From d849c0e2e1236b22e298254e75f8d30a665af66f Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Sun, 30 Oct 2016 11:41:20 -0400 Subject: [PATCH 001/216] Build support --- pkgs/build-support/fetchurl/mirrors.nix | 5 ++++ .../java-modules/build-maven-package.nix | 26 +++++++++++++++++++ pkgs/development/java-modules/m2install.nix | 21 +++++++++++++++ pkgs/top-level/all-packages.nix | 4 +++ 4 files changed, 56 insertions(+) create mode 100644 pkgs/development/java-modules/build-maven-package.nix create mode 100644 pkgs/development/java-modules/m2install.nix diff --git a/pkgs/build-support/fetchurl/mirrors.nix b/pkgs/build-support/fetchurl/mirrors.nix index 5ae5eb105e7..0304165828f 100644 --- a/pkgs/build-support/fetchurl/mirrors.nix +++ b/pkgs/build-support/fetchurl/mirrors.nix @@ -396,4 +396,9 @@ rec { https://archive.mozilla.org/pub/ ]; + # Maven Central + maven = [ + http://repo1.maven.org/maven2 + http://central.maven.org/maven2 + ]; } diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix new file mode 100644 index 00000000000..182740c552d --- /dev/null +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -0,0 +1,26 @@ +{ stdenv, maven, lib }: +{ mavenDeps, src, name, meta, m2Path, ... }: + +with builtins; +with lib; + +stdenv.mkDerivation rec { + inherit mavenDeps src name meta m2Path; + + flatDeps = flatten mavenDeps; + + propagatedBuildInput = [ maven ] ++ flatDeps; + + find = ''find ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}''; + copy = ''cp -rs ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/*") flatDeps)} $out/m2''; + + buildPhase = '' + mkdir -p $out/m2/${m2Path} + ${optionalString (length flatDeps > 0) find} + ${optionalString (length flatDeps > 0) copy} + echo "\ + tmpm2file://$out/m2*\ + $out/m2" >> $out/m2/settings.xml + ${maven}/bin/mvn clean install -Dmaven.test.skip=true -gs $out/m2/settings.xml + ''; +} diff --git a/pkgs/development/java-modules/m2install.nix b/pkgs/development/java-modules/m2install.nix new file mode 100644 index 00000000000..56ae8132c61 --- /dev/null +++ b/pkgs/development/java-modules/m2install.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl }: +{ version, baseName, package, sha512, type ? "jar" }: + +let + name = "${baseName}-${version}"; + m2Path = "${package}/${baseName}/${version}"; + m2File = "${name}.${type}"; + src = fetchurl rec { + inherit sha512; + url = "mirror://maven/${m2Path}/${m2File}"; + }; +in stdenv.mkDerivation rec { + inherit name m2Path m2File src; + + installPhase = '' + mkdir -p $out/m2/$m2Path + cp $src $out/m2/$m2Path/$m2File + ''; + + phases = "installPhase"; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 6cb32f3ce4d..bd0bdc0b510 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9761,6 +9761,10 @@ in leaps = callPackage ../development/tools/leaps { }; + ### DEVELOPMENT / JAVA MODULES + + javaPackages = recurseIntoAttrs (callPackage ./java-packages.nix { }); + ### DEVELOPMENT / LISP MODULES asdf = callPackage ../development/lisp-modules/asdf { From 1f2e19b67cdb68a89fc99a70eff5b851e488ab97 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Sun, 30 Oct 2016 11:44:56 -0400 Subject: [PATCH 002/216] Partial junit_4_12 --- .../java-modules/apache/commons-cli.nix | 14 + .../java-modules/apache/commons-lang.nix | 14 + .../java-modules/beanshell/bsh.nix | 14 + .../java-modules/classworlds/classworlds.nix | 14 + .../java-modules/eclipse/aether-util.nix | 15 + .../java-modules/hamcrest/core.nix | 16 + .../java-modules/junit/default.nix | 33 ++ .../java-modules/maven/artifact-manager.nix | 14 + .../java-modules/maven/artifact.nix | 25 ++ .../maven/common-artifact-filters.nix | 14 + pkgs/development/java-modules/maven/core.nix | 14 + .../java-modules/maven/dependency-tree.nix | 14 + .../java-modules/maven/doxia-sink-api.nix | 14 + .../java-modules/maven/enforcer.nix | 25 ++ .../java-modules/maven/error-diagnostics.nix | 14 + pkgs/development/java-modules/maven/model.nix | 25 ++ .../java-modules/maven/monitor.nix | 14 + .../java-modules/maven/plugin-api.nix | 36 ++ .../java-modules/maven/plugin-descriptor.nix | 14 + .../maven/plugin-parameter-documenter.nix | 14 + .../java-modules/maven/plugin-registry.nix | 14 + .../java-modules/maven/profile.nix | 14 + .../java-modules/maven/project.nix | 14 + .../java-modules/maven/reporting-api.nix | 14 + .../maven/repository-metadata.nix | 14 + .../java-modules/maven/settings.nix | 14 + .../development/java-modules/mavenPlugins.nix | 113 ++++++ .../plexus/component-annotations.nix | 14 + .../java-modules/plexus/container-default.nix | 14 + pkgs/development/java-modules/plexus/i18n.nix | 14 + .../java-modules/plexus/interactivity-api.nix | 14 + .../development/java-modules/plexus/utils.nix | 47 +++ pkgs/development/java-modules/poms.nix | 331 ++++++++++++++++++ pkgs/top-level/java-packages.nix | 113 ++++++ 34 files changed, 1101 insertions(+) create mode 100644 pkgs/development/java-modules/apache/commons-cli.nix create mode 100644 pkgs/development/java-modules/apache/commons-lang.nix create mode 100644 pkgs/development/java-modules/beanshell/bsh.nix create mode 100644 pkgs/development/java-modules/classworlds/classworlds.nix create mode 100644 pkgs/development/java-modules/eclipse/aether-util.nix create mode 100644 pkgs/development/java-modules/hamcrest/core.nix create mode 100644 pkgs/development/java-modules/junit/default.nix create mode 100644 pkgs/development/java-modules/maven/artifact-manager.nix create mode 100644 pkgs/development/java-modules/maven/artifact.nix create mode 100644 pkgs/development/java-modules/maven/common-artifact-filters.nix create mode 100644 pkgs/development/java-modules/maven/core.nix create mode 100644 pkgs/development/java-modules/maven/dependency-tree.nix create mode 100644 pkgs/development/java-modules/maven/doxia-sink-api.nix create mode 100644 pkgs/development/java-modules/maven/enforcer.nix create mode 100644 pkgs/development/java-modules/maven/error-diagnostics.nix create mode 100644 pkgs/development/java-modules/maven/model.nix create mode 100644 pkgs/development/java-modules/maven/monitor.nix create mode 100644 pkgs/development/java-modules/maven/plugin-api.nix create mode 100644 pkgs/development/java-modules/maven/plugin-descriptor.nix create mode 100644 pkgs/development/java-modules/maven/plugin-parameter-documenter.nix create mode 100644 pkgs/development/java-modules/maven/plugin-registry.nix create mode 100644 pkgs/development/java-modules/maven/profile.nix create mode 100644 pkgs/development/java-modules/maven/project.nix create mode 100644 pkgs/development/java-modules/maven/reporting-api.nix create mode 100644 pkgs/development/java-modules/maven/repository-metadata.nix create mode 100644 pkgs/development/java-modules/maven/settings.nix create mode 100644 pkgs/development/java-modules/mavenPlugins.nix create mode 100644 pkgs/development/java-modules/plexus/component-annotations.nix create mode 100644 pkgs/development/java-modules/plexus/container-default.nix create mode 100644 pkgs/development/java-modules/plexus/i18n.nix create mode 100644 pkgs/development/java-modules/plexus/interactivity-api.nix create mode 100644 pkgs/development/java-modules/plexus/utils.nix create mode 100644 pkgs/development/java-modules/poms.nix create mode 100644 pkgs/top-level/java-packages.nix diff --git a/pkgs/development/java-modules/apache/commons-cli.nix b/pkgs/development/java-modules/apache/commons-cli.nix new file mode 100644 index 00000000000..74087a04e0c --- /dev/null +++ b/pkgs/development/java-modules/apache/commons-cli.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + commonsCli_1_0 = map (obj: fetchMaven { + version = "1.0"; + baseName = "commons-cli"; + package = "/commons-cli"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1pm5ba95viabcgpjhsqw21iwis9ajn8hwpyc6rzs9frr5k62hs7lj8darxmmp21hf14mxrs37a8swayhagq6i6g8js4nl4r8mmwjlvp"; } + { type = "jar"; sha512 = "0ybdbpfzadkncwcmnzkscbp2fhmcsqmpy60qppz7s8hs00hgqy64jr4qpdyz5bj0l4bc434vn0pv4gzxzi7y1lhh7b2rk4zv1mgs3ff"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/commons-lang.nix b/pkgs/development/java-modules/apache/commons-lang.nix new file mode 100644 index 00000000000..eb60d19e818 --- /dev/null +++ b/pkgs/development/java-modules/apache/commons-lang.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + commonsLang_2_3 = map (obj: fetchMaven { + version = "2.3"; + baseName = "commons-lang"; + package = "/commons-lang"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "0i94xb3fgq0ig0aids9r1h1kblhlf762gsjxh422ra23saa4474q4iywgfk596bpcflngf2sarq8ch6lw09p0g43779d23b74bd939n"; } + { type = "jar"; sha512 = "1f30pryvd39m2yazflzy5l1h4l473dj8ccrd9v8z8lb6iassn4xc142f2snkzxlc7ncqsi6fbfd3zfxsy8afivmxmxds6mbsrxayqwk"; } + ]; +} diff --git a/pkgs/development/java-modules/beanshell/bsh.nix b/pkgs/development/java-modules/beanshell/bsh.nix new file mode 100644 index 00000000000..e636fe557ec --- /dev/null +++ b/pkgs/development/java-modules/beanshell/bsh.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + bsh_2_0_b4 = map (obj: fetchMaven { + version = "2.0b4"; + baseName = "bsh"; + package = "/org/beanshell"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1xgl3zw2gaca7f09224k3bi22dqdcd589c5jqk7p87s6dlbaai8sivklbq225yxmcpmwsi98r0a6xlgxnxnhk3b0qplf1bj4qp17dx9"; } + { type = "jar"; sha512 = "1idcadxcphpqh2f6qjijd2gdcklcv9qmv1aalh2z5rk5vipqm89hm05lwjapw2gy5x5q1grzxraalnspbhacrrwm15np07580k6vki9"; } + ]; +} diff --git a/pkgs/development/java-modules/classworlds/classworlds.nix b/pkgs/development/java-modules/classworlds/classworlds.nix new file mode 100644 index 00000000000..a177927d3d6 --- /dev/null +++ b/pkgs/development/java-modules/classworlds/classworlds.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + classworlds_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "classworlds"; + package = "/classworlds"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "202zfp93ly15q5iamjwy2vsrip8i87pmv5pqyxl9v7wvcmd4flyhlhkkx7hw9jy82dbzglrs2jklsm96dy22nv1njm5dw5kbzarhakq"; } + { type = "jar"; sha512 = "1cs8v7hhbgwfmlx4dm7r78mki5vk0gjn798qy4w1qzkz90hf9yl52srpjair2fg96qsmk22nd73r92vdmjji65l75ji3kfghzx9872x"; } + ]; +} diff --git a/pkgs/development/java-modules/eclipse/aether-util.nix b/pkgs/development/java-modules/eclipse/aether-util.nix new file mode 100644 index 00000000000..33ba3d5edd7 --- /dev/null +++ b/pkgs/development/java-modules/eclipse/aether-util.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + aetherUtil_0_9_0_M2 = map (obj: fetchMaven { + version = "0.9.0.M2"; + baseName = "aether-util"; + package = "/org/eclipse/aether"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1qh3vzdf33fffsry9256vbaskhp0xsw1d8s7c429a1hiyz8qi9p2sqsh2mqj5vrfj0mxri1nm68pv0nm9fhqzrwfy6f2sihl8rp7df1"; } + { type = "pom"; sha512 = "2a0z5r5avm7gfkabkha6h1b0gbnma725dqby9wz6lhhkwqhn3zmdr69a0ll6vfh1mv0ir4spcr02hi61xlng4lakdlmwllm0g5ixaiz"; } + ]; +} + diff --git a/pkgs/development/java-modules/hamcrest/core.nix b/pkgs/development/java-modules/hamcrest/core.nix new file mode 100644 index 00000000000..1414dc1fe6b --- /dev/null +++ b/pkgs/development/java-modules/hamcrest/core.nix @@ -0,0 +1,16 @@ +{ fetchMaven }: + +rec { + # Ant build, just fetch the binary + hamcrestCore_1_3 = map (obj: fetchMaven { + version = "1.3"; + baseName = "hamcrest-core"; + package = "/org/hamcrest"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "14vx453pk5shchdn3sz17s5im1cq1vav19rwnybafnsq2blfn3d0xz01cf9h1gnzclivhc4wgf7vvs23wcr7iiy4nksakxcb9rswdz2"; } + { type = "pom"; sha512 = "3rn4bs9ixdnwg916qdkjjv9m17l0ym7zj6cxaf18304wlbshxcb1fpa11rnll9g76ap0f4z8r70z3snfj6kyf6sw9xf9xpq4n1796rg"; } + ]; +} + diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix new file mode 100644 index 00000000000..7325b07700f --- /dev/null +++ b/pkgs/development/java-modules/junit/default.nix @@ -0,0 +1,33 @@ +{ stdenv, pkgs, mavenbuild }: + +with pkgs.javaPackages; + +rec { + junitGen = { mavenDeps, sha512, version }: mavenbuild rec { + inherit mavenDeps sha512 version; + + name = "junit-${version}"; + src = pkgs.fetchFromGitHub { + inherit sha512; + owner = "junit-team"; + repo = "junit4"; + rev = "r${version}"; + }; + m2Path = "/junit/junit/${version}"; + + meta = { + homepage = http://junit.org/junit4/; + description = "Simple framework to write repeatable tests. It is an instance of the xUnit architecture for unit testing frameworks"; + license = stdenv.lib.licenses.epl10; + platforms = stdenv.lib.platforms.all; + maintainers = with stdenv.lib.maintainers; + [ nequissimus ]; + }; + }; + + junit_4_12 = junitGen { + mavenDeps = [ mavenPlugins.animalSniffer_1_11 hamcrestCore_1_3 plexusUtils_1_1 ] ++ mavenPlugins.mavenDefault; + sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; + version = "4.12"; + }; +} diff --git a/pkgs/development/java-modules/maven/artifact-manager.nix b/pkgs/development/java-modules/maven/artifact-manager.nix new file mode 100644 index 00000000000..b46fb254b17 --- /dev/null +++ b/pkgs/development/java-modules/maven/artifact-manager.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenArtifactManager_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-artifact-manager"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1vvxf2dannx9p2qvlbmrxfni5mc0f3722p3bcdz6bk3z4dhb2hlw2wx17nvirq5r3k43azgp13mg0638saz7v1g23f07n9yzm979f0p"; } + { type = "pom"; sha512 = "2v7371gsarjb4s2bp5vclqgdg82mh7nzy7af31g9z20q2r6ndw024xa8bpcxp227yv83lpawbhq0ysg0glnw9ql54100h9hbllam0p8"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/artifact.nix b/pkgs/development/java-modules/maven/artifact.nix new file mode 100644 index 00000000000..d0b528b916a --- /dev/null +++ b/pkgs/development/java-modules/maven/artifact.nix @@ -0,0 +1,25 @@ +{ fetchMaven }: + +rec { + mavenArtifact_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "17g913m1zbrvarkwvmz5xx9nv7mrk2984rc9pkbc2laid7n1nb226g0262xyhcnc2s57av96337ag6jg2bq9p1kgx7gbd2z6gnvkkia"; } + { type = "pom"; sha512 = "0g0cbqihzxyaa1b0z9a7qb8lkhcm8bzxi7qnqaab2n2zaaql6jyy7cf4z4yzqw3yfj7ylqvydiwp32j2c7nqacyx0hmcydqkqg46kxv"; } + ]; + + mavenArtifact_3_0_3 = map (obj: fetchMaven { + version = "3.0.3"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0f842m7wi9ajvphgshnmsn8dppiwr326yp663gic45xzkpfvka118npl8xxqnr683dipvbnbrddim974qcpz4mgpypir0922803i3qv"; } + { type = "pom"; sha512 = "3wpambpgm68rap906gdvwlbywgjs57nkc8k05r8rx701800zbpwlrzc9b3ipxgjb7y6f2z1vi14yj9ia12wv7k8jn2aspf31pzp5plq"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/common-artifact-filters.nix b/pkgs/development/java-modules/maven/common-artifact-filters.nix new file mode 100644 index 00000000000..4d46de674b5 --- /dev/null +++ b/pkgs/development/java-modules/maven/common-artifact-filters.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenCommonArtifactFilters_1_4 = map (obj: fetchMaven { + version = "1.4"; + baseName = "maven-common-artifact-filters"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "21wyk4llwjyanlggy281f9n0sjshjqvd322lbhxmzn42cd9vmj0s6xih82jwqlkcxkypwymyj1gl7van55ibd98p1jjjvr93gs1cn14"; } + { type = "jar"; sha512 = "1bv4lp1a8sb79almnygiq0pmm0fdhy9pyakp6xhz91b4v1cqg03sb586yc4lg2934yv4jjbybqjbh4l0y3kgnanjbxdxdgxgyf14iif"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/core.nix b/pkgs/development/java-modules/maven/core.nix new file mode 100644 index 00000000000..6aed7095ad2 --- /dev/null +++ b/pkgs/development/java-modules/maven/core.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenCore_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-core"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1a17qcd05v08jpd9ah650kbmrdxrxjfl2jgx9fnc89x4ahzmml9fr2qal0pwnn0sw3g3j1cqbry9lwq5hzja6x779s90hqrb72s49l1"; } + { type = "jar"; sha512 = "0qp0kns07h4j7d67z0j09kjn0hwf6k6iz4vp2pmisx131f98acm516y8ca35ly7pp6zn9mdk3c4nh9c0rd7xnqvi12ijqrfvg01dri2"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/dependency-tree.nix b/pkgs/development/java-modules/maven/dependency-tree.nix new file mode 100644 index 00000000000..cdd626e5848 --- /dev/null +++ b/pkgs/development/java-modules/maven/dependency-tree.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenDependencyTree_2_1 = map (obj: fetchMaven { + version = "2.1"; + baseName = "maven-dependency-tree"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "29ibiyc1x20yrnxgcpvvf3k0pcjq63l98lakk10gipmx8a7bqs6m7npcqhzq6a3xrrcnz4pp7mj9gkmcs1svhg3qj4778cdax5pfy39"; } + { type = "jar"; sha512 = "3mr5ph5yngfvqwvrbiwvs66d8gbhpjsp009q5hrarkg53kwlphy6rmvdkfzp4j5rz8dd4cirv7vf6nhhrpdnjy2fc8bhx2s61zissnd"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/doxia-sink-api.nix b/pkgs/development/java-modules/maven/doxia-sink-api.nix new file mode 100644 index 00000000000..6acf39b480d --- /dev/null +++ b/pkgs/development/java-modules/maven/doxia-sink-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenDoxiaSinkApi_1_0_alpha10 = map (obj: fetchMaven { + version = "1.0-alpha-10"; + baseName = "doxia-sink-api"; + package = "/org/apache/maven/doxia"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "31n980rx8m3sy6ia6izdjmc95pd8gvy31a1j933qznvs10flsf3gvmnywcyncf9y4pvaynddqjfvjpvf1qkxcw9jwjcmq7ka3325fi9"; } + { type = "jar"; sha512 = "1bgp929njkqvzv1q07drfncqagpkfw1ksi0cvwqq69ww2lbg3rmq2if11j7ldwn2rdvmfrr9qyhg34vwz13gfh7yylkw0il0q9h9hlj"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/enforcer.nix b/pkgs/development/java-modules/maven/enforcer.nix new file mode 100644 index 00000000000..83037e6adee --- /dev/null +++ b/pkgs/development/java-modules/maven/enforcer.nix @@ -0,0 +1,25 @@ +{ fetchMaven }: + +rec { + mavenEnforcerApi_1_3_1 = map (obj: fetchMaven { + version = "1.3.1"; + baseName = "enforcer-api"; + package = "/org/apache/maven/enforcer"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "2bh75j9f1hf80yhikd2r014kq8pgf9b49w62w7v9772kwdsza84v527vph0ifldpk561aivz5v604a9rpw5zb03gkixr51qspmsg2hp"; } + { type = "jar"; sha512 = "2pi1df9brkrlqp36pvk8ccc308b2882nmb2c1pbp2vaf4v95wm529vyng5gv9012l6c293ciamaxiv019zv04hl3zsgpk0m5fg3qhs0"; } + ]; + + mavenEnforcerRules_1_3_1 = map (obj: fetchMaven { + version = "1.3.1"; + baseName = "enforcer-rules"; + package = "/org/apache/maven/enforcer"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "16i11v6rlym87zvq3x0nn7m8g5w3vyf3g097cz79a3hjmzf3zk12837wi007697nr5dfd3sq9r9cgxmqw77y6cyphaic71hmhv4jx7c"; } + { type = "jar"; sha512 = "33xp9dgdml15bf8dpw4b61wfqnkypixd697q60lan3hvv10bs33jfw8xxsj2pl2l11hca6whk2c1wdddc913s88r13zzaghgizwsx55"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/error-diagnostics.nix b/pkgs/development/java-modules/maven/error-diagnostics.nix new file mode 100644 index 00000000000..22ac264bdd1 --- /dev/null +++ b/pkgs/development/java-modules/maven/error-diagnostics.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenErrorDiagnostics_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-error-diagnostics"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3czdrv2s1gafclm57m5qxw3aaxrm3r3z9yggscxg60fk0hn6jlpygclghkrl2g7c8ggdqdd01y6zcj1wgzq32yp1cd4s3kakf2y25dm"; } + { type = "pom"; sha512 = "3l0cpg0ssivfnadffc68cnac65vpfpl0qa9a4ik82jxcwhfa00337jxz37vyqaqs1vjrvd2cqhmjayddwkpwc8aqnz3nr0rlqnqzm7g"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/model.nix b/pkgs/development/java-modules/maven/model.nix new file mode 100644 index 00000000000..fa3abf7c4d2 --- /dev/null +++ b/pkgs/development/java-modules/maven/model.nix @@ -0,0 +1,25 @@ +{ fetchMaven }: + +rec { + mavenModel_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-model"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "14pxgdcim20x9lisf510nazzlcjxv9fpqabkdn0d86qa7d9270m4fmya5crasx2np9h0gxl407d77vcjf99fdxizg7i32w35yljqp3z"; } + { type = "pom"; sha512 = "2vvyawhfq0gwa54ir5l2drcfxphkd47ghwgz89v3vsqgjry714vp01pa5a6yjlwfd45mknyrb71ws6dki4zjgzhdm09ck7cxg5qkpr9"; } + ]; + + mavenModel_3_0_3 = map (obj: fetchMaven { + version = "3.0.3"; + baseName = "maven-model"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "13b339n0iibvy9x1d34b6gsnlz2s26ap866nhm4wyrlb0hkyb4zf7xbvc8aigr9zzzc4msn3yi98ylgsbinxx8dkbs89x1amnd7v1nr"; } + { type = "pom"; sha512 = "38dbv2z16h1wq16pxx5nrpndpkmnmj6wxsa4x13hsm7skmfwxdr51ddjddc4qlqk9dfnny0yv3lf009k0pfs06hfn0xiv85ki5y1hfg"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/monitor.nix b/pkgs/development/java-modules/maven/monitor.nix new file mode 100644 index 00000000000..1304304257a --- /dev/null +++ b/pkgs/development/java-modules/maven/monitor.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenMonitor_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-monitor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2cxspfhf3sbz68y1kjqhw2lny6s1f1kf8sfad6f1qp653g4213c9yy7y3qk9szp528866vw7daa9gbymxd66k3bm09g1q4kgnkg5wn3"; } + { type = "pom"; sha512 = "0h9brjzkvxfmk549wmq4mw71yhhf1qb1diin9rnsc5nlvh189k60088b5pcc14324gffkrvdghivfy8spjci5izmay87qk7hfsg2lxc"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/plugin-api.nix b/pkgs/development/java-modules/maven/plugin-api.nix new file mode 100644 index 00000000000..56069bf1970 --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-api.nix @@ -0,0 +1,36 @@ +{ fetchMaven }: + +rec { + mavenPluginApi_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-plugin-api"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3926imf3d59530ldz9hajjq6xkb5mb1llx7br0025p8c1xfhgr4hqm6dripi0yd9f53sbdxhla5ly68q2vsbzbklpldrvrbz6b5wrql"; } + { type = "jar"; sha512 = "34fb0yw3z7bxlxxs8wmv59g351jkfp16ljq5zmyksq54kz2wvkv39w7bcnvlkbdwaggm7cd2jr9s4y4lynkblp8ydf9jbq8awwr7c00"; } + ]; + + mavenPluginApi_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-plugin-api"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "23qj23k049jz4mp77h2wj4mnjqszb99l4xvxas93cpnbdl51a5s0d0rsg60a8zg0ic04n6fr8nig0vvmmcsggx93a96w4p3na97q30n"; } + { type = "jar"; sha512 = "0hvl32k09wr34b6v0wl27y6353mx3afsgwyfw0vpx5aa5b8wiw86vlbknh3kjl43zp2ffxq6b4c7n07jq3y2wczz08gscs5apszhj9q"; } + ]; + + mavenPluginApi_3_0_3 = map (obj: fetchMaven { + version = "3.0.3"; + baseName = "maven-plugin-api"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "17zyw3j4zbg1hhj18i4q1f0r8gdxl3q9x5ksyqlyr0mrw2sadc6lvbbhyp3l7vsbddl4bgdx36gwvjp5d97gbmk1nbpi1vabadfhq76"; } + { type = "jar"; sha512 = "0rk2nzkwcrkfy3vs0zl0l2lxp3w4hkwxrypisbivv5al7sc8lbzls6jgpp3h5gx9kk4scjj24qf5vyimnbadj63rvqffg581fs2zgl9"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/plugin-descriptor.nix b/pkgs/development/java-modules/maven/plugin-descriptor.nix new file mode 100644 index 00000000000..35b829a8578 --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-descriptor.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenPluginDescriptor_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-plugin-descriptor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0q9jw44v1mi489bqmdvj7jpv753vdp9jzp50ky6pd912x190spkw6ccmpc87azmwsf131d4h0k0fqi6iidl9ip22a8rwaa22yq7gxi8"; } + { type = "pom"; sha512 = "0c4hrb6qhi8wxw7acyphv6l33973vhvg7vjknc3bx8bg36404ky9k78q79r3p2an2886hdfayb0l7wji86bq4q8464754gbx02ci7r8"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix new file mode 100644 index 00000000000..17ed70bfa9f --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenPluginParameterDocumenter_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-plugin-parameter-documenter"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0djr58wp7a93p96sn0k24d6liabd7a4qvsd0p7lk88ws3jwfw5bqh6d0a3fyc86fkask1wi7krrvsm7i6yiw1f1r0d6xjzj8fx5m4kz"; } + { type = "pom"; sha512 = "39mhwcxwcqgy6pk3qlabs1b8k8fqvkps6r1zb1n7phfwh4dklngyqdrxh90j3wjg3692l7as1k0439z2x124wlh6bzpv83jmx64jiyh"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/plugin-registry.nix b/pkgs/development/java-modules/maven/plugin-registry.nix new file mode 100644 index 00000000000..baccc1aeb76 --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-registry.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenPluginRegistry_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-plugin-registry"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "14mkwxvj0rbj28df9gjnkvr20paayqdmsg0vrzcb23d3xng3zc1fy5hvkifnp7xg73qxpdz0nij56lnnj7q2dqxcnmqvh0vslhc2xja"; } + { type = "pom"; sha512 = "0c09imgd44b3pgnj1bjak7xn2z3mpwy9nhbchagfqkicras4djmn2dqwpm1z6p1d4khwx830x9grjrw45przan8lgc7wxzkalnnaqkf"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/profile.nix b/pkgs/development/java-modules/maven/profile.nix new file mode 100644 index 00000000000..674f35a2ef9 --- /dev/null +++ b/pkgs/development/java-modules/maven/profile.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenProfile_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-profile"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2v315cv62k3lmi23msk5rj9bijsafcajw7053jdzzk4zv03vdpdndm5cr995azrpdcvkcdq2m8zh5pdf44nzcdf2rvpm4nxdc2wr5rl"; } + { type = "pom"; sha512 = "05iif04frjgbmg7zb3jygn9av2ja48vs2z35b2zrlmgf3s1fxqlr4wxylrrmmk8r0hvg4qmg5j0inm414n0v4ipn08hrpzik5nhdfgy"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix new file mode 100644 index 00000000000..0d88850fb5d --- /dev/null +++ b/pkgs/development/java-modules/maven/project.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenProject_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-project"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0laxsz9z48zvx27m395djfl9121jkr7amiv8n07z9nkz9i60wjl52bb7cw6hp6090ba098g8azqpnz8l5i0yj255phy1j6s92ci1i7c"; } + { type = "pom"; sha512 = "047a0a2bd5fkmg70gzhdiwiwq5dmr84pz6jq9yi5fz44y57ndp7nb72fnkr0p0qcwmry3gj03hk9p2xr4ph53bl1x68j22fnv0f9krq"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/reporting-api.nix b/pkgs/development/java-modules/maven/reporting-api.nix new file mode 100644 index 00000000000..ea808848911 --- /dev/null +++ b/pkgs/development/java-modules/maven/reporting-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenReportingApi_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-reporting-api"; + package = "/org/apache/maven/reporting"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0x7j7k3xbxps80swyp4ff1sw4rwrhlxsx80kyh0sj0i9jz50x18p1rba10gx2fqd4l29zri77nlm4qza5yrf61s68xby2zr2bygyc9r"; } + { type = "pom"; sha512 = "054v1p9h0141pahs52pg8wb0x4jghm5222yns6mf4dbc9gpy7x9j2b0z2lv9q3slx98378s4zakx4kbk5ca9ldlm8sz9y10fpqm35s6"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/repository-metadata.nix b/pkgs/development/java-modules/maven/repository-metadata.nix new file mode 100644 index 00000000000..125788c54f9 --- /dev/null +++ b/pkgs/development/java-modules/maven/repository-metadata.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenRepositoryMetadata_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-repository-metadata"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2np435shcca1jka1gdjxs4bzzayfnfzncpnxhlfy59b32vfpvf5v0kca0zgyx7251ghhb2ks2xxd798rbzvr0gzivicwdrnd5x8g0hm"; } + { type = "pom"; sha512 = "27b9z80qdkn7p4fs6k87a5i926c3dsr6jmq4rz8dyiml1svqsvvghzz59cby6n8wkx7wn003wk28jzc08x53vbk5zsvcg9ckslxhjyw"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/settings.nix b/pkgs/development/java-modules/maven/settings.nix new file mode 100644 index 00000000000..73d707144bd --- /dev/null +++ b/pkgs/development/java-modules/maven/settings.