From 2ada4729645359ad7571c1927231bead70dadb32 Mon Sep 17 00:00:00 2001
From: sbond75 <43617712+sbond75@users.noreply.github.com>
Date: Tue, 22 Dec 2020 22:51:01 -0500
Subject: [PATCH 01/45] maintainers: add sbond75

---
 maintainers/maintainer-list.nix | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/maintainers/maintainer-list.nix b/maintainers/maintainer-list.nix
index e3a0e4beee2..a8b7ae6346b 100644
--- a/maintainers/maintainer-list.nix
+++ b/maintainers/maintainer-list.nix
@@ -7921,6 +7921,12 @@
     githubId = 720864;
     name = "Sébastien Bourdeauducq";
   };
+  sbond75 = {
+    name = "sbond75";
+    email = "43617712+sbond75@users.noreply.github.com";
+    github = "sbond75";
+    githubId = 43617712;
+  };
   sboosali = {
     email = "SamBoosalis@gmail.com";
     github = "sboosali";

From 3c80a19ccd8e5c4dc2b9e2d969adf7d56e23fa9d Mon Sep 17 00:00:00 2001
From: Jamie Magee <jamie.magee@gmail.com>
Date: Tue, 29 Dec 2020 18:56:49 +0100
Subject: [PATCH 02/45] pythonPackages.advantage_air: init at 0.2.2

---
 .../python-modules/advantage-air/default.nix  | 26 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  4 ++-
 2 files changed, 29 insertions(+), 1 deletion(-)
 create mode 100644 pkgs/development/python-modules/advantage-air/default.nix

diff --git a/pkgs/development/python-modules/advantage-air/default.nix b/pkgs/development/python-modules/advantage-air/default.nix
new file mode 100644
index 00000000000..4d6d91c5716
--- /dev/null
+++ b/pkgs/development/python-modules/advantage-air/default.nix
@@ -0,0 +1,26 @@
+{ aiohttp, buildPythonPackage, fetchPypi, lib, pythonOlder }:
+
+buildPythonPackage rec {
+  pname = "advantage_air";
+  version = "0.2.2";
+
+  disabled = pythonOlder "3.6";
+
+  src = fetchPypi {
+    inherit version pname;
+    sha256 = "04q2sjw9r50c00m4sfv98w9cwmmr970830c97m32p5j8ijb10j5x";
+  };
+
+  propagatedBuildInputs = [ aiohttp ];
+
+  # No tests
+  doCheck = false;
+  pythonImportsCheck = [ "advantage_air" ];
+
+  meta = with lib; {
+    description = "API helper for Advantage Air's MyAir and e-zone API";
+    homepage = "https://github.com/Bre77/advantage_air";
+    license = licenses.mit;
+    maintainers = with maintainers; [ jamiemagee ];
+  };
+}
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 80f5f6cab1c..d0957281eab 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -169,7 +169,9 @@ in {
 
   addic7ed-cli = callPackage ../development/python-modules/addic7ed-cli { };
 
-  adguardhome= callPackage ../development/python-modules/adguardhome { };
+  adguardhome = callPackage ../development/python-modules/adguardhome { };
+
+  advantage-air = callPackage ../development/python-modules/advantage-air { };
 
   aenum = callPackage ../development/python-modules/aenum { };
 

From 43351b93e99e46de43075d5fa03e18935205c1c7 Mon Sep 17 00:00:00 2001
From: Jamie Magee <jamie.magee@gmail.com>
Date: Tue, 29 Dec 2020 19:13:11 +0100
Subject: [PATCH 03/45] home-assistant: update component-packages

---
 pkgs/servers/home-assistant/component-packages.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix
index 9135ea549f3..d8353d356c1 100644
--- a/pkgs/servers/home-assistant/component-packages.nix
+++ b/pkgs/servers/home-assistant/component-packages.nix
@@ -11,7 +11,7 @@
     "actiontec" = ps: with ps; [ ];
     "adguard" = ps: with ps; [ adguardhome ];
     "ads" = ps: with ps; [ pyads ];
-    "advantage_air" = ps: with ps; [ ]; # missing inputs: advantage_air
+    "advantage_air" = ps: with ps; [ advantage_air ];
     "aftership" = ps: with ps; [ pyaftership ];
     "agent_dvr" = ps: with ps; [ ]; # missing inputs: agent-py
     "air_quality" = ps: with ps; [ ];

From a1e9a94785cf885487d823790aa82dc82fe5924c Mon Sep 17 00:00:00 2001
From: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
Date: Sun, 3 Jan 2021 12:52:03 +0100
Subject: [PATCH 04/45] imv: 4.1.0 -> 4.2.0

* switch build system to wayland
* enable all backends by adding the following to buildInputs as meson
  autodetects which backends are available.
  * libtiff
  * libheif
  * libpng

Open questions:

* imv prints a warning from the tiff backend everytime a non tiff file
  is opened: Is this normal? Seems harmless enough though.
* Should we make backends configurable / optional? I readded some
  backends which apparently were removed, but still given as an argument
  to the derivation.

Resolves #108185.
---
 pkgs/applications/graphics/imv/default.nix | 24 +++++++++++++++-------
 1 file changed, 17 insertions(+), 7 deletions(-)

diff --git a/pkgs/applications/graphics/imv/default.nix b/pkgs/applications/graphics/imv/default.nix
index faf74873058..9b69aa9ec0f 100644
--- a/pkgs/applications/graphics/imv/default.nix
+++ b/pkgs/applications/graphics/imv/default.nix
@@ -18,20 +18,30 @@
 , pkgconfig
 , stdenv
 , wayland
+, meson
+, ninja
+, inih
 }:
 
 stdenv.mkDerivation rec {
   pname = "imv";
-  version = "4.1.0";
+  version = "4.2.0";
 
   src = fetchFromGitHub {
     owner = "eXeC64";
     repo = "imv";
     rev = "v${version}";
-    sha256 = "0gk8g178i961nn3bls75a8qpv6wvfvav6hd9lxca1skaikd33zdx";
+    sha256 = "07pcpppmfvvj0czfvp1cyq03ha0jdj4whl13lzvw37q3vpxs5qqh";
   };
 
-  nativeBuildInputs = [ asciidoc cmocka docbook_xsl libxslt ];
+  nativeBuildInputs = [
+    asciidoc
+    cmocka
+    docbook_xsl
+    libxslt
+    meson
+    ninja
+  ];
 
   buildInputs = [
     freeimage
@@ -44,12 +54,12 @@ stdenv.mkDerivation rec {
     pango
     pkgconfig
     wayland
+    inih
+    libtiff
+    libheif
+    libpng
   ];
 
-  installFlags = [ "PREFIX=$(out)" "CONFIGPREFIX=$(out)/etc" ];
-
-  makeFlags = [ "BACKEND_LIBJPEG=yes" "BACKEND_LIBNSGIF=yes" ];
-
   postFixup = ''
     # The `bin/imv` script assumes imv-wayland or imv-x11 in PATH,
     # so we have to fix those to the binaries we installed into the /nix/store

From 792dacacd58b7259da997c6784fa1d22f028fae4 Mon Sep 17 00:00:00 2001
From: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
Date: Sun, 20 Dec 2020 21:58:42 +0100
Subject: [PATCH 05/45] libschrift: init at 0.9.1

Building a shared object file is probably not necessary since libschrift
has no dependencies and is pretty small.
---
 .../libraries/libschrift/default.nix          | 28 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 30 insertions(+)
 create mode 100644 pkgs/development/libraries/libschrift/default.nix

diff --git a/pkgs/development/libraries/libschrift/default.nix b/pkgs/development/libraries/libschrift/default.nix
new file mode 100644
index 00000000000..a06f6c50d66
--- /dev/null
+++ b/pkgs/development/libraries/libschrift/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  pname = "libschrift";
+  version = "0.9.1";
+
+  src = fetchFromGitHub {
+    owner = "tomolt";
+    repo = pname;
+    rev = "c6d20460d6e602e8829d3a227fd7be4c4c3cda86";
+    hash = "sha256-BuTmWaWFZ0DXujlbhbmK3Woit8fR9F4DWmKszHX6gOI=";
+  };
+
+  postPatch = ''
+    substituteInPlace config.mk \
+      --replace "PREFIX = /usr/local" "PREFIX = $out"
+  '';
+
+  makeFlags = [ "libschrift.a" ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/tomolt/libschrift";
+    description = "A lightweight TrueType font rendering library";
+    license = licenses.isc;
+    platforms = platforms.all;
+    maintainers = [ maintainers.sternenseemann ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 4cdf4ec1650..eb3d101e0e5 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -14608,6 +14608,8 @@ in
 
   libs3 = callPackage ../development/libraries/libs3 { };
 
+  libschrift = callPackage ../development/libraries/libschrift { };
+
   libsearpc = callPackage ../development/libraries/libsearpc { };
 
   libsigcxx = callPackage ../development/libraries/libsigcxx { };

From 30ccbe8eec38870db7fc6d1e7c173e92fb835c96 Mon Sep 17 00:00:00 2001
From: Patryk Wychowaniec <wychowaniec.patryk@gmail.com>
Date: Mon, 4 Jan 2021 10:59:19 +0100
Subject: [PATCH 06/45] nixos/lxd: disable cgroup v2 when LXD is active

---
 nixos/modules/virtualisation/lxd.nix | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/nixos/modules/virtualisation/lxd.nix b/nixos/modules/virtualisation/lxd.nix
index 3958fc2c1d7..103e689abae 100644
--- a/nixos/modules/virtualisation/lxd.nix
+++ b/nixos/modules/virtualisation/lxd.nix
@@ -100,6 +100,10 @@ in
       packages = [ cfg.lxcPackage ];
     };
 
+    # TODO: remove once LXD gets proper support for cgroupsv2
+    # (currently most of the e.g. CPU accounting stuff doesn't work)
+    systemd.enableUnifiedCgroupHierarchy = false;
+
     systemd.services.lxd = {
       description = "LXD Container Management Daemon";
 

From fac1372074a8f6dcb6825b046ab95bfe9c2e9000 Mon Sep 17 00:00:00 2001
From: MarcFontaine <MarcFontaine@users.noreply.github.com>
Date: Wed, 30 Dec 2020 00:23:25 +0100
Subject: [PATCH 07/45] pcimem: init at unstable-2018-08-29

This commit adds the pcimem tool.
pcimem is a simple method of reading and writing to memory registers on a PCI card.
Compared to pkgs.devmem2, it does not work on the total memory space
of the machine but restricts access to just one PCI resource.
---
 pkgs/os-specific/linux/pcimem/default.nix | 30 +++++++++++++++++++++++
 pkgs/top-level/all-packages.nix           |  2 ++
 2 files changed, 32 insertions(+)
 create mode 100644 pkgs/os-specific/linux/pcimem/default.nix

diff --git a/pkgs/os-specific/linux/pcimem/default.nix b/pkgs/os-specific/linux/pcimem/default.nix
new file mode 100644
index 00000000000..b559bd98b9c
--- /dev/null
+++ b/pkgs/os-specific/linux/pcimem/default.nix
@@ -0,0 +1,30 @@
+{ stdenv, fetchFromGitHub }:
+
+stdenv.mkDerivation rec {
+  pname = "pcimem";
+  version = "unstable-2018-08-29";
+
+  src = fetchFromGitHub {
+    owner = "billfarrow";
+    repo = pname;
+    rev = "09724edb1783a98da2b7ae53c5aaa87493aabc9b";
+    sha256 = "0zlbvcl5q4hgna11p3w00px1p8qgn8ga79lh6a2m7d597g86kbq3";
+  };
+
+  outputs = [ "out" "doc" ];
+
+  makeFlags = [ "CFLAGS=-Wno-maybe-uninitialized" ];
+
+  installPhase = ''
+    install -D pcimem "$out/bin/pcimem"
+    install -D README "$doc/doc/README"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Simple method of reading and writing to memory registers on a PCI card";
+    homepage = "https://github.com/billfarrow/pcimem";
+    license = licenses.gpl2Only;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ mafo ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index bc1ddfa20e9..69587e0bf17 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -6527,6 +6527,8 @@ in
 
   pbzip2 = callPackage ../tools/compression/pbzip2 { };
 
+  pcimem = callPackage ../os-specific/linux/pcimem { };
+
   pciutils = callPackage ../tools/system/pciutils { };
 
   pcsclite = callPackage ../tools/security/pcsclite {

From c391b303caee60cd80104d6fa99ef7bd7a0e6d2d Mon Sep 17 00:00:00 2001
From: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
Date: Mon, 4 Jan 2021 14:41:45 +0100
Subject: [PATCH 08/45] imv: use substituteInPlace

---
 pkgs/applications/graphics/imv/default.nix | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/graphics/imv/default.nix b/pkgs/applications/graphics/imv/default.nix
index 9b69aa9ec0f..f133dde6e4b 100644
--- a/pkgs/applications/graphics/imv/default.nix
+++ b/pkgs/applications/graphics/imv/default.nix
@@ -64,8 +64,9 @@ stdenv.mkDerivation rec {
     # The `bin/imv` script assumes imv-wayland or imv-x11 in PATH,
     # so we have to fix those to the binaries we installed into the /nix/store
 
-    sed -i "s|\bimv-wayland\b|$out/bin/imv-wayland|" $out/bin/imv
-    sed -i "s|\bimv-x11\b|$out/bin/imv-x11|" $out/bin/imv
+    substituteInPlace "$out/bin/imv" \
+      --replace "imv-wayland" "$out/bin/imv-wayland" \
+      --replace "imv-x11" "$out/bin/imv-x11"
   '';
 
   doCheck = true;

From b374d993edce3775c879bbd3d4abdd33051c6966 Mon Sep 17 00:00:00 2001
From: Daniel Nagy <danielnagy@posteo.de>
Date: Mon, 4 Jan 2021 15:37:23 +0100
Subject: [PATCH 09/45] ceph: enable aarch64-linux platform

---
 pkgs/tools/filesystems/ceph/default.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/tools/filesystems/ceph/default.nix b/pkgs/tools/filesystems/ceph/default.nix
index 1a43d792ad3..d87c6331b79 100644
--- a/pkgs/tools/filesystems/ceph/default.nix
+++ b/pkgs/tools/filesystems/ceph/default.nix
@@ -81,7 +81,7 @@ let
      inherit description;
      license = with licenses; [ lgpl21 gpl2 bsd3 mit publicDomain ];
      maintainers = with maintainers; [ adev ak johanot krav ];
-     platforms = [ "x86_64-linux" ];
+     platforms = [ "x86_64-linux" "aarch64-linux" ];
    };
 
   ceph-common = python3Packages.buildPythonPackage rec{

From 4f927ee34182154535e24cb7b8ed75a849609638 Mon Sep 17 00:00:00 2001
From: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
Date: Mon, 4 Jan 2021 15:07:52 +0100
Subject: [PATCH 10/45] imv: make every backend and window system configurable

The following new derivation inputs are added:
* withBackends: a list of all backends to enable. The valid names are
  the same as specified in imv's meson_options.txt. Default is to enable
  all 7 backends: freeimage, libtiff, libjpeg(_turbo), libpng, librsvg,
  libnsgif and libheif
* withWindowSystem: either all, x11 or wayland to describe window system
  support.
---
 pkgs/applications/graphics/imv/default.nix | 82 +++++++++++++++-------
 1 file changed, 56 insertions(+), 26 deletions(-)

diff --git a/pkgs/applications/graphics/imv/default.nix b/pkgs/applications/graphics/imv/default.nix
index f133dde6e4b..71e156881c4 100644
--- a/pkgs/applications/graphics/imv/default.nix
+++ b/pkgs/applications/graphics/imv/default.nix
@@ -1,28 +1,60 @@
-{ asciidoc
+{ stdenv
+, lib
+, fetchFromGitHub
+, asciidoc
 , cmocka
 , docbook_xsl
-, fetchFromGitHub
+, libxslt
 , fontconfig
-, freeimage
+, meson
+, ninja
+, pkgconfig
 , icu
+, pango
+, inih
+, withWindowSystem ? "all"
+, xorg
+, libxkbcommon
 , libGLU
-, libheif
+, wayland
+, withBackends ? [ "freeimage" "libtiff" "libjpeg" "libpng" "librsvg" "libnsgif" "libheif" ]
+, freeimage
+, libtiff
 , libjpeg_turbo
 , libpng
 , librsvg
-, libtiff
-, libxkbcommon
-, libxslt
 , netsurf
-, pango
-, pkgconfig
-, stdenv
-, wayland
-, meson
-, ninja
-, inih
+, libheif
 }:
 
+let
+  windowSystems = {
+    all = windowSystems.x11 ++ windowSystems.wayland;
+    x11 = [ libGLU xorg.libxcb xorg.libX11 ];
+    wayland = [ wayland ];
+  };
+
+  backends = {
+    inherit freeimage libtiff libpng librsvg libheif;
+    libjpeg = libjpeg_turbo;
+    inherit (netsurf) libnsgif;
+  };
+
+  backendFlags = builtins.map
+    (b: if builtins.elem b withBackends
+        then "-D${b}=enabled"
+        else "-D${b}=disabled")
+    (builtins.attrNames backends);
+in
+
+# check that given window system is valid
+assert lib.assertOneOf "withWindowSystem" withWindowSystem
+  (builtins.attrNames windowSystems);
+# check that every given backend is valid
+assert builtins.all
+  (b: lib.assertOneOf "each backend" b (builtins.attrNames backends))
+  withBackends;
+
 stdenv.mkDerivation rec {
   pname = "imv";
   version = "4.2.0";
@@ -34,6 +66,12 @@ stdenv.mkDerivation rec {
     sha256 = "07pcpppmfvvj0czfvp1cyq03ha0jdj4whl13lzvw37q3vpxs5qqh";
   };
 
+  mesonFlags = [
+    "-Dwindows=${withWindowSystem}"
+    "-Dtest=enabled"
+    "-Dman=enabled"
+  ] ++ backendFlags;
+
   nativeBuildInputs = [
     asciidoc
     cmocka
@@ -41,26 +79,18 @@ stdenv.mkDerivation rec {
     libxslt
     meson
     ninja
+    pkgconfig
   ];
 
   buildInputs = [
-    freeimage
     icu
-    libGLU
-    libjpeg_turbo
-    librsvg
     libxkbcommon
-    netsurf.libnsgif
     pango
-    pkgconfig
-    wayland
     inih
-    libtiff
-    libheif
-    libpng
-  ];
+  ] ++ windowSystems."${withWindowSystem}"
+    ++ builtins.map (b: backends."${b}") withBackends;
 
-  postFixup = ''
+  postFixup = lib.optionalString (withWindowSystem == "all") ''
     # The `bin/imv` script assumes imv-wayland or imv-x11 in PATH,
     # so we have to fix those to the binaries we installed into the /nix/store
 

From 1a828f66dc7fad2a44b2e022251d797893af7a70 Mon Sep 17 00:00:00 2001
From: Aaron Andersen <aaron@fosslib.net>
Date: Mon, 4 Jan 2021 19:47:32 -0500
Subject: [PATCH 11/45] nixos/redis: replace extraConfig option with settings
 option

---
 nixos/modules/services/databases/redis.nix | 76 ++++++++++++++--------
 1 file changed, 48 insertions(+), 28 deletions(-)

diff --git a/nixos/modules/services/databases/redis.nix b/nixos/modules/services/databases/redis.nix
index 6b8853ae390..9628d30e76a 100644
--- a/nixos/modules/services/databases/redis.nix
+++ b/nixos/modules/services/databases/redis.nix
@@ -4,31 +4,16 @@ with lib;
 
 let
   cfg = config.services.redis;
-  redisBool = b: if b then "yes" else "no";
-  condOption = name: value: if value != null then "${name} ${toString value}" else "";
 
