainers = with maintainers; [ pacien ];
 
@@ -29,6 +36,9 @@ let
           wal_level = archive # alias for replica on pg >= 9.6
           max_wal_senders = 10
           max_replication_slots = 10
+        '' + optionalString atLeast12 ''
+          ${restoreCommand}
+          recovery_end_command = 'touch recovery.done'
         '';
         authentication = ''
           host replication ${replicationUser} all trust
@@ -45,6 +55,9 @@ let
         slot = replicationSlot;
         directory = walBackupDir;
       };
+      # This is only to speedup test, it isn't time racing. Service is set to autorestart always,
+      # default 60sec is fine for real system, but is too much for a test
+      systemd.services.postgresql-wal-receiver-main.serviceConfig.RestartSec = mkForce 5;
     };
 
     testScript = ''
@@ -70,7 +83,7 @@ let
       # prepare WAL and recovery
       $machine->succeed('chmod a+rX -R ${walBackupDir}');
       $machine->execute('for part in ${walBackupDir}/*.partial; do mv $part ''${part%%.*}; done'); # make use of partial segments too
-      $machine->succeed('cp ${recoveryConf} ${postgresqlDataDir}/recovery.conf && chmod 666 ${postgresqlDataDir}/recovery.conf');
+      $machine->succeed('cp ${recoveryFile}/* ${postgresqlDataDir}/ && chmod 666 ${postgresqlDataDir}/recovery*');
 
       # replay WAL
       $machine->systemctl('start postgresql');

pkgs/applications/audio/gnome-podcasts/default.nix

@@ -32,10 +32,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0vy5i77bv8c22ldhrnr4z6kx22zqnb1lg3s7y8673bqjgd7dppi0";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1dlbdxsf9p2jzrsclm43k95y8m3zcd41qd9ajg1ii3fpnahi58kd";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1h0n8zclb8a1b1ri83viiwwzlj3anm38m4cp38aqyf6q40qga35q";
 
   nativeBuildInputs = [
     meson

pkgs/applications/audio/sonic-visualiser/default.nix

@@ -2,21 +2,23 @@
 
 { stdenv, fetchurl, alsaLib, bzip2, fftw, libjack2, libX11, liblo
 , libmad, libogg, librdf, librdf_raptor, librdf_rasqal, libsamplerate
-, libsndfile, pkgconfig, libpulseaudio, qtbase, redland
+, libsndfile, pkgconfig, libpulseaudio, qtbase, qtsvg, redland
-, qmake, rubberband, serd, sord, vampSDK, fftwFloat
+, rubberband, serd, sord, vampSDK, fftwFloat
+, capnproto, liboggz, libfishsound, libid3tag, opusfile
+, wrapQtAppsHook
 }:
 
 stdenv.mkDerivation rec {
   pname = "sonic-visualiser";
-  version = "2.4.1";
+  version = "4.0.1";
 
   src = fetchurl {
-    url = "https://code.soundsoftware.ac.uk/attachments/download/1185/${pname}-${version}.tar.gz";
+    url = "https://code.soundsoftware.ac.uk/attachments/download/2607/${pname}-${version}.tar.gz";
-    sha256 = "06nlha70kgrby16nyhngrv5q846xagnxdinv608v7ga7vpywwmyb";
+    sha256 = "14674adzp3chilymna236qyvci3b1zmi3wyz696wk7bcd3ndpsg6";
   };
 
   buildInputs =
-    [ libsndfile qtbase fftw fftwFloat bzip2 librdf rubberband
+    [ libsndfile qtbase qtsvg fftw fftwFloat bzip2 librdf rubberband
       libsamplerate vampSDK alsaLib librdf_raptor librdf_rasqal redland
       serd
       sord
@@ -26,23 +28,22 @@ stdenv.mkDerivation rec {
       libpulseaudio
       libmad
       libogg # ?
-      # fishsound
+      libfishsound
       liblo
       libX11
+      capnproto
+      liboggz
+      libid3tag
+      opusfile
     ];
 
-  nativeBuildInputs = [ pkgconfig qmake ];
+  nativeBuildInputs = [ pkgconfig wrapQtAppsHook ];
 
-  configurePhase = ''
+  enableParallelBuilding = true;
-    for i in sonic-visualiser svapp svcore svgui;
-      do cd $i && qmake PREFIX=$out && cd ..;
-    done
-  '';
 
-  installPhase = ''
+  # comment out the tests
-    mkdir -p $out/{bin,share/sonic-visualiser}
+  preConfigure = ''
-    cp sonic-visualiser $out/bin/
+    sed -i 's/sub_test_svcore_/#sub_test_svcore_/' sonic-visualiser.pro
-    cp -r samples $out/share/sonic-visualiser/
   '';
 
   meta = with stdenv.lib; {
@@ -51,6 +52,5 @@ stdenv.mkDerivation rec {
     license = licenses.gpl2Plus;
     maintainers = [ maintainers.goibhniu maintainers.marcweber ];
     platforms = platforms.linux;
-    broken = true;
   };
 }

pkgs/applications/blockchains/lnd.nix

@@ -2,16 +2,16 @@
 
 buildGoModule rec {
   pname = "lnd";
-  version = "0.8.1-beta";
+  version = "0.9.0-beta";
 
   src = fetchFromGitHub {
     owner = "lightningnetwork";
     repo = "lnd";
     rev = "v${version}";
-    sha256 = "0f9fx2y66l3wxiax2vl2966avamjarkv3vbn9dy0wbxkwg4pfayb";
+    sha256 = "1hq105s9ykp6nsn4iicjnl3mwspqkbfsswkx7sgzv3jggg08fkq9";
   };
 
-  modSha256 = "1i6xw2amkg4azvzybcl4pqxif9c0mv8ayrhz9hm8x85bz7i6a787";
+  modSha256 = "1pvcvpiz6ck8xkgpypchrq9kgkik0jxd7f3jhihbgldsh4zaqiaq";
 
   meta = with lib; {
     description = "Lightning Network Daemon";

pkgs/applications/editors/vscode/vscode.nix

@@ -11,15 +11,15 @@ let
   archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz";
 
   sha256 = {
-    x86_64-linux = "1bb7icdjzprrsxllx2q478m1p3qf5sbs3rs3bavvb3hzyyf4bifn";
+    x86_64-linux = "0c067qp3aa5kqya3y8pzc9cvyzsafizhgjp9dsibnfl08lvz9hbs";
-    x86_64-darwin = "1hqpfmp5s135kb9777s96sr0zbls002h1980qbgf7r2hmc0mpnx0";
+    x86_64-darwin = "0vi94nk8p3vp30nx60mwqcmfqbrmrqwvfdjbah0zm480dcjzz7dv";
   }.${system};
 in
   callPackage ./generic.nix rec {
     # The update script doesn't correctly change the hash for darwin, so please:
     # nixpkgs-update: no auto update
 
-    version = "1.42.0";
+    version = "1.42.1";
     pname = "vscode";
 
     executableName = "code" + lib.optionalString isInsiders "-insiders";

pkgs/applications/editors/vscode/vscodium.nix

@@ -11,8 +11,8 @@ let
   archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz";
 
   sha256 = {
-    x86_64-linux = "0f6ic24w6s9wfirzk5rvysn96gj1naj6b81al9743mllaf32ad5q";
+    x86_64-linux = "1pac3rv7ps23ymynvy8dwd5k2154aln33ksr75z1d8w859x3f1dy";
-    x86_64-darwin = "0fgyhb2wxkvrc90zzw5w2k3ggwbinmax286gbff3sjlrzbs5sj64";
+    x86_64-darwin = "1imzgqynbd65c7gbfp2gb1cxjbazx7afvbdvbqnm5qg7pvq22rni";
   }.${system};
 
   sourceRoot = {
@@ -25,7 +25,7 @@ in
     # The update script doesn't correctly change the hash for darwin, so please:
     # nixpkgs-update: no auto update
 
-    version = "1.42.0";
+    version = "1.42.1";
     pname = "vscodium";
 
     executableName = "codium";

pkgs/applications/graphics/avocode/default.nix

@@ -5,11 +5,11 @@
 
 stdenv.mkDerivation rec {
   pname = "avocode";
-  version = "4.2.2";
+  version = "4.3.0";
 
   src = fetchurl {
     url = "https://media.avocode.com/download/avocode-app/${version}/avocode-${version}-linux.zip";
-    sha256 = "0f4cmai2d1x7wbqllxp9na6gxgqfxqav8n4g9azyvm6ymd8zjnx8";
+    sha256 = "0ifb4nsh1mw61gb0hqphr1fmdkq1rjbrvvc9hvpclqg7wc7awids";
   };
 
   libPath = stdenv.lib.makeLibraryPath (with xorg; [

pkgs/applications/kde/kdepim-runtime/00-no-facebook.patch

@@ -1,12 +0,0 @@
-diff --git a/resources/CMakeLists.txt b/resources/CMakeLists.txt
-index 99f7dbf..03e953b 100644
---- a/resources/CMakeLists.txt
-+++ b/resources/CMakeLists.txt
-@@ -45,7 +45,6 @@ add_subdirectory( imap )
- if (Libkolabxml_FOUND)
-     add_subdirectory( kolab )
- endif()
--add_subdirectory( facebook )
- add_subdirectory( maildir )
- 
- add_subdirectory( openxchange )

pkgs/applications/kde/kdepim-runtime/default.nix

@@ -14,7 +14,6 @@ mkDerivation {
     license = with lib.licenses; [ gpl2 lgpl21 fdl12 ];
     maintainers = kdepimTeam;
   };
-  patches = copyPathsToStore (lib.readPathsFromFile ./. ./series);
   nativeBuildInputs = [ extra-cmake-modules kdoctools shared-mime-info ];
   buildInputs = [
     akonadi akonadi-calendar akonadi-contacts akonadi-mime akonadi-notes
@@ -22,6 +21,4 @@ mkDerivation {
     kmailtransport kmbox kmime knotifications knotifyconfig qtwebengine
     pimcommon libkgapi qtnetworkauth qtspeech qtxmlpatterns
   ];
-  # Attempts to build some files before dependencies have been generated
-  enableParallelBuilding = false;
 }

pkgs/applications/kde/kdepim-runtime/series

@@ -1 +0,0 @@
-00-no-facebook.patch

pkgs/applications/misc/alacritty/default.nix

@@ -62,10 +62,7 @@ in buildRustPackage rec {
     sha256 = "05jcg33ifngpzw2hdhgb614j87ihhhlqgar0kky183rywg0dxikg";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "182j8ah67b2gw409vjfml3p41i00zh0klx9m8bwfkm64y2ki2bip";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1kc9n10kb4j87x337pzl6wpi0qj5ib2mqmrjag2yld3138dag71n";
 
   nativeBuildInputs = [
     cmake

pkgs/applications/misc/doomseeker/default.nix

@@ -1,6 +1,6 @@
-{ stdenv, cmake, fetchFromBitbucket, pkgconfig, qtbase, qttools, qtmultimedia, zlib, bzip2, xxd }:
+{ stdenv, mkDerivation, cmake, fetchFromBitbucket, pkgconfig, qtbase, qttools, qtmultimedia, zlib, bzip2, xxd }:
 
-stdenv.mkDerivation {
+mkDerivation {
   pname = "doomseeker";
   version = "2018-03-05";
 
@@ -13,13 +13,10 @@ stdenv.mkDerivation {
 
   patches = [ ./fix_paths.patch ./qt_build_fix.patch ];
 
+  nativeBuildInputs = [ cmake qttools pkgconfig xxd ];
   buildInputs = [ qtbase qtmultimedia zlib bzip2 ];
 
-  nativeBuildInputs = [ cmake qttools pkgconfig xxd ];
+  hardeningDisable = stdenv.lib.optional stdenv.isDarwin "format";
-
-  enableParallelBuilding = true;
-
-  NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.cc.isClang "-Wno-error=format-security";
 
   meta = with stdenv.lib; {
     homepage = http://doomseeker.drdteam.org/;

pkgs/applications/misc/mbutil/default.nix

@@ -0,0 +1,24 @@
+{ lib, buildPythonApplication, fetchFromGitHub, nose }:
+
+buildPythonApplication rec {
+  pname = "mbutil";
+  version = "0.3.0";
+
+  src = fetchFromGitHub {
+    owner = "mapbox";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "06d62r89h026asaa4ryzb23m86j0cmbvy54kf4zl5f35sgiha45z";
+  };
+
+  checkInputs = [ nose ];
+  checkPhase = "nosetests";
+
+  meta = with lib; {
+    description = "An importer and exporter for MBTiles";
+    homepage = "https://github.com/mapbox/mbutil";
+    license = licenses.bsd3;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ sikmir ];
+  };
+}

pkgs/applications/misc/moolticute/default.nix

@@ -1,36 +1,44 @@
-{ stdenv, fetchurl
+{ lib, mkDerivation, fetchFromGitHub
-, libusb1, pkgconfig, qmake, qtbase, qttools, qtwebsockets
+, libusb1
+, pkg-config
+, qmake
+, qtbase
+, qttools
+, qtwebsockets
 }:
 