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSettings_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-settings"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1hy1wz2bb7f9y0rr5961zhalpbwmk0fhw49k0l527w897lz4zw7lnb8xnx530s6hmn58zqj7iwkx4spz2fahps4ss1ryk0601rzgv4a"; } + { type = "pom"; sha512 = "3i2nq3r6piwhv265jhsj9hqriw6113vkqllx5s4kd4y2dspjxh6l9xprrw347nkw68904dyq9hdx76fx2nzjd16ldh41pim5lw8r15n"; } + ]; +} diff --git a/pkgs/development/java-modules/mavenPlugins.nix b/pkgs/development/java-modules/mavenPlugins.nix new file mode 100644 index 00000000000..17d4c86ba99 --- /dev/null +++ b/pkgs/development/java-modules/mavenPlugins.nix @@ -0,0 +1,113 @@ +{ pkgs, stdenv, lib, maven, fetchurl }: + +with pkgs.javaPackages; + +let + mavenbuild = pkgs.callPackage ./build-maven-package.nix { }; + fetchMaven = pkgs.callPackage ./m2install.nix { }; + poms = import ./poms.nix { inherit fetchMaven; }; +in rec { + inherit mavenbuild fetchMaven poms; + + # Standard plugins used by pretty much every Maven build + mavenDefault = lib.flatten [ aetherUtil_0_9_0_M2 bsh_2_0_b4 classworlds_1_1 commonsCli_1_0 commonsLang_2_3 mavenArtifact_2_0_9 mavenArtifact_3_0_3 mavenArtifactManager_2_0_9 mavenClean_2_5 mavenCommonArtifactFilters_1_4 mavenCompiler_3_1 mavenCore_2_0_9 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcer_1_3_1 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenErrorDiagnostics_2_0_9 mavenInstall_2_4 mavenJar_2_4 mavenModel_2_0_9 mavenModel_3_0_3 mavenMonitor_2_0_9 mavenPluginApi_2_0_6 mavenPluginApi_2_0_9 mavenPluginApi_3_0_3 mavenPluginDescriptor_2_0_9 mavenPluginParameterDocumenter_2_0_9 mavenPluginRegistry_2_0_9 mavenProfile_2_0_9 mavenProject_2_0_9 mavenReplacer_1_5_3 mavenReportingApi_2_0_9 mavenRepositoryMetadata_2_0_9 mavenResources_2_6 mavenSettings_2_0_9 mavenSurefire_2_17 plexusComponentAnnotations_1_5_5 plexusContainerDefault_1_0_alpha9_stable1 plexusI18n_1_0_beta6 plexusInteractivityApi_1_0_alpha4 plexusUtils_1_5_8 plexusUtils_2_0_6 plexusUtils_3_0 ] ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 apache_10 apache_11 apache_13 apache_3 apache_4 apache_6 beanshell_2_0_b4 codehausParent_4 doxia_1_0_alpha10 doxia_1_0 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_6 maven_2_0_9 maven_3_0_3 mavenParent_15 mavenParent_21 mavenParent_22 mavenParent_23 mavenParent_5 mavenParent_6 mavenParent_8 mavenPlugins_22 mavenPlugins_23 mavenPlugins_24 mavenReporting_2_0_9 mavenSharedComponents_17 mavenSharedComponents_19 mojoParent_32 plexus_1_0_4 plexus_2_0_2 plexus_2_0_7 plexusComponents_1_1_4 plexusContainers_1_0_3 plexusContainers_1_5_5 sonatypeForgeParent_5 sonatypeParent_7 sonatypeSpiceParent_16 surefire_2_17 ]); + + animalSniffer_1_11 = map (obj: fetchMaven { + version = "1.11"; + baseName = "animal-sniffer-maven-plugin"; + package = "/org/codehaus/mojo"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "224y5klr8pmm4g3k1qcqrbsjdng1nc9rfzlrk5x50q3d8pn0pj7jr1wg58997m217qimx4pwgcdbgl9niaw0xg136p76kd4hschbxda"; } + { type = "jar"; sha512 = "24dih4wp7p1rddvxcznlz42yxhqlln5ljdbvwnp75rsyf3ng25zv881ixk5qx8canr1lxx4kh22kwkaahz3qnw54fqn7w5z58m5768n"; } + ]; + + mavenClean_2_5 = map (obj: fetchMaven rec { + version = "2.5"; + baseName = "maven-clean-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1dc1jd65pz1wl0hr89a8v4g8kd2hcixcdlpa102ffm03mmddc1862whbj9hppx3i3297rahrwl81cph3cdc866fbhbgaj7wld2649n7"; } + { type = "jar"; sha512 = "2fprppwpmzyvaynadm6slk382khlpf5s8sbi5x249qcaw2vkg5n77q79lgq981v9kjlr5wighjzpjqv8gdig45m2p37mcfwsy3jsv89"; } + ]; + + mavenCompiler_3_1 = map (obj: fetchMaven rec { + version = "3.1"; + baseName = "maven-compiler-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1dqav3mb4ppg9l10qw04galjmf7yhlyzdna5ldpp3pmpsqglb8m2ab1q324ansz29dbp014w9c7na703jk7qzrja1ilxj0w71rpmsd5"; } + { type = "jar"; sha512 = "1dvq13yc8yacxr66pkvwwd4cvx0jln8dv9fh5gmd5vir05h8l5j4y324r1bklnzpx0ancs5ad8z944zgmpaq3w195kfsarmndp0gv2y"; } + ]; + + mavenEnforcer_1_3_1 = map (obj: fetchMaven rec { + version = "1.3.1"; + baseName = "maven-enforcer-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "0w47gx4ksksnl9siq954g2zvx8gx0qa6q5kp91qyyk88c65mfqjjm19613h3dhfmjq9f4rl8b1qhrq35gy7l90aplnibcimrpm6w6nk"; } + { type = "jar"; sha512 = "15sb9qmxgbq82nzc9x66152va121vf33nn0ah2g4z169cv6jnjq05gk1472k59imypvwsh9hd3hqi9q6g8d0sawgk5l1ax900cx7n25"; } + ]; + + mavenInstall_2_4 = map (obj: fetchMaven rec { + version = "2.4"; + baseName = "maven-install-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1s5isapjz7mp9cl0jvk8nd1amrasdk257zbil76yabd1h89q4504y01482lxh7sp7x4mcqzj00i6517qcfdzf6w99cnd8dxwgkwqq06"; } + { type = "jar"; sha512 = "35hbj5hbz085y1dxfmza6m207kn68q2g1k5a9mc75i9pj8fww7xm7xzcdv81xyxjm3r4qbqf1izlg16l99b93rfii9rg8kqz8mxqmb6"; } + ]; + + mavenJar_2_4 = map (obj: fetchMaven rec { + version = "2.4"; + baseName = "maven-jar-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "12pj3lg7gf0c9hisasrks27b3a0ibvmlbgwbx7p1dcp0as40xwffrx57am7xpqv5bzwl5plh7xxd7s14yyvk8dybjhlj7shqmgn973r"; } + { type = "jar"; sha512 = "0frbikq8jm5pynlmv51k349kiaipd9jsrh6970313s0g6n4i0ws9vi232wc1mjrc3d27k63xqmb97jzgbbc6q337ypv5vil1ql9wh0d"; } + ]; + + mavenReplacer_1_5_3 = map (obj: fetchMaven rec { + version = "1.5.3"; + baseName = "replacer"; + package = "/com/google/code/maven-replacer-plugin"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "08vz72v426hd8bzpz2wd003r4kz7rn5syva5picppgwdj69q8xm4dj78mx39ywsgzv2x8jd3w3jpc23pgr07dqj5h2kyj44147lkhsp"; } + { type = "jar"; sha512 = "0f2rngcxpll0iigv115132fld5n6shjfn7m981sg7mdzlj75q2h5knd4x1ip33w60cm1j0rmqaxp1y6qn76ykvhprdyy9smiy667l9x"; } + ]; + + mavenResources_2_6 = map (obj: fetchMaven rec { + version = "2.6"; + baseName = "maven-resources-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3rki0dhs3y7w9vbvwf2i7hmq9vismcfq79cdzd3qfs9bva4qxikx939idg8jmwnwaqww4q3wmgwg5vx3n910m8m2xr83x6y0dm62vbk"; } + { type = "jar"; sha512 = "3j8smsx6wk085iic5qhknrszixxna6szmvk2rn9zkn75ffjr7ham72hw9cmxf5160j73n8f2cmcbw1x462fqy12fqqpmzx08i1sbwcv"; } + ]; + + mavenSurefire_2_17 = map (obj: fetchMaven rec { + version = "2.17"; + baseName = "maven-surefire-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "367j67yy8jyq0k7ycnf9ixjy0rl2xb7cz0hwvh9rcbxkbr687bwam2gss0zdsr44q2ndk5hlcq56hhngp055194p90hkcvgr343ng6y"; } + { type = "jar"; sha512 = "3vhs3djga2ni3bsldn7jml8ya3vgvqaakiybj9y77q8z35xcnf34hsxkmlpm6mbyl5afcv2ij6syas0zppshqbp64ibx7bsqnfi0zbl"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/component-annotations.nix b/pkgs/development/java-modules/plexus/component-annotations.nix new file mode 100644 index 00000000000..949238001be --- /dev/null +++ b/pkgs/development/java-modules/plexus/component-annotations.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusComponentAnnotations_1_5_5 = map (obj: fetchMaven { + version = "1.5.5"; + baseName = "plexus-component-annotations"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2r0dzjs65hzllvm7kizis0lmx4sp3967c1918181y0isnlp1fsxg8sakb2qnfn748xnnxgh7h5fk04az999isd8qs1p85cgi2waz91f"; } + { type = "pom"; sha512 = "1yx9dl3mq8wx3w4ksq0z1x84kry1l1agdg3ssnbjwxlh96hjxki88j89iyfwbwwia40113b62r8168s0lhgzca3w7kbdii3kldgbz6y"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/container-default.nix b/pkgs/development/java-modules/plexus/container-default.nix new file mode 100644 index 00000000000..a720c06a186 --- /dev/null +++ b/pkgs/development/java-modules/plexus/container-default.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusContainerDefault_1_0_alpha9_stable1 = map (obj: fetchMaven { + version = "1.0-alpha-9-stable-1"; + baseName = "plexus-container-default"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1dpzdijx7xb3kgv2ybias3shzvpsq82w6x1ig5gdkg0i47m6a1ld53bi3gjczdpn88xparp80jkqlacjb65764v05ps6zg0v3vr1dkw"; } + { type = "pom"; sha512 = "1gnm9ivwrkr3aqpnmdl34hkx53189wxj9acp2fms8inhznrxqcyyk355gpgzwvs9qpgdis1q88mj1fy3x1v3ffa3b6wi758p95q79jc"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/i18n.nix b/pkgs/development/java-modules/plexus/i18n.nix new file mode 100644 index 00000000000..7af0cd17de8 --- /dev/null +++ b/pkgs/development/java-modules/plexus/i18n.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusI18n_1_0_beta6 = map (obj: fetchMaven { + version = "1.0-beta-6"; + baseName = "plexus-i18n"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "28j0h3qd2xpddcs9wxr30235a8l1jlqwj7mhbvdhqcn8ck2bbp7dx1bl9p8mzl1v6lgzqi12ga6lccs2axadmz0w7fscvzmfh2v8mvk"; } + { type = "pom"; sha512 = "1zv1v86vqzmk03mvl1i74wqk5s2b0wgr6qksdnjp7msmm8k27ilbgsdf9nf9wfc84s4kw4xwwkg954x192klwmv16kslc6xqjbxl2gk"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/interactivity-api.nix b/pkgs/development/java-modules/plexus/interactivity-api.nix new file mode 100644 index 00000000000..9d62aec70f4 --- /dev/null +++ b/pkgs/development/java-modules/plexus/interactivity-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusInteractivityApi_1_0_alpha4 = map (obj: fetchMaven { + version = "1.0-alpha-4"; + baseName = "plexus-interactivity-api"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2zy33hz2g0mgb2ryjbgjrf55bmmglkbsmh03wx29d4cwgcd83i1wb211c1wxdnnf7a8cx6ryfhx1fxwq379m4793apa9aix8px5sqj2"; } + { type = "pom"; sha512 = "27890lj546q9rapgzks8dkdc5d2lbsr1rgbhl9vxkr7hpqci0m2q6g7zpl94vk50hx4bb52p24j0x6dqsyd6ijnadbi1dysfnb6jm6f"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix new file mode 100644 index 00000000000..672a43455c9 --- /dev/null +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -0,0 +1,47 @@ +{ fetchMaven }: + +rec { + plexusUtils_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "36k6grn4as4ka3diizwvybcfsn4spqqmqxvsaf66iq1zi2vxj3rsfr4xq6isv3p8f09wnnv9jm9xqqz4z0n3ah5mi8z1p5zhskcm5fs"; } + { type = "pom"; sha512 = "0vbzdfsdcc4cq7hdqzb1vdfxp23vnavq7z4qmmlb4d4fiqj5wqdgagrs43gl7yzca2azpyj3kyxgaipimi7gck07jcsz0pzljkplk4w"; } + ]; + + plexusUtils_1_5_8 = map (obj: fetchMaven { + version = "1.5.8"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0nx0l29lmphylkmnacwj6n1spdxxaqn1jr5vg4pcil9y2p08bzyn715bhwgazg3sa94ynzi38lsmf60y00prv3cy2zgj0smg5psq3z5"; } + { type = "pom"; sha512 = "06z4gkq3bh2pwyj8pvaly9fihd8gbgcqp3jxl05vkj2rcdb4jw3lw3hwn8f8ggqi17i2fdm8cbndkqgr9vdgiz45p8f1nx8kjlqikbi"; } + ]; + + plexusUtils_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3n0g1xhjkjm0m3ch5wm34vxvldw889p401rlwqrlzm6nh53h36plq955v2vv30gjdgp7n54lpr4pb374fxz6wbzj385kphmsgxbsaxc"; } + { type = "pom"; sha512 = "22g2dlbgc557k126hd0nfaf6n76vwa19nnd0ga8ywdx5pnai63x9806d7dhvjm778rmgpxlrj65y8if36q0zkbg153i007cxg36indj"; } + ]; + + plexusUtils_3_0 = map (obj: fetchMaven { + version = "3.0"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "16m1khf9fafb9f79rbz93qgc35d8605v1qbs4ywnj4sk00d00d6n1649cc9rv593r8ghwd0rkz345z7wb00fagdr9af5h8h5w5blsa1"; } + { type = "pom"; sha512 = "123fsmm1jvy571yl1s3wp7yd5k52nfjqxzqpzx2940rsigm35rw2mx1g4bvr3wx0gv5bqlfmqj5cwdhhxdq5vzrax8z5vbmdg5vb77r"; } + ]; +} diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix new file mode 100644 index 00000000000..39dc9528140 --- /dev/null +++ b/pkgs/development/java-modules/poms.nix @@ -0,0 +1,331 @@ +{ fetchMaven }: + +rec { + aether_0_9_0_M2 = fetchMaven { + version = "0.9.0.M2"; + baseName = "aether"; + package = "/org/eclipse/aether"; + sha512 = "0ampl2jkkc1f5cbigmi1b5nnxhb9qqzz0nyfb5a2vzbw3ri7ry8dj6xgjznlpxib46zxgaxcsvhxq2yx6a9i8chnzvgghccwpl808yi"; + type = "pom"; + }; + + animalSnifferParent_1_11 = fetchMaven { + version = "1.11"; + baseName = "animal-sniffer-parent"; + package = "/org/codehaus/mojo"; + sha512 = "3w9l3b4qxzmlwmaqppn1d794ycqf5piilv44fc74jccbgahdsq1as8dvyknnj2610yklwxx3146s7f0c3ms8y93alv02wybjwk5fd07"; + type = "pom"; + }; + + apache_3 = fetchMaven { + version = "3"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "3vvqxycj7zxa9dfxa6f8i2azdvxc7ci68fk3nlkjvhsglmwr39wf6cwgj6qqlrw3mabzs714lgz0wdacsidncadxzfw774ck20dq1rf"; + type = "pom"; + }; + + apache_4 = fetchMaven { + version = "4"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; + type = "pom"; + }; + + apache_6 = fetchMaven { + version = "6"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "2nvwk7fhiqcbr4vrwl0d3g4wz25vll24ga9kyc89fzq6b9nr6bqfphrm5a73kdih97l5cqlszw8xc847viw2ss1mwabn590f01ykhj0"; + type = "pom"; + }; + + apache_10 = fetchMaven { + version = "10"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "0kmva6f2q5rq7rk9ljwn3rxa4w2j7sjkxsmvambzqpj61cagdnq4vj9jk0xxx8448kqckdh5w2xkr5lr33sgfl67jy9l5h2s6h13v6m"; + type = "pom"; + }; + + apache_11 = fetchMaven { + version = "11"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "09v6sghdaxinrk3pnpnc36x24z62gqn65v25q83mc0q6n49l0xir55xk21qzc8kc6hrdr9khnr7jxkqz207cyv6wky6sy7c3pqg0na0"; + type = "pom"; + }; + + apache_13 = fetchMaven { + version = "13"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "0sf86l1457wwp8czg32xhh96l5nlw8v84lbi59nfdxxzcrsn8b1ysgwda3r1ck0d86c5gjmh3qg7kbwlrspwa71w9zn9sby3bszj99v"; + type = "pom"; + }; + + beanshell_2_0_b4 = fetchMaven { + version = "2.0b4"; + baseName = "beanshell"; + package = "/org/beanshell"; + sha512 = "2xwgqmfwli40lvlgjx00ki5zm1290jhjvqg7wnq869kxkw9iam239zxb0jz46jcpbgy10qg6sd86cjw5g38njywcz33501f6byd0n3w"; + type = "pom"; + }; + + codehausParent_4 = fetchMaven { + version = "4"; + baseName = "codehaus-parent"; + package = "/org/codehaus"; + sha512 = "11dacs4155xc3rn3crdayg1yp15abw81lbk6qwi7207009rnyk1kxvs56am9pllkybgja53ri0k084k2ppp4dlhxrg6w3zccbafxlgp"; + type = "pom"; + }; + + doxia_1_0_alpha10 = fetchMaven { + version = "1.0-alpha-10"; + baseName = "doxia"; + package = "/org/apache/maven/doxia"; + sha512 = "3by91czdkjn4myc6xwzap37ydmhvic4myr8p2zflnpawrph00jkz9pivd84k2qykvmc5gxzbmklf1inwvkq1f5bsyhh440mlvsfsn1s"; + type = "pom"; + }; + + doxia_1_0 = fetchMaven { + version = "1.0"; + baseName = "doxia"; + package = "/org/apache/maven/doxia"; + sha512 = "3z04h87dwn5panpr68ajzflw5n4wgi98isl5snz6vrd2vz9744fdqggmn6698wljw9h4pzkvjyrxf9b7w4km6w7kma28akvn951vw99"; + type = "pom"; + }; + + enforcer_1_3_1 = fetchMaven { + version = "1.3.1"; + baseName = "enforcer"; + package = "/org/apache/maven/enforcer"; + sha512 = "1m84z5x2gxlbj9bl2jrfzh26pl7nz1d79sv72clp565z4lr2r1abih2c7aigbd95zik948dqrbh2vzm7vp1iv0d23vk89rx4nmfg0rv"; + type = "pom"; + }; + + hamcrestParent_1_3 = fetchMaven { + version = "1.3"; + baseName = "hamcrest-parent"; + package = "/org/hamcrest"; + sha512 = "1da3ivp9n1h3hl35vhgd7avi4xh8p0802qj7xrk93gbz01s2av28p6ycdwiwp7kja0151wm5jvbgpnkxd8azqwkh7dh83w22k7jpwh3"; + type = "pom"; + }; + + maven_2_0_6 = fetchMaven { + version = "2.0.6"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "2k58pvcrdc52zsq6id4vl8a45srxllm2m49namqkzix4356haphk3i06px9jcc2cmkqw7bcpqh5xvvmkds5vhp2b9y9b0i2lcfgx8jw"; + type = "pom"; + }; + + maven_2_0_9 = fetchMaven { + version = "2.0.9"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "2b3wfqxbg0v2lm82a7nzw8wzw708isfrnzriy90bk89dhnj59qzpgvwrjbhs26a32gnpii5ivivh1msq51k1b7j5knmyf0hi1v0blw0"; + type = "pom"; + }; + + maven_3_0_3 = fetchMaven { + version = "3.0.3"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "397qqkh9qd2aj346v4nvxrhaqz6k75l5xnm1xcqd0d4mmxg0p7jlz54yzkshqli2w5df9f7p8pavpkiw5xkl8ipxmp87vfcanvkx4x4"; + type = "pom"; + }; + + mavenParent_5 = fetchMaven { + version = "5"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "1810h5ziij9awpf2c6sgqlwd93dd3c54rxbnjxar97idw2zkmwqfxvxi74qjcpbqqam3ypxb893k3958jmhbrzmwhwbkhxyyiqgjsx0"; + type = "pom"; + }; + + mavenParent_6 = fetchMaven { + version = "6"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "2z9rkv875yx64mpbf1mgyb3hcxqbhr0ndczwqlmkgd05a679d4vyi92fndaz1bcfwc5bmmxf4s6zrg58swv05j2j9d6vqd2b0x385dq"; + type = "pom"; + }; + + mavenParent_8 = fetchMaven { + version = "8"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; + type = "pom"; + }; + + mavenParent_15 = fetchMaven { + version = "15"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "390z5v0nygsw075fa5jzl5baxb0bripiiy6arqk550zlg8dw8mcg6cyscwnh3zw4gxyr1qbcy0v8wsj375xc65i2agkzg1qbv5z6xxp"; + type = "pom"; + }; + + mavenParent_21 = fetchMaven { + version = "21"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "2dph51qjkmh9sixd12rgxhrvl3w5r7nmr4n3ra4y1lifml6h0md0indj3qw4lxm0db811p3hxf2f9l0gf6w4q5ypjp20lk9ia2xm5s0"; + type = "pom"; + }; + + mavenParent_22 = fetchMaven { + version = "22"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "112xv5inpan05vkm12g2lpz37pgga1nm8rar2bqhibvwljg4yv1myx8z99g0nkd3gzbgw5098aagm006w6bnmwsibwd1js8is5d4r88"; + type = "pom"; + }; + + mavenParent_23 = fetchMaven { + version = "23"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "3c6ydqi3sf5aq3aj42kxgrjpcf8wpl0rf6hmr6vkas04w0h4dyvjb78ipyxsqzqgzjm6cmdfhxzx8hjb2lwvy3ipf1x39j6cj7dwdy8"; + type = "pom"; + }; + + mavenPlugins_22 = fetchMaven { + version = "22"; + baseName = "maven-plugins"; + package = "/org/apache/maven/plugins"; + sha512 = "14xy4s69dvqllkspc5b8q1gdbi0wn494ghwcdfcvjzvgczjhhxbr1h698amv3zmg59gb7liz77ws4vmcar8j9lazywcv13cy1myiywa"; + type = "pom"; + }; + + mavenPlugins_23 = fetchMaven { + version = "23"; + baseName = "maven-plugins"; + package = "/org/apache/maven/plugins"; + sha512 = "1vh7izahb4sskja66hqrygv1r8iwpl97kp65yx6z3fnm761brag89fdcl4jl9hypvm57alf283gvq9rsy5kqnqcdki20k5vw26y1b1a"; + type = "pom"; + }; + + mavenPlugins_24 = fetchMaven { + version = "24"; + baseName = "maven-plugins"; + package = "/org/apache/maven/plugins"; + sha512 = "07flf37pkkc34466bnzi4rfwdlgvd3ydasm39qzy2hybxv26306zrhipglmgsjvd84z07dscij4n7qdd2jkx9hrkm900hid4xwvxzrs"; + type = "pom"; + }; + + mavenReporting_2_0_9 = fetchMaven { + version = "2.0.9"; + baseName = "maven-reporting"; + package = "/org/apache/maven/reporting"; + sha512 = "0cg49pq6rvk7c84xwnpq2p47b7y973sy9qfgzcq06bnrqm6cj26h8k7d9kpp3q3rd2hlw10db4sjfx0crlai27cbbz41i5m22lq21s5"; + type = "pom"; + }; + + mavenSharedComponents_17 = fetchMaven { + version = "17"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "3f2pifiapx09h3wv9lglm0mkd9gid268lfz27jhqb4ck2yxna31872db7cj5c9lsg0pl2l3bwgp526whq14zj2qffqxrdq8mn9m0rhy"; + type = "pom"; + }; + + mavenSharedComponents_19 = fetchMaven { + version = "19"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "1na6rh2mlwq6yrg7jxxnkcjj4ki0lqcihwiq2cy2ygsd6q0z8fn755frrd1j1jvd5dnh8jxjqp1m5mpwwv13hxhy8lmq95a5pp2a2qh"; + type = "pom"; + }; + + mojoParent_32 = fetchMaven { + version = "32"; + baseName = "mojo-parent"; + package = "/org/codehaus/mojo"; + sha512 = "15pzaqpdcr8c2w2b2ms3qc5d3r0flmzqav6h45nmg1l8nv7529lp6dkilhkwqag1i94vh8dvqnkxm475j9v2hxmz981azrvz7984z8w"; + type = "pom"; + }; + + plexus_1_0_4 = fetchMaven { + version = "1.0.4"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "22zsqss9aws73zvgqaz1brnvhk8bqn0flzd644nikprbb9dh1jyv1jig7xaxj942wq1w8h6ybx6b3v1ysfr8kw1z70sb5yrb4zd4kkm"; + type = "pom"; + }; + + plexus_2_0_2 = fetchMaven { + version = "2.0.2"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "095kxnh9238wlnxsbsl7wj3zsp2ijwx8p8bvbmsvj3iacw9fsvddv263j485zfjf4ipvp5dwqc3sc8mqkwbhx1qj7k1x1hj14nl6r8z"; + type = "pom"; + }; + + plexus_2_0_7 = fetchMaven { + version = "2.0.7"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "2ddbjp60y8g7n56hya5qa59f980a8sdj0d1dicv3na3pbc6k4wgdrix78lgg32sp4fzmxl7fyzw9gy3z2vpzf65zkj3c9yh030jcysr"; + type = "pom"; + }; + + plexusComponents_1_1_4 = fetchMaven { + version = "1.1.4"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "02kdl9z8nz26h4qf9mrdm8s1y2gy1f57n825yy0y3qifavlv51k2yxza7mjsdl1dwrq84c4qlj79iqlisnhrppfy0ncbbblnbir1yln"; + type = "pom"; + }; + + plexusContainers_1_0_3 = fetchMaven { + version = "1.0.3"; + baseName = "plexus-containers"; + package = "/org/codehaus/plexus"; + sha512 = "39sw2lxlrgbj1zlf67qz14j53sxd45p1qmna5cfizqikrwiqrnb6xwdxr2rsp3h2kadwwpz6id2ls6x3hr93znkad404rg4lg11v9nj"; + type = "pom"; + }; + + plexusContainers_1_5_5 = fetchMaven { + version = "1.5.5"; + baseName = "plexus-containers"; + package = "/org/codehaus/plexus"; + sha512 = "1dzg3ry73scisq02p1c96rn04rvdpyf9v6cbvvmy6hvcaw11y8mmjwjnlayljhr9za5hhq5bwv2vssmp683v3qjr5750f9aa62jxw0w"; + type = "pom"; + }; + + sonatypeForgeParent_5 = fetchMaven { + version = "5"; + baseName = "forge-parent"; + package = "/org/sonatype/forge"; + sha512 = "1l3nll0i5cpf2rh5f4gqriwy2737n9sccr605nx1swn1qafbxbvvs4jl7argdzz0mkzrr8sir7vnksm9a273vrdica9l35nxivm6vrx"; + type = "pom"; + }; + + sonatypeParent_7 = fetchMaven { + version = "7"; + baseName = "oss-parent"; + package = "/org/sonatype/oss"; + sha512 = "3xk0q7y2kdarr3l42dqjzq9qz1r840abqw9zhvl4gpc8jw5xcbqd781fp8z41i3hrkyaf740f2kppji9l77ci7f759d5s9yg4grbc33"; + type = "pom"; + }; + + sonatypeSpiceParent_16 = fetchMaven { + version = "16"; + baseName = "spice-parent"; + package = "/org/sonatype/spice"; + sha512 = "0awfi8vf4xc5c9510sas7xqlik4g8ljivay372cksvlcwlgyrgliikak0xxbxj72df5b9jzc9fzvjxd9rlllnnlnm4zllw5p2hakb0g"; + type = "pom"; + }; + + surefire_2_17 = fetchMaven { + version = "2.17"; + baseName = "surefire"; + package = "/org/apache/maven/surefire"; + sha512 = "3yraw37xwayyrvwa62y6li3wbzrha08j389psz16j1dawxmg78zlm2x1jmgz3nzdb60n9kk143606bgs3vrf7ri9d5pwkg9lvw7hk92"; + type = "pom"; + }; +} diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix new file mode 100644 index 00000000000..760dd01e732 --- /dev/null +++ b/pkgs/top-level/java-packages.nix @@ -0,0 +1,113 @@ +{ pkgs, stdenv, maven }: + +with pkgs; + +let + mavenbuild = callPackage ../development/java-modules/build-maven-package.nix { }; + fetchMaven = callPackage ../development/java-modules/m2install.nix { }; +in { + inherit mavenbuild fetchMaven; + + mavenPlugins = recurseIntoAttrs (callPackage ../development/java-modules/mavenPlugins.nix { }); + + inherit (callPackage ../development/java-modules/eclipse/aether-util.nix { inherit fetchMaven; }) + aetherUtil_0_9_0_M2; + + inherit (callPackage ../development/java-modules/beanshell/bsh.nix { inherit fetchMaven; }) + bsh_2_0_b4; + + inherit (callPackage ../development/java-modules/classworlds/classworlds.nix { inherit fetchMaven; }) + classworlds_1_1; + + inherit (callPackage ../development/java-modules/apache/commons-cli.nix { inherit fetchMaven; }) + commonsCli_1_0; + + inherit (callPackage ../development/java-modules/apache/commons-lang.nix { inherit fetchMaven; }) + commonsLang_2_3; + + inherit (callPackage ../development/java-modules/hamcrest/core.nix { inherit fetchMaven; }) + hamcrestCore_1_3; + + inherit (callPackage ../development/java-modules/junit { inherit mavenbuild; }) + junit_4_12; + + inherit (callPackage ../development/java-modules/maven/artifact.nix { inherit fetchMaven; }) + mavenArtifact_2_0_9 + mavenArtifact_3_0_3; + + inherit (callPackage ../development/java-modules/maven/artifact-manager.nix { inherit fetchMaven; }) + mavenArtifactManager_2_0_9; + + inherit (callPackage ../development/java-modules/maven/common-artifact-filters.nix { inherit fetchMaven; }) + mavenCommonArtifactFilters_1_4; + + inherit (callPackage ../development/java-modules/maven/core.nix { inherit fetchMaven; }) + mavenCore_2_0_9; + + inherit (callPackage ../development/java-modules/maven/dependency-tree.nix { inherit fetchMaven; }) + mavenDependencyTree_2_1; + + inherit (callPackage ../development/java-modules/maven/doxia-sink-api.nix { inherit fetchMaven; }) + mavenDoxiaSinkApi_1_0_alpha10; + + inherit (callPackage ../development/java-modules/maven/enforcer.nix { inherit fetchMaven; }) + mavenEnforcerApi_1_3_1 + mavenEnforcerRules_1_3_1; + + inherit (callPackage ../development/java-modules/maven/error-diagnostics.nix { inherit fetchMaven; }) + mavenErrorDiagnostics_2_0_9; + + inherit (callPackage ../development/java-modules/maven/model.nix { inherit fetchMaven; }) + mavenModel_2_0_9 + mavenModel_3_0_3; + + inherit (callPackage ../development/java-modules/maven/monitor.nix { inherit fetchMaven; }) + mavenMonitor_2_0_9; + + inherit (callPackage ../development/java-modules/maven/plugin-api.nix { inherit fetchMaven; }) + mavenPluginApi_2_0_6 + mavenPluginApi_2_0_9 + mavenPluginApi_3_0_3; + + inherit (callPackage ../development/java-modules/maven/plugin-descriptor.nix { inherit fetchMaven; }) + mavenPluginDescriptor_2_0_9; + + inherit (callPackage ../development/java-modules/maven/plugin-parameter-documenter.nix { inherit fetchMaven; }) + mavenPluginParameterDocumenter_2_0_9; + + inherit (callPackage ../development/java-modules/maven/plugin-registry.nix { inherit fetchMaven; }) + mavenPluginRegistry_2_0_9; + + inherit (callPackage ../development/java-modules/maven/profile.nix { inherit fetchMaven; }) + mavenProfile_2_0_9; + + inherit (callPackage ../development/java-modules/maven/project.nix { inherit fetchMaven; }) + mavenProject_2_0_9; + + inherit (callPackage ../development/java-modules/maven/reporting-api.nix { inherit fetchMaven; }) + mavenReportingApi_2_0_9; + + inherit (callPackage ../development/java-modules/maven/repository-metadata.nix { inherit fetchMaven; }) + mavenRepositoryMetadata_2_0_9; + + inherit (callPackage ../development/java-modules/maven/settings.nix { inherit fetchMaven; }) + mavenSettings_2_0_9; + + inherit (callPackage ../development/java-modules/plexus/component-annotations.nix { inherit fetchMaven; }) + plexusComponentAnnotations_1_5_5; + + inherit (callPackage ../development/java-modules/plexus/container-default.nix { inherit fetchMaven; }) + plexusContainerDefault_1_0_alpha9_stable1; + + inherit (callPackage ../development/java-modules/plexus/i18n.nix { inherit fetchMaven; }) + plexusI18n_1_0_beta6; + + inherit (callPackage ../development/java-modules/plexus/interactivity-api.nix { inherit fetchMaven; }) + plexusInteractivityApi_1_0_alpha4; + + inherit (callPackage ../development/java-modules/plexus/utils.nix { inherit fetchMaven; }) + plexusUtils_1_1 + plexusUtils_1_5_8 + plexusUtils_2_0_6 + plexusUtils_3_0; +} From 38e762c6d1f145cf5a2eecec17f1db0c27ddc3a4 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Mon, 31 Oct 2016 09:38:28 -0400 Subject: [PATCH 003/216] Partial maven-hello --- .../java-modules/build-maven-package.nix | 4 +- .../java-modules/findbugs/jsr305.nix | 15 ++ .../java-modules/junit/default.nix | 15 +- .../java-modules/maven-hello/default.nix | 33 ++++ .../java-modules/maven/archiver.nix | 14 ++ .../java-modules/maven/artifact-manager.nix | 22 +++ .../java-modules/maven/artifact.nix | 11 ++ .../maven/common-artifact-filters.nix | 11 ++ pkgs/development/java-modules/maven/core.nix | 22 +++ .../java-modules/maven/doxia-sink-api.nix | 11 ++ .../java-modules/maven/error-diagnostics.nix | 22 +++ .../java-modules/maven/filtering.nix | 14 ++ pkgs/development/java-modules/maven/model.nix | 22 +++ .../java-modules/maven/monitor.nix | 22 +++ .../java-modules/maven/plugin-annotations.nix | 14 ++ .../java-modules/maven/plugin-api.nix | 11 ++ .../java-modules/maven/plugin-descriptor.nix | 22 +++ .../maven/plugin-parameter-documenter.nix | 22 +++ .../java-modules/maven/plugin-registry.nix | 22 +++ .../java-modules/maven/profile.nix | 22 +++ .../java-modules/maven/project.nix | 11 ++ .../java-modules/maven/reporting-api.nix | 11 ++ .../maven/repository-metadata.nix | 22 +++ .../java-modules/maven/settings.nix | 22 +++ .../java-modules/maven/shared-incremental.nix | 14 ++ .../java-modules/maven/shared-utils.nix | 14 ++ .../java-modules/maven/surefire-api.nix | 14 ++ .../java-modules/maven/surefire-booter.nix | 14 ++ .../java-modules/maven/surefire-common.nix | 14 ++ .../java-modules/maven/toolchain.nix | 25 +++ .../development/java-modules/mavenPlugins.nix | 141 ++++++++++++++- .../java-modules/plexus/build-api.nix | 14 ++ .../java-modules/plexus/compiler-api.nix | 14 ++ .../java-modules/plexus/interpolation.nix | 14 ++ .../development/java-modules/plexus/utils.nix | 22 +++ pkgs/development/java-modules/poms.nix | 160 ++++++++++++++++++ pkgs/top-level/java-packages.nix | 96 +++++++++-- 37 files changed, 956 insertions(+), 17 deletions(-) create mode 100644 pkgs/development/java-modules/findbugs/jsr305.nix create mode 100644 pkgs/development/java-modules/maven-hello/default.nix create mode 100644 pkgs/development/java-modules/maven/archiver.nix create mode 100644 pkgs/development/java-modules/maven/filtering.nix create mode 100644 pkgs/development/java-modules/maven/plugin-annotations.nix create mode 100644 pkgs/development/java-modules/maven/shared-incremental.nix create mode 100644 pkgs/development/java-modules/maven/shared-utils.nix create mode 100644 pkgs/development/java-modules/maven/surefire-api.nix create mode 100644 pkgs/development/java-modules/maven/surefire-booter.nix create mode 100644 pkgs/development/java-modules/maven/surefire-common.nix create mode 100644 pkgs/development/java-modules/maven/toolchain.nix create mode 100644 pkgs/development/java-modules/plexus/build-api.nix create mode 100644 pkgs/development/java-modules/plexus/compiler-api.nix create mode 100644 pkgs/development/java-modules/plexus/interpolation.nix diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index 182740c552d..499a48b2228 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -1,4 +1,4 @@ -{ stdenv, maven, lib }: +{ stdenv, maven, lib, pkgs }: { mavenDeps, src, name, meta, m2Path, ... }: with builtins; @@ -7,7 +7,7 @@ with lib; stdenv.mkDerivation rec { inherit mavenDeps src name meta m2Path; - flatDeps = flatten mavenDeps; + flatDeps = unique (flatten (mavenDeps ++ pkgs.javaPackages.mavenPlugins.mavenMinimal)); propagatedBuildInput = [ maven ] ++ flatDeps; diff --git a/pkgs/development/java-modules/findbugs/jsr305.nix b/pkgs/development/java-modules/findbugs/jsr305.nix new file mode 100644 index 00000000000..466ce247633 --- /dev/null +++ b/pkgs/development/java-modules/findbugs/jsr305.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + findbugsJsr305_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "jsr305"; + package = "/com/google/code/findbugs"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "33flq50603n496c90981a0gsv30pgk6cnf859vdj6c8n4iq973prq847z5q8ld64j3rdmakxy9rsp49w7pddfd0v0i9n97rkr435f5k"; } + { type = "pom"; sha512 = "2iavm6d9nmy4g2i6y7q4l68bpjpncng1qfhbxdj44l3nqi7ixcjw0y38ymial7g2z0r1kd9qydr5lawjspr0fbzpjkcln2q7gsf0hfw"; } + ]; +} + diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index 7325b07700f..ebb614bb703 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -1,4 +1,4 @@ -{ stdenv, pkgs, mavenbuild }: +{ stdenv, pkgs, mavenbuild, fetchMaven }: with pkgs.javaPackages; @@ -25,8 +25,19 @@ rec { }; }; + junit_3_8_1 = map (obj: fetchMaven { + version = "3.8.1"; + baseName = "junit"; + package = "/junit"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "2b368057s8i61il387fqvznn70r9ndm815r681fn9i5afs1qgkw7i1d6vsn3pv2bbif1kmhb7qzcc574m3xcwc8a2mqw44b4bbxsfyl"; } + { type = "jar"; sha512 = "25yk0lzwk46r867nhrw4hg7cvz28wb8ln9nw1dqrb6zarifl54p4h1mcz90vmih405bsk96g0qb6hn1h4df0fas3f5kma9vxfjryvwf"; } + ]; + junit_4_12 = junitGen { - mavenDeps = [ mavenPlugins.animalSniffer_1_11 hamcrestCore_1_3 plexusUtils_1_1 ] ++ mavenPlugins.mavenDefault; + mavenDeps = [ mavenPlugins.animalSniffer_1_11 hamcrestCore_1_3 plexusUtils_1_1 ]; sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; version = "4.12"; }; diff --git a/pkgs/development/java-modules/maven-hello/default.nix b/pkgs/development/java-modules/maven-hello/default.nix new file mode 100644 index 00000000000..feb3146ffd6 --- /dev/null +++ b/pkgs/development/java-modules/maven-hello/default.nix @@ -0,0 +1,33 @@ +{ stdenv, pkgs, mavenbuild }: + +with pkgs.javaPackages; + +rec { + mavenHelloRec = { mavenDeps, sha512, version }: mavenbuild rec { + inherit mavenDeps sha512 version; + + name = "maven-hello-${version}"; + src = pkgs.fetchFromGitHub { + inherit sha512; + owner = "NeQuissimus"; + repo = "maven-hello"; + rev = "v${version}"; + }; + m2Path = "/com/nequissimus/maven-hello/${version}"; + + meta = { + homepage = http://github.com/NeQuissimus/maven-hello/; + description = "Maven Hello World"; + license = stdenv.lib.licenses.unlicense; + platforms = stdenv.lib.platforms.all; + maintainers = with stdenv.lib.maintainers; + [ nequissimus ]; + }; + }; + + mavenHello_1_0 = mavenHelloRec { + mavenDeps = []; + sha512 = "3kv5z1i02wfb0l5x3phbsk3qb3wky05sqn4v3y4cx56slqfp9z8j76vnh8v45ydgskwl2vs9xjx6ai8991mzb5ikvl3vdgmrj1j17p2"; + version = "1.0"; + }; +} diff --git a/pkgs/development/java-modules/maven/archiver.nix b/pkgs/development/java-modules/maven/archiver.nix new file mode 100644 index 00000000000..790e7894bff --- /dev/null +++ b/pkgs/development/java-modules/maven/archiver.