-  redisConfig = pkgs.writeText "redis.conf" ''
-    port ${toString cfg.port}
-    ${condOption "bind" cfg.bind}
-    ${condOption "unixsocket" cfg.unixSocket}
-    daemonize no
-    supervised systemd
-    loglevel ${cfg.logLevel}
-    logfile ${cfg.logfile}
-    syslog-enabled ${redisBool cfg.syslog}
-    databases ${toString cfg.databases}
-    ${concatMapStrings (d: "save ${toString (builtins.elemAt d 0)} ${toString (builtins.elemAt d 1)}\n") cfg.save}
-    dbfilename dump.rdb
-    dir /var/lib/redis
-    ${if cfg.slaveOf != null then "slaveof ${cfg.slaveOf.ip} ${toString cfg.slaveOf.port}" else ""}
-    ${condOption "masterauth" cfg.masterAuth}
-    ${condOption "requirepass" cfg.requirePass}
-    appendOnly ${redisBool cfg.appendOnly}
-    appendfsync ${cfg.appendFsync}
-    slowlog-log-slower-than ${toString cfg.slowLogLogSlowerThan}
-    slowlog-max-len ${toString cfg.slowLogMaxLen}
-    ${cfg.extraConfig}
-  '';
+  mkValueString = value:
+    if value == true then "yes"
+    else if value == false then "no"
+    else generators.mkValueStringDefault { } value;
+
+  redisConfig = pkgs.writeText "redis.conf" (generators.toKeyValue {
+    listsAsDuplicateKeys = true;
+    mkKeyValue = generators.mkKeyValueDefault { inherit mkValueString; } " ";
+  } cfg.settings);
 in
 {
   imports = [
@@ -37,6 +22,7 @@ in
     (mkRemovedOptionModule [ "services" "redis" "dbFilename" ] "The redis module now uses /var/lib/redis/dump.rdb as database dump location.")
     (mkRemovedOptionModule [ "services" "redis" "appendOnlyFilename" ] "This option was never used.")
     (mkRemovedOptionModule [ "services" "redis" "pidFile" ] "This option was removed.")
+    (mkRemovedOptionModule [ "services" "redis" "extraConfig" ] "Use services.redis.settings instead.")
   ];
 
   ###### interface
@@ -191,10 +177,20 @@ in
         description = "Maximum number of items to keep in slow log.";
       };
 
-      extraConfig = mkOption {
-        type = types.lines;
-        default = "";
-        description = "Extra configuration options for redis.conf.";
+      settings = mkOption {
+        type = with types; attrsOf (oneOf [ bool int str (listOf str) ]);
+        default = {};
+        description = ''
+          Redis configuration. Refer to
+          <link xlink:href="https://redis.io/topics/config"/>
+          for details on supported values.
+        '';
+        example = literalExample ''
+          {
+            unixsocketperm = "700";
+            loadmodule = [ "/path/to/my_module.so" "/path/to/other_module.so" ];
+          }
+        '';
       };
     };
 
@@ -225,6 +221,30 @@ in
 
     environment.systemPackages = [ cfg.package ];
 
+    services.redis.settings = mkMerge [
+      {
+        port = cfg.port;
+        daemonize = false;
+        supervised = "systemd";
+        loglevel = cfg.logLevel;
+        logfile = cfg.logfile;
+        syslog-enabled = cfg.syslog;
+        databases = cfg.databases;
+        save = map (d: "${toString (builtins.elemAt d 0)} ${toString (builtins.elemAt d 1)}") cfg.save;
+        dbfilename = "dump.rdb";
+        dir = "/var/lib/redis";
+        appendOnly = cfg.appendOnly;
+        appendfsync = cfg.appendFsync;
+        slowlog-log-slower-than = cfg.slowLogLogSlowerThan;
+        slowlog-max-len = cfg.slowLogMaxLen;
+      }
+      (mkIf (cfg.bind != null) { bind = cfg.bind; })
+      (mkIf (cfg.unixSocket != null) { unixsocket = cfg.unixSocket; })
+      (mkIf (cfg.slaveOf != null) { slaveof = "${cfg.slaveOf.ip} ${cfg.slaveOf.port}"; })
+      (mkIf (cfg.masterAuth != null) { masterauth = cfg.masterAuth; })
+      (mkIf (cfg.requirePass != null) { requirepass = cfg.requirePass; })
+    ];
+
     systemd.services.redis = {
       description = "Redis Server";
 

From 805788f40a63e65ea8e304a8965a0aba7bcc5a64 Mon Sep 17 00:00:00 2001
From: sbond75 <43617712+sbond75@users.noreply.github.com>
Date: Tue, 22 Dec 2020 23:07:35 -0500
Subject: [PATCH 12/45] cakelisp: init at 0.1.0

---
 .../compilers/cakelisp/default.nix            | 42 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 +
 2 files changed, 44 insertions(+)
 create mode 100644 pkgs/development/compilers/cakelisp/default.nix

diff --git a/pkgs/development/compilers/cakelisp/default.nix b/pkgs/development/compilers/cakelisp/default.nix
new file mode 100644
index 00000000000..500c15a2aaa
--- /dev/null
+++ b/pkgs/development/compilers/cakelisp/default.nix
@@ -0,0 +1,42 @@
+{ stdenv, fetchFromGitHub, gcc }:
+
+stdenv.mkDerivation rec {
+  pname = "cakelisp";
+  version = "0.1.0";
+
+  src = fetchFromGitHub {
+    owner = "makuto";
+    repo = "cakelisp";
+    rev = "v${version}";
+    sha256 = "126va59jy7rvy6c2wrf8j44m307f2d8jixqkc49s9wllxprj1dmg";
+  };
+
+  buildInputs = [ gcc ];
+
+  postPatch = ''
+    substituteInPlace runtime/HotReloading.cake \
+        --replace '"/usr/bin/g++"' '"${gcc}/bin/g++"'
+    substituteInPlace src/ModuleManager.cpp \
+        --replace '"/usr/bin/g++"' '"${gcc}/bin/g++"'
+  '' + stdenv.lib.optionalString stdenv.isDarwin ''
+    substituteInPlace Build.sh --replace '--export-dynamic' '-export_dynamic'
+    substituteInPlace runtime/HotReloading.cake --replace '--export-dynamic' '-export_dynamic'
+    substituteInPlace Bootstrap.cake --replace '--export-dynamic' '-export_dynamic'
+  '';
+
+  buildPhase = ''
+    ./Build.sh
+  '';
+
+  installPhase = ''
+    install -Dm755 bin/cakelisp -t $out/bin
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A performance-oriented Lisp-like language";
+    homepage = "https://github.com/makuto/cakelisp";
+    license = licenses.gpl3Plus;
+    platforms = platforms.darwin ++ platforms.linux;
+    maintainers = [ maintainers.sbond75 ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 36dafc45585..92a6f5c208b 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -8892,6 +8892,8 @@ in
     gmp-static = gmp.override { withStatic = true; };
   };
 
+  cakelisp = callPackage ../development/compilers/cakelisp { };
+
   ciao = callPackage ../development/compilers/ciao { };
 
   colm = callPackage ../development/compilers/colm { };

From 0f15ca239d19edbd84ae7638b8ecd7e222aae355 Mon Sep 17 00:00:00 2001
From: Ingo Blechschmidt <iblech@speicherleck.de>
Date: Wed, 6 Jan 2021 17:00:52 +0100
Subject: [PATCH 13/45] dsniff: unbreak the build

We revert to using GCC 9 for compilation, in order to work around a GCC 10 bug
resulting in a segfault when compiling.

The alternative would be to restrict to optimization level -O1, but this
disables fortify.
---
 pkgs/tools/networking/dsniff/default.nix | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

diff --git a/pkgs/tools/networking/dsniff/default.nix b/pkgs/tools/networking/dsniff/default.nix
index db9c608e931..3a8eab862cb 100644
--- a/pkgs/tools/networking/dsniff/default.nix
+++ b/pkgs/tools/networking/dsniff/default.nix
@@ -1,6 +1,10 @@
-{ stdenv, fetchFromGitLab, autoreconfHook, libpcap, db, glib, libnet, libnids, symlinkJoin, openssl
+{ gcc9Stdenv, lib, fetchFromGitLab, autoreconfHook, libpcap, db, glib, libnet, libnids, symlinkJoin, openssl
 , rpcsvc-proto, libtirpc, libnsl
 }:
+
+# We compile with GCC 9 since GCC 10 segfaults on the code
+# (see https://bugzilla.redhat.com/show_bug.cgi?id=1862809).
+
 let
   /*
   dsniff's build system unconditionnaly wants static libraries and does not
@@ -38,7 +42,7 @@ let
     inherit (openssl) name;
     paths = with openssl.override { static = true; }; [ out dev ];
   };
-in stdenv.mkDerivation rec {
+in gcc9Stdenv.mkDerivation rec {
   pname = "dsniff";
   version = "2.4b1";
   # upstream is so old that nearly every distribution packages the beta version.
@@ -71,7 +75,7 @@ in stdenv.mkDerivation rec {
     "--with-openssl=${ssl}"
   ];
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "collection of tools for network auditing and penetration testing";
     longDescription = ''
       dsniff, filesnarf, mailsnarf, msgsnarf, urlsnarf, and webspy passively monitor a network for interesting data (passwords, e-mail, files, etc.). arpspoof, dnsspoof, and macof facilitate the interception of network traffic normally unavailable to an attacker (e.g, due to layer-2 switching). sshmitm and webmitm implement active monkey-in-the-middle attacks against redirected SSH and HTTPS sessions by exploiting weak bindings in ad-hoc PKI.

From ab64e82e32626f6c8d484a123428f8d5f7e65fee Mon Sep 17 00:00:00 2001
From: Zeyi Fan <zeyi@fb.com>
Date: Wed, 6 Jan 2021 18:49:09 -0800
Subject: [PATCH 14/45] wezterm: add macOS support

---
 .../terminal-emulators/wezterm/default.nix    | 23 +++++++++++++++----
 pkgs/top-level/all-packages.nix               |  4 +++-
 2 files changed, 21 insertions(+), 6 deletions(-)

diff --git a/pkgs/applications/terminal-emulators/wezterm/default.nix b/pkgs/applications/terminal-emulators/wezterm/default.nix
index 35b2500c7c9..8f0c6777e37 100644
--- a/pkgs/applications/terminal-emulators/wezterm/default.nix
+++ b/pkgs/applications/terminal-emulators/wezterm/default.nix
@@ -1,4 +1,5 @@
-{ rustPlatform
+{ stdenv
+, rustPlatform
 , lib
 , fetchFromGitHub
 
@@ -8,6 +9,11 @@
 , openssl
 , perl
 
+# Apple frameworks
+, CoreGraphics
+, Cocoa
+, Foundation
+
 , dbus
 , libX11
 , xcbutil
@@ -24,7 +30,12 @@
 , zlib
 }:
 let
-  runtimeDeps = [
+  commonRuntimeDeps = [
+    zlib
+    fontconfig
+    freetype
+  ];
+  linuxRuntimeDeps = [
     libX11
     xcbutil
     libxcb
@@ -33,14 +44,14 @@ let
     libxkbcommon
     dbus
     libglvnd
-    zlib
     egl-wayland
     wayland
     libGLU
     libGL
-    fontconfig
-    freetype
   ];
+  runtimeDeps = commonRuntimeDeps
+    ++ stdenv.lib.optionals (!stdenv.isDarwin) linuxRuntimeDeps
+    ++ stdenv.lib.optionals (stdenv.isDarwin) [ Foundation CoreGraphics Cocoa ];
   pname = "wezterm";
 in
 
@@ -68,7 +79,9 @@ rustPlatform.buildRustPackage {
 
   installPhase = ''
     for artifact in wezterm wezterm-gui wezterm-mux-server strip-ansi-escapes; do
+  '' + stdenv.lib.optionalString stdenv.isLinux ''
       patchelf --set-rpath "${lib.makeLibraryPath runtimeDeps}" $releaseDir/$artifact
+  '' + ''
       install -D $releaseDir/$artifact -t $out/bin
     done
   '';
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index f008ac7b102..eef014864f2 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -811,7 +811,9 @@ in
 
   wayst = callPackage ../applications/terminal-emulators/wayst { };
 
-  wezterm = callPackage ../applications/terminal-emulators/wezterm { };
+  wezterm = callPackage ../applications/terminal-emulators/wezterm {
+    inherit (darwin.apple_sdk.frameworks) Cocoa CoreGraphics Foundation;
+  };
 
   x3270 = callPackage ../applications/terminal-emulators/x3270 { };
 

From a853e00e9d1ce8b65dbfd3bf0f51567e6669965f Mon Sep 17 00:00:00 2001
From: Mario Rodas <marsam@users.noreply.github.com>
Date: Thu, 7 Jan 2021 04:20:00 +0000
Subject: [PATCH 15/45] rubocop: 1.1.0 -> 1.8.0

---
 pkgs/development/tools/rubocop/Gemfile.lock | 22 ++++++++--------
 pkgs/development/tools/rubocop/gemset.nix   | 28 ++++++++++-----------
 2 files changed, 25 insertions(+), 25 deletions(-)

diff --git a/pkgs/development/tools/rubocop/Gemfile.lock b/pkgs/development/tools/rubocop/Gemfile.lock
index 6b6a3a99591..74ae51427a9 100644
--- a/pkgs/development/tools/rubocop/Gemfile.lock
+++ b/pkgs/development/tools/rubocop/Gemfile.lock
@@ -2,25 +2,25 @@ GEM
   remote: https://rubygems.org/
   specs:
     ast (2.4.1)
-    parallel (1.19.2)
-    parser (2.7.2.0)
+    parallel (1.20.1)
+    parser (3.0.0.0)
       ast (~> 2.4.1)
     rainbow (3.0.0)
-    regexp_parser (1.8.2)
+    regexp_parser (2.0.3)
     rexml (3.2.4)
-    rubocop (1.1.0)
+    rubocop (1.8.0)
       parallel (~> 1.10)
-      parser (>= 2.7.1.5)
+      parser (>= 3.0.0.0)
       rainbow (>= 2.2.2, < 4.0)
-      regexp_parser (>= 1.8)
+      regexp_parser (>= 1.8, < 3.0)
       rexml
-      rubocop-ast (>= 1.0.1)
+      rubocop-ast (>= 1.2.0, < 2.0)
       ruby-progressbar (~> 1.7)
-      unicode-display_width (>= 1.4.0, < 2.0)
-    rubocop-ast (1.1.0)
+      unicode-display_width (>= 1.4.0, < 3.0)
+    rubocop-ast (1.4.0)
       parser (>= 2.7.1.5)
-    ruby-progressbar (1.10.1)
-    unicode-display_width (1.7.0)
+    ruby-progressbar (1.11.0)
+    unicode-display_width (2.0.0)
 
 PLATFORMS
   ruby
diff --git a/pkgs/development/tools/rubocop/gemset.nix b/pkgs/development/tools/rubocop/gemset.nix
index c1f55f7aca2..e22424c1ae6 100644
--- a/pkgs/development/tools/rubocop/gemset.nix
+++ b/pkgs/development/tools/rubocop/gemset.nix
@@ -14,10 +14,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "17b127xxmm2yqdz146qwbs57046kn0js1h8synv01dwqz2z1kp2l";
+      sha256 = "0055br0mibnqz0j8wvy20zry548dhkakws681bhj3ycb972awkzd";
       type = "gem";
     };
-    version = "1.19.2";
+    version = "1.20.1";
   };
   parser = {
     dependencies = ["ast"];
@@ -25,10 +25,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1f7gmm60yla325wlnd3qkxs59qm2y0aan8ljpg6k18rwzrrfil6z";
+      sha256 = "1jixakyzmy0j5c1rb0fjrrdhgnyryvrr6vgcybs14jfw09akv5ml";
       type = "gem";
     };
-    version = "2.7.2.0";
+    version = "3.0.0.0";
   };
   rainbow = {
     groups = ["default"];
@@ -45,10 +45,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0x4s82lgf0l71y3xc9gp4qxkrgx1kv8f6avdqd68l46ijbyvicdm";
+      sha256 = "0zm86k9q8m5jkcnpb1f93wsvc57saldfj8czxkx1aw031i95inip";
       type = "gem";
     };
-    version = "1.8.2";
+    version = "2.0.3";
   };
   rexml = {
     groups = ["default"];
@@ -66,10 +66,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1nw87ngw4a9r3dpgykb872zcm640m7k0nk17qv537fmss2hl8shl";
+      sha256 = "12arfnsj32126ps6mxbn7dwrw43cy70sq45rm0ib7qfrmhp5qyid";
       type = "gem";
     };
-    version = "1.1.0";
+    version = "1.8.0";
   };
   rubocop-ast = {
     dependencies = ["parser"];
@@ -77,29 +77,29 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0ami6n3vnpm9y5z6wd4c6y2infijajizjjwv8fq0wrcjvr3zivzz";
+      sha256 = "1qvfp567aprjgcwj757p55ynj0dx2b3c3hd76za9z3c43sphprcj";
       type = "gem";
     };
-    version = "1.1.0";
+    version = "1.4.0";
   };
   ruby-progressbar = {
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1k77i0d4wsn23ggdd2msrcwfy0i376cglfqypkk2q77r2l3408zf";
+      sha256 = "02nmaw7yx9kl7rbaan5pl8x5nn0y4j5954mzrkzi9i3dhsrps4nc";
       type = "gem";
     };
-    version = "1.10.1";
+    version = "1.11.0";
   };
   unicode-display_width = {
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "06i3id27s60141x6fdnjn5rar1cywdwy64ilc59cz937303q3mna";
+      sha256 = "1bilbnc8j6jkb59lrf177i3p1pdyxll0n8400hzqr35vl3r3kv2m";
       type = "gem";
     };
-    version = "1.7.0";
+    version = "2.0.0";
   };
 }
\ No newline at end of file

From b9f0b2885b1986b12a1fe1e527b12d5c58e936dd Mon Sep 17 00:00:00 2001
From: Zeyi Fan <zeyi@fb.com>
Date: Wed, 6 Jan 2021 20:48:25 -0800
Subject: [PATCH 16/45] wezterm: build as macOS app

---
 .../terminal-emulators/wezterm/default.nix    | 25 +++++++++++++------
 1 file changed, 17 insertions(+), 8 deletions(-)

diff --git a/pkgs/applications/terminal-emulators/wezterm/default.nix b/pkgs/applications/terminal-emulators/wezterm/default.nix
index 8f0c6777e37..a30afa1ce68 100644
--- a/pkgs/applications/terminal-emulators/wezterm/default.nix
+++ b/pkgs/applications/terminal-emulators/wezterm/default.nix
@@ -30,12 +30,11 @@
 , zlib
 }:
 let
-  commonRuntimeDeps = [
+  runtimeDeps = [
     zlib
     fontconfig
     freetype
-  ];
-  linuxRuntimeDeps = [
+  ] ++ stdenv.lib.optionals (stdenv.isLinux) [
     libX11
     xcbutil
     libxcb
@@ -48,10 +47,11 @@ let
     wayland
     libGLU
     libGL
+  ] ++ stdenv.lib.optionals (stdenv.isDarwin) [
+    Foundation
+    CoreGraphics
+    Cocoa
   ];
-  runtimeDeps = commonRuntimeDeps
-    ++ stdenv.lib.optionals (!stdenv.isDarwin) linuxRuntimeDeps
-    ++ stdenv.lib.optionals (stdenv.isDarwin) [ Foundation CoreGraphics Cocoa ];
   pname = "wezterm";
 in
 
@@ -78,12 +78,21 @@ rustPlatform.buildRustPackage {
   buildInputs = runtimeDeps;
 
   installPhase = ''
-    for artifact in wezterm wezterm-gui wezterm-mux-server strip-ansi-escapes; do
   '' + stdenv.lib.optionalString stdenv.isLinux ''
+    for artifact in wezterm wezterm-gui wezterm-mux-server strip-ansi-escapes; do
       patchelf --set-rpath "${lib.makeLibraryPath runtimeDeps}" $releaseDir/$artifact
-  '' + ''
       install -D $releaseDir/$artifact -t $out/bin
     done
+  '' + stdenv.lib.optionalString stdenv.isDarwin ''
+  mkdir -p "$out/Applications"
+  OUT_APP="$out/Applications/WezTerm.app"
+  cp -r assets/macos/WezTerm.app "$OUT_APP"
+  rm $OUT_APP/*.dylib
+  cp -r assets/shell-integration/* "$OUT_APP"
+  cp $releaseDir/wezterm "$OUT_APP"
+  cp $releaseDir/wezterm-mux-server "$OUT_APP"
+  cp $releaseDir/wezterm-gui "$OUT_APP"
+  cp $releaseDir/strip-ansi-escapes "$OUT_APP"
   '';
 