-stdenv.mkDerivation rec {
+mkDerivation rec {
   pname = "moolticute";
-  version = "0.30.8";
+  version = "0.42.32-testing";
 
-  src = fetchurl {
+  src = fetchFromGitHub {
-    url = "https://github.com/mooltipass/moolticute/archive/v${version}.tar.gz";
+    owner = "mooltipass";
-    sha256 = "1qi18r2v0mpw1y007vjgzhiia89fpgsbg2wirxgngl21yxdns1pf";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "1kx1p2h65dilj1pbzf36d1mxwym19kvln1sqg8fb7na8q7lk4b05";
   };
 
+  outputs = [ "out" "udev" ];
+
+  nativeBuildInputs = [ pkg-config qmake qttools ];
+  buildInputs = [ libusb1 qtbase qtwebsockets ];
+
   preConfigure = "mkdir -p build && cd build";
-  nativeBuildInputs = [ pkgconfig qmake qttools ];
   qmakeFlags = [ "../Moolticute.pro" ];
 
-  outputs = [ "out" "udev" ];
   preInstall = ''
     mkdir -p $udev/lib/udev/rules.d
     sed -n '/^ \+cat > "$tmpfile" <<- EOF$/,/^EOF$/p' ../data/moolticute.sh |
         sed '1d;$d' > $udev/lib/udev/rules.d/50-mooltipass.rules
  '';
 
-  buildInputs = [ libusb1 qtbase qtwebsockets ];
+  meta = with lib; {
-
-  meta = with stdenv.lib; {
     description = "GUI app and daemon to work with Mooltipass device via USB";
     longDescription = ''
       To install udev rules, add `services.udev.packages == [ moolticute.udev ]`
       into `nixos/configuration.nix`.
     '';
-    homepage = https://github.com/mooltipass/moolticute;
+    homepage = "https://github.com/mooltipass/moolticute";
     license = licenses.gpl3Plus;
     maintainers = [ maintainers.kirikaza ];
     platforms = platforms.linux;

pkgs/applications/misc/pastel/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1c47bph1qraq3g0g5bp23jqlz7qdn4f8vh264y937jz17avvacx5";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1hkqahsrhmgcpgp0pvfpc0wmwqivnqylsxzjrz63k1s9ssdv9syy";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1pfhwqj9kxm9p0mpdw7qyvivgby2bmah05kavf0a5zhzvq4v4sg0";
 
   buildInputs = stdenv.lib.optional stdenv.isDarwin Security;
 

pkgs/applications/misc/rsclock/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1i93qkz6d8sbk78i4rvx099hnn4lklp4cjvanpm9ssv8na4rqvh2";
   };
    
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "01dhkis6zswq1y40n7sdq9xv1sp61f2v7nfqbkicyjngmdrmcgrl";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "03mhlp5hi3nlybb9dkwf1gxgsg056mjq2zsxnb5qh8pdxw7fmdxk";
 
   meta = with stdenv.lib; {
     description = "A simple terminal clock written in Rust";

pkgs/applications/misc/taizen/default.nix

@@ -14,10 +14,7 @@ rustPlatform.buildRustPackage rec {
   buildInputs = [ ncurses openssl ] ++ lib.optional stdenv.isDarwin Security;
   nativeBuildInputs = [ pkgconfig ];
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0chrgwm97y1a3gj218x25yqk1y1h74a6gzyxjdm023msvs58nkni";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0h8ybhb17pqhhfjcmq1l70kp8g1yyq38228lcf86byk3r2ar2rkg";
 
   meta = with lib; {
     homepage = https://crates.io/crates/taizen;

pkgs/applications/misc/todiff/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1y0v8nkaqb8kn61xwarpbyrq019gxx1f5f5p1hzw73nqxadc1rcm";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1vyc230a2b0dry2057mkdkrjb7s9d0p43fnz4q67aqrpyr4jxwx2";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0xn5p71qk0ahd2drklja16xwv7zw0797kkzpiv563kffzvd1p8id";
 
   checkPhase = "cargo test --features=integration_tests";
 

pkgs/applications/networking/cluster/terragrunt/default.nix

@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   pname = "terragrunt";
-  version = "0.17.4";
+  version = "0.21.11";
 
   goPackagePath = "github.com/gruntwork-io/terragrunt";
 
@@ -10,7 +10,7 @@ buildGoPackage rec {
     owner  = "gruntwork-io";
     repo   = "terragrunt";
     rev    = "v${version}";
-    sha256 = "13hlv0ydmv8gpzgg6bfr7rp89xfw1bkgd0j684armw8zq29cmv3a";
+    sha256 = "1w64skk67i0sxjd2mkyqh3nglc32wc7schk7h8fwszpa1rw4dfcn";
   };
 
   goDeps = ./deps.nix;
@@ -18,6 +18,7 @@ buildGoPackage rec {
   buildInputs = [ makeWrapper ];
 
   preBuild = ''
+    find go/src -name vendor | xargs -I % sh -c 'echo Removing %; rm -rf %'
     buildFlagsArray+=("-ldflags" "-X main.VERSION=v${version}")
   '';
 