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenArchiver_2_5 = map (obj: fetchMaven { + version = "2.5"; + baseName = "maven-archiver"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3kkv5kf3k5in69aplawkr0cr2cviyjgf8k6r6qvgxk53i3jmh7qylzrwkrd9bxclkjkgyg77cffxm48qhxm9pyqncdbwjldsmmdfb4f"; } + { type = "pom"; sha512 = "37kvfxcpfajjn9lmvh5kay4y61ri1190hxxgiil8fqfvmvcm02jcqzfi4ry0nzc80g5fsarsd3s2ns2d8l0lnqjp28nn51dixm9a55w"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/artifact-manager.nix b/pkgs/development/java-modules/maven/artifact-manager.nix index b46fb254b17..7f0a9226e87 100644 --- a/pkgs/development/java-modules/maven/artifact-manager.nix +++ b/pkgs/development/java-modules/maven/artifact-manager.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenArtifactManager_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-artifact-manager"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1alp2iahaaf39yd3xp8817sz93nhz53flkkv5dx87vybsizpykb1g7jn6bnx0cbqqr9k5pi27z8mbkmry05vwqc6jyic1pyvzy1y3vn"; } + { type = "pom"; sha512 = "3pvj8gpcg57akalj4574k4mzw2skgm0w69bdvh0ivyd8skgdrf5gwxf57hl5rbgsdpr82m2za7yvi63fw82k7v84sib904fs639r3pf"; } + ]; + mavenArtifactManager_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-artifact-manager"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "1vvxf2dannx9p2qvlbmrxfni5mc0f3722p3bcdz6bk3z4dhb2hlw2wx17nvirq5r3k43azgp13mg0638saz7v1g23f07n9yzm979f0p"; } { type = "pom"; sha512 = "2v7371gsarjb4s2bp5vclqgdg82mh7nzy7af31g9z20q2r6ndw024xa8bpcxp227yv83lpawbhq0ysg0glnw9ql54100h9hbllam0p8"; } ]; + + mavenArtifactManager_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-artifact-manager"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1vvxf2dannx9p2qvlbmrxfni5mc0f3722p3bcdz6bk3z4dhb2hlw2wx17nvirq5r3k43azgp13mg0638saz7v1g23f07n9yzm979f0p"; } + { type = "pom"; sha512 = "2v7371gsarjb4s2bp5vclqgdg82mh7nzy7af31g9z20q2r6ndw024xa8bpcxp227yv83lpawbhq0ysg0glnw9ql54100h9hbllam0p8"; } + ]; } diff --git a/pkgs/development/java-modules/maven/artifact.nix b/pkgs/development/java-modules/maven/artifact.nix index d0b528b916a..12876f53d5a 100644 --- a/pkgs/development/java-modules/maven/artifact.nix +++ b/pkgs/development/java-modules/maven/artifact.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenArtifact_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3kkv5kf3k5in69aplawkr0cr2cviyjgf8k6r6qvgxk53i3jmh7qylzrwkrd9bxclkjkgyg77cffxm48qhxm9pyqncdbwjldsmmdfb4f"; } + { type = "pom"; sha512 = "37kvfxcpfajjn9lmvh5kay4y61ri1190hxxgiil8fqfvmvcm02jcqzfi4ry0nzc80g5fsarsd3s2ns2d8l0lnqjp28nn51dixm9a55w"; } + ]; + mavenArtifact_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-artifact"; diff --git a/pkgs/development/java-modules/maven/common-artifact-filters.nix b/pkgs/development/java-modules/maven/common-artifact-filters.nix index 4d46de674b5..e0ee7e6a59e 100644 --- a/pkgs/development/java-modules/maven/common-artifact-filters.nix +++ b/pkgs/development/java-modules/maven/common-artifact-filters.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenCommonArtifactFilters_1_3 = map (obj: fetchMaven { + version = "1.3"; + baseName = "maven-common-artifact-filters"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "21wyk4llwjyanlggy281f9n0sjshjqvd322lbhxmzn42cd9vmj0s6xih82jwqlkcxkypwymyj1gl7van55ibd98p1jjjvr93gs1cn14"; } + { type = "jar"; sha512 = "1bv4lp1a8sb79almnygiq0pmm0fdhy9pyakp6xhz91b4v1cqg03sb586yc4lg2934yv4jjbybqjbh4l0y3kgnanjbxdxdgxgyf14iif"; } + ]; + mavenCommonArtifactFilters_1_4 = map (obj: fetchMaven { version = "1.4"; baseName = "maven-common-artifact-filters"; diff --git a/pkgs/development/java-modules/maven/core.nix b/pkgs/development/java-modules/maven/core.nix index 6aed7095ad2..7f186503d31 100644 --- a/pkgs/development/java-modules/maven/core.nix +++ b/pkgs/development/java-modules/maven/core.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenCore_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-core"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "2q4s5y8bpa73a10r4m9qgzfsczcap147p5gcc9inm5fx9x32sbr7zqw6xj7igsyjb9qsqpp3v727xv3ng57gczdqs1dazljqrgk9jal"; } + { type = "jar"; sha512 = "2ar2qvhig92gifm4zhd7mzcm0c7cnlyvd3d089a7chlvxhrxyhf08xxpd8sxa525sa413v2d762yx2mbhnkf564i1zw4gg7cdjl5z47"; } + ]; + mavenCore_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-core"; @@ -11,4 +22,15 @@ rec { { type = "pom"; sha512 = "1a17qcd05v08jpd9ah650kbmrdxrxjfl2jgx9fnc89x4ahzmml9fr2qal0pwnn0sw3g3j1cqbry9lwq5hzja6x779s90hqrb72s49l1"; } { type = "jar"; sha512 = "0qp0kns07h4j7d67z0j09kjn0hwf6k6iz4vp2pmisx131f98acm516y8ca35ly7pp6zn9mdk3c4nh9c0rd7xnqvi12ijqrfvg01dri2"; } ]; + + mavenCore_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-core"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1a17qcd05v08jpd9ah650kbmrdxrxjfl2jgx9fnc89x4ahzmml9fr2qal0pwnn0sw3g3j1cqbry9lwq5hzja6x779s90hqrb72s49l1"; } + { type = "jar"; sha512 = "0qp0kns07h4j7d67z0j09kjn0hwf6k6iz4vp2pmisx131f98acm516y8ca35ly7pp6zn9mdk3c4nh9c0rd7xnqvi12ijqrfvg01dri2"; } + ]; } diff --git a/pkgs/development/java-modules/maven/doxia-sink-api.nix b/pkgs/development/java-modules/maven/doxia-sink-api.nix index 6acf39b480d..7454f7bbc96 100644 --- a/pkgs/development/java-modules/maven/doxia-sink-api.nix +++ b/pkgs/development/java-modules/maven/doxia-sink-api.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenDoxiaSinkApi_1_0_alpha7 = map (obj: fetchMaven { + version = "1.0-alpha-7"; + baseName = "doxia-sink-api"; + package = "/org/apache/maven/doxia"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3lb710zyldqysy19cgsan6mb5yrxx07vphddasq4kv1z9p5l4mpx9jq8fdhcxm4bgrfpdxkrdy2z4h2w8kc3gp2dk5g515x854jhqar"; } + { type = "jar"; sha512 = "0q2vn7yyl8qvsifb629jh3hmaa5pkj5y22zy7qbji1xmn28qp0n1skfvlmpn0m8djwzmayw6xjbxhxvspzc9a14n3nkmjzmr5yz053a"; } + ]; + mavenDoxiaSinkApi_1_0_alpha10 = map (obj: fetchMaven { version = "1.0-alpha-10"; baseName = "doxia-sink-api"; diff --git a/pkgs/development/java-modules/maven/error-diagnostics.nix b/pkgs/development/java-modules/maven/error-diagnostics.nix index 22ac264bdd1..c8993f1f0c9 100644 --- a/pkgs/development/java-modules/maven/error-diagnostics.nix +++ b/pkgs/development/java-modules/maven/error-diagnostics.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenErrorDiagnostics_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-error-diagnostics"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2rpzlgi1hyiq1qmfn9fdr3317mq990y67zb0jvyah7sgr5x969l984cfigwdcw0m7i4kpg5157myq4cps3d9pz81h4wx4plwwpkyp2v"; } + { type = "pom"; sha512 = "3r8r5sw3zbyms1yk1811cxh2a6p86lhg8aa9b6whn97mx3gmy9zy2nhsadgnxw1hbc2y6l1pk3xs2q73hmvag1bapks5bm7higmgdpg"; } + ]; + mavenErrorDiagnostics_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-error-diagnostics"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "3czdrv2s1gafclm57m5qxw3aaxrm3r3z9yggscxg60fk0hn6jlpygclghkrl2g7c8ggdqdd01y6zcj1wgzq32yp1cd4s3kakf2y25dm"; } { type = "pom"; sha512 = "3l0cpg0ssivfnadffc68cnac65vpfpl0qa9a4ik82jxcwhfa00337jxz37vyqaqs1vjrvd2cqhmjayddwkpwc8aqnz3nr0rlqnqzm7g"; } ]; + + mavenErrorDiagnostics_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-error-diagnostics"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3czdrv2s1gafclm57m5qxw3aaxrm3r3z9yggscxg60fk0hn6jlpygclghkrl2g7c8ggdqdd01y6zcj1wgzq32yp1cd4s3kakf2y25dm"; } + { type = "pom"; sha512 = "3l0cpg0ssivfnadffc68cnac65vpfpl0qa9a4ik82jxcwhfa00337jxz37vyqaqs1vjrvd2cqhmjayddwkpwc8aqnz3nr0rlqnqzm7g"; } + ]; } diff --git a/pkgs/development/java-modules/maven/filtering.nix b/pkgs/development/java-modules/maven/filtering.nix new file mode 100644 index 00000000000..5851a3db195 --- /dev/null +++ b/pkgs/development/java-modules/maven/filtering.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenFiltering_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "maven-filtering"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "022n451vgprms5rp26iynlg7yn7p1l71d5sd5r177dmw0250pvrr5gvjrriq8fis2rxbdhr42zl1xm2mmzlg6sj55izzy03dwryhydn"; } + { type = "jar"; sha512 = "33ing5r916n71skj75cikhrapns28l6ryxw9q3yn5hyqzsbj2yk7lzss87ardg9j3wkmb4rpj9mkb63w0fljwjfpbja6qmzxrybj5rp"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/model.nix b/pkgs/development/java-modules/maven/model.nix index fa3abf7c4d2..34832c371d5 100644 --- a/pkgs/development/java-modules/maven/model.nix +++ b/pkgs/development/java-modules/maven/model.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenModel_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-model"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0v4fzp4p71zjdxbf0lwjifydrxh9ag2c6pqc4n07hnr2rvcsx8n1rhb46ifaq6ycxps64fjnwkn29i5wlfqy9yfdh8gjs6i2sy523nv"; } + { type = "pom"; sha512 = "1r5bk36120534ngqkh8rbxi0q0allkaqy6yxvs6s5vwjq0gvm12snp6y6vxvh5p4bljpfms7r4ljglgnnfdrl8l8vmrj0af201gnv3m"; } + ]; + mavenModel_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-model"; @@ -12,6 +23,17 @@ rec { { type = "pom"; sha512 = "2vvyawhfq0gwa54ir5l2drcfxphkd47ghwgz89v3vsqgjry714vp01pa5a6yjlwfd45mknyrb71ws6dki4zjgzhdm09ck7cxg5qkpr9"; } ]; + mavenModel_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-model"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "14pxgdcim20x9lisf510nazzlcjxv9fpqabkdn0d86qa7d9270m4fmya5crasx2np9h0gxl407d77vcjf99fdxizg7i32w35yljqp3z"; } + { type = "pom"; sha512 = "2vvyawhfq0gwa54ir5l2drcfxphkd47ghwgz89v3vsqgjry714vp01pa5a6yjlwfd45mknyrb71ws6dki4zjgzhdm09ck7cxg5qkpr9"; } + ]; + mavenModel_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; baseName = "maven-model"; diff --git a/pkgs/development/java-modules/maven/monitor.nix b/pkgs/development/java-modules/maven/monitor.nix index 1304304257a..f127efba210 100644 --- a/pkgs/development/java-modules/maven/monitor.nix +++ b/pkgs/development/java-modules/maven/monitor.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenMonitor_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-monitor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3ssw8r9qdhbvi21y8lqz39aml2l9pzw4g26hvlh3rbshvhhgsm672jl1pv8z5pbs73w7px6dnz1yhcf7l5df53apfzq0fggrw9fsnhz"; } + { type = "pom"; sha512 = "2wdvc5r3bsrml3w6nbym9flyj3ryj308bbfmns156p9pincc73pppad5cgyv4wrwjnmwp6qfbjsz90k6481v4li88a78nmc8lhmhylr"; } + ]; + mavenMonitor_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-monitor"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "2cxspfhf3sbz68y1kjqhw2lny6s1f1kf8sfad6f1qp653g4213c9yy7y3qk9szp528866vw7daa9gbymxd66k3bm09g1q4kgnkg5wn3"; } { type = "pom"; sha512 = "0h9brjzkvxfmk549wmq4mw71yhhf1qb1diin9rnsc5nlvh189k60088b5pcc14324gffkrvdghivfy8spjci5izmay87qk7hfsg2lxc"; } ]; + + mavenMonitor_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-monitor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2cxspfhf3sbz68y1kjqhw2lny6s1f1kf8sfad6f1qp653g4213c9yy7y3qk9szp528866vw7daa9gbymxd66k3bm09g1q4kgnkg5wn3"; } + { type = "pom"; sha512 = "0h9brjzkvxfmk549wmq4mw71yhhf1qb1diin9rnsc5nlvh189k60088b5pcc14324gffkrvdghivfy8spjci5izmay87qk7hfsg2lxc"; } + ]; } diff --git a/pkgs/development/java-modules/maven/plugin-annotations.nix b/pkgs/development/java-modules/maven/plugin-annotations.nix new file mode 100644 index 00000000000..da7d52242a3 --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-annotations.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenPluginAnnotations = map (obj: fetchMaven { + version = "3.1"; + baseName = "maven-plugin-annotations"; + package = "/org/apache/maven/plugin-tools"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "17zyw3j4zbg1hhj18i4q1f0r8gdxl3q9x5ksyqlyr0mrw2sadc6lvbbhyp3l7vsbddl4bgdx36gwvjp5d97gbmk1nbpi1vabadfhq76"; } + { type = "jar"; sha512 = "0rk2nzkwcrkfy3vs0zl0l2lxp3w4hkwxrypisbivv5al7sc8lbzls6jgpp3h5gx9kk4scjj24qf5vyimnbadj63rvqffg581fs2zgl9"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/plugin-api.nix b/pkgs/development/java-modules/maven/plugin-api.nix index 56069bf1970..ed791a86955 100644 --- a/pkgs/development/java-modules/maven/plugin-api.nix +++ b/pkgs/development/java-modules/maven/plugin-api.nix @@ -23,6 +23,17 @@ rec { { type = "jar"; sha512 = "0hvl32k09wr34b6v0wl27y6353mx3afsgwyfw0vpx5aa5b8wiw86vlbknh3kjl43zp2ffxq6b4c7n07jq3y2wczz08gscs5apszhj9q"; } ]; + mavenPluginApi_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-plugin-api"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "23qj23k049jz4mp77h2wj4mnjqszb99l4xvxas93cpnbdl51a5s0d0rsg60a8zg0ic04n6fr8nig0vvmmcsggx93a96w4p3na97q30n"; } + { type = "jar"; sha512 = "0hvl32k09wr34b6v0wl27y6353mx3afsgwyfw0vpx5aa5b8wiw86vlbknh3kjl43zp2ffxq6b4c7n07jq3y2wczz08gscs5apszhj9q"; } + ]; + mavenPluginApi_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; baseName = "maven-plugin-api"; diff --git a/pkgs/development/java-modules/maven/plugin-descriptor.nix b/pkgs/development/java-modules/maven/plugin-descriptor.nix index 35b829a8578..397a7610cfe 100644 --- a/pkgs/development/java-modules/maven/plugin-descriptor.nix +++ b/pkgs/development/java-modules/maven/plugin-descriptor.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginDescriptor_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-plugin-descriptor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0f23srb1clkmvq05rcmv8gn7lifaw5f1i2vqyn2cfnhgcmp9i32xsbhqpx9y0rqlv6497x80dck7xylp22d3hnqkpm3pxgws9wsz7sm"; } + { type = "pom"; sha512 = "10hra81gs8swq00k4rw3ip8wr9gl4d7vd3621ga4298b466wic7sbb9fy9ifw22q49ia7hkigqi4ha73q7kmrl7ihnb9iv4vil02yj6"; } + ]; + mavenPluginDescriptor_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-plugin-descriptor"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "0q9jw44v1mi489bqmdvj7jpv753vdp9jzp50ky6pd912x190spkw6ccmpc87azmwsf131d4h0k0fqi6iidl9ip22a8rwaa22yq7gxi8"; } { type = "pom"; sha512 = "0c4hrb6qhi8wxw7acyphv6l33973vhvg7vjknc3bx8bg36404ky9k78q79r3p2an2886hdfayb0l7wji86bq4q8464754gbx02ci7r8"; } ]; + + mavenPluginDescriptor_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-plugin-descriptor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0q9jw44v1mi489bqmdvj7jpv753vdp9jzp50ky6pd912x190spkw6ccmpc87azmwsf131d4h0k0fqi6iidl9ip22a8rwaa22yq7gxi8"; } + { type = "pom"; sha512 = "0c4hrb6qhi8wxw7acyphv6l33973vhvg7vjknc3bx8bg36404ky9k78q79r3p2an2886hdfayb0l7wji86bq4q8464754gbx02ci7r8"; } + ]; } diff --git a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix index 17ed70bfa9f..3fd437441a3 100644 --- a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix +++ b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginParameterDocumenter_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-plugin-parameter-documenter"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "11yxhw6pn6np1a828ww6iq4gcg6i6l6wlr6pwx3kd0fh4cavd93rfh2khvydfsz0cw40m1kbqglnwdqbdc9d5akhwpnvhkfwsqvl8li"; } + { type = "pom"; sha512 = "0g62n2g7jcknzgnpl46fsdn9yndjv09fwijahlnmc1gh9w2v0rxyq42p133vgv13jc5wzfqyrf7mh3fq7p0w9mfbharaz92flh2caik"; } + ]; + mavenPluginParameterDocumenter_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-plugin-parameter-documenter"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "0djr58wp7a93p96sn0k24d6liabd7a4qvsd0p7lk88ws3jwfw5bqh6d0a3fyc86fkask1wi7krrvsm7i6yiw1f1r0d6xjzj8fx5m4kz"; } { type = "pom"; sha512 = "39mhwcxwcqgy6pk3qlabs1b8k8fqvkps6r1zb1n7phfwh4dklngyqdrxh90j3wjg3692l7as1k0439z2x124wlh6bzpv83jmx64jiyh"; } ]; + + mavenPluginParameterDocumenter_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-plugin-parameter-documenter"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0djr58wp7a93p96sn0k24d6liabd7a4qvsd0p7lk88ws3jwfw5bqh6d0a3fyc86fkask1wi7krrvsm7i6yiw1f1r0d6xjzj8fx5m4kz"; } + { type = "pom"; sha512 = "39mhwcxwcqgy6pk3qlabs1b8k8fqvkps6r1zb1n7phfwh4dklngyqdrxh90j3wjg3692l7as1k0439z2x124wlh6bzpv83jmx64jiyh"; } + ]; } diff --git a/pkgs/development/java-modules/maven/plugin-registry.nix b/pkgs/development/java-modules/maven/plugin-registry.nix index baccc1aeb76..7191a377a33 100644 --- a/pkgs/development/java-modules/maven/plugin-registry.nix +++ b/pkgs/development/java-modules/maven/plugin-registry.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginRegistry_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-plugin-registry"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1d9134rarw653dgn1q80dahjpkl82sfrznkhdb6s8zy6d31bbr4ry6w362r7a2p54ijx2vw3rl0jmh805p3imlf1cgra1m7pihh2b63"; } + { type = "pom"; sha512 = "0b85gmdgwwxdw4czs7383ivssp5n8nxr5vxnj8agjlx6yclxpbbw7n192c4p1hba8as1md52c08cxilibjiiahlv83bmzyh2hb0vdm3"; } + ]; + mavenPluginRegistry_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-plugin-registry"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "14mkwxvj0rbj28df9gjnkvr20paayqdmsg0vrzcb23d3xng3zc1fy5hvkifnp7xg73qxpdz0nij56lnnj7q2dqxcnmqvh0vslhc2xja"; } { type = "pom"; sha512 = "0c09imgd44b3pgnj1bjak7xn2z3mpwy9nhbchagfqkicras4djmn2dqwpm1z6p1d4khwx830x9grjrw45przan8lgc7wxzkalnnaqkf"; } ]; + + mavenPluginRegistry_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-plugin-registry"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "14mkwxvj0rbj28df9gjnkvr20paayqdmsg0vrzcb23d3xng3zc1fy5hvkifnp7xg73qxpdz0nij56lnnj7q2dqxcnmqvh0vslhc2xja"; } + { type = "pom"; sha512 = "0c09imgd44b3pgnj1bjak7xn2z3mpwy9nhbchagfqkicras4djmn2dqwpm1z6p1d4khwx830x9grjrw45przan8lgc7wxzkalnnaqkf"; } + ]; } diff --git a/pkgs/development/java-modules/maven/profile.nix b/pkgs/development/java-modules/maven/profile.nix index 674f35a2ef9..bcaae06b1f9 100644 --- a/pkgs/development/java-modules/maven/profile.nix +++ b/pkgs/development/java-modules/maven/profile.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenProfile_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-profile"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3wng0csnn4v3y2gndazg46hqriz27kkb977xzw5wr8anyharlz2ancl38zyfjf5vm18irqn8cxqklhzd3x1h0h6rlvz5z1wrrivr5kl"; } + { type = "pom"; sha512 = "063vbh2miyfvrp90hs5cff5r8cj573zysjvd79lnz7zsah3ddbg6sbv09nb0pjy76pbqgrh913dziqk12l13kwngcgpq8v38v92vh63"; } + ]; + mavenProfile_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-profile"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "2v315cv62k3lmi23msk5rj9bijsafcajw7053jdzzk4zv03vdpdndm5cr995azrpdcvkcdq2m8zh5pdf44nzcdf2rvpm4nxdc2wr5rl"; } { type = "pom"; sha512 = "05iif04frjgbmg7zb3jygn9av2ja48vs2z35b2zrlmgf3s1fxqlr4wxylrrmmk8r0hvg4qmg5j0inm414n0v4ipn08hrpzik5nhdfgy"; } ]; + + mavenProfile_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-profile"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2v315cv62k3lmi23msk5rj9bijsafcajw7053jdzzk4zv03vdpdndm5cr995azrpdcvkcdq2m8zh5pdf44nzcdf2rvpm4nxdc2wr5rl"; } + { type = "pom"; sha512 = "05iif04frjgbmg7zb3jygn9av2ja48vs2z35b2zrlmgf3s1fxqlr4wxylrrmmk8r0hvg4qmg5j0inm414n0v4ipn08hrpzik5nhdfgy"; } + ]; } diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix index 0d88850fb5d..142a311feed 100644 --- a/pkgs/development/java-modules/maven/project.nix +++ b/pkgs/development/java-modules/maven/project.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenProject_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-project"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "12k56956ad8r5fpz5ilxy1i2msg4vnpcyqc7zq9b5ncqx890bcnl9xl5f5y0bkj6l6688z6vrwi28rgj35a77x3wiwcvhgrgxyfy53a"; } + { type = "pom"; sha512 = "13z607rjazzrs3rjw6hlhpw6jip85lgdkvnkm1j17wsbhywa53x45ydyg1hzrcax8xr5zxn7mkrryp4wwwm4ihhsaz3nq8bh12yrh8p"; } + ]; + mavenProject_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-project"; diff --git a/pkgs/development/java-modules/maven/reporting-api.nix b/pkgs/development/java-modules/maven/reporting-api.nix index ea808848911..36818dc57e0 100644 --- a/pkgs/development/java-modules/maven/reporting-api.nix +++ b/pkgs/development/java-modules/maven/reporting-api.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenReportingApi_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-reporting-api"; + package = "/org/apache/maven/reporting"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "236xqa5bqih3lkfwdmfsb4wgkn8mllnzpnr4dhzch2jlhcsvl4fm1zmawk1njd8ibq9dyfg3n41a6hc8ydndh0ffxdm1mjnch9bv1da"; } + { type = "pom"; sha512 = "3vlfls0g1bjrjpgzv6zlfglr1gxwm9m6zm88m9ij8ap934cxrzqj7pkqyx0s2vc8j700xgrwj57ahmfdrdi4v1arav1m1790plbip3y"; } + ]; + mavenReportingApi_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-reporting-api"; diff --git a/pkgs/development/java-modules/maven/repository-metadata.nix b/pkgs/development/java-modules/maven/repository-metadata.nix index 125788c54f9..7e29ada0512 100644 --- a/pkgs/development/java-modules/maven/repository-metadata.nix +++ b/pkgs/development/java-modules/maven/repository-metadata.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenRepositoryMetadata_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-repository-metadata"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3qh52jisq2facab5nw35pazf99z1yn8pfklvy8hcczd4dab1pj115jimfhpx48mmlaydaw50m006imfvlivxnadfxfk3887acmhp7bv"; } + { type = "pom"; sha512 = "2sg2n3wxfanhf4jgmp2q9lh2hsnch54mzgh1clna2ywnnwh88cn37c9m9b6a0qgdc1m7yzlfg8r3k77ypfa3aa7hr3f9b2hi2k4pb0c"; } + ]; + mavenRepositoryMetadata_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-repository-metadata"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "2np435shcca1jka1gdjxs4bzzayfnfzncpnxhlfy59b32vfpvf5v0kca0zgyx7251ghhb2ks2xxd798rbzvr0gzivicwdrnd5x8g0hm"; } { type = "pom"; sha512 = "27b9z80qdkn7p4fs6k87a5i926c3dsr6jmq4rz8dyiml1svqsvvghzz59cby6n8wkx7wn003wk28jzc08x53vbk5zsvcg9ckslxhjyw"; } ]; + + mavenRepositoryMetadata_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-repository-metadata"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2np435shcca1jka1gdjxs4bzzayfnfzncpnxhlfy59b32vfpvf5v0kca0zgyx7251ghhb2ks2xxd798rbzvr0gzivicwdrnd5x8g0hm"; } + { type = "pom"; sha512 = "27b9z80qdkn7p4fs6k87a5i926c3dsr6jmq4rz8dyiml1svqsvvghzz59cby6n8wkx7wn003wk28jzc08x53vbk5zsvcg9ckslxhjyw"; } + ]; } diff --git a/pkgs/development/java-modules/maven/settings.nix b/pkgs/development/java-modules/maven/settings.nix index 73d707144bd..19f0a1ae24d 100644 --- a/pkgs/development/java-modules/maven/settings.nix +++ b/pkgs/development/java-modules/maven/settings.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenSettings_2_0_6 = map (obj: fetchMaven { + version = "2.0.6"; + baseName = "maven-settings"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3yvxlk0d40p1i0vwf4ba6k45kikcvip1vvr86k6cnhs86gfy6w1b4kw4hc6p23i978cgcl19g79m0l40nsxpav9hc07573k47ammclv"; } + { type = "pom"; sha512 = "03cz2z90h9c3lssl53glbpz9hflsgb3a14i4xr5p7lpm993c07zn7xp2f6sjcdq7b774spbiww0alll9cz2vs8m7pvvwnbxk0s09d7l"; } + ]; + mavenSettings_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-settings"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "1hy1wz2bb7f9y0rr5961zhalpbwmk0fhw49k0l527w897lz4zw7lnb8xnx530s6hmn58zqj7iwkx4spz2fahps4ss1ryk0601rzgv4a"; } { type = "pom"; sha512 = "3i2nq3r6piwhv265jhsj9hqriw6113vkqllx5s4kd4y2dspjxh6l9xprrw347nkw68904dyq9hdx76fx2nzjd16ldh41pim5lw8r15n"; } ]; + + mavenSettings_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-settings"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1hy1wz2bb7f9y0rr5961zhalpbwmk0fhw49k0l527w897lz4zw7lnb8xnx530s6hmn58zqj7iwkx4spz2fahps4ss1ryk0601rzgv4a"; } + { type = "pom"; sha512 = "3i2nq3r6piwhv265jhsj9hqriw6113vkqllx5s4kd4y2dspjxh6l9xprrw347nkw68904dyq9hdx76fx2nzjd16ldh41pim5lw8r15n"; } + ]; } diff --git a/pkgs/development/java-modules/maven/shared-incremental.nix b/pkgs/development/java-modules/maven/shared-incremental.nix new file mode 100644 index 00000000000..2d4ec372be4 --- /dev/null +++ b/pkgs/development/java-modules/maven/shared-incremental.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSharedIncremental_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "maven-shared-incremental"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1g2gsk3s5v5dg6y81a2046aqf5v19jn6i0jwha78xi3gyx7ajgxkdn2wswf9gdxxvc44qk6lzn33bl3pk3vl1b84h2hdxz7yyhajbfr"; } + { type = "pom"; sha512 = "2fqj1p1059v462casy2mzj1bg8mawb5lihx5430px9440vyl1iggqg598r6798162m8c7ilav3x71x763rchhskpqakfkvydkjhrjfr"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/shared-utils.nix b/pkgs/development/java-modules/maven/shared-utils.nix new file mode 100644 index 00000000000..9b56075383d --- /dev/null +++ b/pkgs/development/java-modules/maven/shared-utils.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSharedUtils_0_1 = map (obj: fetchMaven { + version = "0.1"; + baseName = "maven-shared-utils"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } + { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/surefire-api.nix b/pkgs/development/java-modules/maven/surefire-api.nix new file mode 100644 index 00000000000..b696beae4c4 --- /dev/null +++ b/pkgs/development/java-modules/maven/surefire-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSurefireBooter_2_12_4 = map (obj: fetchMaven { + version = "2.12.4"; + baseName = "maven-surefire-booter"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } + { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/surefire-booter.nix b/pkgs/development/java-modules/maven/surefire-booter.nix new file mode 100644 index 00000000000..b696beae4c4 --- /dev/null +++ b/pkgs/development/java-modules/maven/surefire-booter.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSurefireBooter_2_12_4 = map (obj: fetchMaven { + version = "2.12.4"; + baseName = "maven-surefire-booter"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } + { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/surefire-common.nix b/pkgs/development/java-modules/maven/surefire-common.nix new file mode 100644 index 00000000000..0d1bd53721c --- /dev/null +++ b/pkgs/development/java-modules/maven/surefire-common.