   # prevent further changes to the RPATH

From bdf3d727ca04b98aed1f917e33ebd77176521d64 Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Tue, 5 Jan 2021 09:57:42 +1100
Subject: [PATCH 17/45] fastp: init 0.20.1

---
 .../science/biology/fastp/default.nix         | 30 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 32 insertions(+)
 create mode 100644 pkgs/applications/science/biology/fastp/default.nix

diff --git a/pkgs/applications/science/biology/fastp/default.nix b/pkgs/applications/science/biology/fastp/default.nix
new file mode 100644
index 00000000000..c68486dbcd6
--- /dev/null
+++ b/pkgs/applications/science/biology/fastp/default.nix
@@ -0,0 +1,30 @@
+{ stdenv
+, fetchFromGitHub
+, zlib
+}:
+
+stdenv.mkDerivation rec {
+  pname = "fastp";
+  version = "0.20.1";
+
+  src = fetchFromGitHub {
+    owner = "OpenGene";
+    repo = "fastp";
+    rev = "v${version}";
+    sha256 = "sha256-pANwppkO9pfV9vctB7HmNCzYRtf+Xt+5HMKzvFuvyFM=";
+  };
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    install -D fastp $out/bin/fastp
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Ultra-fast all-in-one FASTQ preprocessor";
+    license = licenses.mit;
+    homepage = "https://github.com/OpenGene/fastp";
+    maintainers = with maintainers; [ jbedo ];
+    platforms = platforms.x86_64;
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 036d4c3d590..3ca61187acf 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -26949,6 +26949,8 @@ in
 
   exonerate = callPackage ../applications/science/biology/exonerate { };
 
+  fastp = callPackage ../applications/science/biology/fastp { };
+
   hisat2 = callPackage ../applications/science/biology/hisat2 { };
 
   htslib = callPackage ../development/libraries/science/biology/htslib { };

From 66dd1123bf2e516ffce9a4e49ea77eae5dd92383 Mon Sep 17 00:00:00 2001
From: "R. RyanTM" <ryantm-bot@ryantm.com>
Date: Thu, 7 Jan 2021 09:17:40 +0000
Subject: [PATCH 18/45] obsidian: 0.10.1 -> 0.10.6

---
 pkgs/applications/misc/obsidian/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/misc/obsidian/default.nix b/pkgs/applications/misc/obsidian/default.nix
index 3379e2e9b9d..bfe215487af 100644
--- a/pkgs/applications/misc/obsidian/default.nix
+++ b/pkgs/applications/misc/obsidian/default.nix
@@ -30,12 +30,12 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "obsidian";
-  version = "0.10.1";
+  version = "0.10.6";
 
   src = fetchurl {
     url =
       "https://github.com/obsidianmd/obsidian-releases/releases/download/v${version}/obsidian-${version}.asar.gz";
-    sha256 = "wnCgW4EAcg0Oc1fqOZBYKN2g8N27riL+yonoIy0AfxA=";
+    sha256 = "KfGVc3nXu5ilYKQPLc5qaksTwsdhSVtty9CfjSoiCU8=";
   };
 
   nativeBuildInputs = [ makeWrapper graphicsmagick ];

From 4d76eb1621cd416c06d04a95f02be7895485f084 Mon Sep 17 00:00:00 2001
From: Bruno Bigras <bigras.bruno@gmail.com>
Date: Mon, 21 Dec 2020 16:34:45 -0500
Subject: [PATCH 19/45] tab-rs: init at 0.5.5

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
---
 pkgs/tools/misc/tab-rs/default.nix | 27 +++++++++++++++++++++++++++
 pkgs/top-level/all-packages.nix    |  4 ++++
 2 files changed, 31 insertions(+)
 create mode 100644 pkgs/tools/misc/tab-rs/default.nix

diff --git a/pkgs/tools/misc/tab-rs/default.nix b/pkgs/tools/misc/tab-rs/default.nix
new file mode 100644
index 00000000000..e3bd9792c45
--- /dev/null
+++ b/pkgs/tools/misc/tab-rs/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub, rustPlatform, IOKit }:
+
+rustPlatform.buildRustPackage rec {
+  pname = "tab-rs";
+  version = "0.5.5";
+
+  src = fetchFromGitHub {
+    owner = "austinjones";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "06nip7g5y7jslqj8anvn2z7w1c8yr0gl32bpnzv26xschan4gc2h";
+  };
+
+  cargoSha256 = "1clpl9fi07lms0din8f9m4y6br5jg8k5xsklsqmvgdwf83wyn321";
+
+  buildInputs = stdenv.lib.optionals stdenv.isDarwin [ IOKit ];
+
+  # many tests are failing
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    description = "Intuitive, config-driven terminal multiplexer designed for software & systems engineers";
+    homepage = "https://github.com/austinjones/tab-rs";
+    license = licenses.mit;
+    maintainers = with maintainers; [ bbigras ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index f979f56083f..71a09689fbd 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -7753,6 +7753,10 @@ in
 
   tabnine = callPackage ../development/tools/tabnine { };
 
+  tab-rs = callPackage ../tools/misc/tab-rs {
+    inherit (darwin.apple_sdk.frameworks) IOKit;
+  };
+
   t1utils = callPackage ../tools/misc/t1utils { };
 
   talkfilters = callPackage ../misc/talkfilters {};

From 5d815cce8abc0e20ba0455dd0f15080e0c3a302d Mon Sep 17 00:00:00 2001
From: Justin Humm <justin.humm@posteo.de>
Date: Tue, 5 Jan 2021 13:22:13 +0100
Subject: [PATCH 20/45] ghostwriter: 1.0.1 -> 2.0.0-rc3, build with newest
 libsForQt5

- mark as broken on darwin
- add myself as maintainer
---
 pkgs/applications/editors/ghostwriter/default.nix | 9 +++++----
 pkgs/top-level/all-packages.nix                   | 2 +-
 2 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/pkgs/applications/editors/ghostwriter/default.nix b/pkgs/applications/editors/ghostwriter/default.nix
index 8c1b95a1d26..aa67124c114 100644
--- a/pkgs/applications/editors/ghostwriter/default.nix
+++ b/pkgs/applications/editors/ghostwriter/default.nix
@@ -2,13 +2,13 @@
 
 mkDerivation rec {
   pname = "ghostwriter";
-  version = "1.8.1";
+  version = "2.0.0-rc3";
 
   src = fetchFromGitHub {
     owner = "wereturtle";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "0jc6szfh5sdnafhwsr1xv7cn1fznniq58bix41hb9wlbkvq7wzi6";
+    rev = version;
+    sha256 = "sha256-Ag97iE++f3nG2zlwqn0qxSL9RpF8O3XWH9NtQ5kFuWg=";
   };
 
   nativeBuildInputs = [ qmake pkgconfig qttools ];
@@ -20,6 +20,7 @@ mkDerivation rec {
     homepage = src.meta.homepage;
     license = licenses.gpl3Plus;
     platforms = platforms.unix;
-    maintainers = with maintainers; [ dotlambda ];
+    maintainers = with maintainers; [ dotlambda erictapen ];
+    broken = stdenv.isDarwin;
   };
 }
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index c11c82800f7..c621cd9003e 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -21506,7 +21506,7 @@ in
 
   geoipupdate = callPackage ../applications/misc/geoipupdate/default.nix { };
 
-  ghostwriter = libsForQt514.callPackage ../applications/editors/ghostwriter { };
+  ghostwriter = libsForQt5.callPackage ../applications/editors/ghostwriter { };
 
   gitweb = callPackage ../applications/version-management/git-and-tools/gitweb { };
 

From 15da30e04a8da461a3937b3a453f2b52d77ea2f8 Mon Sep 17 00:00:00 2001
From: Fabian Affolter <mail@fabian-affolter.ch>
Date: Thu, 7 Jan 2021 13:55:55 +0100
Subject: [PATCH 21/45] subjs: init at 1.0.1

---
 pkgs/tools/security/subjs/default.nix | 32 +++++++++++++++++++++++++++
 pkgs/top-level/all-packages.nix       |  2 ++
 2 files changed, 34 insertions(+)
 create mode 100644 pkgs/tools/security/subjs/default.nix

diff --git a/pkgs/tools/security/subjs/default.nix b/pkgs/tools/security/subjs/default.nix
new file mode 100644
index 00000000000..ad10ef5eaf2
--- /dev/null
+++ b/pkgs/tools/security/subjs/default.nix
@@ -0,0 +1,32 @@
+{ buildGoModule
+, fetchFromGitHub
+, stdenv
+}:
+
+buildGoModule rec {
+  pname = "subjs";
+  version = "1.0.1";
+
+  src = fetchFromGitHub {
+    owner = "lc";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "01cip5rf35dnh3l325p03y6axyqdpf48ry4zcwiyd7hlfsglbk3j";
+  };
+
+  vendorSha256 = "1y01k8pvv7y9zb15wbk068cvkx0g83484jak2dvcvghqcf5j1fr1";
+
+  buildFlagsArray = [ "-ldflags=-s -w -X main.AppVersion=${version}" ];
+
+  meta = with stdenv.lib; {
+    description = "Fetcher for Javascript files";
+    longDescription = ''
+      subjs fetches Javascript files from a list of URLs or subdomains.
+      Analyzing Javascript files can help you find undocumented endpoints,
+      secrets and more.
+    '';
+    homepage = "https://github.com/lc/subjs";
+    license = with licenses; [ mit ];
+    maintainers = with maintainers; [ fab ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 100a2aea853..d3a2df90f0f 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -7702,6 +7702,8 @@ in
 
   su = shadow.su;
 
+  subjs = callPackage ../tools/security/subjs { };
+
   subsonic = callPackage ../servers/misc/subsonic { };
 
   subfinder = callPackage ../tools/networking/subfinder { };

From 701ece608b562435374411c17b38905ac763c755 Mon Sep 17 00:00:00 2001
From: Norbert Melzer <timmelzer@gmail.com>
Date: Thu, 7 Jan 2021 15:44:51 +0100
Subject: [PATCH 22/45] lttng-ust: python2 => python3

whitespace cleanup
---
 pkgs/development/tools/misc/lttng-ust/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/development/tools/misc/lttng-ust/default.nix b/pkgs/development/tools/misc/lttng-ust/default.nix
index 1b59045c6fd..ba3930642b1 100644
--- a/pkgs/development/tools/misc/lttng-ust/default.nix
+++ b/pkgs/development/tools/misc/lttng-ust/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, liburcu, python }:
+{ stdenv, fetchurl, liburcu, python3 }:
 
 # NOTE:
 #   ./configure ...
@@ -20,12 +20,12 @@ stdenv.mkDerivation rec {
     sha256 = "0ddwk0nl28bkv2xb78gz16a2bvlpfbjmzwfbgwf5p1cq46dyvy86";
   };
 
-  buildInputs = [ python ];
+  buildInputs = [ python3 ];
 
   preConfigure = ''
     patchShebangs .
   '';
-  
+
   propagatedBuildInputs = [ liburcu ];
 
   meta = with stdenv.lib; {

From cf2c95a19f7973d1676039b19b62948cd60c18d1 Mon Sep 17 00:00:00 2001
From: Rouven Czerwinski <rouven@czerwinskis.de>
Date: Thu, 7 Jan 2021 16:39:21 +0100
Subject: [PATCH 23/45] mpris-scrobbler: init at 0.4.0.1

Minimalistic scrobbler using the the MPRIS specification to scrobble to
libre.fm and last.fm.
---
 pkgs/tools/audio/mpris-scrobbler/default.nix | 60 ++++++++++++++++++++
 pkgs/top-level/all-packages.nix              |  2 +
 2 files changed, 62 insertions(+)
 create mode 100644 pkgs/tools/audio/mpris-scrobbler/default.nix

diff --git a/pkgs/tools/audio/mpris-scrobbler/default.nix b/pkgs/tools/audio/mpris-scrobbler/default.nix
new file mode 100644
index 00000000000..b768e016643
--- /dev/null
+++ b/pkgs/tools/audio/mpris-scrobbler/default.nix
@@ -0,0 +1,60 @@
+{ stdenv
+, fetchFromGitHub
+, nix-update-script
+, curl
+, dbus
+, libevent
+, m4
+, meson
+, ninja
+, pkg-config
+, scdoc
+, json_c
+, xdg_utils
+}:
+
+stdenv.mkDerivation rec {
+  pname = "mpris-scrobbler";
+  version = "0.4.0.1";
+
+  src = fetchFromGitHub {
+    owner  = "mariusor";
+    repo   = "mpris-scrobbler";
+    rev    = "v${version}";
+    sha256 = "0jzmgcb9a19hl8y7iwy8l3cc2vgzi0scw7r5q72kszfyxn0yk2gs";
+  };
+
+  postPatch = ''
+    substituteInPlace src/signon.c \
+      --replace "/usr/bin/xdg-open" "${xdg_utils}/bin/xdg-open"
+  '';
+
+  nativeBuildInputs = [
+    m4
+    meson
+    ninja
+    pkg-config
+    scdoc
+  ];
+
+  buildInputs = [
+    curl
+    dbus
+    json_c
+    libevent
+  ];
+
+  passthru = {
+    updateScript = nix-update-script {
+      attrPath = pname;
+    };
+  };
+
+  meta = with stdenv.lib; {
+    description = "Minimalistic scrobbler for libre.fm & last.fm";
+    homepage    = "https://github.com/mariusor/mpris-scrobbler";
+    license     = licenses.mit;
+    maintainers = with maintainers; [ emantor ];
+    platforms   = platforms.unix;
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index b3d9840ab89..5d7089fa330 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -2510,6 +2510,8 @@ in
 
   mpd-mpris = callPackage ../tools/audio/mpd-mpris { };
 
+  mpris-scrobbler = callPackage ../tools/audio/mpris-scrobbler { };
+
   mq-cli = callPackage ../tools/system/mq-cli { };
 
   nextdns = callPackage ../applications/networking/nextdns { };

From c5f894866541f22b08abca79cee4a04618429a59 Mon Sep 17 00:00:00 2001
From: Luke Granger-Brown <git@lukegb.com>
Date: Thu, 7 Jan 2021 10:37:28 +0000
Subject: [PATCH 24/45] oven-media-engine: 0.10.8 -> 0.10.9-hotfix

---
 .../misc/oven-media-engine/default.nix        | 19 +++++++++++++++----
 1 file changed, 15 insertions(+), 4 deletions(-)

diff --git a/pkgs/servers/misc/oven-media-engine/default.nix b/pkgs/servers/misc/oven-media-engine/default.nix
index 7faf8a9cfee..d6bdef68732 100644
--- a/pkgs/servers/misc/oven-media-engine/default.nix
+++ b/pkgs/servers/misc/oven-media-engine/default.nix
@@ -1,5 +1,6 @@
 { stdenv
 , fetchFromGitHub
+, fetchpatch
 , srt
 , ffmpeg_3_4
 , bc
@@ -12,6 +13,7 @@
 , libopus
 , srtp
 , jemalloc
+, pcre2
 }:
 
 let
@@ -27,21 +29,30 @@ let
 in
 stdenv.mkDerivation rec {
   pname = "oven-media-engine";
-  version = "0.10.8";
+  version = "0.10.9-hotfix";
 
   src = fetchFromGitHub {
     owner = "AirenSoft";
     repo = "OvenMediaEngine";
     rev = "v${version}";
-    sha256 = "ec4yvS+4/rTBHGEx2OP0yoNGDtzPucFOcZJ0o0cCAHg=";
+    sha256 = "1fhria0vwqsgmsglv5gn858li33vfy2dwy1f1qdd2jwikskb53am";
   };
 
+  patches = [
+    (fetchpatch {
+      # Needed to fix compilation under GCC 10.
+      url = "https://github.com/AirenSoft/OvenMediaEngine/commit/ad83e1d2226445d649e4b7e0c75106e31af4940d.patch";
+      sha256 = "1zk1rgi1wsjl6gdx3hdmgxlgindv6a3lsnkwcgi87ga9abw4vafw";
+      stripLen = 1;
+    })
+  ];
+
   sourceRoot = "source/src";
   makeFlags = "release CONFIG_LIBRARY_PATHS= CONFIG_PKG_PATHS= GLOBAL_CC=$(CC) GLOBAL_CXX=$(CXX) GLOBAL_LD=$(CXX) SHELL=${stdenv.shell}";
   enableParallelBuilding = true;
 
   nativeBuildInputs = [ bc pkgconfig perl ];
-  buildInputs = [ openssl srt zlib ffmpeg libvpx libopus srtp jemalloc ];
+  buildInputs = [ openssl srt zlib ffmpeg libvpx libopus srtp jemalloc pcre2 ];
 
   preBuild = ''
     patchShebangs core/colorg++
@@ -62,7 +73,7 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "Open-source streaming video service with sub-second latency";
     homepage    = "https://ovenmediaengine.com";
-    license     = licenses.gpl2;
+    license     = licenses.gpl2Only;
     maintainers = with maintainers; [ lukegb ];
     platforms   = [ "x86_64-linux" ];
   };

From 3c21ca726640a577deb66d4df0cc3b48938458b5 Mon Sep 17 00:00:00 2001
From: Fabian Affolter <mail@fabian-affolter.ch>
Date: Thu, 7 Jan 2021 17:09:39 +0100
Subject: [PATCH 25/45] python3Packages.pylacrosse: init at 0.4

---
 .../python-modules/pylacrosse/default.nix     | 37 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  2 +
 2 files changed, 39 insertions(+)
 create mode 100644 pkgs/development/python-modules/pylacrosse/default.nix

diff --git a/pkgs/development/python-modules/pylacrosse/default.nix b/pkgs/development/python-modules/pylacrosse/default.nix
new file mode 100644
index 00000000000..74b244f5296
--- /dev/null
+++ b/pkgs/development/python-modules/pylacrosse/default.nix
@@ -0,0 +1,37 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, mock
+, nose
+, pyserial
+, pytestCheckHook
+}:
+
+buildPythonPackage rec {
+  pname = "pylacrosse";
+  version = "0.4";
+
+  src = fetchFromGitHub {
+    owner = "hthiery";
+    repo = "python-lacrosse";
+    rev = version;
+    sha256 = "0g5hqm8lq0gsnvhcydjk54rjf7lpxzph8k7w1nnvnqfbhf31xfcf";
+  };
+
+  propagatedBuildInputs = [ pyserial ];
+
+  checkInputs = [
+    mock
+    nose
+    pytestCheckHook
+  ];
+
+  pythonImportsCheck = [ "pylacrosse" ];
+
+  meta = with lib; {
+    description = "Python library for Jeelink LaCrosse";
+    homepage = "https://github.com/hthiery/python-lacrosse";
+    license = with licenses; [ lgpl2Plus ];
+    maintainers = with maintainers; [ fab ];
+  };
+}
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index ad775f0712b..86bac183f2d 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -5341,6 +5341,8 @@ in {
 
   pykwalify = callPackage ../development/python-modules/pykwalify { };
 
+  pylacrosse = callPackage ../development/python-modules/pylacrosse { };
+
   pylama = callPackage ../development/python-modules/pylama { };
 
   pylast = callPackage ../development/python-modules/pylast { };

From 897815b331da449f296917956e9f57fb0de2a7e2 Mon Sep 17 00:00:00 2001
From: Fabian Affolter <mail@fabian-affolter.ch>
Date: Thu, 7 Jan 2021 17:11:15 +0100
Subject: [PATCH 26/45] home-assistant: update component-packages

---
 pkgs/servers/home-assistant/component-packages.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix
index 6df1239537e..ea98b38500b 100644
--- a/pkgs/servers/home-assistant/component-packages.nix
+++ b/pkgs/servers/home-assistant/component-packages.nix
@@ -424,7 +424,7 @@
     "konnected" = ps: with ps; [ aiohttp-cors ]; # missing inputs: konnected
     "kulersky" = ps: with ps; [ ]; # missing inputs: pykulersky
     "kwb" = ps: with ps; [ ]; # missing inputs: pykwb
-    "lacrosse" = ps: with ps; [ ]; # missing inputs: pylacrosse
+    "lacrosse" = ps: with ps; [ pylacrosse ];
     "lametric" = ps: with ps; [ ]; # missing inputs: lmnotify
     "lannouncer" = ps: with ps; [ ];
     "lastfm" = ps: with ps; [ pylast ];

From 70e72558318b11a10152e112c743cf696d41e005 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 7 Jan 2021 17:08:11 +0000
Subject: [PATCH 27/45] mdcat: 0.22.1 -> 0.22.2

---
 pkgs/tools/text/mdcat/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/tools/text/mdcat/default.nix b/pkgs/tools/text/mdcat/default.nix
index c89d1526257..eb51ad6d260 100644
--- a/pkgs/tools/text/mdcat/default.nix
+++ b/pkgs/tools/text/mdcat/default.nix
@@ -11,19 +11,19 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "mdcat";
-  version = "0.22.1";
+  version = "0.22.2";
 
   src = fetchFromGitHub {
     owner = "lunaryorn";
     repo = pname;
     rev = "mdcat-${version}";
-    hash = "sha256-4sM1xT/JQ+yM5tZkGwK7r0gUT5so9o1MnDJ7apZkRd4=";
+    hash = "sha256-i36MYTMkbSuWxxlWUDsyYMay/4Mg7M5jEFhHM60UrkM=";
   };
 
   nativeBuildInputs = [ pkgconfig asciidoctor installShellFiles ];
   buildInputs = [ openssl ] ++ stdenv.lib.optional stdenv.isDarwin Security;
 
-  cargoSha256 = "sha256-LoNm2/6/FgTKp95ETODY39D8Ou+9X+IXIy625YW9AFI=";
+  cargoSha256 = "sha256-mnDUIJhEGNoh3eq2Vhww1T/tpZh9RP+RxbRsBNrpOzw=";
 
   checkInputs = [ ansi2html ];
   # Skip tests that use the network and that include files.