pkgs/applications/networking/cluster/terragrunt/deps.nix

@@ -1,12 +1,48 @@
-# This file was generated by https://github.com/kamilchm/go2nix v1.2.1
+# file generated from Gopkg.lock using dep2nix (https://github.com/nixcloud/dep2nix)
 [
+  {
+    goPackagePath  = "cloud.google.com/go";
+    fetch = {
+      type = "git";
+      url = "https://code.googlesource.com/gocloud";
+      rev =  "28a4bc8c44b3acbcc482cff0cdf7de29a4688b61";
+      sha256 = "0j40msxm72m8gs87rpwkk19iagjj387r42xwxszmrna7il8g0sbl";
+    };
+  }
+  {
+    goPackagePath  = "github.com/agext/levenshtein";
+    fetch = {
+      type = "git";
+      url = "https://github.com/agext/levenshtein";
+      rev =  "0ded9c86537917af2ff89bc9c78de6bd58477894";
+      sha256 = "19d7q69yhcg7gl81j038rkbjz8yjb4qwnsqrmxa4zvhgzlc7d130";
+    };
+  }
+  {
+    goPackagePath  = "github.com/apparentlymart/go-cidr";
+    fetch = {
+      type = "git";
+      url = "https://github.com/apparentlymart/go-cidr";
+      rev =  "b1115bf8e14a60131a196f908223e4506b0ddc35";
+      sha256 = "0r938rb18c9cr2k417cwwd4pfq74aabpjp9pzvk4qkxc5279igl3";
+    };
+  }
+  {
+    goPackagePath  = "github.com/apparentlymart/go-textseg";
+    fetch = {
+      type = "git";
+      url = "https://github.com/apparentlymart/go-textseg";
+      rev =  "fb01f485ebef760e5ee06d55e1b07534dda2d295";
+      sha256 = "0n9xcyj7p5y8mbqilk9zprfyqvgm2y9f1g440wqw9dnn3s4fi1k4";
+    };
+  }
   {
     goPackagePath  = "github.com/aws/aws-sdk-go";
     fetch = {
       type = "git";
       url = "https://github.com/aws/aws-sdk-go";
-      rev = "25253087ea42da08900c4c1fc34c04bdb4a97d5a";
+      rev =  "572908275ed4e38fef7ccb7d507f2faacaa7ab36";
-      sha256 = "0p6mf53f4l9b26yc4qlm1s7yls73hsw8klyfhmnxhk2mq8k6ix4m";
+      sha256 = "07bn3v0c4pd38qdp0a0kgmsvh7q30f14qp7pbbls3jzmvpxh49zs";
     };
   }
   {
@@ -18,6 +54,42 @@
       sha256 = "0dn2h8avgavqdzdqnph8bkhj35bx0wssczry1zdczr22xv650g1l";
     };
   }
+  {
+    goPackagePath  = "github.com/bmatcuk/doublestar";
+    fetch = {
+      type = "git";
+      url = "https://github.com/bmatcuk/doublestar";
+      rev =  "2437321e1473408f122a95f65df3d8841fec4fba";
+      sha256 = "0z1jg4l746825qs95sffbc69av1yj0l37n8rjmmnwf7hxh5glxzp";
+    };
+  }
+  {
+    goPackagePath  = "github.com/creack/pty";
+    fetch = {
+      type = "git";
+      url = "https://github.com/creack/pty";
+      rev =  "3a6a957789163cacdfe0e291617a1c8e80612c11";
+      sha256 = "1v52599qq76dwq742mffakzj6mxqqccv2szn3hjicjld56nmd2d3";
+    };
+  }
+  {
+    goPackagePath  = "github.com/davecgh/go-spew";
+    fetch = {
+      type = "git";
+      url = "https://github.com/davecgh/go-spew";
+      rev =  "8991bc29aa16c548c550c7ff78260e27b9ab7c73";
+      sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y";
+    };
+  }
+  {
+    goPackagePath  = "github.com/fatih/color";
+    fetch = {
+      type = "git";
+      url = "https://github.com/fatih/color";
+      rev =  "5b77d2a35fb0ede96d138fc9a99f5c9b6aef11b4";
+      sha256 = "0v8msvg38r8d1iiq2i5r4xyfx0invhc941kjrsg5gzwvagv55inv";
+    };
+  }
   {
     goPackagePath  = "github.com/go-errors/errors";
     fetch = {
@@ -27,13 +99,67 @@
       sha256 = "0rznpknk19rxkr7li6dqs52c26pjazp69lh493l4ny4sxn5922lp";
     };
   }
+  {
+    goPackagePath  = "github.com/golang/protobuf";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/protobuf";
+      rev =  "b5d812f8a3706043e23a9cd5babf2e5423744d30";
+      sha256 = "15am4s4646qy6iv0g3kkqq52rzykqjhm4bf08dk0fy2r58knpsyl";
+    };
+  }
+  {
+    goPackagePath  = "github.com/google/go-cmp";
+    fetch = {
+      type = "git";
+      url = "https://github.com/google/go-cmp";
+      rev =  "6f77996f0c42f7b84e5a2b252227263f93432e9b";
+      sha256 = "1hyxx3434zshl2m9ja78gwlkg1rx9yl6diqa7dnjb31xz5x4gbjj";
+    };
+  }
+  {
+    goPackagePath  = "github.com/google/uuid";
+    fetch = {
+      type = "git";
+      url = "https://github.com/google/uuid";
+      rev =  "0cd6bf5da1e1c83f8b45653022c74f71af0538a4";
+      sha256 = "0hfxcf9frkb57k6q0rdkrmnfs78ms21r1qfk9fhlqga2yh5xg8zb";
+    };
+  }
+  {
+    goPackagePath  = "github.com/googleapis/gax-go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/googleapis/gax-go";
+      rev =  "beaecbbdd8af86aa3acf14180d53828ce69400b2";
+      sha256 = "1iwnm6ky1x53lgs44mw3hpdkjzrm5qd0kfs50m0qcq2ml5m1cwdm";
+    };
+  }
+  {
+    goPackagePath  = "github.com/gruntwork-io/terratest";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gruntwork-io/terratest";
+      rev =  "a02960d4ef0711ae95ae2651271b4e073f88da4e";
+      sha256 = "0mywsimj8if8j2jbp8sf4igl5lcdlj81hd3lif86fsmyrma090vw";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/errwrap";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/errwrap";
+      rev =  "8a6fb523712970c966eefc6b39ed2c5e74880354";
+      sha256 = "0slfb6w3b61xz04r32bi0a1bygc82rjzhqkxj2si2074wynqnr1c";
+    };
+  }
   {
     goPackagePath  = "github.com/hashicorp/go-cleanhttp";
     fetch = {
       type = "git";
       url = "https://github.com/hashicorp/go-cleanhttp";
-      rev = "d5fe4b57a186c716b0e00b8c301cbd9b4182694d";
+      rev =  "eda1e5db218aad1db63ca4642c8906b26bcf2744";
-      sha256 = "1m20y90syky4xr81sm3980jpil81nnpzmi6kv0vjr6p584gl1hn8";
+      sha256 = "07kx3fhryqmaw3czacmm11qwx63js2q8cfq967vphk7xg9q377kk";
     };
   }
   {
@@ -41,8 +167,35 @@
     fetch = {
       type = "git";
       url = "https://github.com/hashicorp/go-getter";
-      rev = "64040d90d4ab861e7e833d689dc76a0f176d8dec";
+      rev =  "f9ec369200fd2163b8f452e5e45696d83ae3f4b6";
-      sha256 = "0g25nx42z6ykd7jqzlrxf161h8lqrpxpddmbspl4w3a84wphhgms";
+      sha256 = "1h69946nsmpp06iqg85whwvjrfqlk1gf9q7y01f0r3sf0cb28f30";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/go-multierror";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/go-multierror";
+      rev =  "886a7fbe3eb1c874d46f623bfa70af45f425b3d1";
+      sha256 = "00nyn8llqzbfm8aflr9kwsvpzi4kv8v45c141v88xskxp5xf6z49";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/go-safetemp";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/go-safetemp";
+      rev =  "c9a55de4fe06c920a71964b53cfe3dd293a3c743";
+      sha256 = "0gydks8bkq88adlzmv8qj3rvljx15j94c8lyrp88ji2jn6dvv643";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/go-uuid";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/go-uuid";
+      rev =  "4f571afc59f3043a65f8fe6bf46d887b10a01d43";
+      sha256 = "0jvb88m0rq41bwgirsadgw7mnayl27av3gd2vqa3xvxp3fy0hp5k";
     };
   }
   {
@@ -50,17 +203,62 @@
     fetch = {
       type = "git";
       url = "https://github.com/hashicorp/go-version";
-      rev = "23480c0665776210b5fbbac6eaaee40e3e6a96b7";
+      rev =  "ac23dc3fea5d1a983c43f6a0f6e2c13f0195d8bd";
-      sha256 = "056zs67diq3m7skmmq3pnz6wymfcg55dfs5zf86xkfqqpj10kyf7";
+      sha256 = "1bwi6y6111xq8ww8kjq0w1cmz15l1h9hb2id6596l8l0ag1vjj1z";
     };
   }
   {
-    goPackagePath = "github.com/hashicorp/hcl";
+    goPackagePath  = "github.com/hashicorp/golang-lru";
     fetch = {
       type = "git";
-      url = "https://github.com/hashicorp/hcl";
+      url = "https://github.com/hashicorp/golang-lru";
-      rev = "f40e974e75af4e271d97ce0fc917af5898ae7bda";
+      rev =  "7087cb70de9f7a8bc0a10c375cb0d2280a8edf9c";
-      sha256 = "1w5w3m40xv85gngw8g1kjbcgah1vl4ardbpg2cxgj1svf80zazxx";
+      sha256 = "13f870cvk161bzjj6x41l45r5x9i1z9r2ymwmvm7768kg08zznpy";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/hcl2";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/hcl2";
+      rev =  "318e80eefe28c3aa01b434c61bcf4c83a0cc6b25";
+      sha256 = "1wlm47qk84ggn6lanafirc49kaq998r1nw2xdcv4ghdxy2ijc0rj";
+    };
+  }
+  {
+    goPackagePath  = "github.com/hashicorp/terraform";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/terraform";
+      rev =  "abec0acf40d8e31ac612a244cf3886fb3bcce0bb";
+      sha256 = "14js4n08rg30y0jrm0na79syglpb64cb7cxys0x3w47pcbgymrka";
+    };
+  }
+  {
+    goPackagePath  = "github.com/jmespath/go-jmespath";
+    fetch = {
+      type = "git";
+      url = "https://github.com/jmespath/go-jmespath";
+      rev =  "c2b33e84";
+      sha256 = "1r6w7ydx8ydryxk3sfhzsk8m6f1nsik9jg3i1zhi69v4kfl4d5cz";
+    };
+  }
+  {
+    goPackagePath  = "github.com/mattn/go-colorable";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mattn/go-colorable";
+      rev =  "167de6bfdfba052fa6b2d3664c8f5272e23c9072";
+      sha256 = "1nwjmsppsjicr7anq8na6md7b1z84l9ppnlr045hhxjvbkqwalvx";
+    };
+  }
+  {
+    goPackagePath  = "github.com/mattn/go-isatty";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mattn/go-isatty";
+      rev =  "e1f7b56ace729e4a73a29a6b4fac6cd5fcda7ab3";
+      sha256 = "0i3km37lajahh1y2392g4hpgvq05arcgiiv93yhzxxyv0fpqj72m";
     };
   }
   {
@@ -68,8 +266,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/mattn/go-zglob";
-      rev = "4959821b481786922ac53e7ef25c61ae19fb7c36";
+      rev =  "2ea3427bfa539cca900ca2768d8663ecc8a708c1";
-      sha256 = "0rwkdw143kphpmingsrw1zp030zf3p08f64h347jpdm4lz8z5449";
+      sha256 = "1sncdyq5fbd42al4amyy91h7vlzm3wm6c9vl8za2pjgfgsd581fz";
     };
   }
   {
@@ -77,8 +275,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/mitchellh/go-homedir";
-      rev = "b8bc1bf767474819792c23f32d8286a45736f1c6";
+      rev =  "af06845cf3004701891bf4fdb884bfe4920b3727";
-      sha256 = "13ry4lylalkh4g2vny9cxwvryslzyzwp9r92z0b10idhdq3wad1q";
+      sha256 = "0ydzkipf28hwj2bfxqmwlww47khyk6d152xax4bnyh60f4lq3nx1";
     };
   }
   {
@@ -86,8 +284,17 @@
     fetch = {
       type = "git";
       url = "https://github.com/mitchellh/go-testing-interface";
-      rev = "a61a99592b77c9ba629d254a693acffaeb4b7e28";
+      rev =  "6d0b8010fcc857872e42fc6c931227569016843c";
-      sha256 = "139hq835jpgk9pjg94br9d08nka8bfm7zyw92zxlwrkska4pgigx";
+      sha256 = "1dl2js8di858bawg7dadlf1qjpkl2g3apziihjyf5imri3znyfpw";
+    };
+  }
+  {
+    goPackagePath  = "github.com/mitchellh/go-wordwrap";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mitchellh/go-wordwrap";
+      rev =  "9e67c67572bc5dd02aef930e2b0ae3c02a4b5a5c";
+      sha256 = "1jffbwcr3nnq6c12c5856bwzv2nxjzqk3jwgvxkwi1xhpd2by0bf";
     };
   }
   {
@@ -95,8 +302,17 @@
     fetch = {
       type = "git";
       url = "https://github.com/mitchellh/mapstructure";
-      rev = "00c29f56e2386353d58c599509e8dc3801b0d716";
+      rev =  "3536a929edddb9a5b34bd6861dc4a9647cb459fe";
-      sha256 = "1vw8fvhax0d567amgvxr7glcl12lvzg2sbzs007q5k5bbwn1szyb";
+      sha256 = "03bpv28jz9zhn4947saqwi328ydj7f6g6pf1m2d4m5zdh5jlfkrr";
+    };
+  }
+  {
+    goPackagePath  = "github.com/pmezard/go-difflib";
+    fetch = {
+      type = "git";
+      url = "https://github.com/pmezard/go-difflib";
+      rev =  "792786c7400a136282c1664665ae0a8db921c6c2";
+      sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw";
     };
   }
   {
@@ -104,8 +320,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/stretchr/testify";
-      rev = "c679ae2cc0cb27ec3293fea7e254e47386f05d69";
+      rev =  "ffdc059bfe9ce6a4e144ba849dbedead332c6053";
-      sha256 = "1rrdn7k83j492rzhqwkh6956sj8m2nbk44d7r1xa9nsn3hfwj691";
+      sha256 = "0wjchp2c8xbgcbbq32w3kvblk6q6yn533g78nxl6iskq6y95lxsy";
     };
   }
   {
@@ -113,8 +329,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/ulikunitz/xz";
-      rev = "0c6b41e72360850ca4f98dc341fd999726ea007f";
+      rev =  "6f934d456d51e742b4eeab20d925a827ef22320a";
-      sha256 = "0a6l7sp67ipxim093qh6fvw8knbxj24l7bj5lykcddi5gwfi78n3";
+      sha256 = "1qpk02c0nfgfyg110nmbaiy5x12fpn0pm8gy7h1s8pwns133n831";
     };
   }
   {
@@ -122,8 +338,116 @@
     fetch = {
       type = "git";
       url = "https://github.com/urfave/cli";
-      rev = "8e01ec4cd3e2d84ab2fe90d8210528ffbb06d8ff";
+      rev =  "cfb38830724cc34fedffe9a2a29fb54fa9169cd1";
-      sha256 = "0cpr10n4ps3gcdbcink71ry9hzhdb5rrcysmylybs8h2lzxqgc1i";
+      sha256 = "0y6f4sbzkiiwrxbl15biivj8c7qwxnvm3zl2dd3mw4wzg4x10ygj";
+    };
+  }
+  {
+    goPackagePath  = "github.com/zclconf/go-cty";
+    fetch = {
+      type = "git";
+      url = "https://github.com/zclconf/go-cty";
+      rev =  "6fd39ad70c3a6bbdb1b4e47444e4cce72f901200";
+      sha256 = "0mb0ws70jg93vlamzhdvyvyfq6x0s0ll5gf44yanb1dhlz6i1f90";
+    };
+  }
+  {
+    goPackagePath  = "github.com/zclconf/go-cty-yaml";
+    fetch = {
+      type = "git";
+      url = "https://github.com/zclconf/go-cty-yaml";
+      rev =  "bc34c981dadb5ed30af852693e3aba8fb6546f42";
+      sha256 = "0dams5g61n88rk7zq7sy0yap873ksjafhf81hn2fg2dpfjhcd3y2";
+    };
+  }
+  {
+    goPackagePath  = "go.opencensus.io";
+    fetch = {
+      type = "git";
+      url = "https://github.com/census-instrumentation/opencensus-go";
+      rev =  "9c377598961b706d1542bd2d84d538b5094d596e";
+      sha256 = "05jr8gkr2w34i5wwki4zhl5ch0qrgi7cdgag5iy5gpxplhbrvbg9";
+    };
+  }
+  {
+    goPackagePath  = "golang.org/x/crypto";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/crypto";
+      rev =  "5c40567a22f818bd14a1ea7245dad9f8ef0691aa";
+      sha256 = "17g8fb9vy2sqq8vgz8jdvf6c6d2290gm2qs0i4yzsd86mgn4dlrg";
+    };
+  }
+  {
+    goPackagePath  = "golang.org/x/net";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/net";
+      rev =  "461777fb6f67e8cb9d70cda16573678d085a74cf";
+      sha256 = "0sc0llch05q6h7nqgayi3sgismsznpnlsz4gh89y4klpymdcpbh2";
+    };
+  }
+  {
+    goPackagePath  = "golang.org/x/oauth2";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/oauth2";
+      rev =  "0f29369cfe4552d0e4bcddc57cc75f4d7e672a33";
+      sha256 = "06jwpvx0x2gjn2y959drbcir5kd7vg87k0r1216abk6rrdzzrzi2";
+    };
+  }
+  {
+    goPackagePath  = "golang.org/x/sys";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/sys";
+      rev =  "93c9922d18aeb82498a065f07aec7ad7fa60dfb7";
+      sha256 = "0hv96nwbv0li3nrv43ldfzmf12yrrbji2cf8n44iibv8ps5kfssx";
+    };
+  }
+  {
+    goPackagePath  = "golang.org/x/text";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/text";
+      rev =  "342b2e1fbaa52c93f31447ad2c6abc048c63e475";
+      sha256 = "0flv9idw0jm5nm8lx25xqanbkqgfiym6619w575p7nrdh0riqwqh";
+    };
+  }
+  {
+    goPackagePath  = "google.golang.org/api";
+    fetch = {
+      type = "git";
+      url = "https://code.googlesource.com/google-api-go-client";
+      rev =  "890e5eb51fe205e56dc55eb68d63e82039730816";
+      sha256 = "05r2wsjnmszsz4y59w8q6qknc7zq1mc56kya61i2133dqxyc55ai";
+    };
+  }
+  {
+    goPackagePath  = "google.golang.org/appengine";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/appengine";
+      rev =  "b2f4a3cf3c67576a2ee09e1fe62656a5086ce880";
+      sha256 = "0zxlvwzxwkwz4bs4h9zc9979dx76y4xf9ks4d22bclg47dv59yry";
+    };
+  }
+  {
+    goPackagePath  = "google.golang.org/genproto";
+    fetch = {
+      type = "git";
+      url = "https://github.com/google/go-genproto";
+      rev =  "eb0b1bdb6ae60fcfc41b8d907b50dfb346112301";
+      sha256 = "0g00wfxd4z886bglyszcvfpgzak0476axqyfaqv3va62ndbqpk90";
+    };
+  }
+  {
+    goPackagePath  = "google.golang.org/grpc";
+    fetch = {
+      type = "git";
+      url = "https://github.com/grpc/grpc-go";
+      rev =  "501c41df7f472c740d0674ff27122f3f48c80ce7";
+      sha256 = "0hla9rjvyi6wjak4cw39ic8jkdcd0lsymhrz9sa52bfybxsczf38";
     };
   }
 ]