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSurefireCommon_2_12_4 = map (obj: fetchMaven { + version = "2.12.4"; + baseName = "maven-surefire-common"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } + { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/toolchain.nix b/pkgs/development/java-modules/maven/toolchain.nix new file mode 100644 index 00000000000..14e6866ee32 --- /dev/null +++ b/pkgs/development/java-modules/maven/toolchain.nix @@ -0,0 +1,25 @@ +{ fetchMaven }: + +rec { + mavenToolchain_1_0 = map (obj: fetchMaven { + version = "1.0"; + baseName = "maven-toolchain"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "34kxv3l3676ddrsj2k02f9fmphcq16avafka950d5dclrcx7w37wgxx3gcf6zfixfx9zlbb7annsa05y8f0rx97g13rkqdfdj1wknky"; } + { type = "pom"; sha512 = "0arkdm0bii7cm0g8qzzfih1jk9j7myn8w2ccr6j01wsj08gv7cbjr5k9jx1iwy1vzvhhsmsj6grq678zsgbvh4msn1s44i744x4fhvy"; } + ]; + + mavenToolchain_2_0_9 = map (obj: fetchMaven { + version = "2.0.9"; + baseName = "maven-toolchain"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "34kxv3l3676ddrsj2k02f9fmphcq16avafka950d5dclrcx7w37wgxx3gcf6zfixfx9zlbb7annsa05y8f0rx97g13rkqdfdj1wknky"; } + { type = "pom"; sha512 = "0arkdm0bii7cm0g8qzzfih1jk9j7myn8w2ccr6j01wsj08gv7cbjr5k9jx1iwy1vzvhhsmsj6grq678zsgbvh4msn1s44i744x4fhvy"; } + ]; +} diff --git a/pkgs/development/java-modules/mavenPlugins.nix b/pkgs/development/java-modules/mavenPlugins.nix index 17d4c86ba99..15be1594117 100644 --- a/pkgs/development/java-modules/mavenPlugins.nix +++ b/pkgs/development/java-modules/mavenPlugins.nix @@ -9,8 +9,134 @@ let in rec { inherit mavenbuild fetchMaven poms; - # Standard plugins used by pretty much every Maven build - mavenDefault = lib.flatten [ aetherUtil_0_9_0_M2 bsh_2_0_b4 classworlds_1_1 commonsCli_1_0 commonsLang_2_3 mavenArtifact_2_0_9 mavenArtifact_3_0_3 mavenArtifactManager_2_0_9 mavenClean_2_5 mavenCommonArtifactFilters_1_4 mavenCompiler_3_1 mavenCore_2_0_9 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcer_1_3_1 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenErrorDiagnostics_2_0_9 mavenInstall_2_4 mavenJar_2_4 mavenModel_2_0_9 mavenModel_3_0_3 mavenMonitor_2_0_9 mavenPluginApi_2_0_6 mavenPluginApi_2_0_9 mavenPluginApi_3_0_3 mavenPluginDescriptor_2_0_9 mavenPluginParameterDocumenter_2_0_9 mavenPluginRegistry_2_0_9 mavenProfile_2_0_9 mavenProject_2_0_9 mavenReplacer_1_5_3 mavenReportingApi_2_0_9 mavenRepositoryMetadata_2_0_9 mavenResources_2_6 mavenSettings_2_0_9 mavenSurefire_2_17 plexusComponentAnnotations_1_5_5 plexusContainerDefault_1_0_alpha9_stable1 plexusI18n_1_0_beta6 plexusInteractivityApi_1_0_alpha4 plexusUtils_1_5_8 plexusUtils_2_0_6 plexusUtils_3_0 ] ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 apache_10 apache_11 apache_13 apache_3 apache_4 apache_6 beanshell_2_0_b4 codehausParent_4 doxia_1_0_alpha10 doxia_1_0 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_6 maven_2_0_9 maven_3_0_3 mavenParent_15 mavenParent_21 mavenParent_22 mavenParent_23 mavenParent_5 mavenParent_6 mavenParent_8 mavenPlugins_22 mavenPlugins_23 mavenPlugins_24 mavenReporting_2_0_9 mavenSharedComponents_17 mavenSharedComponents_19 mojoParent_32 plexus_1_0_4 plexus_2_0_2 plexus_2_0_7 plexusComponents_1_1_4 plexusContainers_1_0_3 plexusContainers_1_5_5 sonatypeForgeParent_5 sonatypeParent_7 sonatypeSpiceParent_16 surefire_2_17 ]); + # "Minimal" + mavenMinimal = lib.flatten +[ +classworlds_1_1 +commonsCli_1_0 +findbugsJsr305_2_0_1 +junit_3_8_1 +mavenArchiver_2_5 +mavenArtifact_2_0_6 +mavenArtifact_2_0_9 +mavenArtifactManager_2_0_6 +mavenArtifactManager_2_0_9 +mavenArtifactManager_2_2_1 +mavenClean_2_5 +mavenCompiler_3_1 +mavenCore_2_0_6 +mavenCore_2_0_9 +mavenCore_2_2_1 +mavenDoxiaSinkApi_1_0_alpha7 +mavenErrorDiagnostics_2_0_6 +mavenErrorDiagnostics_2_0_9 +mavenErrorDiagnostics_2_2_1 +mavenFiltering_1_1 +mavenInstall_2_4 +mavenJar_2_4 +mavenModel_2_0_6 +mavenModel_2_0_9 +mavenModel_2_2_1 +mavenMonitor_2_0_6 +mavenMonitor_2_0_9 +mavenMonitor_2_2_1 +mavenPluginDescriptor_2_0_6 +mavenPluginDescriptor_2_0_9 +mavenPluginDescriptor_2_2_1 +mavenPluginParameterDocumenter_2_0_6 +mavenPluginParameterDocumenter_2_0_9 +mavenPluginParameterDocumenter_2_2_1 +mavenProfile_2_0_6 +mavenProfile_2_0_9 +mavenProfile_2_2_1 +mavenProject_2_0_6 +mavenProject_2_0_9 +mavenPluginAnnotations_3_1 +mavenPluginApi_2_0_6 +mavenPluginApi_2_0_9 +mavenPluginApi_2_2_1 +mavenPluginRegistry_2_0_6 +mavenPluginRegistry_2_0_9 +mavenPluginRegistry_2_2_1 +mavenReportingApi_2_0_6 +mavenReportingApi_2_0_9 +mavenRepositoryMetadata_2_0_6 +mavenRepositoryMetadata_2_0_9 +mavenRepositoryMetadata_2_2_1 +mavenResources_2_6 +mavenSettings_2_0_6 +mavenSettings_2_0_9 +mavenSettings_2_2_1 +mavenSharedIncremental_1_1 +mavenSharedUtils_0_1 +mavenSurefire_2_12_4 +mavenSurefireApi_2_12_4 +mavenSurefireBooter_2_12_4 +mavenSurefireCommon_2_12_4 +mavenToolchain_1_0 +mavenToolchain_2_0_9 +plexusBuildApi_0_0_4 +plexusCompilerApi_2_2 +plexusContainerDefault_1_0_alpha9_stable1 +plexusInteractivityApi_1_0_alpha4 +plexusInterpolation_1_13 +plexusUtils_1_5_1 +plexusUtils_2_0_5 +plexusUtils_3_0 +] +++ +(with +poms; +[ +apache_3 +apache_4 +apache_5 +apache_6 +apache_9 +apache_10 +apache_11 +apache_13 +doxia_1_0_alpha7 +maven_2_0_6 +maven_2_0_9 +maven_2_2_1 +mavenParent_5 +mavenParent_8 +mavenParent_11 +mavenParent_13 +mavenParent_21 +mavenParent_22 +mavenParent_23 +mavenPlugins_22 +mavenPlugins_23 +mavenPlugins_24 +mavenPluginTools_3_1 +mavenReporting_2_0_6 +mavenReporting_2_0_9 +mavenSharedComponents_12 +mavenSharedComponents_17 +mavenSharedComponents_18 +mavenSharedComponents_19 +plexus_1_0_4 +plexus_1_0_11 +plexus_2_0_3 +plexus_2_0_6 +plexus_2_0_7 +plexus_3_3_1 +plexusCompiler_2_2 +plexusComponents_1_1_15 +plexusComponents_1_3_1 +plexusComponentAnnotations_1_5_5 +plexusContainers_1_0_3 +plexusContainers_1_5_5 +sonatypeForgeParent_3 +sonatypeForgeParent_5 +sonatypeForgeParent_10 +sonatypeSpiceParent_10 +sonatypeSpiceParent_16 +sonatypeSpiceParent_17 +surefire_2_12_4 +]); animalSniffer_1_11 = map (obj: fetchMaven { version = "1.11"; @@ -100,6 +226,17 @@ in rec { { type = "jar"; sha512 = "3j8smsx6wk085iic5qhknrszixxna6szmvk2rn9zkn75ffjr7ham72hw9cmxf5160j73n8f2cmcbw1x462fqy12fqqpmzx08i1sbwcv"; } ]; + mavenSurefire_2_12_4 = map (obj: fetchMaven rec { + version = "2.12.4"; + baseName = "maven-surefire-plugin"; + package = "/org/apache/maven/plugins"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3qkzmh5fk3s7y3qy91qck1nc0yadwsizxy61wp410dspsd73cchqll7vjl11cj6k5kywjxsl9dihy2gp949nh8380lbvs11g83wrgmv"; } + { type = "jar"; sha512 = "2sjq2l8i97h3ay8wwrsi75cfs9d1im5ar2sn2zv4q6xsv4v3hh5y481l9xwc5dnbcfdjs38ald0z60pxpcyiqrng6h69s2ws8fhb0mm"; } + ]; + mavenSurefire_2_17 = map (obj: fetchMaven rec { version = "2.17"; baseName = "maven-surefire-plugin"; diff --git a/pkgs/development/java-modules/plexus/build-api.nix b/pkgs/development/java-modules/plexus/build-api.nix new file mode 100644 index 00000000000..2425a6f12ba --- /dev/null +++ b/pkgs/development/java-modules/plexus/build-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusBuildApi_0_0_4 = map (obj: fetchMaven { + version = "0.0.4"; + baseName = "plexus-build-api"; + package = "/org/sonatype/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0ihr946rd2cwc1qsi8g104vpyz1ml5ypl3374z3rhlmm4i0xgn6vsa9sg8bnh1848klhxsp11i0gm4adg6lzk3s88mqm5b4wlbsdvv2"; } + { type = "pom"; sha512 = "1135ca387fvzjb04j8z93jmy61zpi2w7a6c6rq9xxk33xz9nxzzwvca7k40j6jsj0bmjbswrpdck7qh2921rn3j4vfsihbi9g7mb31r"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/compiler-api.nix b/pkgs/development/java-modules/plexus/compiler-api.nix new file mode 100644 index 00000000000..2ef5d3cdab1 --- /dev/null +++ b/pkgs/development/java-modules/plexus/compiler-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusCompilerApi_2_2 = map (obj: fetchMaven { + version = "2.2"; + baseName = "plexus-compiler-api"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3by7icjfiymp7g2v1ci5dqwml6ibzh2njyg2w43kvaz3ydcxkzmfg5s97wsdqjsii7vdgqyhr16ydsn6mr90wbjvsi6wasaq1rqa812"; } + { type = "pom"; sha512 = "0pdl78hp921lgkfya54wl8hxgm1c5474j1p921q5ix1knx1rlr4klpjwx212wy2m7b6bxq0bkf8n66mqjr72rh2rh308qij00ymrga8"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/interpolation.nix b/pkgs/development/java-modules/plexus/interpolation.nix new file mode 100644 index 00000000000..17660f0804c --- /dev/null +++ b/pkgs/development/java-modules/plexus/interpolation.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusInterpolation_1_13 = map (obj: fetchMaven { + version = "1.13"; + baseName = "plexus-interpolation"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0sm1kaxsvn8007br7nr9ncjppmfkp8nzr6ipwwx86idai9bqcsm4kh2scxf893s4jf2ii7f5106dd5w4h7bw67csalhqqzi1zpndbk4"; } + { type = "pom"; sha512 = "3hlv9l82yxjbnaf2vqq6p3w38jq2id15a2yjg6wj810fl2286zz5ci3g3x7x0z0xdrxrrfvswns92v25197vpg0dki113lwdbw4bsvr"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix index 672a43455c9..17dc1acdf1f 100644 --- a/pkgs/development/java-modules/plexus/utils.nix +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -12,6 +12,17 @@ rec { { type = "pom"; sha512 = "0vbzdfsdcc4cq7hdqzb1vdfxp23vnavq7z4qmmlb4d4fiqj5wqdgagrs43gl7yzca2azpyj3kyxgaipimi7gck07jcsz0pzljkplk4w"; } ]; + plexusUtils_1_5_1 = map (obj: fetchMaven { + version = "1.5.1"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "00vf59sg0wa4kip1m365xh3ngggvnr7avkf1mwsljyag5h8pb4fhpba550ka2mbpp10z8d7mjhj3wxinvf19m2bmrjmqvdxiwraa5jh"; } + { type = "pom"; sha512 = "161cdrgjrw2cab4lf189hwa4s1lh42fsahjcjkir696sx0m9bmmxgjbhwxl1l8kpaxn5p6jf701bx16gry393pws636vy59nvnnx1sw"; } + ]; + plexusUtils_1_5_8 = map (obj: fetchMaven { version = "1.5.8"; baseName = "plexus-utils"; @@ -23,6 +34,17 @@ rec { { type = "pom"; sha512 = "06z4gkq3bh2pwyj8pvaly9fihd8gbgcqp3jxl05vkj2rcdb4jw3lw3hwn8f8ggqi17i2fdm8cbndkqgr9vdgiz45p8f1nx8kjlqikbi"; } ]; + plexusUtils_2_0_5 = map (obj: fetchMaven { + version = "2.0.5"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3g72mxvlsf18hl1vn9sq4i13nlpd66fkn2l8d96883f4n638sx031f8cnx6f08my3rfc67pypy4lsiagx2rj2x5ccqp9g9kzvbh4i5w"; } + { type = "pom"; sha512 = "2rkkshqf3ahjijvr64ndzh10iksbz7pj0618drvg9iklnpv6i6y904fi31xjg7vxb3fy17k3mvi49pr2jxznbf1c8ndwbyawlvmw9j7"; } + ]; + plexusUtils_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "plexus-utils"; diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index 39dc9528140..3e5ef87223f 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -33,6 +33,14 @@ rec { type = "pom"; }; + apache_5 = fetchMaven { + version = "5"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; + type = "pom"; + }; + apache_6 = fetchMaven { version = "6"; baseName = "apache"; @@ -41,6 +49,14 @@ rec { type = "pom"; }; + apache_9 = fetchMaven { + version = "9"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; + type = "pom"; + }; + apache_10 = fetchMaven { version = "10"; baseName = "apache"; @@ -81,6 +97,14 @@ rec { type = "pom"; }; + doxia_1_0_alpha7 = fetchMaven { + version = "1.0-alpha-7"; + baseName = "doxia"; + package = "/org/apache/maven/doxia"; + sha512 = "0fg3l7dyi0c7r1h9rzjn23gv57kc67jpzlcji6yh4nawp3byfbz1rq8wnbj3av3wd29v9h2ff34p06ia9wxbs8q3kz4xy31w7sw7fxg"; + type = "pom"; + }; + doxia_1_0_alpha10 = fetchMaven { version = "1.0-alpha-10"; baseName = "doxia"; @@ -129,6 +153,14 @@ rec { type = "pom"; }; + maven_2_2_1 = fetchMaven { + version = "2.2.1"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "2b3wfqxbg0v2lm82a7nzw8wzw708isfrnzriy90bk89dhnj59qzpgvwrjbhs26a32gnpii5ivivh1msq51k1b7j5knmyf0hi1v0blw0"; + type = "pom"; + }; + maven_3_0_3 = fetchMaven { version = "3.0.3"; baseName = "maven"; @@ -217,6 +249,22 @@ rec { type = "pom"; }; + mavenPluginTools_3_1 = fetchMaven { + version = "3.1"; + baseName = "maven-plugin-tools"; + package = "/org/apache/maven/plugin-tools"; + sha512 = "07flf37pkkc34466bnzi4rfwdlgvd3ydasm39qzy2hybxv26306zrhipglmgsjvd84z07dscij4n7qdd2jkx9hrkm900hid4xwvxzrs"; + type = "pom"; + }; + + mavenReporting_2_0_6 = fetchMaven { + version = "2.0.6"; + baseName = "maven-reporting"; + package = "/org/apache/maven/reporting"; + sha512 = "3bi678sg28yxhlby4d3a6mq9fhg1qnjb57kbkhi7dfx9g0c1p6cxhg8cixjz9wv31lkjpspbpp1fq0z29a93lqrjqczlg8a7i1sg554"; + type = "pom"; + }; + mavenReporting_2_0_9 = fetchMaven { version = "2.0.9"; baseName = "maven-reporting"; @@ -225,6 +273,14 @@ rec { type = "pom"; }; + mavenSharedComponents_12 = fetchMaven { + version = "12"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "3f2pifiapx09h3wv9lglm0mkd9gid268lfz27jhqb4ck2yxna31872db7cj5c9lsg0pl2l3bwgp526whq14zj2qffqxrdq8mn9m0rhy"; + type = "pom"; + }; + mavenSharedComponents_17 = fetchMaven { version = "17"; baseName = "maven-shared-components"; @@ -233,6 +289,14 @@ rec { type = "pom"; }; + mavenSharedComponents_18 = fetchMaven { + version = "18"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "2qqabrvgs4kb14v28qkfwj16n715mj5mh4m8aw0dybi5igmrvwh1d8jsjggdfbh929m6499w8x5s6aw0gbzmfzr3wjkz54dqxnm49p0"; + type = "pom"; + }; + mavenSharedComponents_19 = fetchMaven { version = "19"; baseName = "maven-shared-components"; @@ -257,6 +321,14 @@ rec { type = "pom"; }; + plexus_1_0_11 = fetchMaven { + version = "1.0.11"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "20fb1yvg26wg3lih55m8m4i1idiffyg3jlkvazmxqqvnahz2llgd5cfvqcrzg8lkinnypr4ic5glci4lza46k1sfl5nrviyfx0n7kgr"; + type = "pom"; + }; + plexus_2_0_2 = fetchMaven { version = "2.0.2"; baseName = "plexus"; @@ -265,6 +337,22 @@ rec { type = "pom"; }; + plexus_2_0_3 = fetchMaven { + version = "2.0.3"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "15adqpm0gz7c0jwjd4yk0k8h4h7vnz15v1fdmzb6rgs6avl1dx84r5l0fqs6b02kw008rg68inii7nl4m5xwqrj807wr8qzrjm02cam"; + type = "pom"; + }; + + plexus_2_0_6 = fetchMaven { + version = "2.0.6"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "07rrw1yldy4c2qvwv3hcf9rdbr0jf57qsnnv2ai9fajwhjyjkgjixm2zlsid41bm2w8hacg9crzy6nfz8yh1sdh5p767niy9jripq2h"; + type = "pom"; + }; + plexus_2_0_7 = fetchMaven { version = "2.0.7"; baseName = "plexus"; @@ -273,6 +361,22 @@ rec { type = "pom"; }; + plexus_3_3_1 = fetchMaven { + version = "3.3.1"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "1q1p0sfzkhdpknaf0ysq7vzd0qip9q86z62nwamfh9gdsp7lh99kh6hmxav2daha462c3jra6clfniyqrbvs07jwjhf4c79rwhnqc2q"; + type = "pom"; + }; + + plexusCompiler_2_2 = fetchMaven { + version = "2.2"; + baseName = "plexus-compiler"; + package = "/org/codehaus/plexus"; + sha512 = "26sr1hg214qf65nym85viv1z4nk1bgqahx7n4bq3did49s9ymgz2c08vw7zdlcqws5jndz9n2xlyq285plgv3xx2mxrrsi2r24zmw29"; + type = "pom"; + }; + plexusComponents_1_1_4 = fetchMaven { version = "1.1.4"; baseName = "plexus-components"; @@ -281,6 +385,22 @@ rec { type = "pom"; }; + plexusComponents_1_1_15 = fetchMaven { + version = "1.1.15"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "0lfzdq1wlsnkiapzjs8cqi2kzkaw9lfjhdhmf1pz2x83m5njfx2y59v14wgcs2k4cig8kjr45v4qnmd7mp03k8gginzflc1qi1y7yv6"; + type = "pom"; + }; + + plexusComponents_1_3_1 = fetchMaven { + version = "1.3.1"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "16bnfja035zb508f340y64v4vk7pkldn8bvnxvbk0grk8a76rirsn4dl60x3hgmasgkb0y75gr9qp4y72m079klhgg0mbvcfvslkxqb"; + type = "pom"; + }; + plexusContainers_1_0_3 = fetchMaven { version = "1.0.3"; baseName = "plexus-containers"; @@ -297,6 +417,14 @@ rec { type = "pom"; }; + sonatypeForgeParent_3 = fetchMaven { + version = "3"; + baseName = "forge-parent"; + package = "/org/sonatype/forge"; + sha512 = "20x89zl6k0wgd1gb6ysxm6bmgqxwyz3d7zyjn8bwzkz93k7lxnxm0k7skvha283q9ay4cd2vkjisi5avl1f3wvz89rrwg136gmdlksv"; + type = "pom"; + }; + sonatypeForgeParent_5 = fetchMaven { version = "5"; baseName = "forge-parent"; @@ -305,6 +433,14 @@ rec { type = "pom"; }; + sonatypeForgeParent_10 = fetchMaven { + version = "10"; + baseName = "forge-parent"; + package = "/org/sonatype/forge"; + sha512 = "3fpnvrxfkxpxqdsn6g7w1zyql4v0z9iqbjprhh4c6rldrbvq4h3yh7dl5sw4h7av516zhmb3bkc9ycfdr5gs34sfb6f6x5hk7qc374a"; + type = "pom"; + }; + sonatypeParent_7 = fetchMaven { version = "7"; baseName = "oss-parent"; @@ -313,6 +449,14 @@ rec { type = "pom"; }; + sonatypeSpiceParent_10 = fetchMaven { + version = "10"; + baseName = "spice-parent"; + package = "/org/sonatype/spice"; + sha512 = "0gg2cxqvfmg6jk7qi2f4hcgskpd1ysnf1d5vay8dza40wfbk2vy7qvhgjhg55dpbjkadmsj483hg81qdzwqbxmagd2xr9j9062hbja8"; + type = "pom"; + }; + sonatypeSpiceParent_16 = fetchMaven { version = "16"; baseName = "spice-parent"; @@ -321,6 +465,22 @@ rec { type = "pom"; }; + sonatypeSpiceParent_17 = fetchMaven { + version = "17"; + baseName = "spice-parent"; + package = "/org/sonatype/spice"; + sha512 = "1jqqp5xylm9bjz33wab7mj49xqczvkhpp4aysrcngszxmil61kanpjmn5ks5r0hq4waj0bqnr91p2p9a7ylqnqjs6ib1x9psl5c9cyw"; + type = "pom"; + }; + + surefire_2_12_4 = fetchMaven { + version = "2.12.4"; + baseName = "surefire"; + package = "/org/apache/maven/surefire"; + sha512 = "1zyppjqqwpzcp16g7v49r9fsgdvrny325r583kpis5497ic0qbcczxn53x7s1hnmhgcs33dr0k3alrwl7m574lm2qdgj0s8x18pl6gb"; + type = "pom"; + }; + surefire_2_17 = fetchMaven { version = "2.17"; baseName = "surefire"; diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix index 760dd01e732..a777d57ec2c 100644 --- a/pkgs/top-level/java-packages.nix +++ b/pkgs/top-level/java-packages.nix @@ -25,29 +25,43 @@ in { inherit (callPackage ../development/java-modules/apache/commons-lang.nix { inherit fetchMaven; }) commonsLang_2_3; + inherit (callPackage ../development/java-modules/findbugs/jsr305.nix { inherit fetchMaven; }) + findbugsJsr305_2_0_1; + inherit (callPackage ../development/java-modules/hamcrest/core.nix { inherit fetchMaven; }) hamcrestCore_1_3; - inherit (callPackage ../development/java-modules/junit { inherit mavenbuild; }) + inherit (callPackage ../development/java-modules/junit { inherit mavenbuild fetchMaven; }) + junit_3_8_1 junit_4_12; + inherit (callPackage ../development/java-modules/maven/archiver.nix { inherit fetchMaven; }) + mavenArchiver_2_5; + inherit (callPackage ../development/java-modules/maven/artifact.nix { inherit fetchMaven; }) + mavenArtifact_2_0_6 mavenArtifact_2_0_9 mavenArtifact_3_0_3; inherit (callPackage ../development/java-modules/maven/artifact-manager.nix { inherit fetchMaven; }) - mavenArtifactManager_2_0_9; + mavenArtifactManager_2_0_6 + mavenArtifactManager_2_0_9 + mavenArtifactManager_2_2_1; inherit (callPackage ../development/java-modules/maven/common-artifact-filters.nix { inherit fetchMaven; }) + mavenCommonArtifactFilters_1_3 mavenCommonArtifactFilters_1_4; inherit (callPackage ../development/java-modules/maven/core.nix { inherit fetchMaven; }) - mavenCore_2_0_9; + mavenCore_2_0_6 + mavenCore_2_0_9 + mavenCore_2_2_1; inherit (callPackage ../development/java-modules/maven/dependency-tree.nix { inherit fetchMaven; }) mavenDependencyTree_2_1; inherit (callPackage ../development/java-modules/maven/doxia-sink-api.nix { inherit fetchMaven; }) + mavenDoxiaSinkApi_1_0_alpha7 mavenDoxiaSinkApi_1_0_alpha10; inherit (callPackage ../development/java-modules/maven/enforcer.nix { inherit fetchMaven; }) @@ -55,43 +69,98 @@ in { mavenEnforcerRules_1_3_1; inherit (callPackage ../development/java-modules/maven/error-diagnostics.nix { inherit fetchMaven; }) - mavenErrorDiagnostics_2_0_9; + mavenErrorDiagnostics_2_0_6 + mavenErrorDiagnostics_2_0_9 + mavenErrorDiagnostics_2_2_1; + + inherit (callPackage ../development/java-modules/maven/filtering.nix { inherit fetchMaven; }) + mavenFiltering_1_1; + + inherit (callPackage ../development/java-modules/maven-hello { inherit mavenbuild; }) + mavenHello_1_0; inherit (callPackage ../development/java-modules/maven/model.nix { inherit fetchMaven; }) + mavenModel_2_0_6 mavenModel_2_0_9 + mavenModel_2_2_1 mavenModel_3_0_3; inherit (callPackage ../development/java-modules/maven/monitor.nix { inherit fetchMaven; }) - mavenMonitor_2_0_9; + mavenMonitor_2_0_6 + mavenMonitor_2_0_9 + mavenMonitor_2_2_1; + + inherit (callPackage ../development/java-modules/maven/plugin-annotations.nix { inherit fetchMaven; }) + mavenPluginAnnotations_3_1; inherit (callPackage ../development/java-modules/maven/plugin-api.nix { inherit fetchMaven; }) mavenPluginApi_2_0_6 mavenPluginApi_2_0_9 + mavenPluginApi_2_2_1 mavenPluginApi_3_0_3; inherit (callPackage ../development/java-modules/maven/plugin-descriptor.nix { inherit fetchMaven; }) - mavenPluginDescriptor_2_0_9; + mavenPluginDescriptor_2_0_6 + mavenPluginDescriptor_2_0_9 + mavenPluginDescriptor_2_2_1; inherit (callPackage ../development/java-modules/maven/plugin-parameter-documenter.nix { inherit fetchMaven; }) - mavenPluginParameterDocumenter_2_0_9; + mavenPluginParameterDocumenter_2_0_6 + mavenPluginParameterDocumenter_2_0_9 + mavenPluginParameterDocumenter_2_2_1; inherit (callPackage ../development/java-modules/maven/plugin-registry.nix { inherit fetchMaven; }) - mavenPluginRegistry_2_0_9; + mavenPluginRegistry_2_0_6 + mavenPluginRegistry_2_0_9 + mavenPluginRegistry_2_2_1; inherit (callPackage ../development/java-modules/maven/profile.nix { inherit fetchMaven; }) - mavenProfile_2_0_9; + mavenProfile_2_0_6 + mavenProfile_2_0_9 + mavenProfile_2_2_1; inherit (callPackage ../development/java-modules/maven/project.nix { inherit fetchMaven; }) + mavenProject_2_0_6 mavenProject_2_0_9; inherit (callPackage ../development/java-modules/maven/reporting-api.nix { inherit fetchMaven; }) + mavenReportingApi_2_0_6 mavenReportingApi_2_0_9; inherit (callPackage ../development/java-modules/maven/repository-metadata.nix { inherit fetchMaven; }) - mavenRepositoryMetadata_2_0_9; + mavenRepositoryMetadata_2_0_6 + mavenRepositoryMetadata_2_0_9 + mavenRepositoryMetadata_2_2_1; inherit (callPackage ../development/java-modules/maven/settings.nix { inherit fetchMaven; }) - mavenSettings_2_0_9; + mavenSettings_2_0_6 + mavenSettings_2_0_9 + mavenSettings_2_2_1; + + inherit (callPackage ../development/java-modules/maven/shared-incremental.nix { inherit fetchMaven; }) + mavenSharedIncremental_1_1; + + inherit (callPackage ../development/java-modules/maven/shared-utils.nix { inherit fetchMaven; }) + mavenSharedUtils_0_1; + + inherit (callPackage ../development/java-modules/maven/surefire-api.nix { inherit fetchMaven; }) + mavenSurefireApi_2_12_4; + + inherit (callPackage ../development/java-modules/maven/surefire-booter.nix { inherit fetchMaven; }) + mavenSurefireBooter_2_12_4; + + inherit (callPackage ../development/java-modules/maven/surefire-common.nix { inherit fetchMaven; }) + mavenSurefireCommon_2_12_4; + + inherit (callPackage ../development/java-modules/maven/toolchain.nix { inherit fetchMaven; }) + mavenToolchain_1_0 + mavenToolchain_2_0_9; + + inherit (callPackage ../development/java-modules/plexus/build-api.nix { inherit fetchMaven; }) + plexusBuildApi_0_0_4; + + inherit (callPackage ../development/java-modules/plexus/compiler-api.nix { inherit fetchMaven; }) + plexusCompilerApi_2_2; inherit (callPackage ../development/java-modules/plexus/component-annotations.nix { inherit fetchMaven; }) plexusComponentAnnotations_1_5_5; @@ -105,9 +174,14 @@ in { inherit (callPackage ../development/java-modules/plexus/interactivity-api.nix { inherit fetchMaven; }) plexusInteractivityApi_1_0_alpha4; + inherit (callPackage ../development/java-modules/plexus/interpolation.nix { inherit fetchMaven; }) + plexusInterpolation_1_13; + inherit (callPackage ../development/java-modules/plexus/utils.nix { inherit fetchMaven; }) plexusUtils_1_1 + plexusUtils_1_5_1 plexusUtils_1_5_8 + plexusUtils_2_0_5 plexusUtils_2_0_6 plexusUtils_3_0; } From f23c44516cfa19fe19cf9764b47d9a520a73853a Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Mon, 31 Oct 2016 10:23:22 -0400 Subject: [PATCH 004/216] Fixup --- .../java-modules/build-maven-package.nix | 6 +- .../java-modules/maven-minimal.nix | 138 ++++++++++++++++++ .../java-modules/maven/plugin-annotations.nix | 2 +- .../java-modules/maven/surefire-api.nix | 4 +- .../development/java-modules/mavenPlugins.nix | 136 +---------------- pkgs/development/java-modules/poms.nix | 16 ++ 6 files changed, 164 insertions(+), 138 deletions(-) create mode 100644 pkgs/development/java-modules/maven-minimal.nix diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index 499a48b2228..9449e3e17b1 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -4,10 +4,12 @@ with builtins; with lib; -stdenv.mkDerivation rec { +let + mavenMinimal = import ./maven-minimal.nix { inherit pkgs lib stdenv maven; }; +in stdenv.mkDerivation rec { inherit mavenDeps src name meta m2Path; - flatDeps = unique (flatten (mavenDeps ++ pkgs.javaPackages.mavenPlugins.mavenMinimal)); + flatDeps = unique (flatten (mavenDeps ++ mavenMinimal.mavenMinimal)); propagatedBuildInput = [ maven ] ++ flatDeps; diff --git a/pkgs/development/java-modules/maven-minimal.nix b/pkgs/development/java-modules/maven-minimal.nix new file mode 100644 index 00000000000..e97a97b69ea --- /dev/null +++ b/pkgs/development/java-modules/maven-minimal.nix @@ -0,0 +1,138 @@ +{ stdenv, pkgs, lib, maven }: + +with pkgs.javaPackages; + +let + fetchMaven = pkgs.callPackage ./m2install.nix { }; + poms = import ./poms.nix { inherit fetchMaven; }; + plugins = import ./mavenPlugins.nix { inherit stdenv lib pkgs maven; }; +in rec { +# "Minimal" + mavenMinimal = lib.flatten + (with plugins; [ + classworlds_1_1 + commonsCli_1_0 + findbugsJsr305_2_0_1 + junit_3_8_1 + mavenArchiver_2_5 + mavenArtifact_2_0_6 + mavenArtifact_2_0_9 + mavenArtifactManager_2_0_6 + mavenArtifactManager_2_0_9 + mavenArtifactManager_2_2_1 + mavenClean_2_5 + mavenCompiler_3_1 + mavenCore_2_0_6 + mavenCore_2_0_9 + mavenCore_2_2_1 + mavenDoxiaSinkApi_1_0_alpha7 + mavenErrorDiagnostics_2_0_6 + mavenErrorDiagnostics_2_0_9 + mavenErrorDiagnostics_2_2_1 + mavenFiltering_1_1 + mavenInstall_2_4 + mavenJar_2_4 + mavenModel_2_0_6 + mavenModel_2_0_9 + mavenModel_2_2_1 + mavenMonitor_2_0_6 + mavenMonitor_2_0_9 + mavenMonitor_2_2_1 + mavenPluginDescriptor_2_0_6 + mavenPluginDescriptor_2_0_9 + mavenPluginDescriptor_2_2_1 + mavenPluginParameterDocumenter_2_0_6 + mavenPluginParameterDocumenter_2_0_9 + mavenPluginParameterDocumenter_2_2_1 + mavenProfile_2_0_6 + mavenProfile_2_0_9 + mavenProfile_2_2_1 + mavenProject_2_0_6 + mavenProject_2_0_9 + mavenPluginAnnotations_3_1 + mavenPluginApi_2_0_6 + mavenPluginApi_2_0_9 + mavenPluginApi_2_2_1 + mavenPluginRegistry_2_0_6 + mavenPluginRegistry_2_0_9 + mavenPluginRegistry_2_2_1 + mavenReportingApi_2_0_6 + mavenReportingApi_2_0_9 + mavenRepositoryMetadata_2_0_6 + mavenRepositoryMetadata_2_0_9 + mavenRepositoryMetadata_2_2_1 + mavenResources_2_6 + mavenSettings_2_0_6 + mavenSettings_2_0_9 + mavenSettings_2_2_1 + mavenSharedIncremental_1_1 + mavenSharedUtils_0_1 + mavenSurefire_2_12_4 + mavenSurefireApi_2_12_4 + mavenSurefireBooter_2_12_4 + mavenSurefireCommon_2_12_4 + mavenToolchain_1_0 + mavenToolchain_2_0_9 + plexusBuildApi_0_0_4 + plexusCompilerApi_2_2 + plexusContainerDefault_1_0_alpha9_stable1 + plexusInteractivityApi_1_0_alpha4 + plexusInterpolation_1_13 + plexusUtils_1_5_1 + plexusUtils_2_0_5 + plexusUtils_3_0 + ]) + ++ + (with + poms; + [ + apache_3 + apache_4 + apache_5 + apache_6 + apache_9 + apache_10 + apache_11 + apache_13 + doxia_1_0_alpha7 + maven_2_0_6 + maven_2_0_9 + maven_2_2_1 + mavenParent_5 + mavenParent_8 + mavenParent_11 + mavenParent_13 + mavenParent_21 + mavenParent_22 + mavenParent_23 + mavenPlugins_22 + mavenPlugins_23 + mavenPlugins_24 + mavenPluginTools_3_1 + mavenReporting_2_0_6 + mavenReporting_2_0_9 + mavenSharedComponents_12 + mavenSharedComponents_17 + mavenSharedComponents_18 + mavenSharedComponents_19 + plexus_1_0_4 + plexus_1_0_11 + plexus_2_0_3 + plexus_2_0_6 + plexus_2_0_7 + plexus_3_3_1 + plexusCompiler_2_2 + plexusComponents_1_1_15 + plexusComponents_1_3_1 + plexusComponentAnnotations_1_5_5 + plexusContainers_1_0_3 + plexusContainers_1_5_5 + sonatypeForgeParent_3 + sonatypeForgeParent_5 + sonatypeForgeParent_10 + sonatypeSpiceParent_10 + sonatypeSpiceParent_16 + sonatypeSpiceParent_17 + surefire_2_12_4 + ]); +} diff --git a/pkgs/development/java-modules/maven/plugin-annotations.nix b/pkgs/development/java-modules/maven/plugin-annotations.nix index da7d52242a3..c00d0a4f9a2 100644 --- a/pkgs/development/java-modules/maven/plugin-annotations.nix +++ b/pkgs/development/java-modules/maven/plugin-annotations.nix @@ -1,7 +1,7 @@ { fetchMaven }: rec { - mavenPluginAnnotations = map (obj: fetchMaven { + mavenPluginAnnotations_3_1 = map (obj: fetchMaven { version = "3.1"; baseName = "maven-plugin-annotations"; package = "/org/apache/maven/plugin-tools"; diff --git a/pkgs/development/java-modules/maven/surefire-api.nix b/pkgs/development/java-modules/maven/surefire-api.nix index b696beae4c4..550490a32b1 100644 --- a/pkgs/development/java-modules/maven/surefire-api.nix +++ b/pkgs/development/java-modules/maven/surefire-api.nix @@ -1,9 +1,9 @@ { fetchMaven }: rec { - mavenSurefireBooter_2_12_4 = map (obj: fetchMaven { + mavenSurefireApi_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "maven-surefire-booter"; + baseName = "maven-surefire-api"; package = "/org/apache/maven/surefire"; sha512 = obj.sha512; type = obj.type; diff --git a/pkgs/development/java-modules/mavenPlugins.nix b/pkgs/development/java-modules/mavenPlugins.nix index 15be1594117..7c564037108 100644 --- a/pkgs/development/java-modules/mavenPlugins.nix +++ b/pkgs/development/java-modules/mavenPlugins.nix @@ -1,142 +1,12 @@ -{ pkgs, stdenv, lib, maven, fetchurl }: +{ pkgs, stdenv, lib, maven }: +with pkgs; with pkgs.javaPackages; let - mavenbuild = pkgs.callPackage ./build-maven-package.nix { }; fetchMaven = pkgs.callPackage ./m2install.nix { }; - poms = import ./poms.nix { inherit fetchMaven; }; in rec { - inherit mavenbuild fetchMaven poms; - - # "Minimal" - mavenMinimal = lib.flatten -[ -classworlds_1_1 -commonsCli_1_0 -findbugsJsr305_2_0_1 -junit_3_8_1 -mavenArchiver_2_5 -mavenArtifact_2_0_6 -mavenArtifact_2_0_9 -mavenArtifactManager_2_0_6 -mavenArtifactManager_2_0_9 -mavenArtifactManager_2_2_1 -mavenClean_2_5 -mavenCompiler_3_1 -mavenCore_2_0_6 -mavenCore_2_0_9 -mavenCore_2_2_1 -mavenDoxiaSinkApi_1_0_alpha7 -mavenErrorDiagnostics_2_0_6 -mavenErrorDiagnostics_2_0_9 -mavenErrorDiagnostics_2_2_1 -mavenFiltering_1_1 -mavenInstall_2_4 -mavenJar_2_4 -mavenModel_2_0_6 -mavenModel_2_0_9 -mavenModel_2_2_1 -mavenMonitor_2_0_6 -mavenMonitor_2_0_9 -mavenMonitor_2_2_1 -mavenPluginDescriptor_2_0_6 -mavenPluginDescriptor_2_0_9 -mavenPluginDescriptor_2_2_1 -mavenPluginParameterDocumenter_2_0_6 -mavenPluginParameterDocumenter_2_0_9 -mavenPluginParameterDocumenter_2_2_1 -mavenProfile_2_0_6 -mavenProfile_2_0_9 -mavenProfile_2_2_1 -mavenProject_2_0_6 -mavenProject_2_0_9 -mavenPluginAnnotations_3_1 -mavenPluginApi_2_0_6 -mavenPluginApi_2_0_9 -mavenPluginApi_2_2_1 -mavenPluginRegistry_2_0_6 -mavenPluginRegistry_2_0_9 -mavenPluginRegistry_2_2_1 -mavenReportingApi_2_0_6 -mavenReportingApi_2_0_9 -mavenRepositoryMetadata_2_0_6 -mavenRepositoryMetadata_2_0_9 -mavenRepositoryMetadata_2_2_1 -mavenResources_2_6 -mavenSettings_2_0_6 -mavenSettings_2_0_9 -mavenSettings_2_2_1 -mavenSharedIncremental_1_1 -mavenSharedUtils_0_1 -mavenSurefire_2_12_4 -mavenSurefireApi_2_12_4 -mavenSurefireBooter_2_12_4 -mavenSurefireCommon_2_12_4 -mavenToolchain_1_0 -mavenToolchain_2_0_9 -plexusBuildApi_0_0_4 -plexusCompilerApi_2_2 -plexusContainerDefault_1_0_alpha9_stable1 -plexusInteractivityApi_1_0_alpha4 -plexusInterpolation_1_13 -plexusUtils_1_5_1 -plexusUtils_2_0_5 -plexusUtils_3_0 -] -++ -(with -poms; -[ -apache_3 -apache_4 -apache_5 -apache_6 -apache_9 -apache_10 -apache_11 -apache_13 -doxia_1_0_alpha7 -maven_2_0_6 -maven_2_0_9 -maven_2_2_1 -mavenParent_5 -mavenParent_8 -mavenParent_11 -mavenParent_13 -mavenParent_21 -mavenParent_22 -mavenParent_23 -mavenPlugins_22 -mavenPlugins_23 -mavenPlugins_24 -mavenPluginTools_3_1 -mavenReporting_2_0_6 -mavenReporting_2_0_9 -mavenSharedComponents_12 -mavenSharedComponents_17 -mavenSharedComponents_18 -mavenSharedComponents_19 -plexus_1_0_4 -plexus_1_0_11 -plexus_2_0_3 -plexus_2_0_6 -plexus_2_0_7 -plexus_3_3_1 -plexusCompiler_2_2 -plexusComponents_1_1_15 -plexusComponents_1_3_1 -plexusComponentAnnotations_1_5_5 -plexusContainers_1_0_3 -plexusContainers_1_5_5 -sonatypeForgeParent_3 -sonatypeForgeParent_5 -sonatypeForgeParent_10 -sonatypeSpiceParent_10 -sonatypeSpiceParent_16 -sonatypeSpiceParent_17 -surefire_2_12_4 -]); + inherit fetchMaven; animalSniffer_1_11 = map (obj: fetchMaven { version = "1.11"; diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index 3e5ef87223f..18944e27a86 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -193,6 +193,22 @@ rec { type = "pom"; }; + mavenParent_11 = fetchMaven { + version = "11"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; + type = "pom"; + }; + + mavenParent_13 = fetchMaven { + version = "13"; + baseName = "maven-parent"; + package = "/org/apache/maven"; + sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; + type = "pom"; + }; + mavenParent_15 = fetchMaven { version = "15"; baseName = "maven-parent"; From 8500c2491110031e5582b014691a57b27bc6722a Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Mon, 31 Oct 2016 13:10:26 -0400 Subject: [PATCH 005/216] Finish maven-hello / framework --- .../java-modules/apache/commons-lang.nix | 11 + .../java-modules/apache/commons-lang3.nix | 14 + .../apache/commons-logging-api.nix | 14 + .../java-modules/apache/xbean-reflect.nix | 14 + .../java-modules/build-maven-package.nix | 10 +- .../java-modules/classworlds/classworlds.nix | 11 + .../java-modules/google/collections.nix | 15 + .../java-modules/hamcrest/core.nix | 1 - .../java-modules/junit/default.nix | 11 + .../java-modules/log4j/default.nix | 15 + .../java-modules/maven-minimal.nix | 305 ++++++++++-------- .../java-modules/maven/archiver.nix | 4 +- .../java-modules/maven/artifact-manager.nix | 4 +- .../java-modules/maven/artifact.nix | 11 + .../maven/common-artifact-filters.nix | 4 +- pkgs/development/java-modules/maven/core.nix | 4 +- .../java-modules/maven/error-diagnostics.nix | 4 +- pkgs/development/java-modules/maven/model.nix | 4 +- .../java-modules/maven/monitor.nix | 4 +- .../java-modules/maven/plugin-annotations.nix | 4 +- .../java-modules/maven/plugin-api.nix | 4 +- .../java-modules/maven/plugin-descriptor.nix | 4 +- .../maven/plugin-parameter-documenter.nix | 4 +- .../java-modules/maven/plugin-registry.nix | 4 +- .../java-modules/maven/profile.nix | 4 +- .../java-modules/maven/project.nix | 11 + .../maven/repository-metadata.nix | 4 +- .../java-modules/maven/settings.nix | 4 +- .../java-modules/maven/surefire-api.nix | 6 +- .../java-modules/maven/surefire-booter.nix | 6 +- .../java-modules/maven/surefire-common.nix | 4 +- .../java-modules/maven/toolchain.nix | 4 +- .../development/java-modules/mavenPlugins.nix | 2 +- .../java-modules/plexus/archiver.nix | 14 + .../java-modules/plexus/classworlds.nix | 14 + .../java-modules/plexus/compiler-javac.nix | 14 + .../java-modules/plexus/compiler-manager.nix | 14 + .../java-modules/plexus/container-default.nix | 22 ++ .../java-modules/plexus/digest.nix | 14 + .../java-modules/plexus/interpolation.nix | 33 ++ pkgs/development/java-modules/plexus/io.nix | 14 + .../development/java-modules/plexus/utils.nix | 77 +++++ pkgs/development/java-modules/poms.nix | 174 +++++++++- pkgs/top-level/java-packages.nix | 58 +++- 44 files changed, 789 insertions(+), 184 deletions(-) create mode 100644 pkgs/development/java-modules/apache/commons-lang3.nix create mode 100644 pkgs/development/java-modules/apache/commons-logging-api.nix create mode 100644 pkgs/development/java-modules/apache/xbean-reflect.nix create mode 100644 pkgs/development/java-modules/google/collections.nix create mode 100644 pkgs/development/java-modules/log4j/default.nix create mode 100644 pkgs/development/java-modules/plexus/archiver.nix create mode 100644 pkgs/development/java-modules/plexus/classworlds.nix create mode 100644 pkgs/development/java-modules/plexus/compiler-javac.nix create mode 100644 pkgs/development/java-modules/plexus/compiler-manager.nix create mode 100644 pkgs/development/java-modules/plexus/digest.nix create mode 100644 pkgs/development/java-modules/plexus/io.nix diff --git a/pkgs/development/java-modules/apache/commons-lang.nix b/pkgs/development/java-modules/apache/commons-lang.nix index eb60d19e818..8987823e470 100644 --- a/pkgs/development/java-modules/apache/commons-lang.nix +++ b/pkgs/development/java-modules/apache/commons-lang.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + commonsLang_2_1 = map (obj: fetchMaven { + version = "2.1"; + baseName = "commons-lang"; + package = "/commons-lang"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1hr3q67cn0nk5kn9vdfs8155cw814jf20jk7dsn3cn0a6l2j6dx297z6akz5f62dkkn0nj4pac7z4wvnawisnvzhpg6q6qhwj7wwc8n"; } + { type = "jar"; sha512 = "2phbi7q2k3v48gyys7s0yw8xaa9kpczwif5jfqgfarzf7il1r0vplpwgwcnlsxpifjjnap7lw0yq38zp0mbajp7h8p5z0qp7gisa4m3"; } + ]; + commonsLang_2_3 = map (obj: fetchMaven { version = "2.3"; baseName = "commons-lang"; diff --git a/pkgs/development/java-modules/apache/commons-lang3.nix b/pkgs/development/java-modules/apache/commons-lang3.nix new file mode 100644 index 00000000000..8b5498f362d --- /dev/null +++ b/pkgs/development/java-modules/apache/commons-lang3.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + commonsLang3_3_1 = map (obj: fetchMaven { + version = "3.1"; + baseName = "commons-lang3"; + package = "/org/apache/commons"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "0msypmqn5q4sxks97zbvi85rq2zclkyz8j09riqw7c95n96nyv7x3pysi83vdgc53d0lhl4apkp7warl52xq1qzdyjxipjdlhqmhdcw"; } + { type = "jar"; sha512 = "3lw2naanwxjqrwgbg5ij6abzlkch0l6bcx44sl4a59m2r5fi2rvmc07pqai2l9kqwql05fyx9h1md5jjh2wzia15rqnvwssprykjwvi"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/commons-logging-api.nix b/pkgs/development/java-modules/apache/commons-logging-api.nix new file mode 100644 index 00000000000..9aae04e4206 --- /dev/null +++ b/pkgs/development/java-modules/apache/commons-logging-api.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + commonsLoggingApi_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "commons-logging-api"; + package = "/commons-logging"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3fp3d08l6m1xmma6pz7hvkvj5isbnyjimgvxf4plrwqmalifw0ywjbal5r5kmmrdlcda7l49mxdsv43ygglm9g22dzkbhdqlhlrn934"; } + { type = "jar"; sha512 = "316dgnyhwai9n8dqjkp9chkkbhkyli9mfbgsj8ch6cdpmzmcvzirnjj7z1xbxm7v8hlybqhyaf5075pxwz3cg1w5ih3rhwjfi19f8dq"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/xbean-reflect.nix b/pkgs/development/java-modules/apache/xbean-reflect.nix new file mode 100644 index 00000000000..c1e9916443c --- /dev/null +++ b/pkgs/development/java-modules/apache/xbean-reflect.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + xbeanReflect_3_4 = map (obj: fetchMaven { + version = "3.4"; + baseName = "xbean-reflect"; + package = "/org/apache/xbean"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1nny6dcwif0kd0kr2l55j2l5rb1aw8l2f2fbhanj6j48zhcz3vv1wx5xi0l6vg4j70y12fxyg1kyn4lq0bx19by19r73k06wlxs001k"; } + { type = "jar"; sha512 = "3w22jbm4sii16lzkzwi6hv5zbid5jw8dv356q9hr0pnb8d4gm6ypl2pjqj0brzmpq9pydqya14wk798ddjalqjh25rl2ry9qhjx3hlm"; } + ]; +} diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index 9449e3e17b1..a056953f9ab 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -1,11 +1,11 @@ -{ stdenv, maven, lib, pkgs }: +{ stdenv, maven, pkgs }: { mavenDeps, src, name, meta, m2Path, ... }: with builtins; -with lib; +with stdenv.lib; let - mavenMinimal = import ./maven-minimal.nix { inherit pkgs lib stdenv maven; }; + mavenMinimal = import ./maven-minimal.nix { inherit pkgs stdenv maven; }; in stdenv.mkDerivation rec { inherit mavenDeps src name meta m2Path; @@ -16,7 +16,10 @@ in stdenv.mkDerivation rec { find = ''find ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}''; copy = ''cp -rs ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/*") flatDeps)} $out/m2''; + phases = [ "unpackPhase" "buildPhase" ]; + buildPhase = '' + mkdir -p $out/target mkdir -p $out/m2/${m2Path} ${optionalString (length flatDeps > 0) find} ${optionalString (length flatDeps > 0) copy} @@ -24,5 +27,6 @@ in stdenv.mkDerivation rec { tmpm2file://$out/m2*\ $out/m2" >> $out/m2/settings.xml ${maven}/bin/mvn clean install -Dmaven.test.skip=true -gs $out/m2/settings.xml + cp -v ./target/*.jar $out/target/ ''; } diff --git a/pkgs/development/java-modules/classworlds/classworlds.nix b/pkgs/development/java-modules/classworlds/classworlds.nix index a177927d3d6..3a85cc4363e 100644 --- a/pkgs/development/java-modules/classworlds/classworlds.nix +++ b/pkgs/development/java-modules/classworlds/classworlds.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + classworlds_1_1_alpha2 = map (obj: fetchMaven { + version = "1.1-alpha-2"; + baseName = "classworlds"; + package = "/classworlds"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "027b0s13ck41wg75z7bz1zxazdxp56llxlg4z9kp01wys1sbkng8s0i0mxyvjaq61q5lg2gfrxypnzg7vha23vq57hkdhwyksjdcd5c"; } + { type = "jar"; sha512 = "36vir8jja85cg7khaf2qjln7m8q5iq0n43vvkxkwwngv67ffpvqqz6j1fscvl16hzb0nf6j9gzkcrgk3mk9jl49vrj3fw7c173m4xzb"; } + ]; + classworlds_1_1 = map (obj: fetchMaven { version = "1.1"; baseName = "classworlds"; diff --git a/pkgs/development/java-modules/google/collections.nix b/pkgs/development/java-modules/google/collections.nix new file mode 100644 index 00000000000..9898ddeaf31 --- /dev/null +++ b/pkgs/development/java-modules/google/collections.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + googleCollections_1_0 = map (obj: fetchMaven { + version = "1.0"; + baseName = "google-collections"; + package = "/com/google/collections"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3vvgac799ilrmab28ya894jkyq3jj4217ix8mfyxzbkb8v0wy2rpmdbni3irrrdhc9skd0sldlcnfpvs1hjv5v07ajxlm1dbkgvqhap"; } + { type = "pom"; sha512 = "38x885cglwmx0chqlzhx83jcrqvnwwr9qj6awx3n0xqp175qznjwn0i94rwxhyj00a7xgvvm9jvwkppwfkcdiyxmimb1z8frdhkkh7p"; } + ]; +} + diff --git a/pkgs/development/java-modules/hamcrest/core.nix b/pkgs/development/java-modules/hamcrest/core.nix index 1414dc1fe6b..104331f6f13 100644 --- a/pkgs/development/java-modules/hamcrest/core.nix +++ b/pkgs/development/java-modules/hamcrest/core.nix @@ -1,7 +1,6 @@ { fetchMaven }: rec { - # Ant build, just fetch the binary hamcrestCore_1_3 = map (obj: fetchMaven { version = "1.3"; baseName = "hamcrest-core"; diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index ebb614bb703..8304b1a8a01 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -36,6 +36,17 @@ rec { { type = "jar"; sha512 = "25yk0lzwk46r867nhrw4hg7cvz28wb8ln9nw1dqrb6zarifl54p4h1mcz90vmih405bsk96g0qb6hn1h4df0fas3f5kma9vxfjryvwf"; } ]; + junit_3_8_2 = map (obj: fetchMaven { + version = "3.8.2"; + baseName = "junit"; + package = "/junit"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "01npyfwl1f44l44x92cvqqcp58sckcjraf78dav6zgag3x6ispd9gz594nhpqckmjw0hlrkbqfxnzdcq1mlsj9rw6zyq4wk5ch8rl5j"; } + { type = "jar"; sha512 = "2jcih102666lcm7b23rgs5cd59ww49m78c8mja52mrcm25630zw28rjqkj5lsws18k5jf75div9wkd1sxcvwvq5cvvphgyg7550i8r9"; } + ]; + junit_4_12 = junitGen { mavenDeps = [ mavenPlugins.animalSniffer_1_11 hamcrestCore_1_3 plexusUtils_1_1 ]; sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; diff --git a/pkgs/development/java-modules/log4j/default.nix b/pkgs/development/java-modules/log4j/default.nix new file mode 100644 index 00000000000..65aaa41adb1 --- /dev/null +++ b/pkgs/development/java-modules/log4j/default.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + log4j_1_2_12 = map (obj: fetchMaven { + version = "1.2.12"; + baseName = "log4j"; + package = "/log4j"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "23amz03i51w4vhh2wfq4fppi5qp2rzy0gqz4fdaqg4s3mz0aj86jylp7akj7aprnm28q2y1v4sj0s64qqvakj1vj020hr9y8rrifdga"; } + { type = "pom"; sha512 = "0n5w0ywp90lllnyyxhaa7py1gapdw85jnnyyk86rm46k132q1lq6j7rh1mvzw1z01lh7bzb800r0rmgcc1mgn3fjgr9hxlr4ssm7gbx"; } + ]; +} + diff --git a/pkgs/development/java-modules/maven-minimal.nix b/pkgs/development/java-modules/maven-minimal.nix index e97a97b69ea..359060c8dae 100644 --- a/pkgs/development/java-modules/maven-minimal.nix +++ b/pkgs/development/java-modules/maven-minimal.nix @@ -1,138 +1,187 @@ -{ stdenv, pkgs, lib, maven }: +{ stdenv, pkgs, maven }: +with stdenv.lib; with pkgs.javaPackages; let fetchMaven = pkgs.callPackage ./m2install.nix { }; poms = import ./poms.nix { inherit fetchMaven; }; - plugins = import ./mavenPlugins.nix { inherit stdenv lib pkgs maven; }; + plugins = import ./mavenPlugins.nix { inherit stdenv pkgs maven; }; in rec { -# "Minimal" - mavenMinimal = lib.flatten - (with plugins; [ - classworlds_1_1 - commonsCli_1_0 - findbugsJsr305_2_0_1 - junit_3_8_1 - mavenArchiver_2_5 - mavenArtifact_2_0_6 - mavenArtifact_2_0_9 - mavenArtifactManager_2_0_6 - mavenArtifactManager_2_0_9 - mavenArtifactManager_2_2_1 - mavenClean_2_5 - mavenCompiler_3_1 - mavenCore_2_0_6 - mavenCore_2_0_9 - mavenCore_2_2_1 - mavenDoxiaSinkApi_1_0_alpha7 - mavenErrorDiagnostics_2_0_6 - mavenErrorDiagnostics_2_0_9 - mavenErrorDiagnostics_2_2_1 - mavenFiltering_1_1 - mavenInstall_2_4 - mavenJar_2_4 - mavenModel_2_0_6 - mavenModel_2_0_9 - mavenModel_2_2_1 - mavenMonitor_2_0_6 - mavenMonitor_2_0_9 - mavenMonitor_2_2_1 - mavenPluginDescriptor_2_0_6 - mavenPluginDescriptor_2_0_9 - mavenPluginDescriptor_2_2_1 - mavenPluginParameterDocumenter_2_0_6 - mavenPluginParameterDocumenter_2_0_9 - mavenPluginParameterDocumenter_2_2_1 - mavenProfile_2_0_6 - mavenProfile_2_0_9 - mavenProfile_2_2_1 - mavenProject_2_0_6 - mavenProject_2_0_9 - mavenPluginAnnotations_3_1 - mavenPluginApi_2_0_6 - mavenPluginApi_2_0_9 - mavenPluginApi_2_2_1 - mavenPluginRegistry_2_0_6 - mavenPluginRegistry_2_0_9 - mavenPluginRegistry_2_2_1 - mavenReportingApi_2_0_6 - mavenReportingApi_2_0_9 - mavenRepositoryMetadata_2_0_6 - mavenRepositoryMetadata_2_0_9 - mavenRepositoryMetadata_2_2_1 - mavenResources_2_6 - mavenSettings_2_0_6 - mavenSettings_2_0_9 - mavenSettings_2_2_1 - mavenSharedIncremental_1_1 - mavenSharedUtils_0_1 - mavenSurefire_2_12_4 - mavenSurefireApi_2_12_4 - mavenSurefireBooter_2_12_4 - mavenSurefireCommon_2_12_4 - mavenToolchain_1_0 - mavenToolchain_2_0_9 - plexusBuildApi_0_0_4 - plexusCompilerApi_2_2 - plexusContainerDefault_1_0_alpha9_stable1 - plexusInteractivityApi_1_0_alpha4 - plexusInterpolation_1_13 - plexusUtils_1_5_1 - plexusUtils_2_0_5 - plexusUtils_3_0 - ]) - ++ - (with - poms; + # Maven needs all of these to function + mavenMinimal = flatten [ - apache_3 - apache_4 - apache_5 - apache_6 - apache_9 - apache_10 - apache_11 - apache_13 - doxia_1_0_alpha7 - maven_2_0_6 - maven_2_0_9 - maven_2_2_1 - mavenParent_5 - mavenParent_8 - mavenParent_11 - mavenParent_13 - mavenParent_21 - mavenParent_22 - mavenParent_23 - mavenPlugins_22 - mavenPlugins_23 - mavenPlugins_24 - mavenPluginTools_3_1 - mavenReporting_2_0_6 - mavenReporting_2_0_9 - mavenSharedComponents_12 - mavenSharedComponents_17 - mavenSharedComponents_18 - mavenSharedComponents_19 - plexus_1_0_4 - plexus_1_0_11 - plexus_2_0_3 - plexus_2_0_6 - plexus_2_0_7 - plexus_3_3_1 - plexusCompiler_2_2 - plexusComponents_1_1_15 - plexusComponents_1_3_1 - plexusComponentAnnotations_1_5_5 - plexusContainers_1_0_3 - plexusContainers_1_5_5 - sonatypeForgeParent_3 - sonatypeForgeParent_5 - sonatypeForgeParent_10 - sonatypeSpiceParent_10 - sonatypeSpiceParent_16 - sonatypeSpiceParent_17 - surefire_2_12_4 + classworlds_1_1_alpha2 + classworlds_1_1 + commonsCli_1_0 + commonsLang_2_1 + commonsLang3_3_1 + commonsLoggingApi_1_1 + findbugsJsr305_2_0_1 + googleCollections_1_0 + junit_3_8_1 + junit_3_8_2 + log4j_1_2_12 + mavenArchiver_2_5 + mavenArtifact_2_0_6 + mavenArtifact_2_0_9 + mavenArtifact_2_2_1 + mavenArtifactManager_2_0_6 + mavenArtifactManager_2_0_9 + mavenArtifactManager_2_2_1 + mavenCommonArtifactFilters_1_3 + mavenCore_2_0_6 + mavenCore_2_0_9 + mavenCore_2_2_1 + mavenDoxiaSinkApi_1_0_alpha7 + mavenErrorDiagnostics_2_0_6 + mavenErrorDiagnostics_2_0_9 + mavenErrorDiagnostics_2_2_1 + mavenFiltering_1_1 + mavenModel_2_0_6 + mavenModel_2_0_9 + mavenModel_2_2_1 + mavenMonitor_2_0_6 + mavenMonitor_2_0_9 + mavenMonitor_2_2_1 + mavenPluginDescriptor_2_0_6 + mavenPluginDescriptor_2_0_9 + mavenPluginDescriptor_2_2_1 + mavenPluginParameterDocumenter_2_0_6 + mavenPluginParameterDocumenter_2_0_9 + mavenPluginParameterDocumenter_2_2_1 + mavenProfile_2_0_6 + mavenProfile_2_0_9 + mavenProfile_2_2_1 + mavenProject_2_0_6 + mavenProject_2_0_9 + mavenProject_2_2_1 + mavenPluginAnnotations_3_1 + mavenPluginApi_2_0_6 + mavenPluginApi_2_0_9 + mavenPluginApi_2_2_1 + mavenPluginRegistry_2_0_6 + mavenPluginRegistry_2_0_9 + mavenPluginRegistry_2_2_1 + mavenReportingApi_2_0_6 + mavenReportingApi_2_0_9 + mavenRepositoryMetadata_2_0_6 + mavenRepositoryMetadata_2_0_9 + mavenRepositoryMetadata_2_2_1 + mavenSettings_2_0_6 + mavenSettings_2_0_9 + mavenSettings_2_2_1 + mavenSharedIncremental_1_1 + mavenSharedUtils_0_1 + mavenSurefireApi_2_12_4 + mavenSurefireBooter_2_12_4 + mavenSurefireCommon_2_12_4 + mavenToolchain_1_0 + mavenToolchain_2_0_9 + plexusArchiver_2_1 + plexusBuildApi_0_0_4 + plexusClassworlds_2_2_2 + plexusCompilerApi_2_2 + plexusCompilerJavac_2_2 + plexusCompilerManager_2_2 + plexusComponentAnnotations_1_5_5 + plexusContainerDefault_1_0_alpha9 + plexusContainerDefault_1_0_alpha9_stable1 + plexusContainerDefault_1_5_5 + plexusDigest_1_0 + plexusInteractivityApi_1_0_alpha4 + plexusInterpolation_1_11 + plexusInterpolation_1_12 + plexusInterpolation_1_13 + plexusInterpolation_1_15 + plexusIo_2_0_2 + plexusUtils_1_0_4 + plexusUtils_1_4_1 + plexusUtils_1_4_5 + plexusUtils_1_5_1 + plexusUtils_1_5_5 + plexusUtils_1_5_8 + plexusUtils_1_5_15 + plexusUtils_2_0_5 + plexusUtils_3_0 + plexusUtils_3_0_5 + plexusUtils_3_0_8 + xbeanReflect_3_4 + ] ++ (with plugins; [ + mavenClean_2_5 + mavenCompiler_3_1 + mavenInstall_2_4 + mavenJar_2_4 + mavenResources_2_6 + mavenSurefire_2_12_4 + ]) ++ (with poms; [ + apache_3 + apache_4 + apache_5 + apache_6 + apache_9 + apache_10 + apache_11 + apache_13 + backportUtilConcurrent_3_1 + commonsParent_22 + doxia_1_0_alpha7 + googleParent_1 + jclOverSlf4j_1_5_6 + maven_2_0_6 + maven_2_0_9 + maven_2_2_1 + mavenParent_5 + mavenParent_8 + mavenParent_11 + mavenParent_13 + mavenParent_21 + mavenParent_22 + mavenParent_23 + mavenPlugins_22 + mavenPlugins_23 + mavenPlugins_24 + mavenPluginTools_3_1 + mavenReporting_2_0_6 + mavenReporting_2_0_9 + mavenSharedComponents_12 + mavenSharedComponents_17 + mavenSharedComponents_18 + mavenSharedComponents_19 + plexus_1_0_4 + plexus_1_0_8 + plexus_1_0_11 + plexus_2_0_2 + plexus_2_0_3 + plexus_2_0_6 + plexus_2_0_7 + plexus_3_0_1 + plexus_3_1 + plexus_3_2 + plexus_3_3_1 + plexusCipher_1_4 + plexusCompiler_2_2 + plexusCompilers_2_2 + plexusComponents_1_1_7 + plexusComponents_1_1_14 + plexusComponents_1_1_15 + plexusComponents_1_1_19 + plexusComponents_1_3_1 + plexusContainers_1_0_3 + plexusContainers_1_5_5 + plexusSecDispatcher_1_3 + slf4jApi_1_5_6 + slf4jJdk14_1_5_6 + slf4jParent_1_5_6 + sonatypeForgeParent_3 + sonatypeForgeParent_4 + sonatypeForgeParent_5 + sonatypeForgeParent_10 + sonatypeSpiceParent_10 + sonatypeSpiceParent_12 + sonatypeSpiceParent_16 + sonatypeSpiceParent_17 + surefire_2_12_4 + xbean_3_4 ]); } diff --git a/pkgs/development/java-modules/maven/archiver.nix b/pkgs/development/java-modules/maven/archiver.nix index 790e7894bff..ecab1f1e99c 100644 --- a/pkgs/development/java-modules/maven/archiver.nix +++ b/pkgs/development/java-modules/maven/archiver.nix @@ -8,7 +8,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "3kkv5kf3k5in69aplawkr0cr2cviyjgf8k6r6qvgxk53i3jmh7qylzrwkrd9bxclkjkgyg77cffxm48qhxm9pyqncdbwjldsmmdfb4f"; } - { type = "pom"; sha512 = "37kvfxcpfajjn9lmvh5kay4y61ri1190hxxgiil8fqfvmvcm02jcqzfi4ry0nzc80g5fsarsd3s2ns2d8l0lnqjp28nn51dixm9a55w"; } + { type = "jar"; sha512 = "0wx6248rn0821nnag659mm1n77r56chgx2lr26x81l7apx4zkc2nidjzy2d73snkir98h9bmcz09wnx21pkrq8mk50x7mjgkc0yziky"; } + { type = "pom"; sha512 = "1rfnwxnk45084rdc52a17bmg8zfyylq1m38wvp956xy455abjvxpnp7il7xpkq6wv16f3bq5yx35hk1b9nycw19w6123rz4v5cs3b0b"; } ]; } diff --git a/pkgs/development/java-modules/maven/artifact-manager.nix b/pkgs/development/java-modules/maven/artifact-manager.nix index 7f0a9226e87..031bd37eb6f 100644 --- a/pkgs/development/java-modules/maven/artifact-manager.nix +++ b/pkgs/development/java-modules/maven/artifact-manager.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "1vvxf2dannx9p2qvlbmrxfni5mc0f3722p3bcdz6bk3z4dhb2hlw2wx17nvirq5r3k43azgp13mg0638saz7v1g23f07n9yzm979f0p"; } - { type = "pom"; sha512 = "2v7371gsarjb4s2bp5vclqgdg82mh7nzy7af31g9z20q2r6ndw024xa8bpcxp227yv83lpawbhq0ysg0glnw9ql54100h9hbllam0p8"; } + { type = "jar"; sha512 = "04i9c4k5diyqz8hn20sxvrqkqrxxm7wxqh7xgyk3dm1hwhrqy3h29irvpb335kp8i0sxljz2p2a9cmjpx9wyl0266bj5y313whmfkr5"; } + { type = "pom"; sha512 = "02ryc46in725q4y11l1kmy6ra01wjnfq5gqwic005wc090l2j39kn5drvn3av6g7413v9x0cksy8qcbagc2jnz6wwxn8z2g5krynw6z"; } ]; } diff --git a/pkgs/development/java-modules/maven/artifact.nix b/pkgs/development/java-modules/maven/artifact.nix index 12876f53d5a..1cbb347baf4 100644 --- a/pkgs/development/java-modules/maven/artifact.nix +++ b/pkgs/development/java-modules/maven/artifact.nix @@ -23,6 +23,17 @@ rec { { type = "pom"; sha512 = "0g0cbqihzxyaa1b0z9a7qb8lkhcm8bzxi7qnqaab2n2zaaql6jyy7cf4z4yzqw3yfj7ylqvydiwp32j2c7nqacyx0hmcydqkqg46kxv"; } ]; + mavenArtifact_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1wfffq39ay1cdzany6x0d6h7icdqrvmj4py35a8i2aw94bc8mf6cam7lf8z7jjckhrnb7yxbqz6pj8sxsgpkwnl2q4flqaczr8nnx4j"; } + { type = "pom"; sha512 = "099hkdbccd9cf6w64c37z1b2i54h4y0bfx5n56birikgy3s92rrl4x454gvw3wnrpvhkikwvdyw9dv03w40rn50kdwgy0mxc3zgs6l4"; } + ]; + mavenArtifact_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; baseName = "maven-artifact"; diff --git a/pkgs/development/java-modules/maven/common-artifact-filters.nix b/pkgs/development/java-modules/maven/common-artifact-filters.nix index e0ee7e6a59e..2b72293ac93 100644 --- a/pkgs/development/java-modules/maven/common-artifact-filters.nix +++ b/pkgs/development/java-modules/maven/common-artifact-filters.nix @@ -8,8 +8,8 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "pom"; sha512 = "21wyk4llwjyanlggy281f9n0sjshjqvd322lbhxmzn42cd9vmj0s6xih82jwqlkcxkypwymyj1gl7van55ibd98p1jjjvr93gs1cn14"; } - { type = "jar"; sha512 = "1bv4lp1a8sb79almnygiq0pmm0fdhy9pyakp6xhz91b4v1cqg03sb586yc4lg2934yv4jjbybqjbh4l0y3kgnanjbxdxdgxgyf14iif"; } + { type = "pom"; sha512 = "0kr47rinzfyir5lfzp74r6dbbrcddrxdyic7yf571jfzzlwappy77bhrdchaz3c5w94pz1vq6is6yy5nfawpgb2zr6jpi5k552cf1fz"; } + { type = "jar"; sha512 = "060siqwk0mscxznl05lzyp72hqr9jr23l3fa9k1kdyks1hghw76cp01jbfj9ijy81n62vb6am98c1695mzpgf453kw1gxp40mwv0ryh"; } ]; mavenCommonArtifactFilters_1_4 = map (obj: fetchMaven { diff --git a/pkgs/development/java-modules/maven/core.nix b/pkgs/development/java-modules/maven/core.nix index 7f186503d31..d135bd28657 100644 --- a/pkgs/development/java-modules/maven/core.nix +++ b/pkgs/development/java-modules/maven/core.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "pom"; sha512 = "1a17qcd05v08jpd9ah650kbmrdxrxjfl2jgx9fnc89x4ahzmml9fr2qal0pwnn0sw3g3j1cqbry9lwq5hzja6x779s90hqrb72s49l1"; } - { type = "jar"; sha512 = "0qp0kns07h4j7d67z0j09kjn0hwf6k6iz4vp2pmisx131f98acm516y8ca35ly7pp6zn9mdk3c4nh9c0rd7xnqvi12ijqrfvg01dri2"; } + { type = "pom"; sha512 = "3rph4ghz7y0a8a6g6h7hr470swyj99y70rwm9ccv40qjc6gxjrckgyax0ihz50x4gyihvpbz5nl046r1qdq4r57rwx0x81s4wns0vf2"; } + { type = "jar"; sha512 = "1dxfcyic0skz4pm4w5pxbvligyl9pif78lk915pdhzia16b54c65ffk832zs7d774ynjfxrgzpbicvldsdb1wmi15vfgxn421vynbjj"; } ]; } diff --git a/pkgs/development/java-modules/maven/error-diagnostics.nix b/pkgs/development/java-modules/maven/error-diagnostics.nix index c8993f1f0c9..8f3cd0a4485 100644 --- a/pkgs/development/java-modules/maven/error-diagnostics.nix +++ b/pkgs/development/java-modules/maven/error-diagnostics.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "3czdrv2s1gafclm57m5qxw3aaxrm3r3z9yggscxg60fk0hn6jlpygclghkrl2g7c8ggdqdd01y6zcj1wgzq32yp1cd4s3kakf2y25dm"; } - { type = "pom"; sha512 = "3l0cpg0ssivfnadffc68cnac65vpfpl0qa9a4ik82jxcwhfa00337jxz37vyqaqs1vjrvd2cqhmjayddwkpwc8aqnz3nr0rlqnqzm7g"; } + { type = "jar"; sha512 = "3znssb9y54405gpxmz5cmjzq0hvs3hp77vqfwnxarghsyz52cwfkjix22a3g75a5aqspxlwdgd86lsfm6qvyxzjlvlcqa1m0yrbjbr7"; } + { type = "pom"; sha512 = "39hx14ad5g3jyxbvsmx22l2g8asnax5ym3r0n5dqiqh8pk9zwy2icgsji64kcvrdx48m2dr5blhpp7r2mw4n7si0rgvmmkkpdvzm44m"; } ]; } diff --git a/pkgs/development/java-modules/maven/model.nix b/pkgs/development/java-modules/maven/model.nix index 34832c371d5..41b2458550d 100644 --- a/pkgs/development/java-modules/maven/model.nix +++ b/pkgs/development/java-modules/maven/model.nix @@ -30,8 +30,8 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "14pxgdcim20x9lisf510nazzlcjxv9fpqabkdn0d86qa7d9270m4fmya5crasx2np9h0gxl407d77vcjf99fdxizg7i32w35yljqp3z"; } - { type = "pom"; sha512 = "2vvyawhfq0gwa54ir5l2drcfxphkd47ghwgz89v3vsqgjry714vp01pa5a6yjlwfd45mknyrb71ws6dki4zjgzhdm09ck7cxg5qkpr9"; } + { type = "jar"; sha512 = "1f9ndvsxpiyybmr5p4pl0xrvxap17grad10vr0pskvx8g8phy7w7kmihhg8gd8m91nbikpaqycm54dp5xmhqzyq85dqapxbiy2m599v"; } + { type = "pom"; sha512 = "11imkxiw9wbgnv7zpghdmgpf02v668z78xr5v0cqyay88ph7wjbscwllbgx3v6rayffx64jbhlvsw97m9sdncrfih2c9wkvfp5m48kn"; } ]; mavenModel_3_0_3 = map (obj: fetchMaven { diff --git a/pkgs/development/java-modules/maven/monitor.nix b/pkgs/development/java-modules/maven/monitor.nix index f127efba210..699d34bbf93 100644 --- a/pkgs/development/java-modules/maven/monitor.nix +++ b/pkgs/development/java-modules/maven/monitor.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "2cxspfhf3sbz68y1kjqhw2lny6s1f1kf8sfad6f1qp653g4213c9yy7y3qk9szp528866vw7daa9gbymxd66k3bm09g1q4kgnkg5wn3"; } - { type = "pom"; sha512 = "0h9brjzkvxfmk549wmq4mw71yhhf1qb1diin9rnsc5nlvh189k60088b5pcc14324gffkrvdghivfy8spjci5izmay87qk7hfsg2lxc"; } + { type = "jar"; sha512 = "20yjvzy683ngrpkng4nv82vw081mwsqrmdmlsd66axj9w0sjk4s1d87d3b3jdjhqk4jn4f7vnm644awv17g9pxqvfk1shsn83lbnvi2"; } + { type = "pom"; sha512 = "1pqh6viikr8py8spmp1l55rcsqizsa1cv6kpycmpikj59bnxhd1kqj24rhn485ifam9i90w0p5yywmgg3fmvc09byfnfl5z2lf8j5dj"; } ]; } diff --git a/pkgs/development/java-modules/maven/plugin-annotations.nix b/pkgs/development/java-modules/maven/plugin-annotations.nix index c00d0a4f9a2..782e3e14100 100644 --- a/pkgs/development/java-modules/maven/plugin-annotations.nix +++ b/pkgs/development/java-modules/maven/plugin-annotations.nix @@ -8,7 +8,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "pom"; sha512 = "17zyw3j4zbg1hhj18i4q1f0r8gdxl3q9x5ksyqlyr0mrw2sadc6lvbbhyp3l7vsbddl4bgdx36gwvjp5d97gbmk1nbpi1vabadfhq76"; } - { type = "jar"; sha512 = "0rk2nzkwcrkfy3vs0zl0l2lxp3w4hkwxrypisbivv5al7sc8lbzls6jgpp3h5gx9kk4scjj24qf5vyimnbadj63rvqffg581fs2zgl9"; } + { type = "pom"; sha512 = "2q1y622vaks1y2qjbq4005jmi41hpkivsrnmkf5kr3zndz4d6ai47d90jwr70pby8xqqsj461baljcjsicl6rrbq0v9ppyryr13q828"; } + { type = "jar"; sha512 = "1jd8b32kl9kh4dxpdg5i9qf3haqc5br0mz8bl1ri4hb9qgwkzsijvx6jr7pv9zgplanwvgca3lhpgzsgs03n8jlqnbxbmgsv1pl93zb"; } ]; } diff --git a/pkgs/development/java-modules/maven/plugin-api.nix b/pkgs/development/java-modules/maven/plugin-api.nix index ed791a86955..b06b83a8e94 100644 --- a/pkgs/development/java-modules/maven/plugin-api.nix +++ b/pkgs/development/java-modules/maven/plugin-api.nix @@ -30,8 +30,8 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "pom"; sha512 = "23qj23k049jz4mp77h2wj4mnjqszb99l4xvxas93cpnbdl51a5s0d0rsg60a8zg0ic04n6fr8nig0vvmmcsggx93a96w4p3na97q30n"; } - { type = "jar"; sha512 = "0hvl32k09wr34b6v0wl27y6353mx3afsgwyfw0vpx5aa5b8wiw86vlbknh3kjl43zp2ffxq6b4c7n07jq3y2wczz08gscs5apszhj9q"; } + { type = "pom"; sha512 = "25dqpzywbqck1za612d3wqxk61lz92rsk8nvb3arfk2wafw8h5janxy831ikikk34af8wrckkrhgn8smvksj8smyqkfkr5xkga4ywbw"; } + { type = "jar"; sha512 = "18wx59j3k2pgy6i5abxpl6x2glp51jnf2w2dcx9yxfh0qx809gbkad2ikkdaihhzzvipf2ly3xhhnpj0vbkyycnahn4lvl5ahj76g4q"; } ]; mavenPluginApi_3_0_3 = map (obj: fetchMaven { diff --git a/pkgs/development/java-modules/maven/plugin-descriptor.nix b/pkgs/development/java-modules/maven/plugin-descriptor.nix index 397a7610cfe..0a60032125c 100644 --- a/pkgs/development/java-modules/maven/plugin-descriptor.nix +++ b/pkgs/development/java-modules/maven/plugin-descriptor.