From 02e8f39c2aa2aab8d683c4908b3872fd9531bea8 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Fabian=20M=C3=B6ller?= <fabianm88@gmail.com>
Date: Thu, 7 Jan 2021 15:27:53 +0100
Subject: [PATCH 28/45] libopenshot: fix build with gcc10

---
 pkgs/applications/video/openshot-qt/libopenshot.nix | 12 ++++++++++--
 1 file changed, 10 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/video/openshot-qt/libopenshot.nix b/pkgs/applications/video/openshot-qt/libopenshot.nix
index 1b6084a1d2f..1ab7a5266a2 100644
--- a/pkgs/applications/video/openshot-qt/libopenshot.nix
+++ b/pkgs/applications/video/openshot-qt/libopenshot.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub
+{ stdenv, fetchFromGitHub, fetchpatch
 , pkgconfig, cmake, doxygen
 , libopenshot-audio, imagemagick, ffmpeg_3
 , swig, python3
@@ -19,7 +19,15 @@ stdenv.mkDerivation rec {
     sha256 = "1mxjkgjmjzgf628y3rscc6rqf55hxgjpmvwxlncfk1216i5xskwp";
   };
 
-  patchPhase = ''
+  patches = [
+    (fetchpatch {
+      name = "fix-build-with-gcc-10.patch";
+      url = "https://github.com/OpenShot/libopenshot/commit/13290364e7bea54164ab83d973951f2898ad9e23.diff";
+      sha256 = "0i7rpdsr8y9dphil8yq75qbh20vfqjc2hp5ahv0ws58z9wj6ngnz";
+    })
+  ];
+
+  postPatch = ''
     sed -i 's/{UNITTEST++_INCLUDE_DIR}/ENV{UNITTEST++_INCLUDE_DIR}/g' tests/CMakeLists.txt
     sed -i 's/{_REL_PYTHON_MODULE_PATH}/ENV{_REL_PYTHON_MODULE_PATH}/g' src/bindings/python/CMakeLists.txt
     export _REL_PYTHON_MODULE_PATH=$(toPythonPath $out)

From d4e7efc1159449225a367552b6e0e44acaa8c7e5 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Fabian=20M=C3=B6ller?= <fabianm88@gmail.com>
Date: Thu, 7 Jan 2021 16:47:11 +0100
Subject: [PATCH 29/45] openshot-qt: unbreak

---
 pkgs/applications/video/openshot-qt/default.nix | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/pkgs/applications/video/openshot-qt/default.nix b/pkgs/applications/video/openshot-qt/default.nix
index 9245bdf03e4..ede47ad061f 100644
--- a/pkgs/applications/video/openshot-qt/default.nix
+++ b/pkgs/applications/video/openshot-qt/default.nix
@@ -55,8 +55,5 @@ mkDerivationWith python3Packages.buildPythonApplication rec {
     license = with licenses; gpl3Plus;
     maintainers = with maintainers; [ AndersonTorres ];
     platforms = with platforms; unix;
-    # Cannot use a newer Qt (5.15) version because it requires qtwebkit
-    # and our qtwebkit fails to build with 5.15. 01bcfd3579219d60e5d07df309a000f96b2b658b
-    broken = true;
   };
 }

From d8306e18eaa89ed6caddfc311daeb904b7fe81eb Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Fabian=20M=C3=B6ller?= <fabianm88@gmail.com>
Date: Thu, 7 Jan 2021 16:03:21 +0100
Subject: [PATCH 30/45] qmltermwidget: fix build with gcc10

---
 pkgs/development/libraries/qmltermwidget/default.nix | 12 ++++++++++--
 1 file changed, 10 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/libraries/qmltermwidget/default.nix b/pkgs/development/libraries/qmltermwidget/default.nix
index ac258457311..53e83182c2b 100644
--- a/pkgs/development/libraries/qmltermwidget/default.nix
+++ b/pkgs/development/libraries/qmltermwidget/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, qtbase, qtquick1, qmake, qtmultimedia, utmp }:
+{ stdenv, fetchFromGitHub, qtbase, qtquick1, qmake, qtmultimedia, utmp, fetchpatch }:
 
 stdenv.mkDerivation {
   version = "2018-11-24";
@@ -15,7 +15,15 @@ stdenv.mkDerivation {
                 ++ stdenv.lib.optional stdenv.isDarwin utmp;
   nativeBuildInputs = [ qmake ];
 
-  patchPhase = ''
+  patches = [
+    (fetchpatch {
+      name = "fix-missing-includes.patch";
+      url = "https://github.com/Swordfish90/qmltermwidget/pull/27/commits/485f8d6d841b607ba49e55a791f7f587e4e193bc.diff";
+      sha256 = "186s8pv3642vr4lxsds919h0y2vrkl61r7wqq9mc4a5zk5vprinj";
+    })
+  ];
+
+  postPatch = ''
     substituteInPlace qmltermwidget.pro \
       --replace '$$[QT_INSTALL_QML]' "/$qtQmlPrefix/"
   '';

From e2945ada1388c9322017ded9d95465640e2cd1ee Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 7 Jan 2021 17:22:34 +0000
Subject: [PATCH 31/45] doctest: 2.4.1 -> 2.4.4

---
 pkgs/development/libraries/doctest/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/libraries/doctest/default.nix b/pkgs/development/libraries/doctest/default.nix
index d647d5f3888..43ca46ce551 100644
--- a/pkgs/development/libraries/doctest/default.nix
+++ b/pkgs/development/libraries/doctest/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "doctest";
-  version = "2.4.1";
+  version = "2.4.4";
 
   src = fetchFromGitHub {
     owner = "onqtam";
     repo = "doctest";
     rev = version;
-    sha256 = "17g7n6rjs90i0b231x5s934qnr8m80ga2yg1z344bnsdiqcjd63w";
+    hash = "sha256-NqXC5948prTCi4gsaR8bJPBTrmH+rJbHsGvwkJlpjXY=";
   };
 
   nativeBuildInputs = [ cmake ];

From 61759faf107cd6ba9e5db53711600c3ec9888662 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 7 Jan 2021 17:27:46 +0000
Subject: [PATCH 32/45] computecpp: 2.2.1 -> 2.3.0

---
 pkgs/development/compilers/computecpp/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/compilers/computecpp/default.nix b/pkgs/development/compilers/computecpp/default.nix
index 7cfc60f050e..acdcc2014f8 100644
--- a/pkgs/development/compilers/computecpp/default.nix
+++ b/pkgs/development/compilers/computecpp/default.nix
@@ -9,11 +9,11 @@
 
 stdenv.mkDerivation rec {
   pname = "computecpp";
-  version = "2.2.1";
+  version = "2.3.0";
 
   src = fetchzip {
     url = "https://computecpp.codeplay.com/downloads/computecpp-ce/${version}/x86_64-linux-gnu.tar.gz";
-    hash = "sha256-niXNWbkXjd35col6dS66HdxFurXfJw/Xb2c5njukxcg=";
+    hash = "sha256-AUHSls4BOX20PVKzDAp3RqpeRDwgbgYzz6CRvRN+kdk=";
     stripRoot = true;
   };
 

From d620de4a69a0e83b537ca3f982cc7ae43bb2ac32 Mon Sep 17 00:00:00 2001
From: Anthony Cowley <acowley@gmail.com>
Date: Thu, 7 Jan 2021 12:51:16 -0500
Subject: [PATCH 33/45] bibtex2html: add perl dependency

The `aux2bib` tool that is part of the bibtex2html package requires
perl. Without this dependency, the `aux2bib` script is installed with
a shebang pointing to `/usr/bin/perl`.
---
 pkgs/tools/misc/bibtex2html/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/tools/misc/bibtex2html/default.nix b/pkgs/tools/misc/bibtex2html/default.nix
index ddda4ef4445..6ca528e2b1a 100644
--- a/pkgs/tools/misc/bibtex2html/default.nix
+++ b/pkgs/tools/misc/bibtex2html/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, ocaml }:
+{ stdenv, fetchurl, ocaml, perl }:
 
 stdenv.mkDerivation {
   pname = "bibtex2html";
@@ -9,7 +9,7 @@ stdenv.mkDerivation {
     sha256 = "07gzrs4lfrkvbn48cgn2gn6c7cx3jsanakkrb2irj0gmjzfxl96j";
   };
 
-  buildInputs = [ ocaml ];
+  buildInputs = [ ocaml perl ];
 
   meta = with stdenv.lib; {
     description = "A collection of tools for translating from BibTeX to HTML";

From 1976d796271408268da6df07c9047debcecf970e Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= <joerg@thalheim.io>
Date: Thu, 7 Jan 2021 13:55:04 +0100
Subject: [PATCH 34/45] tensorflow: drop 1.x

it no longer works without our default python version and needs
many patches to compile.
---
 .../tensorflow-estimator/1/default.nix        |  30 --
 .../tensorflow-estimator/{2 => }/default.nix  |   0
 .../{2 => }/default.nix                       |   0
 .../python-modules/tensorflow/1/bin.nix       | 120 -----
 .../tensorflow/1/binary-hashes.nix            |  43 --
 .../python-modules/tensorflow/1/default.nix   | 456 ------------------
 .../tensorflow/1/lift-gast-restriction.patch  |  13 -
 .../python-modules/tensorflow/1/prefetcher.sh |  33 --
 .../python-modules/tensorflow/{2 => }/bin.nix |   0
 .../tensorflow/{2 => }/binary-hashes.nix      |   0
 .../tensorflow/cuda-10.2-no-bin2c-path.patch  |  10 -
 .../tensorflow/{2 => }/default.nix            |   2 +-
 .../tensorflow/no-saved-proto.patch           |  14 -
 .../tensorflow/{2 => }/prefetcher.sh          |   0
 .../{2 => }/relax-dependencies.patch          |   0
 pkgs/top-level/python-packages.nix            |  41 +-
 16 files changed, 10 insertions(+), 752 deletions(-)
 delete mode 100644 pkgs/development/python-modules/tensorflow-estimator/1/default.nix
 rename pkgs/development/python-modules/tensorflow-estimator/{2 => }/default.nix (100%)
 rename pkgs/development/python-modules/tensorflow-tensorboard/{2 => }/default.nix (100%)
 delete mode 100644 pkgs/development/python-modules/tensorflow/1/bin.nix
 delete mode 100644 pkgs/development/python-modules/tensorflow/1/binary-hashes.nix
 delete mode 100644 pkgs/development/python-modules/tensorflow/1/default.nix
 delete mode 100644 pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch
 delete mode 100755 pkgs/development/python-modules/tensorflow/1/prefetcher.sh
 rename pkgs/development/python-modules/tensorflow/{2 => }/bin.nix (100%)
 rename pkgs/development/python-modules/tensorflow/{2 => }/binary-hashes.nix (100%)
 delete mode 100644 pkgs/development/python-modules/tensorflow/cuda-10.2-no-bin2c-path.patch
 rename pkgs/development/python-modules/tensorflow/{2 => }/default.nix (99%)
 delete mode 100644 pkgs/development/python-modules/tensorflow/no-saved-proto.patch
 rename pkgs/development/python-modules/tensorflow/{2 => }/prefetcher.sh (100%)
 rename pkgs/development/python-modules/tensorflow/{2 => }/relax-dependencies.patch (100%)