pkgs/applications/networking/instant-messengers/fractal/default.nix

@@ -35,10 +35,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0r98km3c8naj3mdr1wppzj823ir7jnsia7r3cbg3vsq8q52i480r";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "10fgw9m6gdazrca73g43sgvsghhac7xc3bg7hr0vpynzqyfigwa9";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1n9n4d057cz44sh1iy2hb2adplhnrhvr8drnp0v2h8yw73a5shvv";
 
   nativeBuildInputs = [
     cargo

pkgs/applications/networking/nextcloud-client/default.nix

@@ -17,13 +17,13 @@
 
 mkDerivation rec {
   pname = "nextcloud-client";
-  version = "2.6.2";
+  version = "2.6.3";
 
   src = fetchFromGitHub {
     owner = "nextcloud";
     repo = "desktop";
     rev = "v${version}";
-    sha256 = "1adicl0msjwbvvi0nxqb1zmka51nn2b88plsynrap5fm0xp40j39";
+    sha256 = "17w1bx305w656jkiv55lwncxwdly8rf2dsisqw3c9bc7vz19l6p8";
   };
 
   patches = [

pkgs/applications/office/atlassian-cli/default.nix

@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   pname = "atlassian-cli";
-  version = "9.1.0";
+  version = "9.1.1";
   
   src = fetchzip {
     url  = "https://bobswift.atlassian.net/wiki/download/attachments/16285777/${pname}-${version}-distribution.zip";
-    sha256  = "06431nmz2k1d7vdpnyr88j777sfaa0vrfvxbr9zikn65176mkw7k";
+    sha256  = "0mdf4ybp0a6c816210g76lx901qwxw727ipyiph5kbdzl4jlrpgm";
     extraPostFetch = "chmod go-w $out";
   };
   

pkgs/applications/office/homebank/default.nix

@@ -2,10 +2,10 @@
 , libsoup, gnome3 }:
 
 stdenv.mkDerivation rec {
-  name = "homebank-5.3.1";
+  name = "homebank-5.3.2";
   src = fetchurl {
     url = "http://homebank.free.fr/public/${name}.tar.gz";
-    sha256 = "119lyr8c33n8sa3s4l8s33ajwhyv0qgpmaigkyaqnccbkw1qdhhv";
+    sha256 = "1fr4060yqlciay98dypvifmfvr8y2kbpj89d86mcvq9gb00vij2b";
   };
 
   nativeBuildInputs = [ pkgconfig wrapGAppsHook ];

pkgs/applications/office/qownnotes/default.nix

@@ -2,13 +2,13 @@
 
 mkDerivation rec {
   pname = "qownnotes";
-  version = "19.12.15";
+  version = "20.2.5";
 
   src = fetchurl {
     url = "https://download.tuxfamily.org/${pname}/src/${pname}-${version}.tar.xz";
     # Can grab official version like so:
-    # $ curl https://download.tuxfamily.org/qownnotes/src/qownnotes-19.1.8.tar.xz.sha256
+    # $ curl https://download.tuxfamily.org/qownnotes/src/qownnotes-20.2.5.tar.xz.sha256
-    sha256 = "11i3cn1j365nwinaksfpi1hn7j6bqgjzhawkl6c294lzahngba9w";
+    sha256 = "c26d2a86a521cd243ec0a4788e7627e91cb5877dace73d93dd7d35dd02e9e4c5";
   };
 
   nativeBuildInputs = [ qmake qttools ];

pkgs/applications/office/softmaker/softmaker_office.nix

@@ -2,13 +2,13 @@
 
 callPackage ./generic.nix (args // rec {
   pname = "softmaker-office";
-  version = "972";
+  version = "974";
   edition = "2018";
   suiteName = "SoftMaker Office";
 
   src = fetchurl {
     url = "https://www.softmaker.net/down/softmaker-office-${edition}-${version}-amd64.tgz";
-    sha256 = "06kgkmqg5269a4vm14i89mw8m1x9yy9ajw0dhfcvjizadyzmlqn1";
+    sha256 = "0z1g76lhja92s25x6y0h55wmqza2d3pjbshn5b9rn2784gjgj7hn";
   };
 
   archive = "office${edition}.tar.lzma";

pkgs/applications/version-management/git-and-tools/default.nix

@@ -44,6 +44,10 @@ let
 
   git-fame = callPackage ./git-fame {};
 
+  git-filter-repo = callPackage ./git-filter-repo {
+    pythonPackages = python3Packages;
+  };
+
   gita = python3Packages.callPackage ./gita {};
 
   # The full-featured Git.

pkgs/applications/version-management/git-and-tools/git-filter-repo/default.nix

@@ -0,0 +1,27 @@
+{ stdenv, fetchurl, pythonPackages }:
+
+stdenv.mkDerivation rec {
+  pname = "git-filter-repo";
+  version = "2.25.0";
+
+  src = fetchurl {
+    url = "https://github.com/newren/git-filter-repo/releases/download/v${version}/${pname}-${version}.tar.xz";
+    sha256 = "1772if8ajaw80dsdw4ic6vjw24dq0b9w87qlkn0iw4b8r9yxp37a";
+  };
+
+  buildInputs = [ pythonPackages.python ];
+
+  dontBuild = true;
+
+  installPhase = ''
+    install -Dm755 -t $out/bin git-filter-repo
+    install -Dm644 -t $out/share/man/man1 Documentation/man1/git-filter-repo.1
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/newren/git-filter-repo";
+    description = "Quickly rewrite git repository history (filter-branch replacement)";
+    license = licenses.mit;
+    maintainers = [ maintainers.marsam ];
+  };
+}

pkgs/applications/version-management/pijul/default.nix

@@ -20,8 +20,18 @@ in rustPlatform.buildRustPackage rec {
     sha256 = "1rm787kkh3ya8ix0rjvj7sbrg9armm0rnpkga6gjmsbg5bx20y4q";
   };
 
+  cargoSha256 = "0rf8qmgzgyl718yznbskzafyg963ygibjmqncd93zdandgl9nj5v";
+
+  # N.B. The cargo depfile checker expects us to have unpacked the src tarball
+  # into the standard dirname "source".
+  cargoDepsHook = ''
+    ln -s ${pname}-${version} source
+  '';
+
+  # TODO: Delete once pijul fixes upstream:
+  # https://nest.pijul.com/pijul_org/pijul/discussions/447
   postPatch = ''
-    pushd ../${pname}-${version}-vendor/thrussh/
+    pushd ../${pname}-${version}-vendor.tar.gz/thrussh/
     patch -p1 < ${./thrussh-build-fix.patch}
     substituteInPlace .cargo-checksum.json --replace \
       9696ed2422a483cd8de48ac241178a0441be6636909c76174c536b8b1cba9d45 \
@@ -45,11 +55,6 @@ in rustPlatform.buildRustPackage rec {
 
   doCheck = false;
 
-  # Delete this on next update; see #79975 for details
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1w77s5q18yr1gqqif15wmrfdvv2chq8rq3w4dnmxg2gn0r7bmz2k";
-
   meta = with stdenv.lib; {
     description = "A distributed version control system";
     homepage = https://pijul.org;

pkgs/applications/video/jftui/default.nix

@@ -0,0 +1,46 @@
+{ stdenv, fetchFromGitHub, fetchpatch, clang,
+  pkg-config, curl, mpv, yajl }:
+
+stdenv.mkDerivation rec {
+  pname = "jftui";
+  version = "0.2.2";
+
+  src = fetchFromGitHub {
+    owner = "Aanok";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0g93w8ahyh2v0cv2fyj5a7v6qyznavwk0dcxx1qw4kczdgmlxnkx";
+  };
+
+  patches = [
+    # Remove this patch with next version
+    (fetchpatch {
+      name = "curl-capability-check-fix";
+      url = "https://github.com/Aanok/jftui/commit/d63996b8bc0d2ac4b04c5de4169bc7f8ec9b2a30.patch";
+      sha256 = "1d595mkzgx3carq2cykxpvmf5klgdlyaq94fk9wj8812yswqlsr7";
+    })
+  ];
+
+  nativeBuildInputs = [
+    pkg-config
+  ];
+
+  buildInputs = [
+    clang
+    curl
+    mpv
+    yajl
+  ];
+
+  installPhase = ''
+    install -Dm555 build/jftui $out/bin/jftui
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Jellyfin Terminal User Interface ";
+    homepage = "https://github.com/Aanok/jftui";
+    license = licenses.unlicense;
+    maintainers = [ maintainers.nyanloutre ];
+    platforms = platforms.linux;
+  };
+}

pkgs/applications/virtualization/cntr/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0dhfz7aj3cqi974ybf0axchih40rzrs9m8bxhwz1hgig57aisfc0";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "088drkpkgq8psv5j6igxyhfvvbalzg6nd98r9z0nxkawck5i2clz";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0xkwza9fx61pvlsm0s3dxc9i09mqp6c9df8w63fyiq7174vjxryx";
 
   meta = with stdenv.lib; {
     description = "A container debugging tool based on FUSE";

pkgs/data/fonts/iosevka/default.nix

@@ -69,7 +69,7 @@ stdenv.mkDerivation rec {
 
   buildPhase = ''
     runHook preBuild
-    npm run build -- ttf::$pname
+    npm run build -- ttf::$pname >/dev/null
     runHook postBuild
   '';
 

pkgs/data/fonts/spleen/default.nix

@@ -2,7 +2,7 @@
 
 let
   pname = "spleen";
-  version = "1.6.0";
+  version = "1.7.0";
 in fetchurl {
   name = "${pname}-${version}";
   url = "https://github.com/fcambus/spleen/releases/download/${version}/spleen-${version}.tar.gz";
@@ -19,7 +19,7 @@ in fetchurl {
     # create fonts.dir so NixOS xorg module adds to fp
     ${mkfontscale}/bin/mkfontdir "$d"
   '';
-  sha256 = "0x1xiw4gyfkyvwqg0f47rl92zq76d0c6jfncdnq8m2wwpxz9697b";
+  sha256 = "17dn6spfr8wv63sy009djb4q12q635m13wsyirzn074qabhr9ggg";
 
   meta = with lib; {
     description = "Monospaced bitmap fonts";

pkgs/data/themes/pop-gtk/default.nix

@@ -13,13 +13,13 @@
 
 stdenv.mkDerivation rec {
   pname = "pop-gtk-theme";
-  version = "2019-12-17";
+  version = "2020-02-10";
 
   src = fetchFromGitHub {
     owner = "pop-os";
     repo = "gtk-theme";
-    rev = "77601545f049251bce9c63a07f0d9819aa27cb60";
+    rev = "ed888e9dd5de142cb899e362beedaf694594cc7e";
-    sha256 = "0bmkcdr1z9m3inrw33zprq2a4jawql4724a84nr89r19xllj2z1s";
+    sha256 = "0ryr1jx9pzij6pkv7sam07f90w5lbrzx0fj5vdxl94612mh76aad";
   };
 
   nativeBuildInputs = [

pkgs/development/compilers/edk2/default.nix

@@ -14,13 +14,13 @@ else
 
 edk2 = stdenv.mkDerivation {
   pname = "edk2";
-  version = "201905";
+  version = "201911";
 