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "0q9jw44v1mi489bqmdvj7jpv753vdp9jzp50ky6pd912x190spkw6ccmpc87azmwsf131d4h0k0fqi6iidl9ip22a8rwaa22yq7gxi8"; } - { type = "pom"; sha512 = "0c4hrb6qhi8wxw7acyphv6l33973vhvg7vjknc3bx8bg36404ky9k78q79r3p2an2886hdfayb0l7wji86bq4q8464754gbx02ci7r8"; } + { type = "jar"; sha512 = "34pf7z07gba3a3mvn3q3324bfrlzz01ycf02a31m2daxr12427hczz3ml4jd0gjsjj36qwic89wpcb7p34px3lvgkvy1d5hz0ky6nh6"; } + { type = "pom"; sha512 = "2z3kchasac2jbw1n0zq6d5ym57yw6si7d5i7qhz81q3ripv7r19is4d459idymgcqgpdp98zaqg7dbcbz72d0p6k9g8ngaqgk2iml0x"; } ]; } diff --git a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix index 3fd437441a3..82b16e61620 100644 --- a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix +++ b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "0djr58wp7a93p96sn0k24d6liabd7a4qvsd0p7lk88ws3jwfw5bqh6d0a3fyc86fkask1wi7krrvsm7i6yiw1f1r0d6xjzj8fx5m4kz"; } - { type = "pom"; sha512 = "39mhwcxwcqgy6pk3qlabs1b8k8fqvkps6r1zb1n7phfwh4dklngyqdrxh90j3wjg3692l7as1k0439z2x124wlh6bzpv83jmx64jiyh"; } + { type = "jar"; sha512 = "3fp8c3mz9w83r497mx8lrb3lb65v9m2hrqjs2kq7hdzg99rcgwcflg3dcv5bg89xf8vhr853zm702l3s40dqq41ys69g4f1h0ksdkld"; } + { type = "pom"; sha512 = "392c3zmdvwbz7iakaf93bk82s4la0wr8dj88vz2ipsbakmvqk82hs4r6jkpx7mkl04qhrpk4n4d7gl1gllhkyqapvdddf5qvp6a6b5q"; } ]; } diff --git a/pkgs/development/java-modules/maven/plugin-registry.nix b/pkgs/development/java-modules/maven/plugin-registry.nix index 7191a377a33..547bda4fc9f 100644 --- a/pkgs/development/java-modules/maven/plugin-registry.nix +++ b/pkgs/development/java-modules/maven/plugin-registry.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "14mkwxvj0rbj28df9gjnkvr20paayqdmsg0vrzcb23d3xng3zc1fy5hvkifnp7xg73qxpdz0nij56lnnj7q2dqxcnmqvh0vslhc2xja"; } - { type = "pom"; sha512 = "0c09imgd44b3pgnj1bjak7xn2z3mpwy9nhbchagfqkicras4djmn2dqwpm1z6p1d4khwx830x9grjrw45przan8lgc7wxzkalnnaqkf"; } + { type = "jar"; sha512 = "31kbwqlcwpyvp69sp41hb86dskyr4jp9pb1b43wc23lnk0qlyc712bqrr3qbc6kbl2wfra5fhpr70nfilx6bxsz66zizgdca3pdc0z3"; } + { type = "pom"; sha512 = "2i5zj8fmfjdnjl5y91b8m5n8gyiaih4n1i6rn85plibq4n8a42kmxgphvicnn36sgrgmy7la4vrzbaigm2zci857qws52j9p16hzv9c"; } ]; } diff --git a/pkgs/development/java-modules/maven/profile.nix b/pkgs/development/java-modules/maven/profile.nix index bcaae06b1f9..d5e79d13c2c 100644 --- a/pkgs/development/java-modules/maven/profile.nix +++ b/pkgs/development/java-modules/maven/profile.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "2v315cv62k3lmi23msk5rj9bijsafcajw7053jdzzk4zv03vdpdndm5cr995azrpdcvkcdq2m8zh5pdf44nzcdf2rvpm4nxdc2wr5rl"; } - { type = "pom"; sha512 = "05iif04frjgbmg7zb3jygn9av2ja48vs2z35b2zrlmgf3s1fxqlr4wxylrrmmk8r0hvg4qmg5j0inm414n0v4ipn08hrpzik5nhdfgy"; } + { type = "jar"; sha512 = "13lgj34xf9wgwx87z5gbqmq3f3l2dqprk68ji1vig49k2ngxfa8xz3a8qh7gbl9l234gkbdl3dcsafr158bi0m3n5myrczbz0wfcia7"; } + { type = "pom"; sha512 = "0m6fqn507a36rpk0bzwv2zzl1gngcf3h4lrbw8abkmyq7npaqcg57fb5wy6cm30r2cjv2vffrdi142wjxzvrqdr08lmi5nf57gi1sng"; } ]; } diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix index 142a311feed..880f821f76c 100644 --- a/pkgs/development/java-modules/maven/project.nix +++ b/pkgs/development/java-modules/maven/project.nix @@ -22,4 +22,15 @@ rec { { type = "jar"; sha512 = "0laxsz9z48zvx27m395djfl9121jkr7amiv8n07z9nkz9i60wjl52bb7cw6hp6090ba098g8azqpnz8l5i0yj255phy1j6s92ci1i7c"; } { type = "pom"; sha512 = "047a0a2bd5fkmg70gzhdiwiwq5dmr84pz6jq9yi5fz44y57ndp7nb72fnkr0p0qcwmry3gj03hk9p2xr4ph53bl1x68j22fnv0f9krq"; } ]; + + mavenProject_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-project"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3km1j5jnkyil76817gk37ds8v69fmiz2zh924vnsv8sbaj4bm8rs7n5d5laiyss5ff0p1q9by3k1ai94lw2ambc5pbmm6lz0v71naic"; } + { type = "pom"; sha512 = "10mk142nqdaq8nqg6sf4wfaq2ymlf3fs2ay8xjrfp07l68z838b2kmj7s8lvv1qzkcnkcjrg9w2kr1m3i8bqxc68fwd5iqdq674c1p3"; } + ]; } diff --git a/pkgs/development/java-modules/maven/repository-metadata.nix b/pkgs/development/java-modules/maven/repository-metadata.nix index 7e29ada0512..7a076a3811e 100644 --- a/pkgs/development/java-modules/maven/repository-metadata.nix +++ b/pkgs/development/java-modules/maven/repository-metadata.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "2np435shcca1jka1gdjxs4bzzayfnfzncpnxhlfy59b32vfpvf5v0kca0zgyx7251ghhb2ks2xxd798rbzvr0gzivicwdrnd5x8g0hm"; } - { type = "pom"; sha512 = "27b9z80qdkn7p4fs6k87a5i926c3dsr6jmq4rz8dyiml1svqsvvghzz59cby6n8wkx7wn003wk28jzc08x53vbk5zsvcg9ckslxhjyw"; } + { type = "jar"; sha512 = "1dhyh2m8kwys6b1pqnyrn9f9a0bm93xgy9d0nyr98sq3v14irmk6kaf91rgrzrgg5b526816gb41gw1i0rdsrjdgnawlml5dm4qqc8g"; } + { type = "pom"; sha512 = "3xcvc4rsmxsxadsqczzknyrdvklizbd6wr1ldvkqx0vqwwm89k9brgkvb5bqv5i3g8s3izx1xn4g24ya88qmgr3h231wpjby2nihdvg"; } ]; } diff --git a/pkgs/development/java-modules/maven/settings.nix b/pkgs/development/java-modules/maven/settings.nix index 19f0a1ae24d..b4416607ee9 100644 --- a/pkgs/development/java-modules/maven/settings.nix +++ b/pkgs/development/java-modules/maven/settings.nix @@ -30,7 +30,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "1hy1wz2bb7f9y0rr5961zhalpbwmk0fhw49k0l527w897lz4zw7lnb8xnx530s6hmn58zqj7iwkx4spz2fahps4ss1ryk0601rzgv4a"; } - { type = "pom"; sha512 = "3i2nq3r6piwhv265jhsj9hqriw6113vkqllx5s4kd4y2dspjxh6l9xprrw347nkw68904dyq9hdx76fx2nzjd16ldh41pim5lw8r15n"; } + { type = "jar"; sha512 = "3fn6wij56cx3knhyn2w5q4bvsl6sm2ad5wxgszpp4mw5jvl5smczz3k6gpg1bnj5m9f0r9w4aahnf64qxpv4v0lv8fd6k6arwzr1lxd"; } + { type = "pom"; sha512 = "1vmbcxbrklhsyqhhz5x0skkckghi3lwgpksxi3aw0j57f86h7rk464ww1zppym451pqgqnpyvl83zzkizad5n8y8hrw41hgh1cdn3ij"; } ]; } diff --git a/pkgs/development/java-modules/maven/surefire-api.nix b/pkgs/development/java-modules/maven/surefire-api.nix index 550490a32b1..e7a561814e4 100644 --- a/pkgs/development/java-modules/maven/surefire-api.nix +++ b/pkgs/development/java-modules/maven/surefire-api.nix @@ -3,12 +3,12 @@ rec { mavenSurefireApi_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "maven-surefire-api"; + baseName = "surefire-api"; package = "/org/apache/maven/surefire"; sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } - { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + { type = "jar"; sha512 = "0chjp4jpfrhd99mpvh6v4sz71wgg8r0nyv8j2mgbsxsvbf0wha0za5g5bv16l4pflfigd4rhb2h1mkz51pb71qli8w39ycb3dw4lfpn"; } + { type = "pom"; sha512 = "28ra2n9ln8nb5j1xh6mnxc4kfabnvyqyrgy2wwm66pxhp1fxxxqz1izfvih9jzr3cps7pbvqwql770i14cfyjzvl0zccjsscsjyy50r"; } ]; } diff --git a/pkgs/development/java-modules/maven/surefire-booter.nix b/pkgs/development/java-modules/maven/surefire-booter.nix index b696beae4c4..8f4d79a9807 100644 --- a/pkgs/development/java-modules/maven/surefire-booter.nix +++ b/pkgs/development/java-modules/maven/surefire-booter.nix @@ -3,12 +3,12 @@ rec { mavenSurefireBooter_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "maven-surefire-booter"; + baseName = "surefire-booter"; package = "/org/apache/maven/surefire"; sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } - { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + { type = "jar"; sha512 = "08l0r0s1jhjdgljh26m4i612kf6wqs6g8lwx9n0cccjjzlpn3sxg7dryagwp2gz2g9y5kpdmbpsxmp5imbdak3qrwa56wxrmik16jh8"; } + { type = "pom"; sha512 = "3rj97rbbdm0m0f1cpbvw7mc9hc5jmfkqbg1w1ggr640bd8fzrgmxrcynxf440mf0wg4xy55v27g6v5c3z20zlw1h4qi500x6wfm0l5s"; } ]; } diff --git a/pkgs/development/java-modules/maven/surefire-common.nix b/pkgs/development/java-modules/maven/surefire-common.nix index 0d1bd53721c..c7bd2995c3a 100644 --- a/pkgs/development/java-modules/maven/surefire-common.nix +++ b/pkgs/development/java-modules/maven/surefire-common.nix @@ -8,7 +8,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "0xf4pb0bh2kr3qx1yqav528886fdvsb801mq22hnbs8cbaghgibcb0n8w6rbiyd59y1fmiacyhhcc18ahcxv71531m704w5gydrwx9k"; } - { type = "pom"; sha512 = "0w5ryz3kdx6c10bwhbdpic567cf1b4918anncls9gzy89lfc4lj4lnyhapv7lsfp3fzifas618m7mh4pv5gdpjbml3fgjnqcq6895g6"; } + { type = "jar"; sha512 = "3ny5b6mnmka3lzyqk03flmizj82c0hdbiqgcqxj7261pvcf2drrk85p5q2z6f2h15w60mhyvl80p39pzqa35ziqhqnp6walg7rdk0hb"; } + { type = "pom"; sha512 = "3iagspjgilwhbh5sxi64b2q8dpgrwa0s9wiw2417z2lvghy8knszha62n3j9qvbn7pxy819f2981s41aan6wcwx5scr9sg8jwbvcmff"; } ]; } diff --git a/pkgs/development/java-modules/maven/toolchain.nix b/pkgs/development/java-modules/maven/toolchain.nix index 14e6866ee32..80622361512 100644 --- a/pkgs/development/java-modules/maven/toolchain.nix +++ b/pkgs/development/java-modules/maven/toolchain.nix @@ -19,7 +19,7 @@ rec { sha512 = obj.sha512; type = obj.type; }) [ - { type = "jar"; sha512 = "34kxv3l3676ddrsj2k02f9fmphcq16avafka950d5dclrcx7w37wgxx3gcf6zfixfx9zlbb7annsa05y8f0rx97g13rkqdfdj1wknky"; } - { type = "pom"; sha512 = "0arkdm0bii7cm0g8qzzfih1jk9j7myn8w2ccr6j01wsj08gv7cbjr5k9jx1iwy1vzvhhsmsj6grq678zsgbvh4msn1s44i744x4fhvy"; } + { type = "jar"; sha512 = "37jjcjfx51bszg13wjhkv2spyw1b2n8glgyaaflzfqxmfhizr43y1fq2zhn2khp2jba6avilkqi9p0f2sd30glrg7lpc0srzqns3yn8"; } + { type = "pom"; sha512 = "1r6w6za6smam46fpdfda2612ayz4a8gm87lgwa4f5jp5k92mzaj22rcsxlnibzly19vrgvycci63w9rgmzkwi2zvxxwxmf8sc5542c7"; } ]; } diff --git a/pkgs/development/java-modules/mavenPlugins.nix b/pkgs/development/java-modules/mavenPlugins.nix index 7c564037108..5cd022b6837 100644 --- a/pkgs/development/java-modules/mavenPlugins.nix +++ b/pkgs/development/java-modules/mavenPlugins.nix @@ -1,4 +1,4 @@ -{ pkgs, stdenv, lib, maven }: +{ pkgs, stdenv, maven }: with pkgs; with pkgs.javaPackages; diff --git a/pkgs/development/java-modules/plexus/archiver.nix b/pkgs/development/java-modules/plexus/archiver.nix new file mode 100644 index 00000000000..e831df44732 --- /dev/null +++ b/pkgs/development/java-modules/plexus/archiver.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusArchiver_2_1 = map (obj: fetchMaven { + version = "2.1"; + baseName = "plexus-archiver"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xwsvld0s5p4abk5ain2ya3zbz97bkk8vzjdrmfrly3mwfbxp7lyjhshxqnr58m7kan6l0vygv7lsnyfg0yyxmnj8f5nwvssgxm1izx"; } + { type = "pom"; sha512 = "3rrwjlrwsl9ba7dyf5vp5r1pfvfmk4vwwpyq52yrmrv22djlh4dmbh1r97aizmrf17qbs7995vmcxs83ybpc62263dgxx1qa7c85hy1"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/classworlds.nix b/pkgs/development/java-modules/plexus/classworlds.nix new file mode 100644 index 00000000000..44b5ff3441a --- /dev/null +++ b/pkgs/development/java-modules/plexus/classworlds.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusClassworlds_2_2_2 = map (obj: fetchMaven { + version = "2.2.2"; + baseName = "plexus-classworlds"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0w6mhv2xjafqr45zx5fwm8iyp8kabrdvyx91qxwy04k71ah6zxzqx1l8ppq7xma4r40lpp98valr1ydgfm1cay87j1kbdgaw2j48vns"; } + { type = "pom"; sha512 = "12kxa236gg61gs6cshgwnsj0yfpywcb606j10l9hflp951vxvlcwpcdh1nlpir0zyqj7rnk5g8609grwahq2m62fs1ymqp8db2rqi56"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/compiler-javac.nix b/pkgs/development/java-modules/plexus/compiler-javac.nix new file mode 100644 index 00000000000..e3f4defd97a --- /dev/null +++ b/pkgs/development/java-modules/plexus/compiler-javac.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusCompilerJavac_2_2 = map (obj: fetchMaven { + version = "2.2"; + baseName = "plexus-compiler-javac"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "12xsiaqd1q6mmmkcsxf4nr4wdjl8fa1nwz32yqwrrbj9cgakph0368cnk1apjzngsmnl6bws87nlxcz64sg0rb7i2vdzggplj0a41br"; } + { type = "pom"; sha512 = "1fv2ij4h9xmzv3f5mvs0ilhkw7khkw5v8n1d97a2canfn254fipz7pd9nkmkqzjvy3cqwiczyh2nzibvcii624p8ggwl4s3yjw92jx4"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/compiler-manager.nix b/pkgs/development/java-modules/plexus/compiler-manager.nix new file mode 100644 index 00000000000..0675fff5004 --- /dev/null +++ b/pkgs/development/java-modules/plexus/compiler-manager.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusCompilerManager_2_2 = map (obj: fetchMaven { + version = "2.2"; + baseName = "plexus-compiler-manager"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1r1sdj784x4zcnkaz840vsz36jn1p2j98c21nia56kcdl1njydjn714bsmdy816l6sdinkz4s196mm3hshmxhq8mkmf16wgxx8jnq94"; } + { type = "pom"; sha512 = "3cpfnbgil6g0bgq0cjbq2ysfjdpl05fh72d9l9cnwbilcsaxcmzn1hgmmkvam2ih222nl82dy7n5020is3y05kiv0i4n4lcs5m0ia48"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/container-default.nix b/pkgs/development/java-modules/plexus/container-default.nix index a720c06a186..4b9949f3eb3 100644 --- a/pkgs/development/java-modules/plexus/container-default.nix +++ b/pkgs/development/java-modules/plexus/container-default.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + plexusContainerDefault_1_0_alpha9 = map (obj: fetchMaven { + version = "1.0-alpha-9"; + baseName = "plexus-container-default"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2niq80yyq5kaq4qbmqsbibz9i1b6xqrfwy6iabddx9lwacsrq3a1qwh1ih877vk6dcgq8gbi0ahx19x95vwvbpp7449ja4wml5xmag2"; } + { type = "pom"; sha512 = "144xr23kq2ljhzzvac6w2s120s96jfaccaishb9lqmrx0a8gkq949ccyf3qmv6srryflsqc0sksl7rr3294iwjgwj04xidhd8c5jycd"; } + ]; + plexusContainerDefault_1_0_alpha9_stable1 = map (obj: fetchMaven { version = "1.0-alpha-9-stable-1"; baseName = "plexus-container-default"; @@ -11,4 +22,15 @@ rec { { type = "jar"; sha512 = "1dpzdijx7xb3kgv2ybias3shzvpsq82w6x1ig5gdkg0i47m6a1ld53bi3gjczdpn88xparp80jkqlacjb65764v05ps6zg0v3vr1dkw"; } { type = "pom"; sha512 = "1gnm9ivwrkr3aqpnmdl34hkx53189wxj9acp2fms8inhznrxqcyyk355gpgzwvs9qpgdis1q88mj1fy3x1v3ffa3b6wi758p95q79jc"; } ]; + + plexusContainerDefault_1_5_5 = map (obj: fetchMaven { + version = "1.5.5"; + baseName = "plexus-container-default"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3f6qyisir3k7aa627fqh0q98zvfc4hz8xq1rzjgqjhgv34m2x8kgwfxvlcik5v7724gjj41vjvs909xw7l0v80ryhvl95r35ndqzvzy"; } + { type = "pom"; sha512 = "2axphhx8xiii80gbf9gmm6qrm6m4ws4fbdcmghzfsn1yvmmjsj7x1c15g5mkq0lhh0skscibqifsxh44qix21qfkxr532681jh5qq5h"; } + ]; } diff --git a/pkgs/development/java-modules/plexus/digest.nix b/pkgs/development/java-modules/plexus/digest.nix new file mode 100644 index 00000000000..8bd73891779 --- /dev/null +++ b/pkgs/development/java-modules/plexus/digest.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusDigest_1_0 = map (obj: fetchMaven { + version = "1.0"; + baseName = "plexus-digest"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0r343fhzhfdnavsjbl7jnxgdw64wsfzyk4q7l3m7s5wx3b8mxnizyg1r4fwb59bd8w8hw6x8l0nxrk16a9hnkhrdmnc01hyb3ra7irk"; } + { type = "pom"; sha512 = "1z7nqj2qa82g8dgd4jzmankz3hkh4r8y1q0abd37kwsx54ij681d46z916w009mq232jharynypg3682ds47jxxnqsmpm9k22i7fgib"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/interpolation.nix b/pkgs/development/java-modules/plexus/interpolation.nix index 17660f0804c..2d08495532d 100644 --- a/pkgs/development/java-modules/plexus/interpolation.nix +++ b/pkgs/development/java-modules/plexus/interpolation.nix @@ -1,6 +1,28 @@ { fetchMaven }: rec { + plexusInterpolation_1_11 = map (obj: fetchMaven { + version = "1.11"; + baseName = "plexus-interpolation"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "064lk1i6x9jj0yaiw2j1738652mxwi6qavagi364dj0pyg65pp875hs6qv1kc4gpzk60ksr99mg49mhb216p0lim83xshrxqj9i5j2w"; } + { type = "pom"; sha512 = "2laqd4iv9mj4r7kdm0zyc07pyi04p1svb27fdzm2w4y3kmi4z5h2cg39rpn6slf8wmfnk3zlcj3w662sm1fy47qzdjwkkjil0fgv3m3"; } + ]; + + plexusInterpolation_1_12 = map (obj: fetchMaven { + version = "1.12"; + baseName = "plexus-interpolation"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "239qj01vsvn7rxm67z15lgc4nc6lqas3fkxx8an5dddzsdjh7vm99ya576abwzngcm4ckz5d0dk7qx9rgsz6b9rwjq3zvqahmaw2h7a"; } + { type = "pom"; sha512 = "1jpkc2q1i325vscq9ryww1ip7vgpbzcwv23ks18b33gdxpkw25kfzncpcnpdg9fy5jn60fb6jhngxz9mkxnzyl0p3sfkkarwcmcx881"; } + ]; + plexusInterpolation_1_13 = map (obj: fetchMaven { version = "1.13"; baseName = "plexus-interpolation"; @@ -11,4 +33,15 @@ rec { { type = "jar"; sha512 = "0sm1kaxsvn8007br7nr9ncjppmfkp8nzr6ipwwx86idai9bqcsm4kh2scxf893s4jf2ii7f5106dd5w4h7bw67csalhqqzi1zpndbk4"; } { type = "pom"; sha512 = "3hlv9l82yxjbnaf2vqq6p3w38jq2id15a2yjg6wj810fl2286zz5ci3g3x7x0z0xdrxrrfvswns92v25197vpg0dki113lwdbw4bsvr"; } ]; + + plexusInterpolation_1_15 = map (obj: fetchMaven { + version = "1.15"; + baseName = "plexus-interpolation"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0a3bvnmawbnqyva73pcz6mwwd9qsy2hrhjn708qmcplv7n21h06qyvzm5advlrrbqf7k55140vdh6nzvzlwvbw3ksbchdh4r85a9i4j"; } + { type = "pom"; sha512 = "20z12w94g7pdmps9k3in3wmhirbz1qpgymfjpr5zx66kdiarj32b2akz28f5gr037zr3k3v366v3k3l694dx42rqhhwmalralybsj6a"; } + ]; } diff --git a/pkgs/development/java-modules/plexus/io.nix b/pkgs/development/java-modules/plexus/io.nix new file mode 100644 index 00000000000..1b17ae3c2ca --- /dev/null +++ b/pkgs/development/java-modules/plexus/io.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + plexusIo_2_0_2 = map (obj: fetchMaven { + version = "2.0.2"; + baseName = "plexus-io"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1z1il2fj5vr20g4aadwc0wkx117gffh8ql38i6ww5ldv9lppq81wmbsngj9vw434viy1rjifmwrx0ia3k66plqi3w63x86igq7ka0hk"; } + { type = "pom"; sha512 = "3wlqpr3b8gw9kphnqkwbxmd5pmis9wkp31biqaa6qmib31k3az6qk81fd8bwr6ifpki11fabawzbmg0dnabxig8svg6c49ydgjm3p8p"; } + ]; +} diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix index 17dc1acdf1f..137ac01c02d 100644 --- a/pkgs/development/java-modules/plexus/utils.nix +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + plexusUtils_1_0_4 = map (obj: fetchMaven { + version = "1.0.4"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3bk54p57k27fy0gdqbagscp0qqhpb116ds8jw9vcqncl3x31xs1fp0d59pjylc62h9r9g4jp068v0b116n00ljrfjfsnvnknnnlahmd"; } + { type = "pom"; sha512 = "35mm9fkfw1wljabr4lz6l5mq3mxgl7k87whlcz5qlddsbxy0j69j4xgf1fvjlyp06nqq2wz574v54aqpxgp8s6jwjyz9wyvqvsyka8d"; } + ]; + plexusUtils_1_1 = map (obj: fetchMaven { version = "1.1"; baseName = "plexus-utils"; @@ -12,6 +23,28 @@ rec { { type = "pom"; sha512 = "0vbzdfsdcc4cq7hdqzb1vdfxp23vnavq7z4qmmlb4d4fiqj5wqdgagrs43gl7yzca2azpyj3kyxgaipimi7gck07jcsz0pzljkplk4w"; } ]; + plexusUtils_1_4_1 = map (obj: fetchMaven { + version = "1.4.1"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "33b5mg4y3a57dfh41v2wimmvc9fqqh8dhihyd1hqg0lif40nnfc7yhypj1lr2ik95vd1vn6jghv0fi4pkzkbr7vb463gl6kz4yra2fk"; } + { type = "pom"; sha512 = "00h4r4l6isrks402minrpmm0shx8mxhkc31dbfcm86r220vl0bbgxw9mfqqc2ldjh7wkwcd0xp236kxwphxcrajiayxgvp7xgqnvfvb"; } + ]; + + plexusUtils_1_4_5 = map (obj: fetchMaven { + version = "1.4.5"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1f20xhp8jnkc70fy6b0fbhb16pvbwp83k4dwwar4r5570yn24j09iqlk8bhz6ra8pnkh0jz0idg61wrlz9mghzbmgdn6f2dj25dzr8s"; } + { type = "pom"; sha512 = "0liqhpc9pn81vn04qz4j3101jc33hygb415jnwpf0dhph3jay88l49gd9s1bwq6x4npn2v6863vidb8hdh5f8wd20k6m1lqhdpv882j"; } + ]; + plexusUtils_1_5_1 = map (obj: fetchMaven { version = "1.5.1"; baseName = "plexus-utils"; @@ -23,6 +56,17 @@ rec { { type = "pom"; sha512 = "161cdrgjrw2cab4lf189hwa4s1lh42fsahjcjkir696sx0m9bmmxgjbhwxl1l8kpaxn5p6jf701bx16gry393pws636vy59nvnnx1sw"; } ]; + plexusUtils_1_5_5 = map (obj: fetchMaven { + version = "1.5.5"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1ygv6mcv07kb0z8hrg98xg0sr0qqyf1v3snki6j3pn8wwn5bl46j8l70c7bpcv2jf623jn7g8gbkvjl9m04v23v3jlcc106cicbgx3v"; } + { type = "pom"; sha512 = "29knasqhkvjif27gm3ycqhc206ycgc9920mccw7biybxmiqqajyfvv74f02sqpavlk5h6l45cfb20bmldwfznvzz9bw4zhvc12s9y5h"; } + ]; + plexusUtils_1_5_8 = map (obj: fetchMaven { version = "1.5.8"; baseName = "plexus-utils"; @@ -34,6 +78,17 @@ rec { { type = "pom"; sha512 = "06z4gkq3bh2pwyj8pvaly9fihd8gbgcqp3jxl05vkj2rcdb4jw3lw3hwn8f8ggqi17i2fdm8cbndkqgr9vdgiz45p8f1nx8kjlqikbi"; } ]; + plexusUtils_1_5_15 = map (obj: fetchMaven { + version = "1.5.15"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0sya2d7nml8is8dfykyg7va1556ldnxxr90xynq9w5ghw8w8zz69hjhy5al91m4if11kc64d4ysssqqs6s83lxs75c0kipr4byn90gc"; } + { type = "pom"; sha512 = "3ax5sy7x5l7c3qxj4vn4fyak0s6d7m2hbv2r79z5mr7hf0wp29jvg9jjlb8x6mdrg9q0i363j32b4mrvbxcdq7i128sqgc80c5jczdk"; } + ]; + plexusUtils_2_0_5 = map (obj: fetchMaven { version = "2.0.5"; baseName = "plexus-utils"; @@ -66,4 +121,26 @@ rec { { type = "jar"; sha512 = "16m1khf9fafb9f79rbz93qgc35d8605v1qbs4ywnj4sk00d00d6n1649cc9rv593r8ghwd0rkz345z7wb00fagdr9af5h8h5w5blsa1"; } { type = "pom"; sha512 = "123fsmm1jvy571yl1s3wp7yd5k52nfjqxzqpzx2940rsigm35rw2mx1g4bvr3wx0gv5bqlfmqj5cwdhhxdq5vzrax8z5vbmdg5vb77r"; } ]; + + plexusUtils_3_0_5 = map (obj: fetchMaven { + version = "3.0.5"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2b7l2xwn606nn227fiqg47y4cda6apr4nv618f5swjnsji0gifw4dz4a9xyb7p0iy27igkj0j2l6kp3y4fc0vhvi7wn07zfcckswiyf"; } + { type = "pom"; sha512 = "264k562pvd1cyh5danf56iyay1a661d15rywwq12fd3v8k7p85kl9b9ykqa5hssqkkixrv4gmhy6nkk5dhy5whbmlan99h6w6q0pjyw"; } + ]; + + plexusUtils_3_0_8 = map (obj: fetchMaven { + version = "3.0.8"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3745x0zvidknkzsl4p049c0qj0iv19ga9x9mfskl93r97nx7ip6qnwa9a0v9y3s5sy2klhlfg5dyyjnhr822529cv1p2dhlh46brknn"; } + { type = "pom"; sha512 = "1p1l437rwpxv9jfygr25b455xymqcmm4smin1bf7fzcmgkc3m7k0gdd7rfvfg2622070rmwjbk4fgv0z3alf1xz03ksjp6s0gr6sqr8"; } + ]; } diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index 18944e27a86..2b3f2861399 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -37,7 +37,7 @@ rec { version = "5"; baseName = "apache"; package = "/org/apache"; - sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; + sha512 = "11l6b46mwm404vahylssab5mj4a1fw3zrjhsz3mcj5x3awnqa03131j8phias2n0rppn53xcg2p2xgr9mbp7llwabwx8jm0kz2mpgh0"; type = "pom"; }; @@ -53,7 +53,7 @@ rec { version = "9"; baseName = "apache"; package = "/org/apache"; - sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; + sha512 = "0wak95l7zlizrildiji9763zzs10dmhflxaqzg8r9qw2j8a20f2nmns03skvd8na2p12zzvrxa15p952gdfkvrynmvcv2vi1qz822g9"; type = "pom"; }; @@ -81,6 +81,14 @@ rec { type = "pom"; }; + backportUtilConcurrent_3_1 = fetchMaven { + version = "3.1"; + baseName = "backport-util-concurrent"; + package = "/backport-util-concurrent"; + sha512 = "38i04cb0dggdjjsvl32wpxfbczl1d696nlpzissjlq9ya197rwa0g0704p7vz71xsylvpdjssb0cyx916xsigcyb95k8c84b2hmdhvr"; + type = "pom"; + }; + beanshell_2_0_b4 = fetchMaven { version = "2.0b4"; baseName = "beanshell"; @@ -97,6 +105,14 @@ rec { type = "pom"; }; + commonsParent_22 = fetchMaven { + version = "22"; + baseName = "commons-parent"; + package = "/org/apache/commons"; + sha512 = "1sm8g7iwyc5gi4w73yx3p1f1l81kw8d5wzqzqgdgy7k7hfvmsxlm5r9n99h9r0g5y494ad46hjzf8cwjf8am4rv0qzhrmsqkxyd24wk"; + type = "pom"; + }; + doxia_1_0_alpha7 = fetchMaven { version = "1.0-alpha-7"; baseName = "doxia"; @@ -129,6 +145,14 @@ rec { type = "pom"; }; + googleParent_1 = fetchMaven { + version = "1"; + baseName = "google"; + package = "/com/google"; + sha512 = "22whj7li6dvh4xjcdx1hwlh13ar8c8d9snal6ynnbsd566n9g0kif2fx75q5j4kwmqzb2yj3c3vxdfzg82650gkyvjm2x6cb35vdi30"; + type = "pom"; + }; + hamcrestParent_1_3 = fetchMaven { version = "1.3"; baseName = "hamcrest-parent"; @@ -137,6 +161,14 @@ rec { type = "pom"; }; + jclOverSlf4j_1_5_6 = fetchMaven { + version = "1.5.6"; + baseName = "jcl-over-slf4j"; + package = "/org/slf4j"; + sha512 = "3ync9p7ws4p8p494jifarwpqblmbkkl6r6rw4bms8fk6ija0ifxn6q5za3pxvp690p5lzw2zkgidr51rqxk8w1ms69pb1nib1r4j578"; + type = "pom"; + }; + maven_2_0_6 = fetchMaven { version = "2.0.6"; baseName = "maven"; @@ -157,7 +189,7 @@ rec { version = "2.2.1"; baseName = "maven"; package = "/org/apache/maven"; - sha512 = "2b3wfqxbg0v2lm82a7nzw8wzw708isfrnzriy90bk89dhnj59qzpgvwrjbhs26a32gnpii5ivivh1msq51k1b7j5knmyf0hi1v0blw0"; + sha512 = "1bdf85rb7b3dvw9gjv376pk908jgvb35hs8p6fp4pzp19pj71150if09lmhw07gvy7sdd92daw7jmijmi1f9w4gxhkbqhvzkb7qx1rs"; type = "pom"; }; @@ -197,7 +229,7 @@ rec { version = "11"; baseName = "maven-parent"; package = "/org/apache/maven"; - sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; + sha512 = "21lz2qb0sl9akirk7fcbj7ldfgnq5nqy90s3hfvmfvz2spk1ppa5yq3702m7z72l3jpbm9vrcm4dvarar314lwjp3477p558gwcpkqf"; type = "pom"; }; @@ -205,7 +237,7 @@ rec { version = "13"; baseName = "maven-parent"; package = "/org/apache/maven"; - sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; + sha512 = "0vgjwpmnvcjfif84s5x19ixlxg4413mfma9f10v7klv88b08vwvkpwjnffgzrlqvp5524d8zyswshqkwpdqb0klgppxiipd52d546vw"; type = "pom"; }; @@ -269,7 +301,7 @@ rec { version = "3.1"; baseName = "maven-plugin-tools"; package = "/org/apache/maven/plugin-tools"; - sha512 = "07flf37pkkc34466bnzi4rfwdlgvd3ydasm39qzy2hybxv26306zrhipglmgsjvd84z07dscij4n7qdd2jkx9hrkm900hid4xwvxzrs"; + sha512 = "2410rvvhnpwdg67slwb05v7vnpbvq00d36mbsc77parw4v9n3sr1hqai803g8q54lzv05zzcm7knkjv5ip5wcbvzrh0dr4f5lm904wy"; type = "pom"; }; @@ -293,7 +325,7 @@ rec { version = "12"; baseName = "maven-shared-components"; package = "/org/apache/maven/shared"; - sha512 = "3f2pifiapx09h3wv9lglm0mkd9gid268lfz27jhqb4ck2yxna31872db7cj5c9lsg0pl2l3bwgp526whq14zj2qffqxrdq8mn9m0rhy"; + sha512 = "1x5q96gigd54qp60i20kvmwi604ga55fc70gkz1nwn5fjmy36rlxldhhdij3kcpnxpwqp4dwxq717ai8rqv3lzjif8pxd06wzmz0q09"; type = "pom"; }; @@ -337,6 +369,14 @@ rec { type = "pom"; }; + plexus_1_0_8 = fetchMaven { + version = "1.0.8"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "1nwv49smddfvqn1fhi8aj993pkzsxa033a9g97z7sc3aia5wzwz86azzyrklgxywc26c3k3mw8vfzv758rv3v7cn0hfmyfzfkrg8vwp"; + type = "pom"; + }; + plexus_1_0_11 = fetchMaven { version = "1.0.11"; baseName = "plexus"; @@ -377,6 +417,30 @@ rec { type = "pom"; }; + plexus_3_0_1 = fetchMaven { + version = "3.0.1"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "3rjh4msw1qjpj0vmc90f89zjkzcyahzh93jrpw25qb2wn0v18jgw65g0ai7ynssdh113kxi816syqcw8vbqwvhlr2b0acrmszy0jnps"; + type = "pom"; + }; + + plexus_3_1 = fetchMaven { + version = "3.1"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "1zyyzy6zvf73bnv8c76x2lmffllqqrgk1k8kpravcrd809acfslip1w7w8kr0rg3sc7554875wsq8fbhq3zdvxwjpzwgz4l5rjr3lmr"; + type = "pom"; + }; + + plexus_3_2 = fetchMaven { + version = "3.2"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "07y1vwz55l9yzfhix5w5fw5xvdj854c1ri1wws6r23xzyp5bqwrrz0x5ln26w05w78vpj1rvrq1mkk192vfr80si3ccr063aschf6ld"; + type = "pom"; + }; + plexus_3_3_1 = fetchMaven { version = "3.3.1"; baseName = "plexus"; @@ -385,6 +449,14 @@ rec { type = "pom"; }; + plexusCipher_1_4 = fetchMaven { + version = "1.4"; + baseName = "plexus-cipher"; + package = "/org/sonatype/plexus"; + sha512 = "1m4f7n6ch8gbwgvz7h8iab0jkan8ws3qq9776qc10k0kj6i3227kskk5s8pxlq9vrxw498jmjnkiga41fy33khrgvsvls2hrj9vv1g1"; + type = "pom"; + }; + plexusCompiler_2_2 = fetchMaven { version = "2.2"; baseName = "plexus-compiler"; @@ -393,6 +465,14 @@ rec { type = "pom"; }; + plexusCompilers_2_2 = fetchMaven { + version = "2.2"; + baseName = "plexus-compilers"; + package = "/org/codehaus/plexus"; + sha512 = "0yvvc8mdz1vd7mpw9h568mhlfxh3qpbz4qpyr5iw7f5ifm46gxsmnfd36ah6mn9hxh6lpra3mi536y5cv1k5mrbr128a1lwyr8p14rg"; + type = "pom"; + }; + plexusComponents_1_1_4 = fetchMaven { version = "1.1.4"; baseName = "plexus-components"; @@ -401,6 +481,22 @@ rec { type = "pom"; }; + plexusComponents_1_1_7 = fetchMaven { + version = "1.1.7"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "2mh1qfbaf6f6nv0nj0g8skgv82jv1l2zg7iivd2jjrzrwnpkc58ajfl1wmylwpz035d9dd713h9szkwy2hdd6pardbc4ja2w4qv5s91"; + type = "pom"; + }; + + plexusComponents_1_1_14 = fetchMaven { + version = "1.1.14"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "2gf578c23wz38cnjnp8w80b6hzmfnzrv6is1yf52qrfcijk84fnj4k8wrqg0jms9yz6l5rkkv40zm2j7kkbxgn862mnh4i4qxcb604g"; + type = "pom"; + }; + plexusComponents_1_1_15 = fetchMaven { version = "1.1.15"; baseName = "plexus-components"; @@ -409,6 +505,14 @@ rec { type = "pom"; }; + plexusComponents_1_1_19 = fetchMaven { + version = "1.1.19"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "01mllmbwfrimvsgmc3wfxp60nm999xa4abp0ywpxdrvbb88dwr4g7sg3mlz22xhc8pky72mif882ppgrdxj01lx3lmm84p3g5f51bii"; + type = "pom"; + }; + plexusComponents_1_3_1 = fetchMaven { version = "1.3.1"; baseName = "plexus-components"; @@ -433,6 +537,38 @@ rec { type = "pom"; }; + plexusSecDispatcher_1_3 = fetchMaven { + version = "1.3"; + baseName = "plexus-sec-dispatcher"; + package = "/org/sonatype/plexus"; + sha512 = "09blh68dwrh3zix33cbfbvmxbbm7ck80pwp9x4v1ilf11y6hgm065jx39viqm0zlr86kwngrlm4skrgjw5v67aj2q7d7kd5jgj5s0qc"; + type = "pom"; + }; + + slf4jApi_1_5_6 = fetchMaven { + version = "1.5.6"; + baseName = "slf4j-api"; + package = "/org/slf4j"; + sha512 = "3ahxd5zfxpwrp97yq74xfhrh02a7hnmcdxk5rwjn4v5hcms9b98iizsgd2ssjxa1vy784jh45f6k8qby1c1bdcwk9y18mkcw79zhl2n"; + type = "pom"; + }; + + slf4jJdk14_1_5_6 = fetchMaven { + version = "1.5.6"; + baseName = "slf4j-jdk14"; + package = "/org/slf4j"; + sha512 = "11yiy09mlm5dq2ir05n97nka3sqwn48k47x4d2vqmgjsk3vz255m8ilxvq5hjjzygyw0prcrp4zbwkphb5his00pw8f4hczd1w16nvr"; + type = "pom"; + }; + + slf4jParent_1_5_6 = fetchMaven { + version = "1.5.6"; + baseName = "slf4j-parent"; + package = "/org/slf4j"; + sha512 = "036cizr5vh557l65jiv706iiy1q1s3lkr1xqa1hd5yspawd111d5iq8q3qdsw07c3rmxq7n9sflgcj08bhs149ni119fdr7hn9cx0nl"; + type = "pom"; + }; + sonatypeForgeParent_3 = fetchMaven { version = "3"; baseName = "forge-parent"; @@ -441,6 +577,14 @@ rec { type = "pom"; }; + sonatypeForgeParent_4 = fetchMaven { + version = "4"; + baseName = "forge-parent"; + package = "/org/sonatype/forge"; + sha512 = "0j13rfddklh25sdwppxvdn97y3l8vy809g2w5zpflh74v0rh0q04ylm3j2nj5hf3ypmgx3lhdp161jbv3l47gl7gh60fk3rnq17kfbq"; + type = "pom"; + }; + sonatypeForgeParent_5 = fetchMaven { version = "5"; baseName = "forge-parent"; @@ -473,6 +617,14 @@ rec { type = "pom"; }; + sonatypeSpiceParent_12 = fetchMaven { + version = "12"; + baseName = "spice-parent"; + package = "/org/sonatype/spice"; + sha512 = "3bx63k5frr99ma5wcjlqlym7qr6x1m031hns35rpvz039s9cxcn8r3f7slwqaa7s19i3j46kwgxirnhs4ylcddql4rsibaqjwy9lh0d"; + type = "pom"; + }; + sonatypeSpiceParent_16 = fetchMaven { version = "16"; baseName = "spice-parent"; @@ -504,4 +656,12 @@ rec { sha512 = "3yraw37xwayyrvwa62y6li3wbzrha08j389psz16j1dawxmg78zlm2x1jmgz3nzdb60n9kk143606bgs3vrf7ri9d5pwkg9lvw7hk92"; type = "pom"; }; + + xbean_3_4 = fetchMaven { + version = "3.4"; + baseName = "xbean"; + package = "/org/apache/xbean"; + sha512 = "2qdd1srj7ahskmxp1cb3gkxgdmy0ms4m5mi43mvfrl085fp58f67ip2y0w4r0xfwzds12727yili6hciiwix9i6hx7wasi5sa9djcp6"; + type = "pom"; + }; } diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix index a777d57ec2c..fac982b5be2 100644 --- a/pkgs/top-level/java-packages.nix +++ b/pkgs/top-level/java-packages.nix @@ -17,30 +17,46 @@ in { bsh_2_0_b4; inherit (callPackage ../development/java-modules/classworlds/classworlds.nix { inherit fetchMaven; }) + classworlds_1_1_alpha2 classworlds_1_1; inherit (callPackage ../development/java-modules/apache/commons-cli.nix { inherit fetchMaven; }) commonsCli_1_0; inherit (callPackage ../development/java-modules/apache/commons-lang.nix { inherit fetchMaven; }) + commonsLang_2_1 commonsLang_2_3; + inherit (callPackage ../development/java-modules/apache/commons-lang3.nix { inherit fetchMaven; }) + commonsLang3_3_1; + + inherit (callPackage ../development/java-modules/apache/commons-logging-api.nix { inherit fetchMaven; }) + commonsLoggingApi_1_1; + inherit (callPackage ../development/java-modules/findbugs/jsr305.nix { inherit fetchMaven; }) findbugsJsr305_2_0_1; + inherit (callPackage ../development/java-modules/google/collections.nix { inherit fetchMaven; }) + googleCollections_1_0; + inherit (callPackage ../development/java-modules/hamcrest/core.nix { inherit fetchMaven; }) hamcrestCore_1_3; inherit (callPackage ../development/java-modules/junit { inherit mavenbuild fetchMaven; }) junit_3_8_1 + junit_3_8_2 junit_4_12; + inherit (callPackage ../development/java-modules/log4j { inherit fetchMaven; }) + log4j_1_2_12; + inherit (callPackage ../development/java-modules/maven/archiver.nix { inherit fetchMaven; }) mavenArchiver_2_5; inherit (callPackage ../development/java-modules/maven/artifact.nix { inherit fetchMaven; }) mavenArtifact_2_0_6 mavenArtifact_2_0_9 + mavenArtifact_2_2_1 mavenArtifact_3_0_3; inherit (callPackage ../development/java-modules/maven/artifact-manager.nix { inherit fetchMaven; }) @@ -121,7 +137,8 @@ in { inherit (callPackage ../development/java-modules/maven/project.nix { inherit fetchMaven; }) mavenProject_2_0_6 - mavenProject_2_0_9; + mavenProject_2_0_9 + mavenProject_2_2_1; inherit (callPackage ../development/java-modules/maven/reporting-api.nix { inherit fetchMaven; }) mavenReportingApi_2_0_6 @@ -156,17 +173,34 @@ in { mavenToolchain_1_0 mavenToolchain_2_0_9; + inherit (callPackage ../development/java-modules/plexus/archiver.nix { inherit fetchMaven; }) + plexusArchiver_2_1; + inherit (callPackage ../development/java-modules/plexus/build-api.nix { inherit fetchMaven; }) plexusBuildApi_0_0_4; + inherit (callPackage ../development/java-modules/plexus/classworlds.nix { inherit fetchMaven; }) + plexusClassworlds_2_2_2; + inherit (callPackage ../development/java-modules/plexus/compiler-api.nix { inherit fetchMaven; }) plexusCompilerApi_2_2; + inherit (callPackage ../development/java-modules/plexus/compiler-javac.nix { inherit fetchMaven; }) + plexusCompilerJavac_2_2; + + inherit (callPackage ../development/java-modules/plexus/compiler-manager.nix { inherit fetchMaven; }) + plexusCompilerManager_2_2; + inherit (callPackage ../development/java-modules/plexus/component-annotations.nix { inherit fetchMaven; }) plexusComponentAnnotations_1_5_5; inherit (callPackage ../development/java-modules/plexus/container-default.nix { inherit fetchMaven; }) - plexusContainerDefault_1_0_alpha9_stable1; + plexusContainerDefault_1_0_alpha9 + plexusContainerDefault_1_0_alpha9_stable1 + plexusContainerDefault_1_5_5; + + inherit (callPackage ../development/java-modules/plexus/digest.nix { inherit fetchMaven; }) + plexusDigest_1_0; inherit (callPackage ../development/java-modules/plexus/i18n.nix { inherit fetchMaven; }) plexusI18n_1_0_beta6; @@ -175,13 +209,29 @@ in { plexusInteractivityApi_1_0_alpha4; inherit (callPackage ../development/java-modules/plexus/interpolation.nix { inherit fetchMaven; }) - plexusInterpolation_1_13; + plexusInterpolation_1_11 + plexusInterpolation_1_12 + plexusInterpolation_1_13 + plexusInterpolation_1_15; + + inherit (callPackage ../development/java-modules/plexus/io.nix { inherit fetchMaven; }) + plexusIo_2_0_2; inherit (callPackage ../development/java-modules/plexus/utils.nix { inherit fetchMaven; }) + plexusUtils_1_0_4 plexusUtils_1_1 + plexusUtils_1_4_1 + plexusUtils_1_4_5 plexusUtils_1_5_1 + plexusUtils_1_5_5 plexusUtils_1_5_8 + plexusUtils_1_5_15 plexusUtils_2_0_5 plexusUtils_2_0_6 - plexusUtils_3_0; + plexusUtils_3_0 + plexusUtils_3_0_5 + plexusUtils_3_0_8; + + inherit (callPackage ../development/java-modules/apache/xbean-reflect.nix { inherit fetchMaven; }) + xbeanReflect_3_4; } From 5d54cfd7a4474c952faccd24dba10844f8348778 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Mon, 31 Oct 2016 13:25:27 -0400 Subject: [PATCH 006/216] junit_4_12 part 2 --- .../java-modules/apache/ant-launcher.nix | 14 +++ pkgs/development/java-modules/apache/ant.nix | 14 +++ .../java-modules/apache/commons-io.nix | 14 +++ .../java-modules/apache/commons-lang.nix | 11 ++ .../java-modules/build-maven-package.nix | 2 +- .../java-modules/junit/default.nix | 8 +- pkgs/development/java-modules/m2install.nix | 4 +- .../maven/common-artifact-filters.nix | 11 ++ .../java-modules/maven/plugin-annotations.nix | 11 ++ .../java-modules/maven/project.nix | 11 ++ .../java-modules/maven/surefire-api.nix | 11 ++ .../java-modules/maven/surefire-booter.nix | 11 ++ .../java-modules/maven/surefire-common.nix | 11 ++ .../java-modules/maven/toolchain.nix | 11 ++ .../java-modules/mojo/animal-sniffer.nix | 15 +++ .../java-modules/plexus/classworlds.nix | 11 ++ .../development/java-modules/plexus/utils.nix | 11 ++ pkgs/development/java-modules/poms.nix | 104 ++++++++++++++++++ pkgs/development/java-modules/sisu/guice.nix | 14 +++ .../java-modules/sisu/inject-bean.nix | 14 +++ .../java-modules/sisu/inject-plexus.nix | 14 +++ pkgs/development/java-modules/xerces/impl.nix | 14 +++ .../java-modules/xml-apis/default.nix | 14 +++ pkgs/top-level/java-packages.nix | 51 +++++++-- 24 files changed, 394 insertions(+), 12 deletions(-) create mode 100644 pkgs/development/java-modules/apache/ant-launcher.nix create mode 100644 pkgs/development/java-modules/apache/ant.nix create mode 100644 pkgs/development/java-modules/apache/commons-io.nix create mode 100644 pkgs/development/java-modules/mojo/animal-sniffer.nix create mode 100644 pkgs/development/java-modules/sisu/guice.nix create mode 100644 pkgs/development/java-modules/sisu/inject-bean.nix create mode 100644 pkgs/development/java-modules/sisu/inject-plexus.nix create mode 100644 pkgs/development/java-modules/xerces/impl.nix create mode 100644 pkgs/development/java-modules/xml-apis/default.nix diff --git a/pkgs/development/java-modules/apache/ant-launcher.nix b/pkgs/development/java-modules/apache/ant-launcher.nix new file mode 100644 index 00000000000..0e4d7b26765 --- /dev/null +++ b/pkgs/development/java-modules/apache/ant-launcher.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + antLauncher_1_8_2 = map (obj: fetchMaven { + version = "1.8.2"; + baseName = "ant-launcher"; + package = "/org/apache/ant"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3h1xmlamkh39lz3dgpbyxj0mai9a266qmxkcyb7kqpzkl0xxvgyi8i2l4nnn02n4qbxznhmvsba77v52ldh67qmhxk3vw1q3xqnn2xx"; } + { type = "pom"; sha512 = "3fvz9di9lbfgy5370gwwdp2d380gl42sn44kr97l8i7k0n9crrbjrxs2dpy9cnsnnavvk14nrrkc72n9f1gkg1dvdxqpxlwm0y9lxhy"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/ant.nix b/pkgs/development/java-modules/apache/ant.nix new file mode 100644 index 00000000000..fa83663f5ec --- /dev/null +++ b/pkgs/development/java-modules/apache/ant.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + ant_1_8_2 = map (obj: fetchMaven { + version = "1.8.2"; + baseName = "ant"; + package = "/org/apache/ant"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3x9m09i4kn57avkjbz57v1chx0356lp4mz77adslcbmr59gxfs3km1f4dq3lm1nxspldwxqk654yzh5sgrcfz13r1zlg3bvlsjbb1bs"; } + { type = "pom"; sha512 = "2h8ajn6x40cn8cicx3h167blkv9p6478l610xrp2n1k1zlfnh1rz2kcsi74gy7psb4h98118p3zp90gvw4h8gsphz1n30f3c96qnpiq"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/commons-io.nix b/pkgs/development/java-modules/apache/commons-io.nix new file mode 100644 index 00000000000..612dcb85f8e --- /dev/null +++ b/pkgs/development/java-modules/apache/commons-io.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + commonsIo_2_1 = map (obj: fetchMaven { + version = "2.1"; + baseName = "commons-io"; + package = "/commons-io"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "30bzhsnn2vhi3wfmkas58spl6sxvl9rvwkzaqf9z1lr3iz4iym6x1xgspgq1dvy7pwr7ajny1dfpj1l6vzh7adqm2b4pidjf2w00fp2"; } + { type = "jar"; sha512 = "14b2kcjsn12cnrl1qc7v7r48m9vmpw5h9jljhsx58ac8xrlb8g6l71j9lnhp8cf8vc3jwz4drrwn4l9p3r5sk02cparl3h2r0y4cp2c"; } + ]; +} diff --git a/pkgs/development/java-modules/apache/commons-lang.nix b/pkgs/development/java-modules/apache/commons-lang.nix index 8987823e470..f6dc6b407ef 100644 --- a/pkgs/development/java-modules/apache/commons-lang.nix +++ b/pkgs/development/java-modules/apache/commons-lang.nix @@ -22,4 +22,15 @@ rec { { type = "pom"; sha512 = "0i94xb3fgq0ig0aids9r1h1kblhlf762gsjxh422ra23saa4474q4iywgfk596bpcflngf2sarq8ch6lw09p0g43779d23b74bd939n"; } { type = "jar"; sha512 = "1f30pryvd39m2yazflzy5l1h4l473dj8ccrd9v8z8lb6iassn4xc142f2snkzxlc7ncqsi6fbfd3zfxsy8afivmxmxds6mbsrxayqwk"; } ]; + + commonsLang_2_6 = map (obj: fetchMaven { + version = "2.6"; + baseName = "commons-lang"; + package = "/commons-lang"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "2b3yp5bawbh9b0gh56g35x03swrjv2c5jpvwjwric7ywadaf4p6cw1kmabldmi0y3rja5cypz7gfdm1pwdrpr9lmi48ijjssimmgsh1"; } + { type = "jar"; sha512 = "11gnsj6c1rz61j19wnr0j5rbdnl63hq9axwm7wwampmdq70n3m1szbn014phl8y3nccvrq2ifcgwb48q6jwqs50rki4bij196z3snja"; } + ]; } diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index a056953f9ab..203fa88aa00 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -26,7 +26,7 @@ in stdenv.mkDerivation rec { echo "\ tmpm2file://$out/m2*\ $out/m2" >> $out/m2/settings.xml - ${maven}/bin/mvn clean install -Dmaven.test.skip=true -gs $out/m2/settings.xml + ${maven}/bin/mvn clean package -Dmaven.test.skip=true -Danimal.sniffer.skip=true -gs $out/m2/settings.xml cp -v ./target/*.jar $out/target/ ''; } diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index 8304b1a8a01..5418679b78f 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -2,7 +2,9 @@ with pkgs.javaPackages; -rec { +let + poms = import (../poms.nix) { inherit fetchMaven; }; +in rec { junitGen = { mavenDeps, sha512, version }: mavenbuild rec { inherit mavenDeps sha512 version; @@ -48,7 +50,9 @@ rec { ]; junit_4_12 = junitGen { - mavenDeps = [ mavenPlugins.animalSniffer_1_11 hamcrestCore_1_3 plexusUtils_1_1 ]; + mavenDeps = (with mavenPlugins; [ animalSniffer_1_11 mavenEnforcer_1_3_1 mavenReplacer_1_5_3 mavenSurefire_2_17 ]) + ++ [ aetherUtil_0_9_0_M2 ant_1_8_2 antLauncher_1_8_2 bsh_2_0_b4 commonsIo_2_1 commonsLang_2_3 commonsLang_2_6 hamcrestCore_1_3 mavenArtifact_3_0_3 mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_4 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenModel_3_0_3 mavenPluginApi_3_0_3 mavenPluginAnnotations_3_2 mavenProject_2_0_1 mavenSurefireApi_2_17 mavenSurefireBooter_2_17 mavenSurefireCommon_2_17 mavenToolchain_2_2_1 mojoAnimalSniffer_1_11 plexusClassworlds_2_4 plexusI18n_1_0_beta6 plexusUtils_1_1 plexusUtils_1_5_6 plexusUtils_2_0_6 sisuGuice_2_9_4 sisuInjectBean_2_1_1 sisuInjectPlexus_2_1_1 xercesImpl_2_8_0 xmlApis_1_3_03 ] + ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 antParent_1_8_2 apache_1 apache_7 beanshell_2_0_b4 codehausParent_4 commonsParent_17 doxia_1_0_alpha10 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_1 maven_3_0_3 mavenParent_6 mavenParent_15 mavenPluginTools_3_2 mavenSharedComponents_11 mojoParent_32 plexus_1_0_12 plexusComponents_1_1_4 sisuInjectGuiceBean_2_1_1 sisuInject_2_1_1 sisuInjectGuicePlexus_2_1_1 sisuParent_2_1_1 sonatypeForgeParent_7 sonatypeParent_7 surefire_2_17 ]); sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; version = "4.12"; }; diff --git a/pkgs/development/java-modules/m2install.nix b/pkgs/development/java-modules/m2install.nix index 56ae8132c61..88e8efca1a1 100644 --- a/pkgs/development/java-modules/m2install.nix +++ b/pkgs/development/java-modules/m2install.nix @@ -1,10 +1,10 @@ { stdenv, fetchurl }: -{ version, baseName, package, sha512, type ? "jar" }: +{ version, baseName, package, sha512, type ? "jar", suffix ? "" }: let name = "${baseName}-${version}"; m2Path = "${package}/${baseName}/${version}"; - m2File = "${name}.${type}"; + m2File = "${name}${suffix}.${type}"; src = fetchurl rec { inherit sha512; url = "mirror://maven/${m2Path}/${m2File}"; diff --git a/pkgs/development/java-modules/maven/common-artifact-filters.nix b/pkgs/development/java-modules/maven/common-artifact-filters.nix index 2b72293ac93..3949882f98b 100644 --- a/pkgs/development/java-modules/maven/common-artifact-filters.nix +++ b/pkgs/development/java-modules/maven/common-artifact-filters.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenCommonArtifactFilters_1_2 = map (obj: fetchMaven { + version = "1.2"; + baseName = "maven-common-artifact-filters"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "33g4qwxxnwdzx8h5xh5gjx8ijy6cmc5iyv0jgn70hvz1zqnilr49ibzjnichyb3m77zma30zb1njgw7fbnlx177ph5h2w0radkh3m88"; } + { type = "jar"; sha512 = "1z55x8hrb9g4kk21jsk9n4r26ncgsxinr18nmjgxsrcbaxcjhxbhx3nin24gwvcy6zh2d6gv26dng8i90ccc1qxvpmga2ahk68jfyjk"; } + ]; + mavenCommonArtifactFilters_1_3 = map (obj: fetchMaven { version = "1.3"; baseName = "maven-common-artifact-filters"; diff --git a/pkgs/development/java-modules/maven/plugin-annotations.nix b/pkgs/development/java-modules/maven/plugin-annotations.nix index 782e3e14100..6bd8928cf0f 100644 --- a/pkgs/development/java-modules/maven/plugin-annotations.nix +++ b/pkgs/development/java-modules/maven/plugin-annotations.nix @@ -11,4 +11,15 @@ rec { { type = "pom"; sha512 = "2q1y622vaks1y2qjbq4005jmi41hpkivsrnmkf5kr3zndz4d6ai47d90jwr70pby8xqqsj461baljcjsicl6rrbq0v9ppyryr13q828"; } { type = "jar"; sha512 = "1jd8b32kl9kh4dxpdg5i9qf3haqc5br0mz8bl1ri4hb9qgwkzsijvx6jr7pv9zgplanwvgca3lhpgzsgs03n8jlqnbxbmgsv1pl93zb"; } ]; + + mavenPluginAnnotations_3_2 = map (obj: fetchMaven { + version = "3.2"; + baseName = "maven-plugin-annotations"; + package = "/org/apache/maven/plugin-tools"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "0ggvy7xhlgbpb7abc7vj0bhdqzfc6x0d4ldj7bl8qyi0qhv404qlfy4iqhn5jv3qwmj2pp9w4fa9jv5vsaz6yh8hpkzgdbpcwxdrmb9"; } + { type = "jar"; sha512 = "2j2lrm2dlikbpncz20r4yxhyi7h5dnhkxalvkih35m7fz57csbgd53whq969hixpfhyj18svd6695a3v4bfa94hg99mw78lzq8lwb37"; } + ]; } diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix index 880f821f76c..25911fcdee8 100644 --- a/pkgs/development/java-modules/maven/project.nix +++ b/pkgs/development/java-modules/maven/project.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenProject_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-project"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "09dyyxwyjlr9q65r8zh7bsf41glpqxc9b6902s2s1clrs98k672kg04vq4fn569vx6hishna3kpxk8y7q5k5zpfy3g9wqsxcxhbqznx"; } + { type = "pom"; sha512 = "2fl4dl48cni9hqx0i7arrylcs028vymvmsa0wncbsz37g2gsxq462lqqd1swhgjnjqn1g6386rh6wq6j9mhpbm8kf741aypz9sf33wm"; } + ]; + mavenProject_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-project"; diff --git a/pkgs/development/java-modules/maven/surefire-api.nix b/pkgs/development/java-modules/maven/surefire-api.nix index e7a561814e4..cd422bbb758 100644 --- a/pkgs/development/java-modules/maven/surefire-api.nix +++ b/pkgs/development/java-modules/maven/surefire-api.nix @@ -11,4 +11,15 @@ rec { { type = "jar"; sha512 = "0chjp4jpfrhd99mpvh6v4sz71wgg8r0nyv8j2mgbsxsvbf0wha0za5g5bv16l4pflfigd4rhb2h1mkz51pb71qli8w39ycb3dw4lfpn"; } { type = "pom"; sha512 = "28ra2n9ln8nb5j1xh6mnxc4kfabnvyqyrgy2wwm66pxhp1fxxxqz1izfvih9jzr3cps7pbvqwql770i14cfyjzvl0zccjsscsjyy50r"; } ]; + + mavenSurefireApi_2_17 = map (obj: fetchMaven { + version = "2.17"; + baseName = "surefire-api"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "319kkasis86cqimkvsvmry60sj9m1f8vmhawpa8a56arqxfiqifnjiqfppydzlm3hlk8m4qgx3k5s291acbrv05297db8qbcrb2n688"; } + { type = "pom"; sha512 = "0p0yc6sq26jsa19iiqy8d0mw3q0i1jmqz21m8fp855i8q07iyqbd1lmzasfdbblki52fdyk986mdw26yhznkr29hgpy8qv7f0l6a5pz"; } + ]; } diff --git a/pkgs/development/java-modules/maven/surefire-booter.nix b/pkgs/development/java-modules/maven/surefire-booter.nix index 8f4d79a9807..f7fb8068a26 100644 --- a/pkgs/development/java-modules/maven/surefire-booter.nix +++ b/pkgs/development/java-modules/maven/surefire-booter.nix @@ -11,4 +11,15 @@ rec { { type = "jar"; sha512 = "08l0r0s1jhjdgljh26m4i612kf6wqs6g8lwx9n0cccjjzlpn3sxg7dryagwp2gz2g9y5kpdmbpsxmp5imbdak3qrwa56wxrmik16jh8"; } { type = "pom"; sha512 = "3rj97rbbdm0m0f1cpbvw7mc9hc5jmfkqbg1w1ggr640bd8fzrgmxrcynxf440mf0wg4xy55v27g6v5c3z20zlw1h4qi500x6wfm0l5s"; } ]; + + mavenSurefireBooter_2_17 = map (obj: fetchMaven { + version = "2.17"; + baseName = "surefire-booter"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1x8nldyxzx56an3zskbq40i3aq4sp21jlnybmrd6pjzf4c3pgrd8qsxkvz23pxyfzvskpkgmibfpshng9qk18c5dm2h4n5sljp1ayni"; } + { type = "pom"; sha512 = "0w2ql9a70ncdvzicv0947q8jil4ksha42xxswqk1aas1bsg7qwpg8v4pih887y4zirnl861qaw6d1v09l1s3jqq7hxid0w3jxnlcasb"; } + ]; } diff --git a/pkgs/development/java-modules/maven/surefire-common.nix b/pkgs/development/java-modules/maven/surefire-common.nix index c7bd2995c3a..4e56b0c5a86 100644 --- a/pkgs/development/java-modules/maven/surefire-common.nix +++ b/pkgs/development/java-modules/maven/surefire-common.nix @@ -11,4 +11,15 @@ rec { { type = "jar"; sha512 = "3ny5b6mnmka3lzyqk03flmizj82c0hdbiqgcqxj7261pvcf2drrk85p5q2z6f2h15w60mhyvl80p39pzqa35ziqhqnp6walg7rdk0hb"; } { type = "pom"; sha512 = "3iagspjgilwhbh5sxi64b2q8dpgrwa0s9wiw2417z2lvghy8knszha62n3j9qvbn7pxy819f2981s41aan6wcwx5scr9sg8jwbvcmff"; } ]; + + mavenSurefireCommon_2_17 = map (obj: fetchMaven { + version = "2.17"; + baseName = "maven-surefire-common"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2ikw1ddnxxfglb3k4920lfr8ziav5n2wp13452bxyd1gbhpwkq0js58wy9jbhyzqgdblqhfj3syxka0mxd4vngyg4iqw3c2phslmn6i"; } + { type = "pom"; sha512 = "1l2dkbzbi80bjsh4ri6gxw84iwzsm5g6mmhrj1ndrsr66d4cg7vg5nfyqxvf7xhzwj45768y5id09r70zijliavpsxrvjq5j0g05yb6"; } + ]; } diff --git a/pkgs/development/java-modules/maven/toolchain.nix b/pkgs/development/java-modules/maven/toolchain.nix index 80622361512..97ea74a5e52 100644 --- a/pkgs/development/java-modules/maven/toolchain.nix +++ b/pkgs/development/java-modules/maven/toolchain.nix @@ -22,4 +22,15 @@ rec { { type = "jar"; sha512 = "37jjcjfx51bszg13wjhkv2spyw1b2n8glgyaaflzfqxmfhizr43y1fq2zhn2khp2jba6avilkqi9p0f2sd30glrg7lpc0srzqns3yn8"; } { type = "pom"; sha512 = "1r6w6za6smam46fpdfda2612ayz4a8gm87lgwa4f5jp5k92mzaj22rcsxlnibzly19vrgvycci63w9rgmzkwi2zvxxwxmf8sc5542c7"; } ]; + + mavenToolchain_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-toolchain"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "02ya75k4n4w62s9p5y1mq758s33s6vqcqli77hknr4wn22rr5fgaax8qscdnj90w3y6rkr6w0afiw438wr4hxwns5vp90fkzym87bp6"; } + { type = "pom"; sha512 = "1iv6k0pwyq2w5l4gfkmh818mrja0il48sajmgnpnn7ayi2238mbja07sqccm75wmzapb4039p7xq2jfp0vm41y3s00410gq3jgnf2pw"; } + ]; } diff --git a/pkgs/development/java-modules/mojo/animal-sniffer.nix b/pkgs/development/java-modules/mojo/animal-sniffer.nix new file mode 100644 index 00000000000..b6a5565f6fc --- /dev/null +++ b/pkgs/development/java-modules/mojo/animal-sniffer.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + mojoAnimalSniffer_1_11 = map (obj: fetchMaven { + version = "1.11"; + baseName = "animal-sniffer"; + package = "/org/codehaus/mojo"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "36qx2q1zaja470zj7w3ygafb5n07vb623yicgwjqf1nak7ianin5nlmh7pp2pzpdd9arvg7d005rnsn79bqmxcb6y1ihsxsh6l7bmsv"; } + { type = "pom"; sha512 = "1dp427c8vyiw255193s4m0ffag6ngqxfkj1cwl7v40p5c1bh8avxaj8cg56nn8ajp39shxr5wgwgjs7xwjz46yjnblh9pl29z58lm4i"; } + ]; +} + diff --git a/pkgs/development/java-modules/plexus/classworlds.nix b/pkgs/development/java-modules/plexus/classworlds.nix index 44b5ff3441a..308287a2904 100644 --- a/pkgs/development/java-modules/plexus/classworlds.nix +++ b/pkgs/development/java-modules/plexus/classworlds.nix @@ -11,4 +11,15 @@ rec { { type = "jar"; sha512 = "0w6mhv2xjafqr45zx5fwm8iyp8kabrdvyx91qxwy04k71ah6zxzqx1l8ppq7xma4r40lpp98valr1ydgfm1cay87j1kbdgaw2j48vns"; } { type = "pom"; sha512 = "12kxa236gg61gs6cshgwnsj0yfpywcb606j10l9hflp951vxvlcwpcdh1nlpir0zyqj7rnk5g8609grwahq2m62fs1ymqp8db2rqi56"; } ]; + + plexusClassworlds_2_4 = map (obj: fetchMaven { + version = "2.4"; + baseName = "plexus-classworlds"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1299qgrf60pz9a40wccb1376wibk99rf79x8dw9z2c97gyzxb3narkpna3fk9wqs7a89p18d2b7zi7vxr3wcdhw6n8saxggz44w9gpq"; } + { type = "pom"; sha512 = "1g2xisql030wjb8kvrfp0qcip2b4jbf4islmxa0k1fvjyrzms5babgdpx7m75g29dl8s649z8fb90wrrqc7g14y9g74lydc9i6rd2q5"; } + ]; } diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix index 137ac01c02d..2cfdd60ccae 100644 --- a/pkgs/development/java-modules/plexus/utils.nix +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -67,6 +67,17 @@ rec { { type = "pom"; sha512 = "29knasqhkvjif27gm3ycqhc206ycgc9920mccw7biybxmiqqajyfvv74f02sqpavlk5h6l45cfb20bmldwfznvzz9bw4zhvc12s9y5h"; } ]; + plexusUtils_1_5_6 = map (obj: fetchMaven { + version = "1.5.6"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "26p385szy6sphplalxc9750f29z7fnvmaz7m1fv0mx7p7qmvkk6pm5m4kl636m8jsflkfmzh4f4y5vj5vhxypfyc4pdzfsp9xyc3vwq"; } + { type = "pom"; sha512 = "261yv9sgjmslxjsfx7fj1ma53ld930qxic4br5m88wv96skyni09w2nh9sslgrmpxj3q89ykhq3fciscn40066v1qn0h0f6lbk3w68r"; } + ]; + plexusUtils_1_5_8 = map (obj: fetchMaven { version = "1.5.8"; baseName = "plexus-utils"; diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index 2b3f2861399..ee19aaf2103 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -17,6 +17,22 @@ rec { type = "pom"; }; + antParent_1_8_2 = fetchMaven { + version = "1.8.2"; + baseName = "ant-parent"; + package = "/org/apache/ant"; + sha512 = "1q560n9xbqk9qpprvm0nigd5nhm9s8m027qxjmzhay083sjrazscpaly4mzgry5lpdmr3xyhly1r1s88879y04qr5xqzqh0j45j943x"; + type = "pom"; + }; + + apache_1 = fetchMaven { + version = "1"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "0vbf7mbs61n13dmxndvzkafr0sg9p7g45ng9j1917cz8a9m4zflqf7xvpp9wfprmb4d1wd3ay2hhy9brxryqmvx41wfjlk9ahg34k0h"; + type = "pom"; + }; + apache_3 = fetchMaven { version = "3"; baseName = "apache"; @@ -49,6 +65,14 @@ rec { type = "pom"; }; + apache_7 = fetchMaven { + version = "7"; + baseName = "apache"; + package = "/org/apache"; + sha512 = "2yvwxxifqypmpgxyx10ggj6l52jnl64f9554kyfdph7z56n02bcalj3cr43m6br0as6yc67k5p23l2k3gvdr66c5dfw1l8rwhahk9lr"; + type = "pom"; + }; + apache_9 = fetchMaven { version = "9"; baseName = "apache"; @@ -105,6 +129,14 @@ rec { type = "pom"; }; + commonsParent_17 = fetchMaven { + version = "17"; + baseName = "commons-parent"; + package = "/org/apache/commons"; + sha512 = "31ijvmfj2yybfy0n4qh7ga8192wg75hs5v26vwm98hgvlppxs9irik4qlqzh4iqq0azp0xl8idz6nn6yb9vzsjxax4c3v5wyk3yvyfy"; + type = "pom"; + }; + commonsParent_22 = fetchMaven { version = "22"; baseName = "commons-parent"; @@ -169,6 +201,14 @@ rec { type = "pom"; }; + maven_2_0_1 = fetchMaven { + version = "2.0.1"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "02n3kpll7w5iqaijawmm4rzr35sbv826c9vp1fzfnrgbvpfw22yrsjv2z416pzk2qyjh3wx7pc5xxxxdchmpzcxm694vsdl67ki2rrz"; + type = "pom"; + }; + maven_2_0_6 = fetchMaven { version = "2.0.6"; baseName = "maven"; @@ -305,6 +345,14 @@ rec { type = "pom"; }; + mavenPluginTools_3_2 = fetchMaven { + version = "3.2"; + baseName = "maven-plugin-tools"; + package = "/org/apache/maven/plugin-tools"; + sha512 = "28qhbacsb69rcp86l3lkc3d83267qdwwpl0zm134rxi58wy4y4rd8nz2yzk6yx4x8h0drq776b2qnr4ps1da1ybsvsi2sc655scx3lf"; + type = "pom"; + }; + mavenReporting_2_0_6 = fetchMaven { version = "2.0.6"; baseName = "maven-reporting"; @@ -321,6 +369,14 @@ rec { type = "pom"; }; + mavenSharedComponents_11 = fetchMaven { + version = "11"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "3g30bgx3nhw1pwq5nq7ns17vs53cck3zrk6b4sqh56my7vhdv08v0n94l326q9f51sxvnsn11zmpnn8zri8hz2ci1g61ymgi2d0mxyd"; + type = "pom"; + }; + mavenSharedComponents_12 = fetchMaven { version = "12"; baseName = "maven-shared-components"; @@ -385,6 +441,14 @@ rec { type = "pom"; }; + plexus_1_0_12 = fetchMaven { + version = "1.0.12"; + baseName = "plexus"; + package = "/org/codehaus/plexus"; + sha512 = "2ckzb1z4hgmp2r61a05v3aqapkfnyfs4b7wrf60aiymrz57kliyq3nn50h7bj6ak9hlpyzxpqgqps0chzfpizr8v0abdkjmbplvw2ai"; + type = "pom"; + }; + plexus_2_0_2 = fetchMaven { version = "2.0.2"; baseName = "plexus"; @@ -545,6 +609,38 @@ rec { type = "pom"; }; + sisuInject_2_1_1 = fetchMaven { + version = "2.1.1"; + baseName = "sisu-inject"; + package = "/org/sonatype/sisu"; + sha512 = "0720p7ai7l1wqs2rfcgpvgd1rc3p2bdpp51a57jmqbgh9msr54iy0c6n0ipybd9lrl88iz4l8cc1s73qj5appf8r481bbwgv4wxi19v"; + type = "pom"; + }; + + sisuInjectGuiceBean_2_1_1 = fetchMaven { + version = "2.1.1"; + baseName = "guice-bean"; + package = "/org/sonatype/sisu/inject"; + sha512 = "2arva9197d03whnavfspz8wm7fw8iqrhacp10984lxwig221m34p5bb9vmhn8bbswf7d8whzf9q5lsq9mxbmd2c90kc1m7n7qja6qq5"; + type = "pom"; + }; + + sisuInjectGuicePlexus_2_1_1 = fetchMaven { + version = "2.1.1"; + baseName = "guice-plexus"; + package = "/org/sonatype/sisu/inject"; + sha512 = "0gspz9n6vbnlbx33xynm4sg0wxlr89i8490gcl0y0qw6mvjjqfwv1dqgncm9xp41mb21i00gxq0ml6d4wfr0sdayk9m736b826lrvq4"; + type = "pom"; + }; + + sisuParent_2_1_1 = fetchMaven { + version = "2.1.1"; + baseName = "sisu-parent"; + package = "/org/sonatype/sisu"; + sha512 = "2z006ib6azrxf5s02ixv5plc1db0rglnv2m8k4il0s144v63ay98wjxawcc1chld64iribhhby6wnlv2fxvv8sl9mr03qb2q2isflgc"; + type = "pom"; + }; + slf4jApi_1_5_6 = fetchMaven { version = "1.5.6"; baseName = "slf4j-api"; @@ -593,6 +689,14 @@ rec { type = "pom"; }; + sonatypeForgeParent_7 = fetchMaven { + version = "7"; + baseName = "forge-parent"; + package = "/org/sonatype/forge"; + sha512 = "3l6c336cm6wnrw2l7lr0wg83w1304bggvw4qydh5bqbbyfpdgwqa3pbfkq4x760k3wqwarnlpf31fz2dp6abrynjl4rr1lv68j1hhyn"; + type = "pom"; + }; + sonatypeForgeParent_10 = fetchMaven { version = "10"; baseName = "forge-parent"; diff --git a/pkgs/development/java-modules/sisu/guice.nix b/pkgs/development/java-modules/sisu/guice.nix new file mode 100644 index 00000000000..9fb70fad446 --- /dev/null +++ b/pkgs/development/java-modules/sisu/guice.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + sisuGuice_2_9_4 = map (obj: fetchMaven { + version = "2.9.4"; + baseName = "sisu-guice"; + package = "/org/sonatype/sisu"; + suffix = "-no_aop"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1529vg4r0gy3ss68lprkdf13r79r0lng4iyx68gj94cf806li9kayi9p2byl6axbx174cvam9w3l90qcdsdz14vrvm163b2r8sq927m"; } + ]; +} diff --git a/pkgs/development/java-modules/sisu/inject-bean.nix b/pkgs/development/java-modules/sisu/inject-bean.nix new file mode 100644 index 00000000000..fba7130cfbd --- /dev/null +++ b/pkgs/development/java-modules/sisu/inject-bean.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + sisuInjectBean_2_1_1 = map (obj: fetchMaven { + version = "2.1.1"; + baseName = "sisu-inject-bean"; + package = "/org/sonatype/sisu"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0cqplf149dlqyqwaqk3bjlki97fbnav57vv5d9kkd2lvdradp7k89m5niwg5qgsfdlj91zidgrrkls5vyr4dcdy3lhxs1wyr4y8r0qb"; } + { type = "pom"; sha512 = "39dwwfh1p56crmx187wbm2kskxbcr0dfysdvqiwjfx91yhh64l9672axi28hdaw1qd5dh6whzxfqqlfjac94r37wv6fq5pkx6acp2dn"; } + ]; +} diff --git a/pkgs/development/java-modules/sisu/inject-plexus.nix b/pkgs/development/java-modules/sisu/inject-plexus.nix new file mode 100644 index 00000000000..73335ec951e --- /dev/null +++ b/pkgs/development/java-modules/sisu/inject-plexus.