diff --git a/pkgs/development/python-modules/tensorflow-estimator/1/default.nix b/pkgs/development/python-modules/tensorflow-estimator/1/default.nix
deleted file mode 100644
index c34d6948d89..00000000000
--- a/pkgs/development/python-modules/tensorflow-estimator/1/default.nix
+++ /dev/null
@@ -1,30 +0,0 @@
-{ stdenv, fetchPypi, buildPythonPackage
-, numpy
-, absl-py
-, mock
-}:
-
-buildPythonPackage rec {
-  pname = "tensorflow-estimator";
-  # This is effectively 1.15.0. Upstream tagged 1.15.0 by mistake before
-  # actually updating the version in setup.py, which is why this tag is called
-  # 1.15.1.
-  version = "1.15.1";
-  format = "wheel";
-
-  src = fetchPypi {
-    pname = "tensorflow_estimator";
-    inherit version format;
-    sha256 = "1fc61wmc0w22frs79j2x4g6wnv5g21xc6rix1g4bsvy9qfvvylw8";
-  };
-
-  propagatedBuildInputs = [ mock numpy absl-py ];
-
-  meta = with stdenv.lib; {
-    description = "TensorFlow Estimator is a high-level API that encapsulates model training, evaluation, prediction, and exporting.";
-    homepage = "http://tensorflow.org";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ jyp ];
-  };
-}
-
diff --git a/pkgs/development/python-modules/tensorflow-estimator/2/default.nix b/pkgs/development/python-modules/tensorflow-estimator/default.nix
similarity index 100%
rename from pkgs/development/python-modules/tensorflow-estimator/2/default.nix
rename to pkgs/development/python-modules/tensorflow-estimator/default.nix
diff --git a/pkgs/development/python-modules/tensorflow-tensorboard/2/default.nix b/pkgs/development/python-modules/tensorflow-tensorboard/default.nix
similarity index 100%
rename from pkgs/development/python-modules/tensorflow-tensorboard/2/default.nix
rename to pkgs/development/python-modules/tensorflow-tensorboard/default.nix
diff --git a/pkgs/development/python-modules/tensorflow/1/bin.nix b/pkgs/development/python-modules/tensorflow/1/bin.nix
deleted file mode 100644
index 5c93e957f7c..00000000000
--- a/pkgs/development/python-modules/tensorflow/1/bin.nix
+++ /dev/null
@@ -1,120 +0,0 @@
-{ stdenv
-, lib
-, fetchurl
-, buildPythonPackage
-, isPy3k, pythonOlder, pythonAtLeast
-, astor
-, gast
-, google-pasta
-, wrapt
-, numpy
-, six
-, termcolor
-, protobuf
-, absl-py
-, grpcio
-, mock
-, backports_weakref
-, tensorflow-estimator_1
-, tensorflow-tensorboard
-, cudaSupport ? false
-, cudatoolkit ? null
-, cudnn ? null
-, nvidia_x11 ? null
-, zlib
-, python
-, symlinkJoin
-, keras-applications
-, keras-preprocessing
-, addOpenGLRunpath
-}:
-
-# We keep this binary build for two reasons:
-# - the source build doesn't work on Darwin.
-# - the source build is currently brittle and not easy to maintain
-
-assert cudaSupport -> cudatoolkit != null
-                   && cudnn != null
-                   && nvidia_x11 != null;
-
-# unsupported combination
-assert ! (stdenv.isDarwin && cudaSupport);
-
-let
-  packages = import ./binary-hashes.nix;
-
-  variant = if cudaSupport then "-gpu" else "";
-  pname = "tensorflow${variant}";
-
-in buildPythonPackage {
-  inherit pname;
-  inherit (packages) version;
-  format = "wheel";
-  disabled = pythonAtLeast "3.8";
-
-  src = let
-    pyVerNoDot = lib.strings.stringAsChars (x: if x == "." then "" else x) python.pythonVersion;
-    pyver = if stdenv.isDarwin then builtins.substring 0 1 pyVerNoDot else pyVerNoDot;
-    platform = if stdenv.isDarwin then "mac" else "linux";
-    unit = if cudaSupport then "gpu" else "cpu";
-    key = "${platform}_py_${pyver}_${unit}";
-  in fetchurl packages.${key};
-
-  propagatedBuildInputs = [
-    protobuf
-    numpy
-    termcolor
-    grpcio
-    six
-    astor
-    absl-py
-    gast
-    google-pasta
-    wrapt
-    tensorflow-estimator_1
-    tensorflow-tensorboard
-    keras-applications
-    keras-preprocessing
-  ] ++ lib.optional (!isPy3k) mock
-    ++ lib.optionals (pythonOlder "3.4") [ backports_weakref ];
-
-  nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath;
-
-  # Upstream has a pip hack that results in bin/tensorboard being in both tensorflow
-  # and the propageted input tensorflow-tensorboard which causes environment collisions.
-  # another possibility would be to have tensorboard only in the buildInputs
-  # https://github.com/tensorflow/tensorflow/blob/v1.7.1/tensorflow/tools/pip_package/setup.py#L79
-  postInstall = ''
-    rm $out/bin/tensorboard
-  '';
-
-  # Note that we need to run *after* the fixup phase because the
-  # libraries are loaded at runtime. If we run in preFixup then
-  # patchelf --shrink-rpath will remove the cuda libraries.
-  postFixup = let
-    rpath = stdenv.lib.makeLibraryPath
-      ([ stdenv.cc.cc.lib zlib ] ++ lib.optionals cudaSupport [ cudatoolkit.out cudatoolkit.lib cudnn nvidia_x11 ]);
-  in
-  lib.optionalString stdenv.isLinux ''
-    rrPath="$out/${python.sitePackages}/tensorflow/:$out/${python.sitePackages}/tensorflow/contrib/tensor_forest/:${rpath}"
-    internalLibPath="$out/${python.sitePackages}/tensorflow/python/_pywrap_tensorflow_internal.so"
-    find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
-      patchelf --set-rpath "$rrPath" "$lib"
-      ${lib.optionalString cudaSupport ''
-        addOpenGLRunpath "$lib"
-      ''}
-    done
-  '';
-
-
-  meta = with stdenv.lib; {
-    description = "Computation using data flow graphs for scalable machine learning";
-    homepage = "http://tensorflow.org";
-    license = licenses.asl20;
-    maintainers = with maintainers; [ jyp abbradar ];
-    platforms = [ "x86_64-linux" "x86_64-darwin" ];
-    # Python 2.7 build uses different string encoding.
-    # See https://github.com/NixOS/nixpkgs/pull/37044#issuecomment-373452253
-    broken = stdenv.isDarwin && !isPy3k;
-  };
-}
diff --git a/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix b/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix
deleted file mode 100644
index fa4809dc3f1..00000000000
--- a/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix
+++ /dev/null
@@ -1,43 +0,0 @@
-{
-version = "1.14.0";
-linux_py_27_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp27-none-linux_x86_64.whl";
-  sha256 = "0yywdrfk97dh1bxhibspg0raz70fx9lcczj6xlimqy4xb60clx7k";
-};
-linux_py_35_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp35-cp35m-linux_x86_64.whl";
-  sha256 = "1xvyb6xcrjhlwvrmrhn5vs9xy7g98smqmpv4i3hhpry4qyasphhj";
-};
-linux_py_36_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp36-cp36m-linux_x86_64.whl";
-  sha256 = "1psd9vyxz9f39dwj77nvrg373sxv3p5vdp9fnz81dpsm0b0mwl44";
-};
-linux_py_37_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp37-cp37m-linux_x86_64.whl";
-  sha256 = "0bg2sb1n2ag27r7ww695kg5hb0mjrw4kc5893krmixx2j71860c5";
-};
-linux_py_27_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp27-none-linux_x86_64.whl";
-  sha256 = "0y1x91gayg6pjddgl8ndcm63wfzhyv4s5khgl7ffzsgni1ivaqw5";
-};
-linux_py_35_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp35-cp35m-linux_x86_64.whl";
-  sha256 = "03piggpbz1jx8m2b95spq3jrdff4w6xx63ji07am7hyw2nsgx3mx";
-};
-linux_py_36_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp36-cp36m-linux_x86_64.whl";
-  sha256 = "0ypkp8cfhharsyyikb1qgf44cfm6284km9xswzvzymjzz75vg3gd";
-};
-linux_py_37_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp37-cp37m-linux_x86_64.whl";
-  sha256 = "0virp8nn2ysx4855hq29kas6fm6b3dsiybwzdxy9nnb9n2d8qlm2";
-};
-mac_py_2_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-1.14.0-py2-none-any.whl";
-  sha256 = "14f86k3pgq7z6i4s4im55zpp38f0drnm7xlclavsgcc0nxnj3z26";
-};
-mac_py_3_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-1.14.0-py3-none-any.whl";
-  sha256 = "0f3swpcjfgqhj6h5wnx8snc0xjkx4hnkqx83fmlrwpncs8c131d3";
-};
-}
diff --git a/pkgs/development/python-modules/tensorflow/1/default.nix b/pkgs/development/python-modules/tensorflow/1/default.nix
deleted file mode 100644
index 4dd30e4687a..00000000000
--- a/pkgs/development/python-modules/tensorflow/1/default.nix
+++ /dev/null
@@ -1,456 +0,0 @@
-{ stdenv, pkgs, bazel_0_26, buildBazelPackage, lib, fetchFromGitHub, fetchpatch, symlinkJoin
-, addOpenGLRunpath
-# Python deps
-, buildPythonPackage, isPy3k, isPy27, pythonOlder, pythonAtLeast, python
-# Python libraries
-, numpy, tensorflow-tensorboard_1, backports_weakref, mock, enum34, absl-py
-, future, setuptools, wheel, keras-preprocessing, keras-applications, google-pasta
-, functools32
-, opt-einsum
-, termcolor, grpcio, six, wrapt, protobuf, tensorflow-estimator_1
-# Common deps
-, git, swig, which, binutils, glibcLocales, cython
-# Common libraries
-, jemalloc, openmpi, astor, gast, grpc, sqlite, openssl, jsoncpp, re2
-, curl, snappy, flatbuffers, icu, double-conversion, libpng, libjpeg, giflib
-# Upsteam by default includes cuda support since tensorflow 1.15. We could do
-# that in nix as well. It would make some things easier and less confusing, but
-# it would also make the default tensorflow package unfree. See
-# https://groups.google.com/a/tensorflow.org/forum/#!topic/developers/iRCt5m4qUz0
-, cudaSupport ? false, nvidia_x11 ? null, cudatoolkit ? null, cudnn ? null, nccl ? null
-, mklSupport ? false, mkl ? null
-# XLA without CUDA is broken
-, xlaSupport ? cudaSupport
-# Default from ./configure script
-, cudaCapabilities ? [ "3.5" "5.2" ]
-, sse42Support ? stdenv.hostPlatform.sse4_2Support
-, avx2Support  ? stdenv.hostPlatform.avx2Support
-, fmaSupport   ? stdenv.hostPlatform.fmaSupport
-# Darwin deps
-, Foundation, Security
-}:
-
-assert cudaSupport -> nvidia_x11 != null
-                   && cudatoolkit != null
-                   && cudnn != null;
-
-# unsupported combination
-assert ! (stdenv.isDarwin && cudaSupport);
-
-assert mklSupport -> mkl != null;
-
-let
-  withTensorboard = pythonOlder "3.6";
-
-  cudatoolkit_joined = symlinkJoin {
-    name = "${cudatoolkit.name}-merged";
-    paths = [
-      cudatoolkit.lib
-      cudatoolkit.out
-      # for some reason some of the required libs are in the targets/x86_64-linux
-      # directory; not sure why but this works around it
-      "${cudatoolkit}/targets/${stdenv.system}"
-    ];
-  };
-
-  cudatoolkit_cc_joined = symlinkJoin {
-    name = "${cudatoolkit.cc.name}-merged";
-    paths = [
-      cudatoolkit.cc
-      binutils.bintools # for ar, dwp, nm, objcopy, objdump, strip
-    ];
-  };
-
-  # Needed for _some_ system libraries, grep INCLUDEDIR.
-  includes_joined = symlinkJoin {
-    name = "tensorflow-deps-merged";
-    paths = [
-      pkgs.protobuf
-      jsoncpp
-    ];
-  };
-
-  tfFeature = x: if x then "1" else "0";
-
-  version = "1.15.4";
-  variant = if cudaSupport then "-gpu" else "";
-  pname = "tensorflow${variant}";
-
-  pythonEnv = python.withPackages (_:
-    [ # python deps needed during wheel build time (not runtime, see the buildPythonPackage part for that)
-      numpy
-      keras-preprocessing
-      protobuf
-      wrapt
-      gast
-      astor
-      absl-py
-      termcolor
-      keras-applications
-      setuptools
-      wheel
-  ] ++ lib.optionals (!isPy3k)
-  [ future
-    functools32
-    mock
-  ]);
-
-  bazel-build = buildBazelPackage {
-    name = "${pname}-${version}";
-    bazel = bazel_0_26;
-
-    src = fetchFromGitHub {
-      owner = "tensorflow";
-      repo = "tensorflow";
-      rev = "v${version}";
-      sha256 = "0lg8ahyr2k7dmp0yfypk8ivl9a0xcg3j0f0dakmn5ljk8nsji0bj";
-    };
-
-    patches = [
-      # Work around https://github.com/tensorflow/tensorflow/issues/24752
-      ../no-saved-proto.patch
-      # Fixes for NixOS jsoncpp
-      ../system-jsoncpp.patch
-
-      # https://github.com/tensorflow/tensorflow/pull/29673
-      (fetchpatch {
-        name = "fix-compile-with-cuda-and-mpi.patch";
-        url = "https://github.com/tensorflow/tensorflow/pull/29673/commits/498e35a3bfe38dd75cf1416a1a23c07c3b59e6af.patch";
-        sha256 = "1m2qmwv1ysqa61z6255xggwbq6mnxbig749bdvrhnch4zydxb4di";
-      })
-      (fetchpatch {
-        name = "backport-pr-18950.patch";
-        url = "https://github.com/tensorflow/tensorflow/commit/73640aaec2ab0234d9fff138e3c9833695570c0a.patch";
-        sha256 = "1n9ypbrx36fc1kc9cz5b3p9qhg15xxhq4nz6ap3hwqba535nakfz";
-      })
-
-      (fetchpatch {
-        # be compatible with gast >0.2 instead of only gast 0.2.2
-        name = "gast-update.patch";
-        url = "https://github.com/tensorflow/tensorflow/commit/85751ad6c7f5fd12c6c79545d96896cba92fa8b4.patch";
-        sha256 = "077cpj0kzyqxzdya1dwh8df17zfzhqn7c685hx6iskvw2979zg2n";
-      })
-      ./lift-gast-restriction.patch
-
-      (fetchpatch {
-        # fix compilation with numpy >= 1.19
-        name = "add-const-overload.patch";
-        url = "https://github.com/tensorflow/tensorflow/commit/75ea0b31477d6ba9e990e296bbbd8ca4e7eebadf.patch";
-        sha256 = "1xp1icacig0xm0nmb05sbrf4nw4xbln9fhc308birrv8286zx7wv";
-      })
-
-      # cuda 10.2 does not have "-bin2c-path" option anymore
-      # https://github.com/tensorflow/tensorflow/issues/34429
-      ../cuda-10.2-no-bin2c-path.patch
-    ];
-
-    # On update, it can be useful to steal the changes from gentoo
-    # https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-libs/tensorflow
-
-    nativeBuildInputs = [
-      swig which pythonEnv
-    ] ++ lib.optional cudaSupport addOpenGLRunpath;
-
-    buildInputs = [
-      jemalloc
-      openmpi
-      glibcLocales
-      git
-
-      # libs taken from system through the TF_SYS_LIBS mechanism
-      # grpc
-      sqlite
-      openssl
-      jsoncpp
-      pkgs.protobuf
-      curl
-      snappy
-      flatbuffers
-      icu
-      double-conversion
-      libpng
-      libjpeg
-      giflib
-      re2
-      pkgs.lmdb
-    ] ++ lib.optionals cudaSupport [
-      cudatoolkit
-      cudnn
-      nvidia_x11
-    ] ++ lib.optionals mklSupport [
-      mkl
-    ] ++ lib.optionals stdenv.isDarwin [
-      Foundation
-      Security
-    ];
-
-    # arbitrarily set to the current latest bazel version, overly careful
-    TF_IGNORE_MAX_BAZEL_VERSION = true;
-
-    # Take as many libraries from the system as possible. Keep in sync with
-    # list of valid syslibs in
-    # https://github.com/tensorflow/tensorflow/blob/master/third_party/systemlibs/syslibs_configure.bzl
-    TF_SYSTEM_LIBS = lib.concatStringsSep "," [
-      "absl_py"
-      "astor_archive"
-      "boringssl"
-      # Not packaged in nixpkgs
-      # "com_github_googleapis_googleapis"
-      # "com_github_googlecloudplatform_google_cloud_cpp"
-      "com_google_protobuf"
-      "com_googlesource_code_re2"
-      "curl"
-      "cython"
-      "double_conversion"
-      "flatbuffers"
-      "gast_archive"
-      "gif_archive"
-      # Lots of errors, requires an older version
-      # "grpc"
-      "hwloc"
-      "icu"
-      "jpeg"
-      "jsoncpp_git"
-      "keras_applications_archive"
-      "lmdb"
-      "nasm"
-      # "nsync" # not packaged in nixpkgs
-      "opt_einsum_archive"
-      "org_sqlite"
-      "pasta"
-      "pcre"
-      "png_archive"
-      "six_archive"
-      "snappy"
-      "swig"
-      "termcolor_archive"
-      "wrapt"
-      "zlib_archive"
-    ];
-
-    INCLUDEDIR = "${includes_joined}/include";
-
-    PYTHON_BIN_PATH = pythonEnv.interpreter;
-
-    TF_NEED_GCP = true;
-    TF_NEED_HDFS = true;
-    TF_ENABLE_XLA = tfFeature xlaSupport;
-
-    CC_OPT_FLAGS = " ";
-
-    # https://github.com/tensorflow/tensorflow/issues/14454
-    TF_NEED_MPI = tfFeature cudaSupport;
-
-    TF_NEED_CUDA = tfFeature cudaSupport;
-    TF_CUDA_PATHS = lib.optionalString cudaSupport "${cudatoolkit_joined},${cudnn},${nccl}";
-    GCC_HOST_COMPILER_PREFIX = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin";
-    GCC_HOST_COMPILER_PATH = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin/gcc";
-    TF_CUDA_COMPUTE_CAPABILITIES = lib.concatStringsSep "," cudaCapabilities;
-
-    postPatch = ''
-      # https://github.com/tensorflow/tensorflow/issues/20919
-      sed -i '/androidndk/d' tensorflow/lite/kernels/internal/BUILD
-
-      # Tensorboard pulls in a bunch of dependencies, some of which may
-      # include security vulnerabilities. So we make it optional.
-      # https://github.com/tensorflow/tensorflow/issues/20280#issuecomment-400230560
-      sed -i '/tensorboard >=/d' tensorflow/tools/pip_package/setup.py
-
-      substituteInPlace tensorflow/tools/pip_package/setup.py \
-        --replace "numpy >= 1.16.0, < 1.19.0" "numpy >= 1.16.0"
-
-      # glibc 2.31+ does not have sys/sysctl.h
-      # see https://github.com/tensorflow/tensorflow/issues/45861
-      substituteInPlace third_party/hwloc/BUILD.bazel\
-        --replace "#define HAVE_SYS_SYSCTL_H 1" "#undef HAVE_SYS_SYSCTL_H"
-    '';
-
-    preConfigure = let
-      opt_flags = []
-        ++ lib.optionals sse42Support ["-msse4.2"]
-        ++ lib.optionals avx2Support ["-mavx2"]
-        ++ lib.optionals fmaSupport ["-mfma"];
-    in ''
-      patchShebangs configure
-
-      # dummy ldconfig
-      mkdir dummy-ldconfig
-      echo "#!${stdenv.shell}" > dummy-ldconfig/ldconfig
-      chmod +x dummy-ldconfig/ldconfig
-      export PATH="$PWD/dummy-ldconfig:$PATH"
-
-      export PYTHON_LIB_PATH="$NIX_BUILD_TOP/site-packages"
-      export CC_OPT_FLAGS="${lib.concatStringsSep " " opt_flags}"
-      mkdir -p "$PYTHON_LIB_PATH"
-
-      # To avoid mixing Python 2 and Python 3
-      unset PYTHONPATH
-    '';
-
-    configurePhase = ''
-      runHook preConfigure
-      ./configure
-      runHook postConfigure
-    '';
-
-    # FIXME: Tensorflow uses dlopen() for CUDA libraries.
-    NIX_LDFLAGS = lib.optionalString cudaSupport "-lcudart -lcublas -lcufft -lcurand -lcusolver -lcusparse -lcudnn";
-
-    hardeningDisable = [ "format" ];
-
-    bazelFlags = [
-      # temporary fixes to make the build work with bazel 0.27
-      "--incompatible_no_support_tools_in_action_inputs=false"
-    ];
-    bazelBuildFlags = [
-      "--config=opt" # optimize using the flags set in the configure phase
-    ]
-    ++ lib.optionals (mklSupport) [ "--config=mkl" ];
-
-    bazelTarget = "//tensorflow/tools/pip_package:build_pip_package //tensorflow/tools/lib_package:libtensorflow";
-
-    fetchAttrs = {
-      # So that checksums don't depend on these.
-      TF_SYSTEM_LIBS = null;
-
-      # cudaSupport causes fetch of ncclArchive, resulting in different hashes
-      sha256 = if cudaSupport then
-        "1bi6aydidgi943hiqj0d279jbz2g173hvafdqla1ifw2qdsm73pb"
-      else
-        "0l5510fr8n22c4hx9llr0vqqhx9wlgkyxl55fxbixhssd0ai05r4";
-    };
-
-    buildAttrs = {
-      outputs = [ "out" "python" ];
-
-      preBuild = ''
-        patchShebangs .
-      '';
-
-      installPhase = ''
-        mkdir -p "$out"
-        tar -xf bazel-bin/tensorflow/tools/lib_package/libtensorflow.tar.gz -C "$out"
-        # Write pkgconfig file.
-        mkdir "$out/lib/pkgconfig"
-        cat > "$out/lib/pkgconfig/tensorflow.pc" << EOF
-        Name: TensorFlow
-        Version: ${version}
-        Description: Library for computation using data flow graphs for scalable machine learning
-        Requires:
-        Libs: -L$out/lib -ltensorflow
-        Cflags: -I$out/include/tensorflow
-        EOF
-
-        # build the source code, then copy it to $python (build_pip_package
-        # actually builds a symlink farm so we must dereference them).
-        bazel-bin/tensorflow/tools/pip_package/build_pip_package --src "$PWD/dist"
-        cp -Lr "$PWD/dist" "$python"
-      '';
-
-      postFixup = lib.optionalString cudaSupport ''
-        find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
-          addOpenGLRunpath "$lib"
-        done
-      '';
-    };
-
-    meta = with stdenv.lib; {
-      description = "Computation using data flow graphs for scalable machine learning";
-      homepage = "http://tensorflow.org";
-      license = licenses.asl20;
-      maintainers = with maintainers; [ jyp abbradar ];
-      platforms = with platforms; linux ++ darwin;
-      # The py2 build fails due to some issue importing protobuf. Possibly related to the fix in
-      # https://github.com/akesandgren/easybuild-easyblocks/commit/1f2e517ddfd1b00a342c6abb55aef3fd93671a2b
-      broken = !(xlaSupport -> cudaSupport) || !isPy3k;
-    };
-  };
-
-in buildPythonPackage {
-  inherit version pname;
-  disabled = isPy27 || (pythonAtLeast "3.8");
-
-  src = bazel-build.python;
-
-  # Upstream has a pip hack that results in bin/tensorboard being in both tensorflow
-  # and the propagated input tensorflow-tensorboard, which causes environment collisions.
-  # Another possibility would be to have tensorboard only in the buildInputs
-  # https://github.com/tensorflow/tensorflow/blob/v1.7.1/tensorflow/tools/pip_package/setup.py#L79
-  postInstall = ''
-    rm $out/bin/tensorboard
-  '';
-
-  setupPyGlobalFlags = [ "--project_name ${pname}" ];
-
-  # tensorflow/tools/pip_package/setup.py
-  propagatedBuildInputs = [
-    absl-py
-    astor
-    gast
-    google-pasta
-    keras-applications
-    keras-preprocessing
-    numpy
-    six
-    protobuf
-    tensorflow-estimator_1
-    termcolor
-    wrapt
-    grpcio
-    opt-einsum
-  ] ++ lib.optionals (!isPy3k) [
-    mock
-    future
-    functools32
-  ] ++ lib.optionals (pythonOlder "3.4") [
-    backports_weakref enum34
-  ] ++ lib.optionals withTensorboard [
-    tensorflow-tensorboard_1
-  ];
-
-  nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath;
-
-  postFixup = lib.optionalString cudaSupport ''
-    find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
-      addOpenGLRunpath "$lib"
-    done
-  '';
-
-  # Actual tests are slow and impure.
-  # TODO try to run them anyway
-  # TODO better test (files in tensorflow/tools/ci_build/builds/*test)
-  checkPhase = ''
-    ${python.interpreter} <<EOF
-    # A simple "Hello world"
-    import tensorflow as tf
-    hello = tf.constant("Hello, world!")
-    sess = tf.Session()
-    sess.run(hello)
-
-    # Fit a simple model to random data
-    import numpy as np
-    np.random.seed(0)
-    tf.random.set_random_seed(0)
-    model = tf.keras.models.Sequential([
-        tf.keras.layers.Dense(1, activation="linear")
-    ])
-    model.compile(optimizer="sgd", loss="mse")
-
-    x = np.random.uniform(size=(1,1))
-    y = np.random.uniform(size=(1,))
-    model.fit(x, y, epochs=1)
-
-    # regression test for #77626
-    from tensorflow.contrib import tensor_forest
-    EOF
-  '';
-
-  passthru = {
-    deps = bazel-build.deps;
-    libtensorflow = bazel-build.out;
-  };
-
-  meta = bazel-build.meta // {
-    broken = gast.version != "0.3.2";
-  };
-}
diff --git a/pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch b/pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch
deleted file mode 100644
index 30861d92341..00000000000
--- a/pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/tensorflow/tools/pip_package/setup.py b/tensorflow/tools/pip_package/setup.py
-index 992f2eae22..d9386f9b13 100644
---- a/tensorflow/tools/pip_package/setup.py
-+++ b/tensorflow/tools/pip_package/setup.py
-@@ -54,7 +54,7 @@ REQUIRED_PACKAGES = [
-     'enum34 >= 1.1.6;python_version<"3.4"',
-     # functools comes with python3, need to install the backport for python2
-     'functools32 >= 3.2.3;python_version<"3"',
--    'gast == 0.2.2',
-+    'gast >= 0.2.2',
-     'google_pasta >= 0.1.6',
-     'keras_applications >= 1.0.8',
-     'keras_preprocessing >= 1.0.5',
diff --git a/pkgs/development/python-modules/tensorflow/1/prefetcher.sh b/pkgs/development/python-modules/tensorflow/1/prefetcher.sh
deleted file mode 100755
index d590fb0f173..00000000000
--- a/pkgs/development/python-modules/tensorflow/1/prefetcher.sh
+++ /dev/null
@@ -1,33 +0,0 @@
-#!/usr/bin/env bash
-
-version=1.14.0
-hashfile=binary-hashes.nix
-rm -f $hashfile
-echo "{" >> $hashfile
-echo "version = \"$version\";" >> $hashfile
-for sys in "linux" "mac"; do
-    for tfpref in "cpu/tensorflow" "gpu/tensorflow_gpu"; do
-        for pykind in "py2-none-any" "py3-none-any" "cp27-none-linux_x86_64" "cp35-cp35m-linux_x86_64" "cp36-cp36m-linux_x86_64" "cp37-cp37m-linux_x86_64"; do
-            if [ $sys == "mac" ]; then
-               [[ $pykind =~ py.* ]] && [[ $tfpref =~ cpu.* ]]
-               result=$?
-               pyver=${pykind:2:1}
-               flavour=cpu
-            else
-               [[ $pykind =~ .*linux.* ]]
-               result=$?
-               pyver=${pykind:2:2}
-               flavour=${tfpref:0:3}
-            fi
-            if [ $result == 0 ]; then
-                url=https://storage.googleapis.com/tensorflow/$sys/$tfpref-$version-$pykind.whl
-                hash=$(nix-prefetch-url $url)
-                echo "${sys}_py_${pyver}_${flavour} = {" >> $hashfile
-                echo "  url = \"$url\";" >> $hashfile
-                echo "  sha256 = \"$hash\";" >> $hashfile
-                echo "};" >> $hashfile
-            fi
-        done
-    done
-done
-echo "}" >> $hashfile
diff --git a/pkgs/development/python-modules/tensorflow/2/bin.nix b/pkgs/development/python-modules/tensorflow/bin.nix
similarity index 100%
rename from pkgs/development/python-modules/tensorflow/2/bin.nix
rename to pkgs/development/python-modules/tensorflow/bin.nix
diff --git a/pkgs/development/python-modules/tensorflow/2/binary-hashes.nix b/pkgs/development/python-modules/tensorflow/binary-hashes.nix
similarity index 100%
rename from pkgs/development/python-modules/tensorflow/2/binary-hashes.nix
rename to pkgs/development/python-modules/tensorflow/binary-hashes.nix
diff --git a/pkgs/development/python-modules/tensorflow/cuda-10.2-no-bin2c-path.patch b/pkgs/development/python-modules/tensorflow/cuda-10.2-no-bin2c-path.patch
deleted file mode 100644
index 25f1ba7a551..00000000000
--- a/pkgs/development/python-modules/tensorflow/cuda-10.2-no-bin2c-path.patch
+++ /dev/null
@@ -1,10 +0,0 @@
---- a/third_party/nccl/build_defs.bzl.tpl
-+++ b/third_party/nccl/build_defs.bzl.tpl
-@@ -113,7 +113,6 @@ def _device_link_impl(ctx):
-             "--cmdline=--compile-only",
-             "--link",
-             "--compress-all",
--            "--bin2c-path=%s" % bin2c.dirname,
-             "--create=%s" % tmp_fatbin.path,
-             "--embedded-fatbin=%s" % fatbin_h.path,
-         ] + images,
diff --git a/pkgs/development/python-modules/tensorflow/2/default.nix b/pkgs/development/python-modules/tensorflow/default.nix
similarity index 99%
rename from pkgs/development/python-modules/tensorflow/2/default.nix
rename to pkgs/development/python-modules/tensorflow/default.nix
index 68c983c0594..cdf80336458 100644
--- a/pkgs/development/python-modules/tensorflow/2/default.nix
+++ b/pkgs/development/python-modules/tensorflow/default.nix
@@ -108,7 +108,7 @@ let
 