   # submodules
   src = fetchgit {
     url = "https://github.com/tianocore/edk2";
     rev = "edk2-stable${edk2.version}";
-    sha256 = "0fk40h4nj4qg8shg0yd1zj4iyspslms5fx95ysi04akv90k5sqkn";
+    sha256 = "1rmvb4w043v25cppsqxqrpzqqcay3yrzsrhhzm2q9bncrj56vm8q";
   };
 
   buildInputs = [ libuuid pythonEnv ];

pkgs/development/interpreters/racket/default.nix

@@ -46,7 +46,7 @@ in
 
 stdenv.mkDerivation rec {
   pname = "racket";
-  version = "7.5"; # always change at once with ./minimal.nix
+  version = "7.6"; # always change at once with ./minimal.nix
 
   src = (stdenv.lib.makeOverridable ({ name, sha256 }:
     fetchurl {
@@ -55,7 +55,7 @@ stdenv.mkDerivation rec {
     }
   )) {
     name = "${pname}-${version}";
-    sha256 = "0b74v0pqkx57x2gk0m4sp94jaf6bi1mci4ix9vx4sh2442sbds1j";
+    sha256 = "0yagy7qrnz96gwafnj3whh2vs54788k1ci3vkm100h68gsw638b8";
   };
 
   FONTCONFIG_FILE = fontsConf;

pkgs/development/interpreters/racket/minimal.nix

@@ -5,7 +5,7 @@ racket.overrideAttrs (oldAttrs: rec {
   name = "racket-minimal-${oldAttrs.version}";
   src = oldAttrs.src.override {
     inherit name;
-    sha256 = "0478f0phkjch10ncsl8lm8a1m8qvgchrkgzpcaxyhmg2clyjgn8r";
+    sha256 = "0id094q9024hj2n3907l7dblp3iix1v5289xzskmh5c26xfygp9y";
   };
 
   meta = oldAttrs.meta // {

pkgs/development/interpreters/wasm-gc/default.nix

@@ -1,28 +0,0 @@
-{ stdenv, fetchFromGitHub, rustPlatform }:
-
-rustPlatform.buildRustPackage rec {
-  pname = "wasm-gc";
-  version = "0.1.6";
-
-  src = fetchFromGitHub {
-    owner = "alexcrichton";
-    repo = "wasm-gc";
-    rev = version;
-    sha256 = "1lc30xxqp3vv1r269xzznh2lf2dzdq89bi5f1vmqjw4yc3xmawm7";
-  };
-
-  cargoPatches = [ ./fix-build.patch ]; # Cargo.lock is not up-to-date
-
-  # Delete this on next update; see #79975 for details
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "073dnn80sl4adh7vi6q9sx2vkmy27gxy7ysxz17iz12p7pfcagm2";
-
-  meta = with stdenv.lib; {
-    description = "gc-sections for wasm";
-    homepage = "https://github.com/alexcrichton/wasm-gc";
-    maintainers = with maintainers; [ ekleog ];
-    platforms = platforms.all;
-    license = with licenses; [ mit asl20 ];
-  };
-}

pkgs/development/interpreters/wasm-gc/fix-build.patch

@@ -1,34 +0,0 @@
-diff --git a/Cargo.lock b/Cargo.lock
-index 923ed91..71f17c8 100644
---- a/Cargo.lock
-+++ b/Cargo.lock
-@@ -212,16 +212,16 @@ dependencies = [
- 
- [[package]]
- name = "wasm-gc"
--version = "0.1.1"
-+version = "0.1.6"
- dependencies = [
-  "env_logger 0.5.10 (registry+https://github.com/rust-lang/crates.io-index)",
-  "getopts 0.2.17 (registry+https://github.com/rust-lang/crates.io-index)",
-- "wasm-gc-api 0.1.5",
-+ "wasm-gc-api 0.1.6",
- ]
- 
- [[package]]
- name = "wasm-gc-api"
--version = "0.1.5"
-+version = "0.1.6"
- dependencies = [
-  "log 0.4.1 (registry+https://github.com/rust-lang/crates.io-index)",
-  "parity-wasm 0.31.0 (registry+https://github.com/rust-lang/crates.io-index)",
-@@ -234,7 +234,7 @@ version = "0.1.0"
- dependencies = [
-  "cfg-if 0.1.3 (registry+https://github.com/rust-lang/crates.io-index)",
-  "wasm-bindgen 0.2.11 (registry+https://github.com/rust-lang/crates.io-index)",
-- "wasm-gc-api 0.1.5",
-+ "wasm-gc-api 0.1.6",
- ]
- 
- [[package]]
-

pkgs/development/libraries/libfishsound/default.nix

@@ -0,0 +1,25 @@
+{ stdenv, fetchurl, libvorbis, speex, flac, pkgconfig }:
+
+stdenv.mkDerivation rec {
+  name = "libfishsound-1.0.0";
+
+  src = fetchurl {
+    url = "http://downloads.xiph.org/releases/libfishsound/${name}.tar.gz";
+    sha256 = "1iz7mn6hw2wg8ljaw74f4g2zdj68ib88x4vjxxg3gjgc5z75f2rf";
+  };
+
+  propagatedBuildInputs = [ libvorbis speex flac ];
+
+  nativeBuildInputs = [ pkgconfig ];
+
+  meta = with stdenv.lib; {
+    homepage = https://xiph.org/fishsound/;
+    description = ''libfishsound by itself is designed to handle raw codec streams from a lower level layer such as UDP datagrams. When these codecs are used in files, they are commonly encapsulated in Ogg to produce Ogg FLAC, Speex and Ogg Vorbis files.
+
+libfishsound is a wrapper around the existing codec libraries and provides a consistent, higher-level programming interface. It has been designed for use in a wide variety of applications; it has no direct dependencies on Ogg encapsulation, though it is most commonly used in conjunction with liboggz to decode or encode FLAC, Speex or Vorbis audio tracks in Ogg files, including Ogg Theora and Annodex.
+
+FishSound has been developed and tested on GNU/Linux, Darwin/MacOSX and Win32. It probably also works on other Unix-like systems via GNU autoconf. For Win32: nmake Makefiles, Visual Studio .NET 2003 solution files and Visual C++ 6.0 workspace files are all provided in the source distribution.'';
+    platforms = platforms.unix;
+    license = licenses.bsd3;
+  };
+}

pkgs/development/libraries/libgnurl/default.nix

@@ -39,7 +39,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "A fork of libcurl used by GNUnet";
     homepage    = "https://gnunet.org/en/gnurl.html";
-    maintainers = with maintainers; [ falsifian vrthra ];
+    maintainers = with maintainers; [ vrthra ];
     platforms = platforms.linux;
     license = licenses.curl;
   };

pkgs/development/libraries/libsixel/default.nix

@@ -1,13 +1,13 @@
 {stdenv, fetchFromGitHub}:
 stdenv.mkDerivation rec {
-  version = "1.8.4";
+  version = "1.8.6";
   pname = "libsixel";
 
   src = fetchFromGitHub {
     repo = "libsixel";
     rev = "v${version}";
     owner = "saitoha";
-    sha256 = "1zckahfl0j7k68jf87iwdc4yx7fkfhxwa7lrf22dnz36d2iq785v";
+    sha256 = "1saxdj6sldv01g6w6yk8vr7px4bl31xca3a82j6v1j3fw5rbfphy";
   };
 
   configureFlags = [

pkgs/development/libraries/readline/readline-8.0-patches.nix

@@ -2,4 +2,7 @@
 
 patch: [
 (patch "001" "0sfh7wn0pr743xspnb1zndxndlv9rc0hcg14cbw5cmyg6f4ykrfq")
+(patch "002" "1xy8mv8xm8hsfixwp3ci9kfx3dii3y92cq27wwd0jq75y6zzxc1n")
+(patch "003" "1vza7sxjcsr2z295ij12nzgncdil1vb6as3mqy4m7svi1chv5pcl")
+(patch "004" "0k1rfx9w32lglxg564yvp0mw6jg6883p8ac2f2lxxqpf80m3vami")
 ]

pkgs/development/libraries/science/math/ecos/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "ecos";
-  version = "2.0.6";
+  version = "2.0.7";
 
   src = fetchFromGitHub {
     owner = "embotech";
     repo = "ecos";
-    rev = "v${version}";
+    rev = version;
-    sha256 = "11v958j66wq30gxpjpkgl7n3rvla845lygz8fl39pgf1vk9sdyc7";
+    sha256 = "1hsndim5kjvcwk5svqa4igawzahj982180xj1d7yd0dbjlgxc7w7";
   };
 
   buildPhase = ''
@@ -29,9 +29,10 @@ stdenv.mkDerivation rec {
 
   meta = with stdenv.lib; {
     description = "A lightweight conic solver for second-order cone programming";
-    homepage = https://www.embotech.com/ECOS;
+    homepage = "https://www.embotech.com/ECOS";
+    downloadPage = "https://github.com/embotech/ecos/releases";
     license = licenses.gpl3;
     platforms = platforms.all;
-    maintainers = [ maintainers.bhipple ];
+    maintainers = with maintainers; [ bhipple ];
   };
 }

pkgs/development/misc/loc/default.nix

@@ -13,10 +13,7 @@ buildRustPackage rec {
     sha256 = "0086asrx48qlmc484pjz5r5znli85q6qgpfbd81gjlzylj7f57gg";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1fgv1kxiif48q9mm60ygn88r5nkxfyiacmvbgwp0jxiacv8r7779";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "06iqzpg5jz1xd2amajvlf7yaz9kr3q2ipbhx71whvv9mwplmxmbi";
 
   meta = with stdenv.lib; {
     homepage = https://github.com/cgag/loc;

pkgs/development/python-modules/docloud/default.nix

@@ -0,0 +1,30 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, requests
+}:
+
+buildPythonPackage rec {
+  pname = "docloud";
+  version = "1.0.375";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "996d55407498fd01e6c6c480f367048f92255e9ca9db0e9ea19aaef91328a441";
+  };
+
+  propagatedBuildInputs = [
+    requests
+  ];
+
+  # Pypi's tarball doesn't contain tests. Source not available.
+  doCheck = false;
+  pythonImportsCheck = [ "docloud" ];
+
+  meta = with lib; {
+    description = "The IBM Decision Optimization on Cloud Python client";
+    homepage = "https://onboarding-oaas.docloud.ibmcloud.com/software/analytics/docloud/";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ drewrisinger ];
+  };
+}

pkgs/development/python-modules/helpdev/default.nix

@@ -0,0 +1,30 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, importlib-metadata
+, psutil
+}:
+
+buildPythonPackage rec {
+  pname = "helpdev";
+  version = "0.6.10";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "9e61d24458b7506809670222ca656b139e67d46c530cd227a899780152d7b44e";
+  };
+
+  propagatedBuildInputs = [
+    importlib-metadata
+    psutil
+  ];
+
+  # No tests included in archive
+  doCheck = false;
+
+  meta = {
+    description = "Extracts information about the Python environment easily";
+    license = lib.licenses.mit;
+  };
+
+}

pkgs/development/python-modules/python-jsonrpc-server/default.nix

@@ -1,17 +1,17 @@
 { stdenv, buildPythonPackage, fetchFromGitHub, pythonOlder
 , pytest, mock, pytestcov, coverage
-, future, futures
+, future, futures, ujson
 }:
 
 buildPythonPackage rec {
   pname = "python-jsonrpc-server";
-  version = "0.2.0";
+  version = "0.3.4";
 
   src = fetchFromGitHub {
     owner = "palantir";
     repo = "python-jsonrpc-server";
     rev = version;
-    sha256 = "054b0xm5z3f82jwp7zj21pkh7gwj9jd933jhymdx49n1n1iynfn0";
+    sha256 = "sha256:027sx5pv4i9a192kr00bjjcxxprh2xyr8q5372q8ghff3xryk9dd";
   };
 
   postPatch = ''
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     pytest
   '';
 
-  propagatedBuildInputs = [ future ]
+  propagatedBuildInputs = [ future ujson ]
     ++ stdenv.lib.optional (pythonOlder "3.2") futures;
 
   meta = with stdenv.lib; {

pkgs/development/python-modules/python-language-server/default.nix

@@ -1,6 +1,6 @@
 { stdenv, buildPythonPackage, fetchFromGitHub, pythonOlder, isPy27
 , backports_functools_lru_cache, configparser, futures, future, jedi, pluggy, python-jsonrpc-server, flake8
-, pytest, mock, pytestcov, coverage, setuptools
+, pytestCheckHook, mock, pytestcov, coverage, setuptools, ujson
 , # Allow building a limited set of providers, e.g. ["pycodestyle"].
   providers ? ["*"]
   # The following packages are optional and
@@ -21,30 +21,45 @@ in
 
 buildPythonPackage rec {
   pname = "python-language-server";
-  version = "0.29.1";
+  version = "0.31.8";
 
   src = fetchFromGitHub {
     owner = "palantir";
     repo = "python-language-server";
     rev = version;
-    sha256 = "0hsp0h8vma8z6f0mg311hp59h6hayl7zzxmy295x5fl2l9iiakfv";
+    sha256 = "sha256:1h0w7x7d9g3z7vmxn5w7qxdkjya3sl0xfnklfaaaj8dkb5mjldpi";
   };
 
   # The tests require all the providers, disable otherwise.
   doCheck = providers == ["*"];
 
   checkInputs = [
-    pytest mock pytestcov coverage
+    pytestCheckHook mock pytestcov coverage
     # rope is technically a dependency, but we don't add it by default since we
     # already have jedi, which is the preferred option
     rope
   ];
 
-  checkPhase = ''
+  dontUseSetuptoolsCheck = true;
-    HOME=$TEMPDIR pytest
+
+  preCheck = ''
+    export HOME=$TEMPDIR
   '';
 
-  propagatedBuildInputs = [ setuptools jedi pluggy future python-jsonrpc-server flake8 ]
+  # Tests failed since update to 0.31.8
+  disabledTests = [
+    "test_pyqt_completion"
+    "test_numpy_completions"
+    "test_pandas_completions"
+    "test_matplotlib_completions"
+    "test_snippet_parsing"
+
+  ];
+  # checkPhase = ''
+  #   HOME=$TEMPDIR pytest -k "not test_pyqt_completion and not 
+  # '';
+
+  propagatedBuildInputs = [ setuptools jedi pluggy future python-jsonrpc-server flake8 ujson ]
     ++ stdenv.lib.optional (withProvider "autopep8") autopep8
     ++ stdenv.lib.optional (withProvider "mccabe") mccabe
     ++ stdenv.lib.optional (withProvider "pycodestyle") pycodestyle

pkgs/development/python-modules/qdarkstyle/default.nix

@@ -1,18 +1,25 @@
-{ lib, fetchPypi, buildPythonPackage }:
+{ lib
+, fetchPypi
+, buildPythonPackage
+, helpdev
+, qtpy
+}:
 
 buildPythonPackage rec {
   pname = "qdarkstyle";
-  version = "2.6.8";
+  version = "2.8";
 
   src = fetchPypi {
     inherit version;
     pname = "QDarkStyle";
-    sha256 = "18l2ynq2x8jd380nr47xy947c3qdmhv8nnxnan03y5d51azm8yh3";
+    sha256 = "6a967c4b664446f8bed9df12d1032cf68cb54f186bfc9cbfdbbc756bf9a5d475";
   };
 
   # No tests available
   doCheck = false;
 
+  propagatedBuildInputs = [ helpdev qtpy ];
+
   meta = with lib; {
     description = "A dark stylesheet for Python and Qt applications";
     homepage = https://github.com/ColinDuquesnoy/QDarkStyleSheet;

pkgs/development/python-modules/seqdiag/default.nix

@@ -1,14 +1,15 @@
-{ stdenv, fetchurl, buildPythonPackage, pep8, nose, unittest2, docutils
+{ stdenv, fetchurl, buildPythonPackage, isPy27, pep8, nose, unittest2, docutils
 , blockdiag
 }:
 
 buildPythonPackage rec {
   pname = "seqdiag";
-  version = "0.9.6";
+  version = "2.0.0";
+  disabled = isPy27;
 
   src = fetchurl {
     url = "mirror://pypi/s/seqdiag/${pname}-${version}.tar.gz";
-    sha256 = "78104e7644c1a4d3a5cacb68de6a7f720793f08dd78561ef0e9e80bed63702bf";
+    sha256 = "0k7j4f9j3d0325piwvbv90nfh0wzfk2n6s73s6h6nsxmqshcgswk";
   };
 
   buildInputs = [ pep8 nose unittest2 docutils ];

pkgs/development/python-modules/spyder-kernels/2.nix

@@ -0,0 +1,30 @@
+{ stdenv, buildPythonPackage, fetchPypi, cloudpickle, ipykernel, wurlitzer,
+  jupyter_client, pyzmq }:
+
+buildPythonPackage rec {
+  pname = "spyder-kernels";
+  version = "0.5.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "01354b7fa180a87212cc005553b31a7300159b108d36828e301d3782291323f7";
+  };
+
+  propagatedBuildInputs = [
+    cloudpickle
+    ipykernel
+    wurlitzer
+    jupyter_client
+    pyzmq
+  ];
+
+  # No tests
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    description = "Jupyter kernels for Spyder's console";
+    homepage = "https://github.com/spyder-ide/spyder-kernels";
+    license = licenses.mit;
+    maintainers = with maintainers; [ gebner ];
+  };
+}

pkgs/development/python-modules/spyder/2.nix

@@ -0,0 +1,70 @@
+{ stdenv, buildPythonPackage, fetchPypi, makeDesktopItem, jedi, pycodestyle,
+  psutil, pyflakes, rope, numpy, scipy, matplotlib, pylint, keyring, numpydoc,
+  qtconsole, qtawesome, nbconvert, mccabe, pyopengl, cloudpickle, pygments,
+  spyder-kernels, qtpy, pyzmq, chardet
+, pyqtwebengine
+}:
+
+buildPythonPackage rec {
+  pname = "spyder";
+  version = "3.3.6";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1z7qw1h3rhca12ycv8xrzw6z2gf81v0j6lfq9kpwh472w4vk75v1";
+  };
+
+  nativeBuildInputs = [ pyqtwebengine.wrapQtAppsHook ];
+
+  propagatedBuildInputs = [
+    jedi pycodestyle psutil pyflakes rope numpy scipy matplotlib pylint keyring
+    numpydoc qtconsole qtawesome nbconvert mccabe pyopengl cloudpickle spyder-kernels
+    pygments qtpy pyzmq chardet pyqtwebengine
+  ];
+
+  # There is no test for spyder
+  doCheck = false;
+
+  desktopItem = makeDesktopItem {
+    name = "Spyder";
+    exec = "spyder";
+    icon = "spyder";
+    comment = "Scientific Python Development Environment";
+    desktopName = "Spyder";
+    genericName = "Python IDE";
+    categories = "Application;Development;Editor;IDE;";
+  };
+
+  postPatch = ''
+    # remove dependency on pyqtwebengine
+    # this is still part of the pyqt 5.11 version we have in nixpkgs
+    sed -i /pyqtwebengine/d setup.py
+    substituteInPlace setup.py --replace "pyqt5<5.13" "pyqt5"
+  '';
+
+  # Create desktop item
+  postInstall = ''
+    mkdir -p $out/share/icons
+    cp spyder/images/spyder.svg $out/share/icons
+    cp -r $desktopItem/share/applications/ $out/share
+  '';
+
+  dontWrapQtApps = true;
+
+  preFixup = ''
+    makeWrapperArgs+=("''${qtWrapperArgs[@]}")
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Scientific python development environment";
+    longDescription = ''
+      Spyder (previously known as Pydee) is a powerful interactive development
+      environment for the Python language with advanced editing, interactive
+      testing, debugging and introspection features.
+    '';
+    homepage = "https://github.com/spyder-ide/spyder/";
+    license = licenses.mit;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ gebner ];
+  };
+}

pkgs/development/python-modules/spyder/default.nix

@@ -1,25 +1,25 @@
-{ stdenv, buildPythonPackage, fetchPypi, makeDesktopItem, jedi, pycodestyle,
+{ stdenv, buildPythonPackage, fetchPypi, makeDesktopItem, intervaltree, jedi, pycodestyle,
   psutil, pyflakes, rope, numpy, scipy, matplotlib, pylint, keyring, numpydoc,
   qtconsole, qtawesome, nbconvert, mccabe, pyopengl, cloudpickle, pygments,
-  spyder-kernels, qtpy, pyzmq, chardet
+  spyder-kernels, qtpy, pyzmq, chardet, qdarkstyle, watchdog, python-language-server
 , pyqtwebengine
 }:
 
 buildPythonPackage rec {
   pname = "spyder";
-  version = "4.0.0";
+  version = "4.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f2bfece9743188e3d1da68f02271a7c6eb7f0a3b692c3df4952458ab96b037a8";
+    sha256 = "4b279c16487d224368dd2213e1517185fa59fc528f539601fffb34ea97accb7b";
   };
 
   nativeBuildInputs = [ pyqtwebengine.wrapQtAppsHook ];
 
   propagatedBuildInputs = [
-    jedi pycodestyle psutil pyflakes rope numpy scipy matplotlib pylint keyring
+    intervaltree jedi pycodestyle psutil pyflakes rope numpy scipy matplotlib pylint keyring
     numpydoc qtconsole qtawesome nbconvert mccabe pyopengl cloudpickle spyder-kernels
-    pygments qtpy pyzmq chardet pyqtwebengine
+    pygments qtpy pyzmq chardet pyqtwebengine qdarkstyle watchdog python-language-server
   ];
 
   # There is no test for spyder
@@ -66,5 +66,6 @@ buildPythonPackage rec {
     license = licenses.mit;
     platforms = platforms.linux;
     maintainers = with maintainers; [ gebner ];
+    broken = true;
   };
 }

pkgs/development/python-modules/vertica-python/default.nix

@@ -0,0 +1,27 @@
+{ lib, buildPythonPackage, fetchPypi, future, dateutil, six, pytest, mock, parameterized }:
+
+buildPythonPackage rec {
+  pname = "vertica-python";
+  version = "0.10.2";
+  
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "c35d0e7ac8da2af47a65efc72d5d8351caa93e4829e549f229aa7e375593f896";
+  };
+  
+  propagatedBuildInputs = [ future dateutil six ];
+  
+  checkInputs = [ pytest mock parameterized ];
+  
+  # Integration tests require an accessible Vertica db
+  checkPhase = ''
+    pytest --ignore vertica_python/tests/integration_tests
+  '';
+  
+  meta = with lib; {
+    description = "Native Python client for Vertica database";
+    homepage = "https://github.com/vertica/vertica-python";
+    license = licenses.asl20;
+    maintainers = [ maintainers.arnoldfarkas ];
+  };
+}

pkgs/development/tools/analysis/panopticon/default.nix

@@ -24,10 +24,7 @@ rustPlatform.buildRustPackage rec {
      git
   ];
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1hdsn011y9invfy7can8c02zwa7birj9y1rxhrj7wyv4gh3659i0";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1fsxd7yzb38h1d52yyz7kj1v0riycjydb1b1bn1zkhgwm5sm2kbs";
   doCheck = false;
 
   postInstall = ''

pkgs/development/tools/async/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "19ypflbayi5l0mb8yw7w0a4bq9a3w8nl9jsxapp9m3xggzmsvrxx";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1zgds5rjjikvaj0rxc7slyvkjn067s0v8vdnxn3vsv819q5yd707";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1qf52xsd15rj8y9w65zyab7akvzry76k1d4gxvxlz7ph3sl7jl3y";
 
   meta = with stdenv.lib; {
     description = "A tool to parallelize shell commands";

pkgs/development/tools/chit/default.nix

@@ -15,10 +15,7 @@ buildRustPackage rec {
     sha256 = "0iixczy3cad44j2d7zzj8f3lnmp4jwnb0snmwfgiq3vj9wrn28pz";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1w25k3bqmmcrhpkw510vbwph0rfmrzi2wby0z2rz1q4k1f9k486m";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0k6z69a09ps55w2rdgnf92yscw6rlbcpb4q9yf3rsav15pgpqvw8";
 
   nativeBuildInputs = stdenv.lib.optionals stdenv.isLinux [ pkgconfig ];
   buildInputs = []

pkgs/development/tools/database/liquibase/default.nix

@@ -10,11 +10,11 @@ in
 
 stdenv.mkDerivation rec {
   pname = "liquibase";
-  version = "3.8.5";
+  version = "3.8.6";
 
   src = fetchurl {
     url = "https://github.com/liquibase/liquibase/releases/download/v${version}/${pname}-${version}.tar.gz";
-    sha256 = "0wvz188i1214b904xrhvba90hyfrlc4za3aibbdqfm86wm3qzh6s";
+    sha256 = "19x6v8kji3mjpf3r0khmlvgkljm269r16w8p4yvknsw4rf0rl9x4";
   };
 
   buildInputs = [ jre makeWrapper ];

pkgs/development/tools/just/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0a4bml9nxvyh110a60l4lc11yr2ds5r8d3iplslccrkq1ka96av9";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0wp61zjws9r1aapkapvq2vmad5kylkpw03wa82qhhq30knkpvr7b";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0dbgjc21q0zaadsjvq3s6y6f4dmsybxb6g2sg8w2d3phkm9j921z";
 
   checkInputs = [ coreutils bash dash ];
 

pkgs/development/tools/misc/tinyprog/default.nix

@@ -24,6 +24,7 @@ with python3Packages; buildPythonApplication rec {
     tqdm
     six
     packaging
+    setuptools
     pyusb
   ];
 

pkgs/development/tools/misc/wishbone-tool/default.nix

@@ -1,26 +1,31 @@
 { lib, fetchFromGitHub, rustPlatform, libusb }:
+
 let
-  version = "0.2.8";
+  version = "0.6.9";
   src = fetchFromGitHub {
-    owner = "xobs";
+    owner = "litex-hub";
     repo = "wishbone-utils";
     rev = "v${version}";
-    sha256 = "0v6s5yl0y6bd2snf12x6c77rwvqkg6ybi1sm4wr7qdgbwq563nxp";
+    sha256 = "0gq359ybxnqvcp93cn154bs9kwlai62gnm71yvl2nhzjdlcr3fhp";
   };
 in
 rustPlatform.buildRustPackage {
   pname = "wishbone-tool";
   inherit version;
-  src = "${src}/wishbone-tool";
-  # Delete this on next update; see #79975 for details
-  legacyCargoFetcher = true;
 