     patches = [
       # Fixes for NixOS jsoncpp
-      ../system-jsoncpp.patch
+      ./system-jsoncpp.patch
 
       ./relax-dependencies.patch
 
diff --git a/pkgs/development/python-modules/tensorflow/no-saved-proto.patch b/pkgs/development/python-modules/tensorflow/no-saved-proto.patch
deleted file mode 100644
index ead112f8ddd..00000000000
--- a/pkgs/development/python-modules/tensorflow/no-saved-proto.patch
+++ /dev/null
@@ -1,14 +0,0 @@
-diff --git a/tensorflow/cc/saved_model/BUILD b/tensorflow/cc/saved_model/BUILD
-index 8626ed0087..27deb34387 100644
---- a/tensorflow/cc/saved_model/BUILD
-+++ b/tensorflow/cc/saved_model/BUILD
-@@ -49,9 +49,6 @@ cc_library(
-         # tf_lib depending on the build platform.
-         "//tensorflow/core:lib",
-         "//tensorflow/core:protos_all_cc",
--    ]) + if_mobile([
--        # Mobile-friendly SavedModel proto. See go/portable-proto for more info.
--        "//tensorflow/core:saved_model_portable_proto",
-     ]) + if_android([
-         "//tensorflow/core:android_tensorflow_lib",
-     ]) + if_ios([
diff --git a/pkgs/development/python-modules/tensorflow/2/prefetcher.sh b/pkgs/development/python-modules/tensorflow/prefetcher.sh
similarity index 100%
rename from pkgs/development/python-modules/tensorflow/2/prefetcher.sh
rename to pkgs/development/python-modules/tensorflow/prefetcher.sh
diff --git a/pkgs/development/python-modules/tensorflow/2/relax-dependencies.patch b/pkgs/development/python-modules/tensorflow/relax-dependencies.patch
similarity index 100%
rename from pkgs/development/python-modules/tensorflow/2/relax-dependencies.patch
rename to pkgs/development/python-modules/tensorflow/relax-dependencies.patch
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 70b2cbdf0e1..470a23c0279 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -7352,34 +7352,16 @@ in {
 
   tensorboardx = callPackage ../development/python-modules/tensorboardx { };
 
-  tensorflow-bin_1 = callPackage ../development/python-modules/tensorflow/1/bin.nix {
+  tensorflow-bin_2 = callPackage ../development/python-modules/tensorflow/bin.nix {
     cudaSupport = pkgs.config.cudaSupport or false;
     inherit (pkgs.linuxPackages) nvidia_x11;
     cudatoolkit = pkgs.cudatoolkit_10;
     cudnn = pkgs.cudnn_cudatoolkit_10;
   };
 
-  tensorflow-bin_2 = callPackage ../development/python-modules/tensorflow/2/bin.nix {
-    cudaSupport = pkgs.config.cudaSupport or false;
-    inherit (pkgs.linuxPackages) nvidia_x11;
-    cudatoolkit = pkgs.cudatoolkit_10;
-    cudnn = pkgs.cudnn_cudatoolkit_10;
-  };
+  tensorflow-bin = self.tensorflow-bin_2;
 
-  tensorflow-bin = self.tensorflow-bin_1;
-
-  tensorflow-build_1 = callPackage ../development/python-modules/tensorflow/1 {
-    cudaSupport = pkgs.config.cudaSupport or false;
-    inherit (pkgs.linuxPackages) nvidia_x11;
-    cudatoolkit = pkgs.cudatoolkit_10;
-    cudnn = pkgs.cudnn_cudatoolkit_10;
-    nccl = pkgs.nccl_cudatoolkit_10;
-    openssl = pkgs.openssl_1_1;
-    inherit (pkgs.darwin.apple_sdk.frameworks) Foundation Security;
-    inherit (pkgs) flatbuffers;
-  };
-
-  tensorflow-build_2 = callPackage ../development/python-modules/tensorflow/2 {
+  tensorflow-build_2 = callPackage ../development/python-modules/tensorflow {
     cudaSupport = pkgs.config.cudaSupport or false;
     cudatoolkit = pkgs.cudatoolkit_11;
     cudnn = pkgs.cudnn_cudatoolkit_11;
@@ -7389,25 +7371,20 @@ in {
     inherit (pkgs) flatbuffers;
   };
 
-  tensorflow-build = self.tensorflow-build_1;
+  tensorflow-build = self.tensorflow-build_2;
 
-  tensorflow-estimator_1 = callPackage ../development/python-modules/tensorflow-estimator/1 { };
+  tensorflow-estimator_2 = callPackage ../development/python-modules/tensorflow-estimator { };
 
-  tensorflow-estimator_2 = callPackage ../development/python-modules/tensorflow-estimator/2 { };
-
-  tensorflow-estimator = self.tensorflow-estimator_1;
+  tensorflow-estimator = self.tensorflow-estimator_2;
 
   tensorflow-probability = callPackage ../development/python-modules/tensorflow-probability { };
 
-  tensorflow = self.tensorflow_1;
-  tensorflow_1 = self.tensorflow-build_1;
+  tensorflow = self.tensorflow_2;
   tensorflow_2 = self.tensorflow-build_2;
 
-  tensorflow-tensorboard_1 = callPackage ../development/python-modules/tensorflow-tensorboard/1 { };
+  tensorflow-tensorboard_2 = callPackage ../development/python-modules/tensorflow-tensorboard { };
 
-  tensorflow-tensorboard_2 = callPackage ../development/python-modules/tensorflow-tensorboard/2 { };
-
-  tensorflow-tensorboard = self.tensorflow-tensorboard_1;
+  tensorflow-tensorboard = self.tensorflow-tensorboard_2;
 
   tensorflowWithCuda = self.tensorflow.override { cudaSupport = true; };
 

From 370ffaaca722b5f9124c0eb38b8e8f4a15b49c9c Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= <joerg@thalheim.io>
Date: Thu, 7 Jan 2021 15:34:10 +0100
Subject: [PATCH 35/45] tensorflow: 2.3.1 -> 2.3.2

---
 .../development/python-modules/tensorflow/default.nix | 11 +++++++----
 pkgs/top-level/python-packages.nix                    |  8 ++++----
 2 files changed, 11 insertions(+), 8 deletions(-)

diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/default.nix
index cdf80336458..8d859920c79 100644
--- a/pkgs/development/python-modules/tensorflow/default.nix
+++ b/pkgs/development/python-modules/tensorflow/default.nix
@@ -72,7 +72,7 @@ let
 
   tfFeature = x: if x then "1" else "0";
 
-  version = "2.3.1";
+  version = "2.3.2";
   variant = if cudaSupport then "-gpu" else "";
   pname = "tensorflow${variant}";
 
@@ -103,7 +103,7 @@ let
       owner = "tensorflow";
       repo = "tensorflow";
       rev = "v${version}";
-      sha256 = "1lvmrqfnwzh24fl5rdkksiqfv2bn0ld5gvzq1z57rphfkf0zg996";
+      sha256 = "sha256-ncwIkqLDqrB33pB9/FTlBklsIJUEvnDUmyAeUfufCFs=";
     };
 
     patches = [
@@ -236,6 +236,9 @@ let
       rm -f .bazelversion
     '';
 
+    # https://github.com/tensorflow/tensorflow/pull/39470
+    NIX_CFLAGS_COMPILE = [ "-Wno-stringop-truncation" ];
+
     preConfigure = let
       opt_flags = []
         ++ lib.optionals sse42Support ["-msse4.2"]
@@ -281,9 +284,9 @@ let
 
       # cudaSupport causes fetch of ncclArchive, resulting in different hashes
       sha256 = if cudaSupport then
-        "11blnw3ghp1kdi9hh9pdqa4qni9ysc3nk9iqqk9bg4dlr9zl1yld"
+        "sha256-lEdPA9vhYO6vd5FgPMbFp2PkRvDBurPidYsxtJLXcbQ="
       else
-        "1kkghhwhl8frs68kv28r408lps7mpgq1xvq6hc3k0j35asv1g2kc";
+        "sha256-ZEY/bWo5M3Juw1x3CwhXYXZHD4q5LzWDlhgXnh4P95U=";
     };
 
     buildAttrs = {
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 470a23c0279..a1b7f33c626 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -7355,16 +7355,16 @@ in {
   tensorflow-bin_2 = callPackage ../development/python-modules/tensorflow/bin.nix {
     cudaSupport = pkgs.config.cudaSupport or false;
     inherit (pkgs.linuxPackages) nvidia_x11;
-    cudatoolkit = pkgs.cudatoolkit_10;
-    cudnn = pkgs.cudnn_cudatoolkit_10;
+    cudatoolkit = pkgs.cudatoolkit_11_0;
+    cudnn = pkgs.cudnn_cudatoolkit_11_0;
   };
 
   tensorflow-bin = self.tensorflow-bin_2;
 
   tensorflow-build_2 = callPackage ../development/python-modules/tensorflow {
     cudaSupport = pkgs.config.cudaSupport or false;
-    cudatoolkit = pkgs.cudatoolkit_11;
-    cudnn = pkgs.cudnn_cudatoolkit_11;
+    cudatoolkit = pkgs.cudatoolkit_11_0;
+    cudnn = pkgs.cudnn_cudatoolkit_11_0;
     nccl = pkgs.nccl_cudatoolkit_11;
     openssl = pkgs.openssl_1_1;
     inherit (pkgs.darwin.apple_sdk.frameworks) Foundation Security;

From ddf11daac70f9dd5b0e5d21f8566275d1c84f614 Mon Sep 17 00:00:00 2001
From: Kira Bruneau <kira.bruneau@gmail.com>
Date: Tue, 5 Jan 2021 21:25:48 -0500
Subject: [PATCH 36/45] nixos/pipewire: improve assertion messages

---
 nixos/modules/services/desktops/pipewire.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/nixos/modules/services/desktops/pipewire.nix b/nixos/modules/services/desktops/pipewire.nix
index 0ef988d9e69..134becf6b0c 100644
--- a/nixos/modules/services/desktops/pipewire.nix
+++ b/nixos/modules/services/desktops/pipewire.nix
@@ -93,11 +93,11 @@ in {
     assertions = [
       {
         assertion = cfg.pulse.enable -> !config.hardware.pulseaudio.enable;
-        message = "PipeWire based PulseAudio server emulation replaces PulseAudio";
+        message = "PipeWire based PulseAudio server emulation replaces PulseAudio. This option requires `hardware.pulseaudio.enable` to be set to false";
       }
       {
         assertion = cfg.jack.enable -> !config.services.jack.jackd.enable;
-        message = "PipeWire based JACK emulation doesn't use the JACK service";
+        message = "PipeWire based JACK emulation doesn't use the JACK service. This option requires `services.jack.jackd.enable` to be set to false";
       }
     ];
 

From 8deca0d420644014b03c40d862bbe73096621174 Mon Sep 17 00:00:00 2001
From: MetaDark <kira.bruneau@gmail.com>
Date: Fri, 26 Jun 2020 22:24:35 -0400
Subject: [PATCH 37/45] zynaddsubfx: use zyn-fusion as default gui module

- Added `guiModule` option that accepts "fltk", "ntk", "zest", or "off"

- Split FLTK dependencies from NTK dependencies

- Added support for building the FLTK gui

- Added support for building the Zyn-Fusion (zest) gui

- Added new derivation for the Zest UI framework (local to zynaddsubfx)
  It's not yet designed to be used outside of zynaddsubfx, but it
  may be in the future

- Added flags for all optional features

- Added & disabled `dssiSupport` by default

- Disabled `lashSupport` by default
  Slows down startup looking for LASH server if not running

- Added & enabled `portaudioSupport` by default
  Cross platform audio library that uses ALSA/JACK on Linux.
  Supports multiple audio streams without needing JACK.

- Enabled tests

- Removes nico202 as maintainer, as requested in code review
---
 .../audio/zynaddsubfx/default.nix             | 117 +++++++++++++++---
 .../audio/zynaddsubfx/mruby-zest/default.nix  | 109 ++++++++++++++++
 .../mruby-zest/force-gcc-as-linker.patch      |  13 ++
 .../zynaddsubfx/mruby-zest/system-libuv.patch | 113 +++++++++++++++++
 pkgs/top-level/all-packages.nix               |  14 ++-
 5 files changed, 350 insertions(+), 16 deletions(-)
 create mode 100644 pkgs/applications/audio/zynaddsubfx/mruby-zest/default.nix
 create mode 100644 pkgs/applications/audio/zynaddsubfx/mruby-zest/force-gcc-as-linker.patch
 create mode 100644 pkgs/applications/audio/zynaddsubfx/mruby-zest/system-libuv.patch

diff --git a/pkgs/applications/audio/zynaddsubfx/default.nix b/pkgs/applications/audio/zynaddsubfx/default.nix
index 9a432f73d3f..3d5f392205f 100644
--- a/pkgs/applications/audio/zynaddsubfx/default.nix
+++ b/pkgs/applications/audio/zynaddsubfx/default.nix
@@ -1,30 +1,117 @@
-{ stdenv, fetchurl, alsaLib, cairo, cmake, libjack2, fftw, fltk13, lash,  libjpeg
-, libXpm, minixml, ntk, pkgconfig, zlib, liblo
+{ lib
+, stdenv
+, fetchFromGitHub
+, callPackage
+
+  # Required build tools
+, cmake
+, makeWrapper
+, pkg-config
+
+  # Required dependencies
+, fftw
+, liblo
+, minixml
+, zlib
+
+  # Optional dependencies
+, alsaSupport ? true
+, alsaLib
+, dssiSupport ? false
+, dssi
+, ladspaH
+, jackSupport ? true
+, libjack2
+, lashSupport ? false
+, lash
+, ossSupport ? true
+, portaudioSupport ? true
+, portaudio
+
+  # Optional GUI dependencies
+, guiModule ? "off"
+, cairo
+, fltk13
+, libGL
+, libjpeg
+, libX11
+, libXpm
+, ntk
+
+  # Test dependencies
+, cxxtest
 }:
 
-stdenv.mkDerivation  rec {
+assert builtins.any (g: guiModule == g) [ "fltk" "ntk" "zest" "off" ];
+
+let
+  guiName = {
+    "fltk" = "FLTK";
+    "ntk" = "NTK";
+    "zest" = "Zyn-Fusion";
+  }.${guiModule};
+  mruby-zest = callPackage ./mruby-zest { };
+in stdenv.mkDerivation rec {
   pname = "zynaddsubfx";
   version = "3.0.5";
 
-  src = fetchurl {
-    url = "mirror://sourceforge/zynaddsubfx/zynaddsubfx-${version}.tar.bz2";
-    sha256 = "0qwzg14h043rmyf9jqdylxhyfy4sl0vsr0gjql51wjhid0i34ivl";
+  src = fetchFromGitHub {
+    owner = pname;
+    repo = pname;
+    rev = version;
+    sha256 = "1vh1gszgjxwn8m32rk5222z1j2cnjax0bqpag7b47v6i36p2q4x8";
+    fetchSubmodules = true;
   };
 
-  buildInputs = [ alsaLib cairo libjack2 fftw fltk13 lash libjpeg libXpm minixml ntk zlib liblo ];
-  nativeBuildInputs = [ cmake pkgconfig ];
-
-  patchPhase = ''
+  postPatch = ''
     substituteInPlace src/Misc/Config.cpp --replace /usr $out
   '';
 