-  cargoSha256 = "0pj8kf6s1c666p4kc6q1hlvaqm0lm9aqnsx5r034g1y8sxnnyri2";
+  src = "${src}/wishbone-tool";
+
+  # N.B. The cargo vendor consistency checker searches in "source" for lockfile
+  cargoDepsHook = ''
+    ln -s wishbone-tool source
+  '';
+  cargoSha256 = "0d5kcwy0cgxqfxf2xysw65ng84q4knhp4fgvh6dwqhf0nsca9gvs";
+
   buildInputs = [ libusb ];
 
   meta = with lib; {
     description = "Manipulate a Wishbone device over some sort of bridge";
-    homepage = "https://github.com/xobs/wishbone-utils#wishbone-tool";
+    homepage = "https://github.com/litex-hub/wishbone-utils";
     license = licenses.bsd2;
     maintainers = with maintainers; [ edef ];
     platforms = platforms.linux;

pkgs/development/tools/rq/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0km9d751jr6c5qy4af6ks7nv3xfn13iqi03wq59a1c73rnf0zinp";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0c5vwy3c5ji602dj64z6jqvcpi2xff03zvjbnwihb3ydqwnb3v67";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0z971fpyj4v5hjp6q4yxgxv069h9idkpkcixb14gxi7kpiswprvz";
 
   buildInputs = [ llvmPackages.clang-unwrapped v8 ];
 

pkgs/development/tools/rust/bindgen/default.nix

@@ -14,10 +14,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0zxqryqks9in9q7az0lrw8fq9wnc5p4yf6b1fxnzy2j6qhlw2c5c";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1fdgm83l9d469garfbgny6jk1fvwnwh32sybz9g7s2qzrvzzrx1d";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1wy5xdkf9ql2l9qavi0fh7hwjvly108f4l2m1k947412fyjwr7x7";
 
   libclang = llvmPackages.libclang.lib; #for substituteAll
 

pkgs/development/tools/rust/cargo-asm/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0zn5p95hsmhvk2slc9hakrpvim6l4zbpgkks2x64ndwyfmzyykws";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1xsfwzn2b7hmb7hwgfa4ss7qfas8957gkw7zys0an9hdj5qr3ywb";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1k9mc29y4487ssf5whvr8xig7j4jh0rpcrhclp6siw8xamygijdm";
 
   buildInputs = stdenv.lib.optional stdenv.isDarwin Security;
 

pkgs/development/tools/scaff/default.nix

@@ -12,10 +12,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1s5v50205l2h33pccyafrjv3a6lpb62inhm8z81hkvx53bqifvd7";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0k6msvly3yhzl1hhs4zv31qzbllwmw16i55dbznlgp1c8icy2pwr";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "17rnzwlgrpr6isbajaccxa83msvvskxyqrc4cirgjmc7aqa0ilbh";
 
   nativeBuildInputs = [ pkgconfig ];
   buildInputs = [ openssl ];

pkgs/development/tools/skaffold/default.nix

@@ -2,9 +2,9 @@
 
 buildGoPackage rec {
   pname = "skaffold";
-  version = "1.2.0";
+  version = "1.3.1";
-  # rev is the 1.2.0 commit, mainly for skaffold version command output
+  # rev is the 1.3.1 commit, mainly for skaffold version command output
-  rev = "80f82f42fe271aea1058f4a37776d52ab5a7c441";
+  rev = "6ba887a42438d1da578a005cf550e618fee6dfb8";
 
   goPackagePath = "github.com/GoogleContainerTools/skaffold";
   subPackages = ["cmd/skaffold"];
@@ -20,7 +20,7 @@ buildGoPackage rec {
     owner = "GoogleContainerTools";
     repo = "skaffold";
     rev = "v${version}";
-    sha256 = "17gdxifv3n2kcmz1pvs2ni2llq30zw6dwxgy5crs97h7hjdk29fw";
+    sha256 = "1ph7qyk5khdinxbhgqhhja8fz8b6q8yz5rj5xh0nwaff4bmlfd99";
   };
 
   meta = {

pkgs/development/tools/swiftformat/default.nix

@@ -7,13 +7,13 @@
 
 stdenv.mkDerivation rec {
   pname = "swiftformat";
-  version = "0.44.0";
+  version = "0.44.2";
 
   src = fetchFromGitHub {
     owner = "nicklockwood";
     repo = "SwiftFormat";
     rev = "${version}";
-    sha256 = "13s6syzpxklkv07s1dzdccnqz6p316rrhjpxg8y8dy19ynj5jzvg";
+    sha256 = "17g4w8kmkrhcp7lrfi525ck9jhcm96d0nn93yadacdjcdnchmih1";
   };
 
   preConfigure = "LD=$CC";

pkgs/games/freeorion/default.nix

@@ -4,14 +4,14 @@
 }:
 
 stdenv.mkDerivation rec {
-  version = "0.4.8";
+  version = "0.4.9";
   pname = "freeorion";
 
   src = fetchFromGitHub {
     owner  = "freeorion";
     repo   = "freeorion";
     rev = "v${version}";
-    sha256 = "1lj1q2ljjgbbiqxb53wdrrcz0zxxr3vv9jqrhbzvfsss7q808jfw";
+    sha256 = "18xigx4qla225ybf7mc1w8zfm81nhcm1i5181n5l2fbndvslb1wf";
   };
 
   buildInputs = [

pkgs/games/qtads/default.nix

@@ -1,16 +1,16 @@
-{ lib, stdenv, fetchFromGitHub, fetchpatch, pkgconfig, qmake
+{ lib, mkDerivation, fetchFromGitHub, fetchpatch, pkgconfig, qmake
 , SDL2, fluidsynth, libsndfile, libvorbis, mpg123, qtbase
 }:
 
-stdenv.mkDerivation rec {
+mkDerivation rec {
   pname = "qtads";
-  version = "2.1.99.2019-04-12";
+  version = "3.0.0";
 
   src = fetchFromGitHub {
     owner = "realnc";
     repo = pname;
-    rev = "43289a830a18c66a293c2b1ee75a08e92e8dd5dc";
+    rev = "v${version}";
-    sha256 = "0zscf6nmjjc4i7c38iy8znv2s453xc49gn7knyi3g1l6iinjwbx7";
+    sha256 = "02kk2hs20h9ffhylwms9f8zikmmlrz1nvbrm97gis9iljkyx035c";
   };
 
   nativeBuildInputs = [ pkgconfig qmake ];

pkgs/games/quake3/quake3e/default.nix

@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "Quake3e";
-  version = "2019-11-29";
+  version = "2020-01-23";
 
   src = fetchFromGitHub {
     owner = "ec-";
     repo = pname;
     rev = version;
-    sha256 = "1gpfl72rzwiawhcj3ir38sqdb95y7w7lm7wgj44lbn99z7bvkcn3";
+    sha256 = "0crqn32nkqhlagamkp5nr0vl474ad4wx5ms7yr85s6zybpsk5jnz";
   };
 
   buildInputs = [ curl libGL libX11 libXxf86dga alsaLib libXrandr libXxf86vm libXext ];
@@ -33,5 +33,6 @@ stdenv.mkDerivation rec {
     license = licenses.gpl2;
     platforms = platforms.linux;
     maintainers = with maintainers; [ pmiddend ];
+    badPlatforms = [ platforms.aarch64 ];
   };  
 }

pkgs/misc/uq/default.nix

@@ -14,10 +14,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1qqqmdk0v1d3ckasmmw5lbrkvhkv0nws4bzi9cfi1ndhrbvbkbxb";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1fv13rbghfw7114h7sda04gpqrjrsgnnki0p9kdd6r6sk5cbhn9x";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1s22v2wz5h3l5l447zl54bhdk6avkk2ycrbbpxcx1442lllbss4w";
 
   meta = with lib; {
     description = "A simple, user-friendly alternative to sort | uniq";

pkgs/servers/clickhouse/default.nix

@@ -7,13 +7,13 @@
 
 stdenv.mkDerivation rec {
   pname = "clickhouse";
-  version = "19.13.6.51";
+  version = "19.17.8.54";
 
   src = fetchFromGitHub {
     owner  = "yandex";
     repo   = "ClickHouse";
     rev    = "v${version}-stable";
-    sha256 = "0mcwfam1nrs2g54syw7vvpfkjn3l4gfzvla7xbg92lr03fn6kbn2";
+    sha256 = "0ck6kcifj7y4i2j1jj1a9vf5nfpp9mxk5x8y8557zp9yayjm9qyr";
   };
 
   nativeBuildInputs = [ cmake libtool ninja ];

pkgs/servers/mail/rspamd/default.nix

@@ -10,13 +10,13 @@ assert withHyperscan -> stdenv.isx86_64;
 
 stdenv.mkDerivation rec {
   pname = "rspamd";
-  version = "2.2";
+  version = "2.3";
 
   src = fetchFromGitHub {
     owner = "rspamd";
     repo = "rspamd";
     rev = version;
-    sha256 = "0rqiz4xm20w80q8p4grcgqcrg14yiddsay0aw00f0v82h4apw7k8";
+    sha256 = "1v4kbvj9r0hs8jaisq3fr0rg0qndpbhc5h8cbpfpprmkbw4nj6pf";
   };
 
   nativeBuildInputs = [ cmake pkgconfig perl ];

pkgs/servers/mautrix-whatsapp/default.nix

@@ -2,16 +2,16 @@
 
 buildGoModule {
   pname = "mautrix-whatsapp-unstable";
-  version = "2020-01-12";
+  version = "2020-02-09";
 
   src = fetchFromGitHub {
     owner = "tulir";
     repo = "mautrix-whatsapp";
-    rev = "39e46833b471b0cf262d4ff57fcd61530b5d2b9e";
+    rev = "260555b69ccd20f247405e4d8cab3d49fabda070";
-    sha256 = "1r1f52advibb97vrhi2gw0d0scnsvfbmfqizsbpjmgm7ci9jjhcl";
+    sha256 = "1ykhwrp8bvhzzw4lg4m1w430ybgzd0zqgrs4jrvfd1m0als2iff7";
   };
 
-  modSha256 = "18bcv7x49bqnzwhafh8fvyv9z2d4j6w0iyqql0alq57hy7h7lxik";
+  modSha256 = "0ypj79rjwj5bls6aq2cz0d034dnv1sddl43iz51b4fl2bfv0drm9";
 
   meta = with stdenv.lib; {
     homepage = https://github.com/tulir/mautrix-whatsapp;

pkgs/servers/plex/raw.nix

@@ -8,13 +8,13 @@
 # server, and the FHS userenv and corresponding NixOS module should
 # automatically pick up the changes.
 stdenv.mkDerivation rec {
-  version = "1.18.4.2171-ac2afe5f8";
+  version = "1.18.6.2368-97add474d";
   pname = "plexmediaserver";
 
   # Fetch the source
   src = fetchurl {
     url = "https://downloads.plex.tv/plex-media-server-new/${version}/redhat/plexmediaserver-${version}.x86_64.rpm";
-    sha256 = "10x4cf1c826vj9gqr7r6k70rrjifmi36sd7imfi7pdw5swizjzqv";
+    sha256 = "0d2nnvw9qpmsra6g044bz192v67igcp1mfayy4sk0j2yqgiqvcgl";
   };
 
   outputs = [ "out" "basedb" ];

pkgs/shells/bash/bash-5.0-patches.nix

@@ -12,4 +12,9 @@ patch: [
 (patch "009" "00yrjjqd95s81b21qq3ba1y7h879q8jaajlkjggc6grhcwbs4g7d")
 (patch "010" "04ca5bjv456v538mkspzvn4xb2zdphh31r4fpvfm9p5my0jw7yyn")
 (patch "011" "1sklyixvsv8993kxzs0jigacpdchjrq7jv5xpdx7kbqyp4rf6k9c")
+(patch "012" "0cz21qg2gbr40lfgza7g02bqi2qknwqgxnq459pjj640d0cywhr9")
+(patch "013" "16h9nwz3yzwj7fnxvlidjymdc4yr30h818433gh9j1x3in6igmzm")
+(patch "014" "12gm5bvv2pd3m72z2ilj26pa08c61az253dsgfl24vpf2ijywvjx")
+(patch "015" "0pm0px758w4i23s55wajcv6lqfiym7zgxvq0pxf6vclkv8nxy5x5")
+(patch "016" "0vdha332km2iwx8g2ld15jy7d24cbplzgr1531dpzylr9ajxglgz")
 ]

pkgs/shells/fish/fish-foreign-env/suppress-harmless-warnings.patch

@@ -14,7 +14,7 @@ index 34a25e3..3d94135 100644
  
 -        set -g -x $key $value
 +        if contains $key $ignore
-+          set -g -x $key $value ^/dev/null
++          set -g -x $key $value 2>/dev/null
 +        else
 +          set -g -x $key $value
 +        end

pkgs/tools/X11/xidlehook/default.nix

@@ -16,10 +16,7 @@ rustPlatform.buildRustPackage rec {
   };
 
   cargoBuildFlags = lib.optionals (!stdenv.isLinux) ["--no-default-features" "--features" "pulse"];
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0wakw3pqgwfwarjfb3h0a2javrhnf509v3j547a7p9k5kbjb5np0";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0jdkcxvlw7s8pz1ka3d2w97356a2axvlwfgyh2dz7nmfzpjx64x0";
 
   buildInputs = [ xlibsWrapper xorg.libXScrnSaver libpulseaudio ] ++ lib.optional stdenv.isDarwin Security;
   nativeBuildInputs = [ pkgconfig patchelf python3 ];

pkgs/tools/bootloaders/refind/default.nix

@@ -14,12 +14,12 @@ in
 
 stdenv.mkDerivation rec {
   pname = "refind";
-  version = "0.11.4";
+  version = "0.11.5";
   srcName = "refind-src-${version}";
 
   src = fetchurl {
     url = "mirror://sourceforge/project/refind/${version}/${srcName}.tar.gz";
-    sha256 = "1bjd0dl77bc5k6g3kc7s8m57vpbg2zscph9qh84xll9rc10g3fir";
+    sha256 = "0pphl37y1zfrcai821aab9k097yp669hn1j07cas1nppinafg78v";
   };
 
   patches = [
@@ -121,7 +121,7 @@ stdenv.mkDerivation rec {
       Linux kernels that provide EFI stub support.
     '';
     homepage = http://refind.sourceforge.net/;
-    maintainers = [ maintainers.AndersonTorres ];
+    maintainers = with maintainers; [ AndersonTorres samueldr ];
     platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" ];
     license = licenses.gpl3Plus;
   };

pkgs/tools/misc/apt-offline/default.nix

@@ -19,7 +19,7 @@ python3Packages.buildPythonApplication rec {
   meta = with stdenv.lib; {
     description = "Offline APT package manager";
     license = licenses.gpl3;
-    maintainers = [ maintainers.falsifian ];
+    maintainers = [ ];
     platforms = platforms.linux;
   };
 }

pkgs/tools/misc/expect/default.nix

@@ -15,7 +15,7 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "format" ];
 
   postPatch = ''
-    sed -i "s,/bin/stty,$(type -p stty),g" configure
+    sed -i "s,/bin/stty,$(type -p stty),g" configure.in
   '';
 
   configureFlags = [

pkgs/tools/misc/youtube-dl/default.nix

@@ -18,11 +18,11 @@ buildPythonPackage rec {
   # The websites youtube-dl deals with are a very moving target. That means that
   # downloads break constantly. Because of that, updates should always be backported
   # to the latest stable release.
-  version = "2020.01.24";
+  version = "2020.02.16";
 
   src = fetchurl {
     url = "https://yt-dl.org/downloads/${version}/${pname}-${version}.tar.gz";
-    sha256 = "1zrnbjnwv315f9a83lk5c0gl4ianvp6q2kinxvqlv604sabcq78b";
+    sha256 = "1ip0p7gifwmkls8ppfvz89j1lh82dg60zmvabj8njnhj170ikkdb";
   };
 
   nativeBuildInputs = [ makeWrapper ];

pkgs/tools/nix/nixdoc/default.nix

@@ -13,10 +13,7 @@ rustPlatform.buildRustPackage rec {
 
   buildInputs =  stdenv.lib.optional stdenv.isDarwin [ darwin.Security ];
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1vamwynkbnffs8ryr2zb1a41cymjvr8zzh1bifyh9hpkx2k11rs3";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1hy8w73fir4wnqx7zfvfqh7s24w95x9nkw55kmizvrwf0glw9m4n";
 
   meta = with stdenv.lib; {
     description = "Generate documentation for Nix functions";

pkgs/tools/nix/nixpkgs-fmt/default.nix

@@ -10,10 +10,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1iylldgyvrcarfigpbhicg6j6qyipfiqn7gybza7qajfzyprjqfa";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1jxvy4w9jxv898wgqyj9bpkhnc7pkj9dxg5x0b39xsnkzl2lr239";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "04my7dlp76dxs1ydy2sbbca8sp3n62wzdxyc4afcmrg8anb0ghaf";
 
   meta = with lib; {
     description = "Nix code formatter for nixpkgs";

pkgs/tools/package-management/cargo-about/default.nix

@@ -10,10 +10,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "0bsay1vqi5b3z7qjwbkwx3ikmpjzc0kswbajm50xmcwlg8jrn420";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1ynalwaqa70ihgras3frp5l3xniz58hwp108wkxn6zj8lwxbxfgx";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1mqicibpa9sxac8v2kk8vfvxcis2wkdkklia2pbspc0pz3h0c8if";
 
   meta = with lib; {
     description = "Cargo plugin to generate list of all licenses for a crate";

pkgs/tools/package-management/cargo-deb/default.nix

@@ -17,10 +17,7 @@ rustPlatform.buildRustPackage rec {
 
   buildInputs = lib.optionals stdenv.isDarwin [ Security ];
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "0ji6d5a23rzhkkk27iigqcf2zw3mx1p1ap0cryqcj43z5ixdygiw";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "0j64dcczxdr9zdch4a241d5adgipzz8sgbw00min9k3p8hbljd9n";
 
   meta = with lib; {
     description = "Generate Debian packages from information in Cargo.toml";

pkgs/tools/package-management/cargo-deps/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "16181p7ghvy9mqippg1xi2cw7yxvicis8v6n39wly5qw05i57aw2";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1zk6pf7agqs1mpld40rn05cwp4wy0vpjnn5ip6m83bxm8b3i87wk";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "1a9svdw1cgk6s7gqpsq3r25wxa2gr2xddqkc1cjk7hf6sk327cpv";
 
   meta = with lib; {
     description = "Cargo subcommand for building dependency graphs of Rust projects";

pkgs/tools/package-management/cargo-release/default.nix

@@ -11,10 +11,7 @@ rustPlatform.buildRustPackage rec {
     sha256 = "1w9w43i5br94vg5m4idabh67p4ffsx2lmc2g0ak2k961vl46wr0q";
   };
 
-  # Delete this on next update; see #79975 for details
+  cargoSha256 = "1x54c6wk5cbnqcy1qpsff8lwqxs0d4qf0v71r7wl0kjp8mrmmhl4";
-  legacyCargoFetcher = true;
-
-  cargoSha256 = "075fvvd4c8f3kz6i6ny835h6jpa3c1v3miwfwwrdyy49a85lzjyj";
 
   nativeBuildInputs = [ pkg-config ];
   buildInputs = [ openssl ] ++ stdenv.lib.optional stdenv.isDarwin Security;

pkgs/tools/package-management/cargo-update/cargo-lock.patch

@@ -0,0 +1,739 @@
+diff --git a/Cargo.lock b/Cargo.lock
+new file mode 100644
+index 000000000..76f256f46
+--- /dev/null
++++ b/Cargo.lock
+@@ -0,0 +1,733 @@
++# This file is automatically @generated by Cargo.
++# It is not intended for manual editing.
++[[package]]
++name = "aho-corasick"
++version = "0.7.6"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "memchr 2.2.1 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "ansi_term"
++version = "0.11.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "array_tool"
++version = "1.0.3"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "arrayref"
++version = "0.3.5"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "arrayvec"
++version = "0.5.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "atty"
++version = "0.2.14"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "hermit-abi 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)",
++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)",
++ "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "autocfg"
++version = "0.1.7"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "backtrace"
++version = "0.3.40"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "backtrace-sys 0.1.32 (registry+https://github.com/rust-lang/crates.io-index)",
++ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)",
++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)",
++ "rustc-demangle 0.1.16 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "backtrace-sys"
++version = "0.1.32"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "cc 1.0.50 (registry+https://github.com/rust-lang/crates.io-index)",
++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "base64"
++version = "0.10.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "byteorder 1.3.2 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "bitflags"
++version = "1.2.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "blake2b_simd"
++version = "0.5.10"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "arrayref 0.3.5 (registry+https://github.com/rust-lang/crates.io-index)",
++ "arrayvec 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)",
++ "constant_time_eq 0.1.4 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "byteorder"
++version = "1.3.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "cargo-update"
++version = "2.5.0"
++dependencies = [
++ "array_tool 1.0.3 (registry+https://github.com/rust-lang/crates.io-index)",
++ "clap 2.33.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "dirs 2.0.2 (registry+https://github.com/rust-lang/crates.io-index)",
++ "embed-resource 1.3.1 (registry+https://github.com/rust-lang/crates.io-index)",
++ "git2 0.10.2 (registry+https://github.com/rust-lang/crates.io-index)",
++ "json 0.11.15 (registry+https://github.com/rust-lang/crates.io-index)",
++ "lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "lazysort 0.2.1 (registry+https://github.com/rust-lang/crates.io-index)",
++ "regex 1.3.1 (registry+https://github.com/rust-lang/crates.io-index)",
++ "semver 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "serde 1.0.104 (registry+https://github.com/rust-lang/crates.io-index)",
++ "serde_derive 1.0.104 (registry+https://github.com/rust-lang/crates.io-index)",
++ "tabwriter 1.1.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "toml 0.5.5 (registry+https://github.com/rust-lang/crates.io-index)",
++ "unicode-normalization 0.1.9 (registry+https://github.com/rust-lang/crates.io-index)",
++ "url 2.1.1 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "cc"
++version = "1.0.50"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "jobserver 0.1.18 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "cfg-if"
++version = "0.1.10"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "clap"
++version = "2.33.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "ansi_term 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "atty 0.2.14 (registry+https://github.com/rust-lang/crates.io-index)",
++ "bitflags 1.2.1 (registry+https://github.com/rust-lang/crates.io-index)",
++ "strsim 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "textwrap 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)",
++ "unicode-width 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)",
++ "vec_map 0.8.1 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "cloudabi"
++version = "0.0.3"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "bitflags 1.2.1 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "constant_time_eq"
++version = "0.1.4"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++
++[[package]]
++name = "crossbeam-utils"
++version = "0.6.6"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)",
++ "lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
++name = "dirs"
++version = "2.0.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++dependencies = [
++ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)",
++ "dirs-sys 0.3.4 (registry+https://github.com/rust-lang/crates.io-index)",
++]
++
++[[package]]
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