-  hardeningDisable = [ "format" ];
+  nativeBuildInputs = [ cmake makeWrapper pkg-config ];
+
+  buildInputs = [ fftw liblo minixml zlib ]
+    ++ lib.optionals alsaSupport [ alsaLib ]
+    ++ lib.optionals dssiSupport [ dssi ladspaH ]
+    ++ lib.optionals jackSupport [ libjack2 ]
+    ++ lib.optionals lashSupport [ lash ]
+    ++ lib.optionals portaudioSupport [ portaudio ]
+    ++ lib.optionals (guiModule == "fltk") [ fltk13 libjpeg libXpm ]
+    ++ lib.optionals (guiModule == "ntk") [ ntk cairo libXpm ]
+    ++ lib.optionals (guiModule == "zest") [ libGL libX11 ];
+
+  cmakeFlags = [ "-DGuiModule=${guiModule}" ]
+    # OSS library is included in glibc.
+    # Must explicitly disable if support is not wanted.
+    ++ lib.optional (!ossSupport) "-DOssEnable=OFF"
+    # Find FLTK without requiring an OpenGL library in buildInputs
+    ++ lib.optional (guiModule == "fltk") "-DFLTK_SKIP_OPENGL=ON";
+
+  doCheck = true;
+  checkInputs = [ cxxtest ];
+
+  # When building with zest GUI, patch plugins
+  # and standalone executable to properly locate zest
+  postFixup = lib.optional (guiModule == "zest") ''
+    patchelf --set-rpath "${mruby-zest}:$(patchelf --print-rpath "$out/lib/lv2/ZynAddSubFX.lv2/ZynAddSubFX_ui.so")" \
+      "$out/lib/lv2/ZynAddSubFX.lv2/ZynAddSubFX_ui.so"
+
+    patchelf --set-rpath "${mruby-zest}:$(patchelf --print-rpath "$out/lib/vst/ZynAddSubFX.so")" \
+      "$out/lib/vst/ZynAddSubFX.so"
+
+    wrapProgram "$out/bin/zynaddsubfx" \
+      --prefix PATH : ${mruby-zest} \
+      --prefix LD_LIBRARY_PATH : ${mruby-zest}
+  '';
+
+  meta = with lib; {
+    description = "High quality software synthesizer (${guiName} GUI)";
+    homepage =
+      if guiModule == "zest"
+      then "https://zynaddsubfx.sourceforge.io/zyn-fusion.html"
+      else "https://zynaddsubfx.sourceforge.io";
 
-  meta = with stdenv.lib; {
-    description = "High quality software synthesizer";
-    homepage = "http://zynaddsubfx.sourceforge.net";
     license = licenses.gpl2;
+    maintainers = with maintainers; [ goibhniu metadark ];
     platforms = platforms.linux;
-    maintainers = [ maintainers.goibhniu maintainers.nico202 ];
   };
 }
diff --git a/pkgs/applications/audio/zynaddsubfx/mruby-zest/default.nix b/pkgs/applications/audio/zynaddsubfx/mruby-zest/default.nix
new file mode 100644
index 00000000000..0f00e6244d1
--- /dev/null
+++ b/pkgs/applications/audio/zynaddsubfx/mruby-zest/default.nix
@@ -0,0 +1,109 @@
+{ stdenv
+, fetchFromGitHub
+, bison
+, git
+, python2
+, rake
+, ruby
+, libGL
+, libuv
+, libX11
+}:
+
+let
+  mgem-list = fetchFromGitHub {
+    owner = "mruby";
+    repo = "mgem-list";
+    rev = "2033837203c8a141b1f9d23bb781fe0cbaefbd24";
+    sha256 = "0igf2nsx5i6g0yf7sjxxkngyriv213d0sjs3yidrflrabiywpxmm";
+  };
+
+  mruby-dir = fetchFromGitHub {
+    owner = "iij";
+    repo = "mruby-dir";
+    rev = "89dceefa1250fb1ae868d4cb52498e9e24293cd1";
+    sha256 = "0zrhiy9wmwmc9ls62iyb2z86j2ijqfn7rn4xfmrbrfxygczarsm9";
+  };
+
+  mruby-errno = fetchFromGitHub {
+    owner = "iij";
+    repo = "mruby-errno";
+    rev = "b4415207ff6ea62360619c89a1cff83259dc4db0";
+    sha256 = "12djcwjjw0fygai5kssxbfs3pzh3cpnq07h9m2h5b51jziw380xj";
+  };
+
+  mruby-file-stat = fetchFromGitHub {
+    owner = "ksss";
+    repo = "mruby-file-stat";
+    rev = "aa474589f065c71d9e39ab8ba976f3bea6f9aac2";
+    sha256 = "1clarmr67z133ivkbwla1a42wcjgj638j9w0mlv5n21mhim9rid5";
+  };
+
+  mruby-process = fetchFromGitHub {
+    owner = "iij";
+    repo = "mruby-process";
+    rev = "fe171fbe2a6cc3c2cf7d713641bddde71024f7c8";
+    sha256 = "00yrzc371f90gl5m1gbkw0qq8c394bpifssjr8p1wh5fmzhxqyml";
+  };
+
+  mruby-pack = fetchFromGitHub {
+    owner = "iij";
+    repo = "mruby-pack";
+    rev = "383a9c79e191d524a9a2b4107cc5043ecbf6190b";
+    sha256 = "003glxgxifk4ixl12sy4gn9bhwvgb79b4wga549ic79isgv81w2d";
+  };
+in
+stdenv.mkDerivation rec {
+  pname = "mruby-zest";
+  version = "3.0.5";
+
+  src = fetchFromGitHub {
+    owner = pname;
+    repo = "${pname}-build";
+    rev = version;
+    sha256 = "0fxljrgamgz2rm85mclixs00b0f2yf109jc369039n1vf0l5m57d";
+    fetchSubmodules = true;
+  };
+
+  nativeBuildInputs = [ bison git python2 rake ruby ];
+  buildInputs = [ libGL libuv libX11 ];
+
+  patches = [
+    ./force-gcc-as-linker.patch
+    ./system-libuv.patch
+  ];
+
+  # Add missing dependencies of deps/mruby-dir-glob/mrbgem.rake
+  # Should be fixed in next release, see bcadb0a5490bd6d599f1a0e66ce09b46363c9dae
+  postPatch = ''
+    mkdir -p mruby/build/mrbgems
+    ln -s ${mgem-list} mruby/build/mrbgems/mgem-list
+    ln -s ${mruby-dir} mruby/build/mrbgems/mruby-dir
+    ln -s ${mruby-errno} mruby/build/mrbgems/mruby-errno
+    ln -s ${mruby-file-stat} mruby/build/mrbgems/mruby-file-stat
+    ln -s ${mruby-process} mruby/build/mrbgems/mruby-process
+    ln -s ${mruby-pack} mruby/build/mrbgems/mruby-pack
+  '';
+
+  installTargets = [ "pack" ];
+
+  postInstall = ''
+    ln -s "$out/zest" "$out/zyn-fusion"
+    cp -a package/{font,libzest.so,schema,zest} "$out"
+
+    # mruby-widget-lib/src/api.c requires MainWindow.qml as part of a
+    # sanity check, even though qml files are compiled into the binary
+    # https://github.com/mruby-zest/mruby-zest-build/tree/3.0.5/src/mruby-widget-lib/src/api.c#L99-L116
+    # https://github.com/mruby-zest/mruby-zest-build/tree/3.0.5/linux-pack.sh#L17-L18
+    mkdir -p "$out/qml"
+    touch "$out/qml/MainWindow.qml"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "The Zest Framework used in ZynAddSubFX's UI";
+    homepage = "https://github.com/mruby-zest";
+    license = licenses.lgpl21;
+    maintainers = with maintainers; [ metadark ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/applications/audio/zynaddsubfx/mruby-zest/force-gcc-as-linker.patch b/pkgs/applications/audio/zynaddsubfx/mruby-zest/force-gcc-as-linker.patch
new file mode 100644
index 00000000000..c521d240774
--- /dev/null
+++ b/pkgs/applications/audio/zynaddsubfx/mruby-zest/force-gcc-as-linker.patch
@@ -0,0 +1,13 @@
+diff --git a/mruby/tasks/toolchains/gcc.rake b/mruby/tasks/toolchains/gcc.rake
+index f370c0ab..e5ab9f60 100644
+--- a/mruby/tasks/toolchains/gcc.rake
++++ b/mruby/tasks/toolchains/gcc.rake
+@@ -22,7 +22,7 @@ MRuby::Toolchain.new(:gcc) do |conf, _params|
+   end
+ 
+   conf.linker do |linker|
+-    linker.command = ENV['LD'] || 'gcc'
++    linker.command = 'gcc'
+     linker.flags = [ENV['LDFLAGS'] || %w()]
+     linker.libraries = %w(m)
+     linker.library_paths = []
diff --git a/pkgs/applications/audio/zynaddsubfx/mruby-zest/system-libuv.patch b/pkgs/applications/audio/zynaddsubfx/mruby-zest/system-libuv.patch
new file mode 100644
index 00000000000..b7050abc123
--- /dev/null
+++ b/pkgs/applications/audio/zynaddsubfx/mruby-zest/system-libuv.patch
@@ -0,0 +1,113 @@
+diff --git a/Makefile b/Makefile
+index f3e3be2..2398852 100644
+--- a/Makefile
++++ b/Makefile
+@@ -1,8 +1,3 @@
+-UV_DIR    = libuv-v1.9.1
+-UV_FILE   = $(UV_DIR).tar.gz
+-UV_URL    = http://dist.libuv.org/dist/v1.9.1/$(UV_FILE)
+-	 
+-
+ all:
+ 	ruby ./rebuild-fcache.rb
+ 	cd deps/nanovg/src   && $(CC) nanovg.c -c -fPIC
+@@ -10,12 +5,12 @@ all:
+ #	cd deps/pugl         && python2 ./waf configure --no-cairo --static
+ 	cd deps/pugl         && python2 ./waf configure --no-cairo --static --debug
+ 	cd deps/pugl         && python2 ./waf
+-	cd src/osc-bridge    && CFLAGS="-I ../../deps/$(UV_DIR)/include " make lib
++	cd src/osc-bridge    && make lib
+ 	cd mruby             && MRUBY_CONFIG=../build_config.rb rake
+ 	$(CC) -shared -o libzest.so `find mruby/build/host -type f | grep -e "\.o$$" | grep -v bin` ./deps/libnanovg.a \
+ 		./deps/libnanovg.a \
+ 		src/osc-bridge/libosc-bridge.a \
+-		./deps/$(UV_DIR)/.libs/libuv.a  -lm -lX11 -lGL -lpthread
++		-luv -lm -lX11 -lGL -lpthread
+ 	$(CC) test-libversion.c deps/pugl/build/libpugl-0.a -ldl -o zest -lX11 -lGL -lpthread -I deps/pugl -std=gnu99
+ 
+ osx:
+@@ -25,12 +20,12 @@ osx:
+ 	cd deps/pugl         && python2 ./waf configure --no-cairo --static
+ #	cd deps/pugl         && python2 ./waf configure --no-cairo --static --debug
+ 	cd deps/pugl         && python2 ./waf
+-	cd src/osc-bridge    && CFLAGS="-I ../../deps/$(UV_DIR)/include " make lib
++	cd src/osc-bridge    && make lib
+ 	cd mruby             && MRUBY_CONFIG=../build_config.rb rake
+ 	$(CC) -shared -o libzest.so `find mruby/build/host -type f | grep -e "\.o$$" | grep -v bin` ./deps/libnanovg.a \
+ 		./deps/libnanovg.a \
+ 		src/osc-bridge/libosc-bridge.a \
+-		./deps/$(UV_DIR)/.libs/libuv.a  -lm -framework OpenGL -lpthread
++		-luv -lm -framework OpenGL -lpthread
+ 	$(CC) test-libversion.c deps/pugl/build/libpugl-0.a -ldl -o zest -framework OpenGL -framework AppKit -lpthread -I deps/pugl -std=gnu99
+ 
+ windows:
+@@ -38,38 +33,14 @@ windows:
+ 	$(AR) rc deps/libnanovg.a deps/nanovg/src/*.o
+ 	cd deps/pugl         && CFLAGS="-mstackrealign" python2 ./waf configure --no-cairo --static --target=win32
+ 	cd deps/pugl         && python2 ./waf
+-	cd src/osc-bridge    && CFLAGS="-mstackrealign -I ../../deps/$(UV_DIR)/include " make lib
++	cd src/osc-bridge    && CFLAGS="-mstackrealign" make lib
+ 	cd mruby             && WINDOWS=1 MRUBY_CONFIG=../build_config.rb rake
+ 	$(CC) -mstackrealign -shared -o libzest.dll -static-libgcc `find mruby/build/w64 -type f | grep -e "\.o$$" | grep -v bin` \
+         ./deps/libnanovg.a \
+         src/osc-bridge/libosc-bridge.a \
+-        ./deps/libuv-win.a \
+-        -lm -lpthread -lws2_32 -lkernel32 -lpsapi -luserenv -liphlpapi -lglu32 -lgdi32 -lopengl32
++        -luv -lm -lpthread -lws2_32 -lkernel32 -lpsapi -luserenv -liphlpapi -lglu32 -lgdi32 -lopengl32
+ 	$(CC) -mstackrealign -DWIN32 test-libversion.c deps/pugl/build/libpugl-0.a -o zest.exe -lpthread -I deps/pugl -std=c99 -lws2_32 -lkernel32 -lpsapi -luserenv -liphlpapi -lglu32 -lgdi32 -lopengl32
+ 
+-
+-builddep: deps/libuv.a
+-deps/libuv.a:
+-	cd deps/$(UV_DIR)    && ./autogen.sh
+-	cd deps/$(UV_DIR)    && CFLAGS=-fPIC ./configure
+-	cd deps/$(UV_DIR)    && CFLAGS=-fPIC make
+-	cp deps/$(UV_DIR)/.libs/libuv.a deps/
+-
+-builddepwin: deps/libuv-win.a
+-deps/libuv-win.a:
+-	cd deps/$(UV_DIR)   && ./autogen.sh
+-	cd deps/$(UV_DIR)   && CFLAGS="-mstackrealign" ./configure  --host=x86_64-w64-mingw32
+-	cd deps/$(UV_DIR)   && LD=x86_64-w64-mingw32-gcc make
+-	cp deps/$(UV_DIR)/.libs/libuv.a deps/libuv-win.a
+-
+-deps/$(UV_DIR):
+-	cd deps              && wget -4 $(UV_URL) && tar xvf $(UV_FILE)
+-setup: deps/$(UV_DIR)
+-
+-setupwin:
+-	cd deps              && wget -4 $(UV_URL)
+-	cd deps              && tar xvf $(UV_FILE)
+-
+ push:
+ 	cd src/osc-bridge      && git push
+ 	cd src/mruby-qml-parse  && git push
+diff --git a/build_config.rb b/build_config.rb
+index 00f1f69..11ac15b 100644
+--- a/build_config.rb
++++ b/build_config.rb
+@@ -96,7 +96,6 @@ build_type.new(build_name) do |conf|
+   conf.cc do |cc|
+       cc.include_paths << "#{`pwd`.strip}/../deps/nanovg/src"
+       cc.include_paths << "#{`pwd`.strip}/../deps/pugl/"
+-      cc.include_paths << "#{`pwd`.strip}/../deps/libuv-v1.9.1/include/"
+       cc.include_paths << "/usr/share/mingw-w64/include/" if windows
+       cc.include_paths << "/usr/x86_64-w64-mingw32/include/" if windows
+       cc.flags << "-DLDBL_EPSILON=1e-6" if windows
+@@ -117,14 +116,14 @@ build_type.new(build_name) do |conf|
+       linker.flags_after_libraries  << "#{`pwd`.strip}/../deps/pugl/build/libpugl-0.a"
+       linker.flags_after_libraries  << "#{`pwd`.strip}/../deps/libnanovg.a"
+       if(!windows)
+-        linker.flags_after_libraries  << "#{`pwd`.strip}/../deps/libuv.a"
++        linker.flags_after_libraries  << "-luv"
+         if(ENV['OS'] != "Mac")
+           linker.libraries << 'GL'
+           linker.libraries << 'X11'
+         end
+         linker.flags_after_libraries  << "-lpthread -ldl -lm"
+       else
+-        linker.flags_after_libraries  << "#{`pwd`.strip}/../deps/libuv-win.a"
++        linker.flags_after_libraries  << "-luv"
+         linker.flags_after_libraries  << "-lws2_32 -lkernel32 -lpsapi -luserenv -liphlpapi"
+         linker.flags_after_libraries  << "-lglu32 -lgdi32 -lopengl32"
+       end
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 817e475979d..4c171b4da9b 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -24920,7 +24920,19 @@ in
 
   zscroll = callPackage ../applications/misc/zscroll {};
 
-  zynaddsubfx = callPackage ../applications/audio/zynaddsubfx { };
+  zynaddsubfx = zyn-fusion;
+
+  zynaddsubfx-fltk = callPackage ../applications/audio/zynaddsubfx {
+    guiModule = "fltk";
+  };
+
+  zynaddsubfx-ntk = callPackage ../applications/audio/zynaddsubfx {
+    guiModule = "ntk";
+  };
+
+  zyn-fusion = callPackage ../applications/audio/zynaddsubfx {
+    guiModule = "zest";
+  };
 
   ### BLOCKCHAINS / CRYPTOCURRENCIES / WALLETS
 

From 7b0aed2b06b1b4ad7d62d66805fab0b3f0c8f874 Mon Sep 17 00:00:00 2001
From: Tad Fisher <129148+tadfisher@users.noreply.github.com>
Date: Thu, 7 Jan 2021 12:25:50 -0800
Subject: [PATCH 38/45] enyo-doom: update license (#101410)

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
---
 pkgs/games/enyo-doom/default.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/games/enyo-doom/default.nix b/pkgs/games/enyo-doom/default.nix
index 0158dc2b531..7b6655d6464 100644
--- a/pkgs/games/enyo-doom/default.nix
+++ b/pkgs/games/enyo-doom/default.nix
@@ -20,7 +20,7 @@ mkDerivation rec {
   meta = {
     homepage = "https://gitlab.com/sdcofer70/enyo-doom";
     description = "Frontend for Doom engines";
-    license = stdenv.lib.licenses.gpl2;
+    license = stdenv.lib.licenses.gpl3Plus;
     platforms = stdenv.lib.platforms.unix;
     maintainers = [ stdenv.lib.maintainers.tadfisher ];
   };

From 976c3999a2275efb9e313885b019fe1e265f7aab Mon Sep 17 00:00:00 2001
From: Phillip Cloud <cloud@standard.ai>
Date: Thu, 7 Jan 2021 15:56:08 -0500
Subject: [PATCH 39/45] nvidia-docker: fix VERSION reporting bug

---
 pkgs/applications/virtualization/nvidia-docker/default.nix | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pkgs/applications/virtualization/nvidia-docker/default.nix b/pkgs/applications/virtualization/nvidia-docker/default.nix
index 6dfe3fb874e..3f75e36ccae 100644
--- a/pkgs/applications/virtualization/nvidia-docker/default.nix
+++ b/pkgs/applications/virtualization/nvidia-docker/default.nix
@@ -62,7 +62,10 @@ stdenv.mkDerivation rec {
 
   buildPhase = ''
     mkdir bin
+
     cp nvidia-docker bin
+    substituteInPlace bin/nvidia-docker --subst-var-by VERSION ${version}
+
     cp ${libnvidia-container}/bin/nvidia-container-cli bin
     cp ${nvidia-container-toolkit}/bin/nvidia-container-{toolkit,runtime-hook} bin
     cp ${nvidia-container-runtime}/bin/nvidia-container-runtime bin

From 86e29a0b72fa01c87b1ce78ba2dd3dc501b22791 Mon Sep 17 00:00:00 2001
From: Evils <evils.devils@protonmail.com>
Date: Wed, 23 Dec 2020 12:44:46 +0100
Subject: [PATCH 40/45] kicad: fix update.sh multiple tag reply handling

and fix tabs in update.sh
---
 pkgs/applications/science/electronics/kicad/update.sh | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/applications/science/electronics/kicad/update.sh b/pkgs/applications/science/electronics/kicad/update.sh
index cfd78323b77..099440956ae 100755
--- a/pkgs/applications/science/electronics/kicad/update.sh
+++ b/pkgs/applications/science/electronics/kicad/update.sh
@@ -144,7 +144,7 @@ for version in "${all_versions[@]}"; do
           for lib in "${libs[@]}"; do
             echo "Checking ${lib}" >&2
             url="${gitlab}/libraries/kicad-${lib}.git"
-            lib_rev="$(${get_rev} "${url}" "${version}" | cut -f1 | head -n1)"
+            lib_rev="$(${get_rev} "${url}" "${version}" | cut -f1 | tail -n1)"
             has_rev="$(grep -sm 1 "\"${pname}\"" -A 19 "${file}" | grep -sm 1 "${lib_rev}" || true)"
             has_hash="$(grep -sm 1 "\"${pname}\"" -A 20 "${file}" | grep -sm 1 "${lib}.sha256" || true)"
             if [[ -n ${has_rev} && -n ${has_hash} && -z ${clean} ]]; then
@@ -173,8 +173,8 @@ printf "}\n"
 } > "${tmp}"
 
 if grep '""' "${tmp}"; then
-	echo "empty value detected, out of space?" >&2
-	exit "1"
+  echo "empty value detected, out of space?" >&2
+  exit "1"
 fi
 
 mv "${tmp}" "${file}"

From 9be551c1d84362a7af3dfd3a4d492aca216ec16f Mon Sep 17 00:00:00 2001
From: Evils <evils.devils@protonmail.com>
Date: Wed, 23 Dec 2020 00:24:54 +0100
Subject: [PATCH 41/45] kicad: 5.1.8 -> 5.1.9

---
 .../science/electronics/kicad/versions.nix       | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/pkgs/applications/science/electronics/kicad/versions.nix b/pkgs/applications/science/electronics/kicad/versions.nix
index 9f00f3fa8ba..4bdefade5f1 100644
--- a/pkgs/applications/science/electronics/kicad/versions.nix
+++ b/pkgs/applications/science/electronics/kicad/versions.nix
@@ -3,19 +3,19 @@
 {
   "kicad" = {
     kicadVersion = {
-      version =			"5.1.8";
+      version =			"5.1.9";
       src = {
-        rev =			"db9833491010954bc27fac92c83d2864bd95c23c";
-        sha256 =		"08ni9j2lw2hjc1csk6rkydcxwdal6da17ch60zkjij5vfsif2hix";
+        rev =			"73d0e3b20dec05c4350efa5b69916eb29a7bfcb5";
+        sha256 =		"1cqh3bc9y140hbryfk9qavs2y3lj5sm9q0qjxcf4mm472afzckky";
       };
     };
     libVersion = {
-      version =			"5.1.8";
+      version =			"5.1.9";
       libSources = {
-        i18n.rev =		"78adcd19e7ed53f4889d6db65a33dd8ec2d323e9";
-        i18n.sha256 =		"0x0w2m6d3xfm22y4anp5j2j67iwzby149ynj6qjlw2kcsi8kwk1j";
-        symbols.rev =		"bf475af94877e8fd9cf80e667578ff61835e02bb";
-        symbols.sha256 =	"1ii3r813653ng2ycggnknqx4g3ja7dbm4qyxrf9aq48ws0xkvhx3";
+        i18n.rev =		"04f3231f60d55400cb81564b2cd465a57d5192d5";
+        i18n.sha256 =		"04jq1dcag6i2ljjfqrib65mn4wg4c4nmi7i946l3bywc0rkqsx1f";
+        symbols.rev =		"6dec5004b6a2679c19d4857bda2f90c5ab3a5726";
+        symbols.sha256 =	"0n25rq32jwyigfw26faqraillwv6zbi2ywy26dkz5zqlf5xp56ad";
         templates.rev =		"1ccbaf3704e8ff4030d0915f71e051af621ef7d7";
         templates.sha256 =	"1a8xfcbdbb4ylrb5m7n2jjk9kwvgmlx1pmnn2cwj327a2b3m4jjs";
         footprints.rev =	"302ac78bac21825532f970fb92714fa5973ad79b";

From 0448f1c082322c4fc9eeffbb039e28dbbba27541 Mon Sep 17 00:00:00 2001
From: Evils <evils.devils@protonmail.com>
Date: Wed, 23 Dec 2020 12:44:56 +0100
Subject: [PATCH 42/45] kicad-unstable: 2020-12-01 -> 2020-12-23

---
 .../science/electronics/kicad/versions.nix     | 18 +++++++++---------
 1 file changed, 9 insertions(+), 9 deletions(-)

diff --git a/pkgs/applications/science/electronics/kicad/versions.nix b/pkgs/applications/science/electronics/kicad/versions.nix
index 4bdefade5f1..8a5e5d8f5f5 100644
--- a/pkgs/applications/science/electronics/kicad/versions.nix
+++ b/pkgs/applications/science/electronics/kicad/versions.nix
@@ -27,25 +27,25 @@
   };
   "kicad-unstable" = {
     kicadVersion = {
-      version =			"2020-12-01";
+      version =			"2020-12-23";
       src = {
-        rev =			"3c521942ed52e83482c82d426170b4fbf327f846";
-        sha256 =		"sha256:09qab69sy3n44kjlzxxx7gbksyr1kg8n14kz0zf8n71zfcqagci4";
+        rev =			"912657dd238ad78cfc5d9d5e426ea850d5554fb3";
+        sha256 =		"1p5kr4d4zpajwdmya1f351y1ix8qmvsx1hrnvhzh7yc3g72kgxah";
       };
     };
     libVersion = {
-      version =			"2020-12-01";
+      version =			"2020-12-23";
       libSources = {
         i18n.rev =		"e89d9a89bec59199c1ade56ee2556591412ab7b0";
-        i18n.sha256 =		"sha256:04zaqyhj3qr4ymyd3k5vjpcna64j8klpsygcgjcv29s3rdi8glfl";
+        i18n.sha256 =		"04zaqyhj3qr4ymyd3k5vjpcna64j8klpsygcgjcv29s3rdi8glfl";
         symbols.rev =		"e538abb015b4f289910a6f26b2f1b9cb8bf2efdb";
-        symbols.sha256 =	"sha256:117y4cm46anlrnw6y6mdjgl1a5gab6h6m7cwx3q7qb284m9bs5gi";
+        symbols.sha256 =	"117y4cm46anlrnw6y6mdjgl1a5gab6h6m7cwx3q7qb284m9bs5gi";
         templates.rev =		"32a4f6fab863976fdcfa232e3e08fdcf3323a954";
-        templates.sha256 =	"sha256:13r94dghrh9slpj7nkzv0zqv5hk49s6pxm4q5ndqx0y8037ivmhk";
+        templates.sha256 =	"13r94dghrh9slpj7nkzv0zqv5hk49s6pxm4q5ndqx0y8037ivmhk";
         footprints.rev =	"15ffd67e01257d4d8134dbd6708cb58977eeccbe";
-        footprints.sha256 =	"sha256:1ad5k3wh2zqfibrar7pd3g363jk2q51dvraxnq3zlxa2x4znh7mw";
+        footprints.sha256 =	"1ad5k3wh2zqfibrar7pd3g363jk2q51dvraxnq3zlxa2x4znh7mw";
         packages3d.rev =	"d8b7e8c56d535f4d7e46373bf24c754a8403da1f";
-        packages3d.sha256 =	"sha256:0dh8ixg0w43wzj5h3164dz6l1vl4llwxhi3qcdgj1lgvrs28aywd";
+        packages3d.sha256 =	"0dh8ixg0w43wzj5h3164dz6l1vl4llwxhi3qcdgj1lgvrs28aywd";
       };
     };
   };

From e02bf0737b382a010e7930dd0529ea19e3d448fd Mon Sep 17 00:00:00 2001
From: Benjamin Asbach <asbachb@users.noreply.github.com>
Date: Tue, 5 Jan 2021 01:52:44 +0100
Subject: [PATCH 43/45] nufraw: init at 0.43-3

`nufraw` is used to manipulate raw images.
`nufraw-thumbnailer` is used to generate thumbnails for raw images.

relates #108444
---
 nixos/modules/config/system-path.nix          |  1 +
 pkgs/applications/graphics/nufraw/default.nix | 71 +++++++++++++++++++
 .../graphics/nufraw/nufraw.thumbnailer        |  4 ++
 pkgs/top-level/all-packages.nix               |  6 ++
 4 files changed, 82 insertions(+)
 create mode 100644 pkgs/applications/graphics/nufraw/default.nix
 create mode 100644 pkgs/applications/graphics/nufraw/nufraw.thumbnailer

diff --git a/nixos/modules/config/system-path.nix b/nixos/modules/config/system-path.nix
index 27d1cef849b..aee7a041d04 100644
--- a/nixos/modules/config/system-path.nix
+++ b/nixos/modules/config/system-path.nix
@@ -144,6 +144,7 @@ in
         "/share/kservicetypes5"
         "/share/kxmlgui5"
         "/share/systemd"
+        "/share/thumbnailers"
       ];
 
     system.path = pkgs.buildEnv {
diff --git a/pkgs/applications/graphics/nufraw/default.nix b/pkgs/applications/graphics/nufraw/default.nix
new file mode 100644
index 00000000000..678bc12278d
--- /dev/null
+++ b/pkgs/applications/graphics/nufraw/default.nix
@@ -0,0 +1,71 @@
+{ stdenv
+, fetchurl
+, lib
+
+, autoreconfHook
+, bzip2
+, cfitsio
+, exiv2
+, gettext
+, gtk2
+, gtkimageview
+, lcms2
+, lensfun
+, libjpeg
+, libtiff
+, perl
+, pkg-config
+, zlib
+
+, addThumbnailer ? false
+}:
+
+stdenv.mkDerivation rec {
+  pname = "nufraw";
+  version = "0.43-3";
+
+  src = fetchurl {
+    url = "mirror://sourceforge/nufraw/nufraw-${version}.tar.gz";
+    sha256 = "0b63qvw9r8kaqw36bk3a9zwxc41h8fr6498indkw4glrj0awqz9c";
+  };
+
+  nativeBuildInputs = [ autoreconfHook gettext perl pkg-config ];
+
+  buildInputs = [
+    bzip2
+    cfitsio
+    exiv2
+    gtk2
+    gtkimageview
+    lcms2
+    lensfun
+    libjpeg
+    libtiff
+    zlib
+  ];
+
+  configureFlags = [
+    "--enable-contrast"
+    "--enable-dst-correction"
+  ];
+
+  postInstall = lib.optionalString addThumbnailer ''
+    mkdir -p $out/share/thumbnailers
+    substituteAll ${./nufraw.thumbnailer} $out/share/thumbnailers/${pname}.thumbnailer
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = "https://nufraw.sourceforge.io/";
+    description = "Utility to read and manipulate raw images from digital cameras";
+    longDescription =
+      ''
+        A new version of the popular raw digital images manipulator ufraw.
+        Forks from the version 0.23 of ufraw (that's why the first nufraw version is the 0.24).
+        Nufraw offers the same features (gimp plugin, batch, ecc) and the same quality of
+        ufraw in a brand new improved user interface.
+      '';
+    license = licenses.gpl2Plus;
+    maintainers = with maintainers; [ asbachb ];
+    platforms   = [ "x86_64-linux" "i686-linux" ];
+  };
+}
diff --git a/pkgs/applications/graphics/nufraw/nufraw.thumbnailer b/pkgs/applications/graphics/nufraw/nufraw.thumbnailer
new file mode 100644
index 00000000000..34b2adc43ae
--- /dev/null
+++ b/pkgs/applications/graphics/nufraw/nufraw.thumbnailer
@@ -0,0 +1,4 @@
+[Thumbnailer Entry]
+TryExec=@out@/bin/nufraw-batch
+Exec=@out@/bin/nufraw-batch --silent --size %s --out-type=png --noexif --output=%o --embedded-image %i
+MimeType=image/x-canon-cr2;image/x-canon-crw;image/x-minolta-mrw;image/x-nikon-nef;image/x-pentax-pef;image/x-panasonic-rw2;image/x-panasonic-raw2;image/x-samsung-srw;image/x-olympus-orf;image/x-sony-arw
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 1796f04f308..66efc102d68 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -23504,6 +23504,12 @@ in
 
   muchsync = callPackage ../applications/networking/mailreaders/notmuch/muchsync.nix { };
 
+  nufraw = callPackage ../applications/graphics/nufraw/default.nix { };
+
+  nufraw-thumbnailer = callPackage ../applications/graphics/nufraw/default.nix {
+    addThumbnailer = true;
+  };
+
   notmuch-addrlookup = callPackage ../applications/networking/mailreaders/notmuch-addrlookup { };
 
   nova-filters =  callPackage ../applications/audio/nova-filters { };

From f44ed8abd41d7fcd86a632ffb9c800f4665decbe Mon Sep 17 00:00:00 2001
From: Arthur Gautier <baloo@superbaloo.net>
Date: Thu, 7 Jan 2021 22:26:58 +0000
Subject: [PATCH 44/45] libplacebo: fixup glslang headers path

See: https://github.com/NixOS/nixpkgs/issues/108723

Signed-off-by: Arthur Gautier <baloo@superbaloo.net>
---
 pkgs/development/libraries/libplacebo/default.nix   |  4 ++++
 .../libraries/libplacebo/glsl-import.patch          | 13 +++++++++++++
 2 files changed, 17 insertions(+)
 create mode 100644 pkgs/development/libraries/libplacebo/glsl-import.patch

diff --git a/pkgs/development/libraries/libplacebo/default.nix b/pkgs/development/libraries/libplacebo/default.nix
index ac8552fa9ef..7d120f604d8 100644
--- a/pkgs/development/libraries/libplacebo/default.nix
+++ b/pkgs/development/libraries/libplacebo/default.nix
@@ -17,6 +17,10 @@ stdenv.mkDerivation rec {
   pname = "libplacebo";
   version = "2.72.2";
 
+  patches = [
+    ./glsl-import.patch
+  ];
+
   src = fetchFromGitLab {
     domain = "code.videolan.org";
     owner = "videolan";
diff --git a/pkgs/development/libraries/libplacebo/glsl-import.patch b/pkgs/development/libraries/libplacebo/glsl-import.patch
new file mode 100644
index 00000000000..f2ef362c65b
--- /dev/null
+++ b/pkgs/development/libraries/libplacebo/glsl-import.patch
@@ -0,0 +1,13 @@
+diff --git a/src/glsl/glslang.cc b/src/glsl/glslang.cc
+index f701acc..c64cbf5 100644
+--- a/src/glsl/glslang.cc
++++ b/src/glsl/glslang.cc
+@@ -26,7 +26,7 @@ extern "C" {
+ 
+ #include <glslang/Include/ResourceLimits.h>
+ #include <glslang/Public/ShaderLang.h>
+-#include <SPIRV/GlslangToSpv.h>
++#include <glslang/SPIRV/GlslangToSpv.h>
+ 
+ #include "glslang.h"
+ 

From 4312cd74f13574cbe6a13c33064482964e4c5853 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Thu, 7 Jan 2021 14:39:27 -0500
Subject: [PATCH 45/45] linux-hardened: Track extra version

Fixes #108707
---
 pkgs/os-specific/linux/kernel/hardened/patches.json |  5 +++++
 pkgs/os-specific/linux/kernel/hardened/update.py    | 11 +++++++----
 pkgs/os-specific/linux/kernel/patches.nix           |  3 ++-
 pkgs/top-level/all-packages.nix                     |  2 +-
 4 files changed, 15 insertions(+), 6 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json
index e51b8c4bb2f..72849c58db8 100644
--- a/pkgs/os-specific/linux/kernel/hardened/patches.json
+++ b/pkgs/os-specific/linux/kernel/hardened/patches.json
@@ -1,25 +1,30 @@
 {
     "4.14": {
+        "extra": "",
         "name": "linux-hardened-4.14.213.a.patch",
         "sha256": "0lkjgg6cbsaiypxij7p00q3y094qf0h172hc2p7wgy39777b45a7",
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.213.a/linux-hardened-4.14.213.a.patch"
     },
     "4.19": {
+        "extra": ".a",
         "name": "linux-hardened-4.19.165.a.patch",
         "sha256": "06v34jaj4jg6f3v05wbkkfnr69ahxqyyq0gam4ma3wgm74x6cf3s",
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.165.a/linux-hardened-4.19.165.a.patch"
     },
     "5.10": {
+        "extra": ".a",
         "name": "linux-hardened-5.10.5.a.patch",
         "sha256": "1fq2n60brhi6wjazkdgj2aqc4maskvlymbznl03hvj0x5kahjxvx",
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.10.5.a/linux-hardened-5.10.5.a.patch"
     },
     "5.4": {
+        "extra": ".a",
         "name": "linux-hardened-5.4.87.a.patch",
         "sha256": "01hpww6lm00iry8z4z86hh86x66h3xbmxknxhmmhh2zwz6ahkmfd",
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.87.a/linux-hardened-5.4.87.a.patch"
     },
     "5.9": {
+        "extra": "",
         "name": "linux-hardened-5.9.16.a.patch",
         "sha256": "024wdzc9bwgr4nd4z0l6bazcl35jczhsmdl2lb26bvffjwg207rw",
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.9.16.a/linux-hardened-5.9.16.a.patch"
diff --git a/pkgs/os-specific/linux/kernel/hardened/update.py b/pkgs/os-specific/linux/kernel/hardened/update.py
index d6443d2e751..b831c649109 100755
--- a/pkgs/os-specific/linux/kernel/hardened/update.py
+++ b/pkgs/os-specific/linux/kernel/hardened/update.py
@@ -31,7 +31,7 @@ VersionComponent = Union[int, str]
 Version = List[VersionComponent]
 
 
-Patch = TypedDict("Patch", {"name": str, "url": str, "sha256": str})
+Patch = TypedDict("Patch", {"name": str, "url": str, "sha256": str, "extra": str})
 
 
 @dataclass
@@ -99,7 +99,10 @@ def verify_openpgp_signature(
             return False
 
 
-def fetch_patch(*, name: str, release: GitRelease) -> Optional[Patch]:
+def fetch_patch(*, name: str, release_info: ReleaseInfo) -> Optional[Patch]:
+    release = release_info.release
+    extra = f'.{release_info.version[-1]}'
+
     def find_asset(filename: str) -> str:
         try:
             it: Iterator[str] = (
@@ -130,7 +133,7 @@ def fetch_patch(*, name: str, release: GitRelease) -> Optional[Patch]:
     if not sig_ok:
         return None
 
-    return Patch(name=patch_filename, url=patch_url, sha256=sha256)
+    return Patch(name=patch_filename, url=patch_url, sha256=sha256, extra=extra)
 
 
 def parse_version(version_str: str) -> Version:
@@ -252,7 +255,7 @@ for kernel_key in sorted(releases.keys()):
         update = True
 
     if update:
-        patch = fetch_patch(name=name, release=release)
+        patch = fetch_patch(name=name, release_info=release_info)
         if patch is None:
             failures = True
         else:
diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix
index b0eb2be2a4c..a1a69000710 100644
--- a/pkgs/os-specific/linux/kernel/patches.nix
+++ b/pkgs/os-specific/linux/kernel/patches.nix
@@ -41,7 +41,8 @@
   hardened = let
     mkPatch = kernelVersion: src: {
       name = lib.removeSuffix ".patch" src.name;
-      patch = fetchurl src;
+      patch = fetchurl (lib.filterAttrs (k: v: k != "extra") src);
+      extra = src.extra;
     };
     patches = builtins.fromJSON (builtins.readFile ./hardened/patches.json);
   in lib.mapAttrs mkPatch patches;
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 560d979621f..606b2d5cd66 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -19014,7 +19014,7 @@ in
         kernelPatches.tag_hardened
         kernelPatches.hardened.${kernel.meta.branch}
       ];
-      modDirVersionArg = kernel.modDirVersion + "-hardened";
+      modDirVersionArg = kernel.modDirVersion + (kernelPatches.hardened.${kernel.meta.branch}).extra + "-hardened";
       isHardened = true;
   });