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + sisuInjectPlexus_2_1_1 = map (obj: fetchMaven { + version = "2.1.1"; + baseName = "sisu-inject-plexus"; + package = "/org/sonatype/sisu"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0qklkc024xc58ayl6503ig1yhpsvhxk5fc9vfb7xny9v8w2ds3f9yvd275n8iyy6iza0kj8xlk0clq1i50k96j11lf401r2vcfnk69g"; } + { type = "pom"; sha512 = "1fcpyrjz82v0lncyndrw61bb1p9kxzlikiw6qk2v71zgfz2cggw694g26nxsppab2d1ps689sijb9i934vf5bpkdvkc52ipbc43jwr4"; } + ]; +} diff --git a/pkgs/development/java-modules/xerces/impl.nix b/pkgs/development/java-modules/xerces/impl.nix new file mode 100644 index 00000000000..7b04e21f50e --- /dev/null +++ b/pkgs/development/java-modules/xerces/impl.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + xercesImpl_2_8_0 = map (obj: fetchMaven { + version = "2.8.0"; + baseName = "xercesImpl"; + package = "/xerces"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "09nwhb52g4ak92l8d0aymasbgjxmk4s7vp7i55l38x21zq1plxxkdp2sdk110qyg5mw06y433v28fm867jybpca8zrx51w4g7wg0w2y"; } + { type = "pom"; sha512 = "3lv2zqm25mmirazrpp53dicd3ficy32mdr3r7bc7xhmjky2r0051vzh5k0c01rwlb4kx0rinysxw9k20ml96ivw6ipwlrvpxjwgb74f"; } + ]; +} diff --git a/pkgs/development/java-modules/xml-apis/default.nix b/pkgs/development/java-modules/xml-apis/default.nix new file mode 100644 index 00000000000..44044a35a57 --- /dev/null +++ b/pkgs/development/java-modules/xml-apis/default.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + xmlApis_1_3_03 = map (obj: fetchMaven { + version = "1.3.03"; + baseName = "xml-apis"; + package = "/xml-apis"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2sx6rm0lgzidcq1q81gnwxcj1himyny986ys6r60r3ws1p4bgxprargh5fdrmkp90djqzvy6d5b0sa0zfg1r9spynjbc8rjbr6agys9"; } + { type = "pom"; sha512 = "2n2pjaclvgllb8nzqkibvp1pida7sr9kmz0ngmsdrpk7sh5wrh32ri82gdj5l9mc1z88dwjyn1ydz6aazw36gdqqdwj3ba1mqs6pqmh"; } + ]; +} diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix index fac982b5be2..2865418eb92 100644 --- a/pkgs/top-level/java-packages.nix +++ b/pkgs/top-level/java-packages.nix @@ -13,6 +13,12 @@ in { inherit (callPackage ../development/java-modules/eclipse/aether-util.nix { inherit fetchMaven; }) aetherUtil_0_9_0_M2; + inherit (callPackage ../development/java-modules/apache/ant.nix { inherit fetchMaven; }) + ant_1_8_2; + + inherit (callPackage ../development/java-modules/apache/ant-launcher.nix { inherit fetchMaven; }) + antLauncher_1_8_2; + inherit (callPackage ../development/java-modules/beanshell/bsh.nix { inherit fetchMaven; }) bsh_2_0_b4; @@ -23,9 +29,13 @@ in { inherit (callPackage ../development/java-modules/apache/commons-cli.nix { inherit fetchMaven; }) commonsCli_1_0; + inherit (callPackage ../development/java-modules/apache/commons-io.nix { inherit fetchMaven; }) + commonsIo_2_1; + inherit (callPackage ../development/java-modules/apache/commons-lang.nix { inherit fetchMaven; }) commonsLang_2_1 - commonsLang_2_3; + commonsLang_2_3 + commonsLang_2_6; inherit (callPackage ../development/java-modules/apache/commons-lang3.nix { inherit fetchMaven; }) commonsLang3_3_1; @@ -65,6 +75,7 @@ in { mavenArtifactManager_2_2_1; inherit (callPackage ../development/java-modules/maven/common-artifact-filters.nix { inherit fetchMaven; }) + mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_3 mavenCommonArtifactFilters_1_4; @@ -107,7 +118,8 @@ in { mavenMonitor_2_2_1; inherit (callPackage ../development/java-modules/maven/plugin-annotations.nix { inherit fetchMaven; }) - mavenPluginAnnotations_3_1; + mavenPluginAnnotations_3_1 + mavenPluginAnnotations_3_2; inherit (callPackage ../development/java-modules/maven/plugin-api.nix { inherit fetchMaven; }) mavenPluginApi_2_0_6 @@ -136,6 +148,7 @@ in { mavenProfile_2_2_1; inherit (callPackage ../development/java-modules/maven/project.nix { inherit fetchMaven; }) + mavenProject_2_0_1 mavenProject_2_0_6 mavenProject_2_0_9 mavenProject_2_2_1; @@ -161,17 +174,24 @@ in { mavenSharedUtils_0_1; inherit (callPackage ../development/java-modules/maven/surefire-api.nix { inherit fetchMaven; }) - mavenSurefireApi_2_12_4; + mavenSurefireApi_2_12_4 + mavenSurefireApi_2_17; inherit (callPackage ../development/java-modules/maven/surefire-booter.nix { inherit fetchMaven; }) - mavenSurefireBooter_2_12_4; + mavenSurefireBooter_2_12_4 + mavenSurefireBooter_2_17; inherit (callPackage ../development/java-modules/maven/surefire-common.nix { inherit fetchMaven; }) - mavenSurefireCommon_2_12_4; + mavenSurefireCommon_2_12_4 + mavenSurefireCommon_2_17; inherit (callPackage ../development/java-modules/maven/toolchain.nix { inherit fetchMaven; }) mavenToolchain_1_0 - mavenToolchain_2_0_9; + mavenToolchain_2_0_9 + mavenToolchain_2_2_1; + + inherit (callPackage ../development/java-modules/mojo/animal-sniffer.nix { inherit fetchMaven; }) + mojoAnimalSniffer_1_11; inherit (callPackage ../development/java-modules/plexus/archiver.nix { inherit fetchMaven; }) plexusArchiver_2_1; @@ -180,7 +200,8 @@ in { plexusBuildApi_0_0_4; inherit (callPackage ../development/java-modules/plexus/classworlds.nix { inherit fetchMaven; }) - plexusClassworlds_2_2_2; + plexusClassworlds_2_2_2 + plexusClassworlds_2_4; inherit (callPackage ../development/java-modules/plexus/compiler-api.nix { inherit fetchMaven; }) plexusCompilerApi_2_2; @@ -224,6 +245,7 @@ in { plexusUtils_1_4_5 plexusUtils_1_5_1 plexusUtils_1_5_5 + plexusUtils_1_5_6 plexusUtils_1_5_8 plexusUtils_1_5_15 plexusUtils_2_0_5 @@ -232,6 +254,21 @@ in { plexusUtils_3_0_5 plexusUtils_3_0_8; + inherit (callPackage ../development/java-modules/sisu/guice.nix { inherit fetchMaven; }) + sisuGuice_2_9_4; + + inherit (callPackage ../development/java-modules/sisu/inject-bean.nix { inherit fetchMaven; }) + sisuInjectBean_2_1_1; + + inherit (callPackage ../development/java-modules/sisu/inject-plexus.nix { inherit fetchMaven; }) + sisuInjectPlexus_2_1_1; + inherit (callPackage ../development/java-modules/apache/xbean-reflect.nix { inherit fetchMaven; }) xbeanReflect_3_4; + + inherit (callPackage ../development/java-modules/xerces/impl.nix { inherit fetchMaven; }) + xercesImpl_2_8_0; + + inherit (callPackage ../development/java-modules/xml-apis { inherit fetchMaven; }) + xmlApis_1_3_03; } From 0e10bfa24646637e7054eb8235b260e02c6953a0 Mon Sep 17 00:00:00 2001 From: NeQuissimus Date: Mon, 14 Nov 2016 19:23:08 -0500 Subject: [PATCH 007/216] maven_hello: Add 1.1, add ability to choose skipping tests --- pkgs/development/java-modules/build-maven-package.nix | 4 ++-- pkgs/development/java-modules/maven-hello/default.nix | 11 +++++++++-- pkgs/top-level/java-packages.nix | 3 ++- 3 files changed, 13 insertions(+), 5 deletions(-) diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index 203fa88aa00..10dabadb50c 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -1,5 +1,5 @@ { stdenv, maven, pkgs }: -{ mavenDeps, src, name, meta, m2Path, ... }: +{ mavenDeps, src, name, meta, m2Path, skipTests ? true, ... }: with builtins; with stdenv.lib; @@ -26,7 +26,7 @@ in stdenv.mkDerivation rec { echo "\ tmpm2file://$out/m2*\ $out/m2" >> $out/m2/settings.xml - ${maven}/bin/mvn clean package -Dmaven.test.skip=true -Danimal.sniffer.skip=true -gs $out/m2/settings.xml + ${maven}/bin/mvn clean package -Dmaven.test.skip=${if skipTests then "true" else "false"} -Danimal.sniffer.skip=true -gs $out/m2/settings.xml cp -v ./target/*.jar $out/target/ ''; } diff --git a/pkgs/development/java-modules/maven-hello/default.nix b/pkgs/development/java-modules/maven-hello/default.nix index feb3146ffd6..a1a6cfce6b4 100644 --- a/pkgs/development/java-modules/maven-hello/default.nix +++ b/pkgs/development/java-modules/maven-hello/default.nix @@ -3,8 +3,8 @@ with pkgs.javaPackages; rec { - mavenHelloRec = { mavenDeps, sha512, version }: mavenbuild rec { - inherit mavenDeps sha512 version; + mavenHelloRec = { mavenDeps, sha512, version, skipTests }: mavenbuild rec { + inherit mavenDeps sha512 version skipTests; name = "maven-hello-${version}"; src = pkgs.fetchFromGitHub { @@ -30,4 +30,11 @@ rec { sha512 = "3kv5z1i02wfb0l5x3phbsk3qb3wky05sqn4v3y4cx56slqfp9z8j76vnh8v45ydgskwl2vs9xjx6ai8991mzb5ikvl3vdgmrj1j17p2"; version = "1.0"; }; + + mavenHello_1_1 = mavenHelloRec { + mavenDeps = [ junit_4_12 ]; + sha512 = "3dhgl5z3nzqskjjcggrjyz37r20b0m5vhfzbx382qyqcy4d2jdhkl7v1ajhcg8vkz0qdzq85k09w5is81hybv8sd09h3hgb3rrigdaq"; + version = "1.1"; + skipTests = false; + }; } diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix index 2865418eb92..488f4cb59db 100644 --- a/pkgs/top-level/java-packages.nix +++ b/pkgs/top-level/java-packages.nix @@ -104,7 +104,8 @@ in { mavenFiltering_1_1; inherit (callPackage ../development/java-modules/maven-hello { inherit mavenbuild; }) - mavenHello_1_0; + mavenHello_1_0 + mavenHello_1_1; inherit (callPackage ../development/java-modules/maven/model.nix { inherit fetchMaven; }) mavenModel_2_0_6 From 63a46e0914fb1eb40c1903998faf10ffe3383cc5 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Tue, 15 Nov 2016 14:18:19 -0500 Subject: [PATCH 008/216] Complete hello world with test --- .../java-modules/apache/commons-cli.nix | 11 +++ .../java-modules/build-maven-package.nix | 14 ++-- .../development/java-modules/hamcrest/all.nix | 15 ++++ .../java-modules/junit/default.nix | 4 +- .../java-modules/maven-hello/default.nix | 13 +-- .../java-modules/maven/artifact-manager.nix | 11 +++ .../java-modules/maven/artifact.nix | 22 +++++ pkgs/development/java-modules/maven/core.nix | 11 +++ .../java-modules/maven/doxia-sink-api.nix | 11 +++ .../java-modules/maven/error-diagnostics.nix | 11 +++ pkgs/development/java-modules/maven/model.nix | 11 +++ .../java-modules/maven/monitor.nix | 11 +++ .../java-modules/maven/plugin-api.nix | 11 +++ .../java-modules/maven/plugin-descriptor.nix | 11 +++ .../maven/plugin-parameter-documenter.nix | 11 +++ .../java-modules/maven/plugin-registry.nix | 11 +++ .../maven/plugin-testing-harness.nix | 14 ++++ .../java-modules/maven/profile.nix | 11 +++ .../java-modules/maven/project.nix | 11 +++ .../java-modules/maven/reporting-api.nix | 22 +++++ .../maven/repository-metadata.nix | 11 +++ .../java-modules/maven/settings.nix | 11 +++ .../java-modules/maven/surefire-junit4.nix | 14 ++++ .../mojo/java-boot-classpath-detector.nix | 14 ++++ pkgs/development/java-modules/ow2/asm-all.nix | 15 ++++ .../java-modules/plexus/archiver.nix | 11 +++ .../development/java-modules/plexus/utils.nix | 22 +++++ pkgs/development/java-modules/poms.nix | 80 +++++++++++++++++++ pkgs/top-level/java-packages.nix | 41 +++++++++- 29 files changed, 451 insertions(+), 15 deletions(-) create mode 100644 pkgs/development/java-modules/hamcrest/all.nix create mode 100644 pkgs/development/java-modules/maven/plugin-testing-harness.nix create mode 100644 pkgs/development/java-modules/maven/surefire-junit4.nix create mode 100644 pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix create mode 100644 pkgs/development/java-modules/ow2/asm-all.nix diff --git a/pkgs/development/java-modules/apache/commons-cli.nix b/pkgs/development/java-modules/apache/commons-cli.nix index 74087a04e0c..ffad5632b0a 100644 --- a/pkgs/development/java-modules/apache/commons-cli.nix +++ b/pkgs/development/java-modules/apache/commons-cli.nix @@ -11,4 +11,15 @@ rec { { type = "pom"; sha512 = "1pm5ba95viabcgpjhsqw21iwis9ajn8hwpyc6rzs9frr5k62hs7lj8darxmmp21hf14mxrs37a8swayhagq6i6g8js4nl4r8mmwjlvp"; } { type = "jar"; sha512 = "0ybdbpfzadkncwcmnzkscbp2fhmcsqmpy60qppz7s8hs00hgqy64jr4qpdyz5bj0l4bc434vn0pv4gzxzi7y1lhh7b2rk4zv1mgs3ff"; } ]; + + commonsCli_1_2 = map (obj: fetchMaven { + version = "1.2"; + baseName = "commons-cli"; + package = "/commons-cli"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "3lrjnrkq0vq1mjp1z6zbi6x0x45hj20yvs74aqnpzayd0prwv22hyfyadgrj343is54s6m2p5mx2kpziqz9wcih5hmwg5f80ni8mxp7"; } + { type = "jar"; sha512 = "2mdzpng0cybpnw5dw1q4dmpn2i89zhg13m8xjv8pdbn5q28zsf8m3m7w0y8irbjyplwrfdrxipkxxvnz5f61bxi4s85hnm0sc84d3qb"; } + ]; } diff --git a/pkgs/development/java-modules/build-maven-package.nix b/pkgs/development/java-modules/build-maven-package.nix index 10dabadb50c..d83b43ffd75 100644 --- a/pkgs/development/java-modules/build-maven-package.nix +++ b/pkgs/development/java-modules/build-maven-package.nix @@ -1,5 +1,5 @@ { stdenv, maven, pkgs }: -{ mavenDeps, src, name, meta, m2Path, skipTests ? true, ... }: +{ mavenDeps, src, name, meta, m2Path, skipTests ? true, quiet ? true, ... }: with builtins; with stdenv.lib; @@ -13,8 +13,8 @@ in stdenv.mkDerivation rec { propagatedBuildInput = [ maven ] ++ flatDeps; - find = ''find ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}''; - copy = ''cp -rs ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/*") flatDeps)} $out/m2''; + find = ''find ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2") flatDeps)} -type d -printf '%P\n' | xargs -I {} mkdir -p $out/m2/{}''; + copy = ''cp -rsfu ${foldl' (x: y: x + " " + y) "" (map (x: x + "/m2/*") flatDeps)} $out/m2''; phases = [ "unpackPhase" "buildPhase" ]; @@ -23,10 +23,12 @@ in stdenv.mkDerivation rec { mkdir -p $out/m2/${m2Path} ${optionalString (length flatDeps > 0) find} ${optionalString (length flatDeps > 0) copy} + if [ -f $out/m2/settings.xml ]; then rm $out/m2/settings.xml; fi echo "\ - tmpm2file://$out/m2*\ - $out/m2" >> $out/m2/settings.xml - ${maven}/bin/mvn clean package -Dmaven.test.skip=${if skipTests then "true" else "false"} -Danimal.sniffer.skip=true -gs $out/m2/settings.xml + tmpm2file://$out/m2*\ + $out/m2/" >> $out/m2/settings.xml + ${maven}/bin/mvn ${optionalString (quiet) "-q"} clean package -Dmaven.test.skip=${if skipTests then "true" else "false"} -Danimal.sniffer.skip=true -gs $out/m2/settings.xml + cp ./target/*.jar $out/m2/${m2Path} cp -v ./target/*.jar $out/target/ ''; } diff --git a/pkgs/development/java-modules/hamcrest/all.nix b/pkgs/development/java-modules/hamcrest/all.nix new file mode 100644 index 00000000000..2bba1ac9249 --- /dev/null +++ b/pkgs/development/java-modules/hamcrest/all.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + hamcrestAll_1_3 = map (obj: fetchMaven { + version = "1.3"; + baseName = "hamcrest-all"; + package = "/org/hamcrest"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3pmh19hhwr2vcvj3wqx0m8gipilny4ap9gax1xpks4k5pwykh74w0x9iwpns7cl8r7kqd6rbq4khhc0shcmfh6gydr8ax201wc7lvb8"; } + { type = "pom"; sha512 = "1w0byl3qy1gq2d8r66fzpffalc7pqm82iz5k3bqcxhclb60ifadmsxi1icqdhfpa29gvr5p1j5723zqpr11dk9w3p16njxc0arqxp2h"; } + ]; +} + diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index 5418679b78f..84ccef3975d 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -51,8 +51,8 @@ in rec { junit_4_12 = junitGen { mavenDeps = (with mavenPlugins; [ animalSniffer_1_11 mavenEnforcer_1_3_1 mavenReplacer_1_5_3 mavenSurefire_2_17 ]) - ++ [ aetherUtil_0_9_0_M2 ant_1_8_2 antLauncher_1_8_2 bsh_2_0_b4 commonsIo_2_1 commonsLang_2_3 commonsLang_2_6 hamcrestCore_1_3 mavenArtifact_3_0_3 mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_4 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenModel_3_0_3 mavenPluginApi_3_0_3 mavenPluginAnnotations_3_2 mavenProject_2_0_1 mavenSurefireApi_2_17 mavenSurefireBooter_2_17 mavenSurefireCommon_2_17 mavenToolchain_2_2_1 mojoAnimalSniffer_1_11 plexusClassworlds_2_4 plexusI18n_1_0_beta6 plexusUtils_1_1 plexusUtils_1_5_6 plexusUtils_2_0_6 sisuGuice_2_9_4 sisuInjectBean_2_1_1 sisuInjectPlexus_2_1_1 xercesImpl_2_8_0 xmlApis_1_3_03 ] - ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 antParent_1_8_2 apache_1 apache_7 beanshell_2_0_b4 codehausParent_4 commonsParent_17 doxia_1_0_alpha10 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_1 maven_3_0_3 mavenParent_6 mavenParent_15 mavenPluginTools_3_2 mavenSharedComponents_11 mojoParent_32 plexus_1_0_12 plexusComponents_1_1_4 sisuInjectGuiceBean_2_1_1 sisuInject_2_1_1 sisuInjectGuicePlexus_2_1_1 sisuParent_2_1_1 sonatypeForgeParent_7 sonatypeParent_7 surefire_2_17 ]); + ++ [ aetherUtil_0_9_0_M2 ant_1_8_2 antLauncher_1_8_2 bsh_2_0_b4 commonsCli_1_2 commonsIo_2_1 commonsLang_2_3 commonsLang_2_6 hamcrestCore_1_3 mavenArtifact_2_0_1 mavenArtifact_2_0_8 mavenArtifact_3_0_3 mavenArtifactManager_2_0_1 mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_4 mavenCore_2_0_1 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha6 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenErrorDiagnostics_2_0_1 mavenModel_2_0_1 mavenModel_3_0_3 mavenMonitor_2_0_1 mavenPluginApi_2_0_1 mavenPluginApi_3_0_3 mavenPluginAnnotations_3_2 mavenPluginDescriptor_2_0_1 mavenPluginParameterDocumenter_2_0_1 mavenPluginRegistry_2_0_1 mavenPluginTestingHarness_1_1 mavenProfile_2_0_1 mavenProject_2_0_1 mavenProject_2_0_8 mavenReportingApi_2_0_1 mavenReportingApi_2_2_1 mavenRepositoryMetadata_2_0_1 mavenSettings_2_0_1 mavenSurefireApi_2_17 mavenSurefireBooter_2_17 mavenSurefireCommon_2_17 mavenToolchain_2_2_1 mojoAnimalSniffer_1_11 mojoJavaBootClasspathDetector_1_11 ow2AsmAll_4_0 plexusArchiver_1_0_alpha7 plexusClassworlds_2_4 plexusI18n_1_0_beta6 plexusUtils_1_0_5 plexusUtils_1_1 plexusUtils_1_4_9 plexusUtils_1_5_6 plexusUtils_2_0_6 sisuGuice_2_9_4 sisuInjectBean_2_1_1 sisuInjectPlexus_2_1_1 xercesImpl_2_8_0 xmlApis_1_3_03 ] + ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 antParent_1_8_2 apache_1 apache_7 asmParent_4_0 beanshell_2_0_b4 codehausParent_4 commonsParent_11 commonsParent_17 doxia_1_0_alpha6 doxia_1_0_alpha10 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_1 maven_2_0_8 maven_3_0_3 mavenParent_6 mavenParent_15 mavenPluginTools_3_2 mavenReporting_2_0_1 mavenReporting_2_2_1 mavenSharedComponents_7 mavenSharedComponents_11 mojoParent_32 ow2_1_3 plexus_1_0_12 plexusComponents_1_1_4 plexusComponents_1_1_6 sisuInjectGuiceBean_2_1_1 sisuInject_2_1_1 sisuInjectGuicePlexus_2_1_1 sisuParent_2_1_1 sonatypeForgeParent_7 sonatypeParent_7 surefire_2_17 ]); sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; version = "4.12"; }; diff --git a/pkgs/development/java-modules/maven-hello/default.nix b/pkgs/development/java-modules/maven-hello/default.nix index a1a6cfce6b4..1ac023ec534 100644 --- a/pkgs/development/java-modules/maven-hello/default.nix +++ b/pkgs/development/java-modules/maven-hello/default.nix @@ -2,9 +2,11 @@ with pkgs.javaPackages; -rec { - mavenHelloRec = { mavenDeps, sha512, version, skipTests }: mavenbuild rec { - inherit mavenDeps sha512 version skipTests; +let + poms = import ../poms.nix { inherit fetchMaven; }; +in rec { + mavenHelloRec = { mavenDeps, sha512, version, skipTests ? true, quiet ? true }: mavenbuild rec { + inherit mavenDeps sha512 version skipTests quiet; name = "maven-hello-${version}"; src = pkgs.fetchFromGitHub { @@ -32,9 +34,10 @@ rec { }; mavenHello_1_1 = mavenHelloRec { - mavenDeps = [ junit_4_12 ]; - sha512 = "3dhgl5z3nzqskjjcggrjyz37r20b0m5vhfzbx382qyqcy4d2jdhkl7v1ajhcg8vkz0qdzq85k09w5is81hybv8sd09h3hgb3rrigdaq"; + mavenDeps = [ junit_4_12 mavenSurefireJunit4_2_12_4 hamcrestCore_1_3 ] ++ (with poms; [ surefireProviders_2_12_4 ]); + sha512 = "2f13592blvfgwad61174fza99ncb5jlch4sjjindk1pcaixqw26fnjfxb4ck80cknkihvcsylhviyfvhpm1ivvpg0zkicxva37cr4ri"; version = "1.1"; skipTests = false; + quiet = false; }; } diff --git a/pkgs/development/java-modules/maven/artifact-manager.nix b/pkgs/development/java-modules/maven/artifact-manager.nix index 031bd37eb6f..6d7e0caadfd 100644 --- a/pkgs/development/java-modules/maven/artifact-manager.nix +++ b/pkgs/development/java-modules/maven/artifact-manager.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenArtifactManager_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-artifact-manager"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0xciyvsl2l6fnd5k5dbhz5iih66fgacdagcrflk6cfiiv3qng5zrhx61v9fbjr0fpxbj7rswkczv7vn46359nlkb80513jwhzs8gqwv"; } + { type = "pom"; sha512 = "1j20ygljm0qa10ryw72j9q4jlwnsjdrcdg08a10ar456zi8gxzszp5cd0xsp0j29q69bp3wck2ggfr028v0zxivxgvakm4fa6l33sya"; } + ]; + mavenArtifactManager_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-artifact-manager"; diff --git a/pkgs/development/java-modules/maven/artifact.nix b/pkgs/development/java-modules/maven/artifact.nix index 1cbb347baf4..224570f910f 100644 --- a/pkgs/development/java-modules/maven/artifact.nix +++ b/pkgs/development/java-modules/maven/artifact.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenArtifact_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3xmim81k0p3l7fpgr8xlbj3mcz83d1rw3nwzdlrnwh3nkc5xryxl8fx499351vjlmjs009bhd68a20v59y3flxz8hxiy07cijgcbqnx"; } + { type = "pom"; sha512 = "30y2mirgqvdm3gdalxkzjljswh9xhygsw6v2jfrd9y61wqng2hzyn7dawkn5q4cyiknmw1b9660pvbnysvh3rbic75lhw5xqqgdjmih"; } + ]; + mavenArtifact_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-artifact"; @@ -12,6 +23,17 @@ rec { { type = "pom"; sha512 = "37kvfxcpfajjn9lmvh5kay4y61ri1190hxxgiil8fqfvmvcm02jcqzfi4ry0nzc80g5fsarsd3s2ns2d8l0lnqjp28nn51dixm9a55w"; } ]; + mavenArtifact_2_0_8 = map (obj: fetchMaven { + version = "2.0.8"; + baseName = "maven-artifact"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0i2xd2fkvp5glb7yx8zhh96px4v2yq0bgxa6xxcy6if0sn8c3vps8jmd1z3ys27jzj1gvwgg4rpa17k0nk1c8szz1v7vwvyhp7s22pi"; } + { type = "pom"; sha512 = "37563kfswgk9yfzm46vk4nr44rncdd3y705vgg20lj4nsrqn7iwg55fx1a4f039gbaf8dzb6xwp0ypyspsx9q742wkwrsr5q41d99v7"; } + ]; + mavenArtifact_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-artifact"; diff --git a/pkgs/development/java-modules/maven/core.nix b/pkgs/development/java-modules/maven/core.nix index d135bd28657..ed3313bba59 100644 --- a/pkgs/development/java-modules/maven/core.nix +++ b/pkgs/development/java-modules/maven/core.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenCore_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-core"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "1iv0bg9z6zmlihxnynccdq0ivgk0bdi2vk863ii59qqnqp9wqcswx0bc60hyfasjm4d8m30b60www56v6y05mjjbpir4mmrjdbxw9gd"; } + { type = "jar"; sha512 = "04hrkgcpvxdisdgcp1mslkylm0b461mp42mylwpm6xdi9lcfdbd97k2rybvwgxd0y9r9j72ahm4fsqjb53xlz4737w96cmynpr8mrz4"; } + ]; + mavenCore_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-core"; diff --git a/pkgs/development/java-modules/maven/doxia-sink-api.nix b/pkgs/development/java-modules/maven/doxia-sink-api.nix index 7454f7bbc96..18ccf4b707a 100644 --- a/pkgs/development/java-modules/maven/doxia-sink-api.nix +++ b/pkgs/development/java-modules/maven/doxia-sink-api.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenDoxiaSinkApi_1_0_alpha6 = map (obj: fetchMaven { + version = "1.0-alpha-6"; + baseName = "doxia-sink-api"; + package = "/org/apache/maven/doxia"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "156j8ic3m2j23nrh074j567qxcsqi8ahpl97ba68l88cq08al1z7mh72hm8jz24lq04kxkrf3r1icqbpki10jgv7qma0cpz86yw27x2"; } + { type = "jar"; sha512 = "12yqdygds5w4dx8zxq4ss65a28pqrhavzzmgi3n7473r1k5r3kiw5h5bm71zdhccv5lgb4lb9p9lswa2pjkwriykfm3fj0l3924x6dk"; } + ]; + mavenDoxiaSinkApi_1_0_alpha7 = map (obj: fetchMaven { version = "1.0-alpha-7"; baseName = "doxia-sink-api"; diff --git a/pkgs/development/java-modules/maven/error-diagnostics.nix b/pkgs/development/java-modules/maven/error-diagnostics.nix index 8f3cd0a4485..6f22316edc7 100644 --- a/pkgs/development/java-modules/maven/error-diagnostics.nix +++ b/pkgs/development/java-modules/maven/error-diagnostics.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenErrorDiagnostics_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-error-diagnostics"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2jva1b8myaxy6y56rkqh8lynj36rj1apsgasc8i9qrigrw2wjk9yhsywv2ylmbspva1aypn23di7bd5bfb7vhaxhlqrlakdx5pqv7kh"; } + { type = "pom"; sha512 = "250x4ajr37nlch6n502ggfmr558hvhdxfgwjr28svvbxlyhk73h2nz9r95gvkfymv32dml8j1d4cgy3zs3qy2wzb679pnyckjwpdq9z"; } + ]; + mavenErrorDiagnostics_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-error-diagnostics"; diff --git a/pkgs/development/java-modules/maven/model.nix b/pkgs/development/java-modules/maven/model.nix index 41b2458550d..70bfd34e737 100644 --- a/pkgs/development/java-modules/maven/model.nix +++ b/pkgs/development/java-modules/maven/model.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenModel_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-model"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2y6dqd0xlkkmff5gwfnc5pk0w6zpircj7mrvfw2nwvsaxx9cw3fkn33m3bamzyz1zv5w1vlrlrnynifvm3mzfrgkl3dxa16p00yj5wp"; } + { type = "pom"; sha512 = "0mnjzcansaxakip9b2nq7pxl2nbf9033if8bap658q9i9fbm8b6djqs09frmdds1vns44vlirvmm94s2k7i1lswmsqjgv3p12lrvbb1"; } + ]; + mavenModel_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-model"; diff --git a/pkgs/development/java-modules/maven/monitor.nix b/pkgs/development/java-modules/maven/monitor.nix index 699d34bbf93..0a71d7ba5a4 100644 --- a/pkgs/development/java-modules/maven/monitor.nix +++ b/pkgs/development/java-modules/maven/monitor.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenMonitor_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-monitor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "1jp0kf3hyvk3x25fnxb9qi1yxs4lk1bpc9r76fvkggm7xhda4k2cr4ql37py5qh08c67bixyl4qiqsvlzv41jqnkxrxr85z2962fy8m"; } + { type = "pom"; sha512 = "3i0fzz4lb6lckvnv61bxcb26cw5cd3ibyirzlh0nnaig80rykf1v0bvr2ll0xpz2ss25b3j320kpwncsir2qmlfi51vh6ms3zm7p1ik"; } + ]; + mavenMonitor_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-monitor"; diff --git a/pkgs/development/java-modules/maven/plugin-api.nix b/pkgs/development/java-modules/maven/plugin-api.nix index b06b83a8e94..e4d8fbec39b 100644 --- a/pkgs/development/java-modules/maven/plugin-api.nix +++ b/pkgs/development/java-modules/maven/plugin-api.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginApi_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-plugin-api"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "pom"; sha512 = "0fvx3mhmpr03cgyy3rx6ysdpvya6zs77yvjki1s9qfd3axzbnh2xl4w2d389rpx2vmqqx3a1lr8nj2yphm5r1wz3sb7v9rnba6jrfcr"; } + { type = "jar"; sha512 = "1fwfw7smywavmafbdma7xla07vaaihkg9md1v16ckp6xpbdxpsknb7s07dnx5jx757gd0gp5ak7mawg0a5sfrvjh955ynikhzjq13lz"; } + ]; + mavenPluginApi_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-plugin-api"; diff --git a/pkgs/development/java-modules/maven/plugin-descriptor.nix b/pkgs/development/java-modules/maven/plugin-descriptor.nix index 0a60032125c..76f1bf5de1b 100644 --- a/pkgs/development/java-modules/maven/plugin-descriptor.nix +++ b/pkgs/development/java-modules/maven/plugin-descriptor.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginDescriptor_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-plugin-descriptor"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2gwjmn4xnxh2hy9nnlr107q1fpnyy2yhkajvj2snpl1xmpn76m1vvj64zf52l9grpvpx91b0pvd8pxa8hzmh8kqdf1w3wqjg5k1p4zf"; } + { type = "pom"; sha512 = "0g9hl6i0kqfrifjmykrg5pfb2xh35by3dc1nfa4i1434xr1fzi4y5avdqaw3zlvhnybi611qxv1g2ydnwkq9mgnvjq8fis4ir60g82s"; } + ]; + mavenPluginDescriptor_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-plugin-descriptor"; diff --git a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix index 82b16e61620..f3ef7c7fc5b 100644 --- a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix +++ b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginParameterDocumenter_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-plugin-parameter-documenter"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3hx5wg0jqhhknfgb98j7d3xy452lyw5yr3ncbk0jfzx1xkxc3v101s5s192q3c2agjgj76xsk1axmipdmwfv3801rbk99hmyjhdqbkn"; } + { type = "pom"; sha512 = "0x56m654vdgakslrbzfnvarh699ag288drbk6vnwjp5xxa5jg9vizrm6kz1917d2qygrpqnn5b6yzwawj864qy9xdadzr9mbak33424"; } + ]; + mavenPluginParameterDocumenter_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-plugin-parameter-documenter"; diff --git a/pkgs/development/java-modules/maven/plugin-registry.nix b/pkgs/development/java-modules/maven/plugin-registry.nix index 547bda4fc9f..b75806182cf 100644 --- a/pkgs/development/java-modules/maven/plugin-registry.nix +++ b/pkgs/development/java-modules/maven/plugin-registry.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenPluginRegistry_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-plugin-registry"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "392cx42731zgiyvjdpqcpbhqvpjbd4ydlxfnracws8vimifcsln33s48yzk2q671ydcwdzs3kla2npy410vqzvc535km5ssj60fhq2f"; } + { type = "pom"; sha512 = "3g1rbjz64x7cihfgmc061nm7sg52p7wr34cb1b1725w7d3hp0vz33s5ybql3vccbf7brx9vvfykxiwsgqbw6g19zv77276vdpy8v5nr"; } + ]; + mavenPluginRegistry_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-plugin-registry"; diff --git a/pkgs/development/java-modules/maven/plugin-testing-harness.nix b/pkgs/development/java-modules/maven/plugin-testing-harness.nix new file mode 100644 index 00000000000..754bcc08031 --- /dev/null +++ b/pkgs/development/java-modules/maven/plugin-testing-harness.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenPluginTestingHarness_1_1 = map (obj: fetchMaven { + version = "1.1"; + baseName = "maven-plugin-testing-harness"; + package = "/org/apache/maven/shared"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "38cqg736n2nlzhssabyw47yl0rqcaha3k8sqgjs7pgvcpphapxinx9gck2n2y5m77rhjwkz0n6lyym6zi2k382jbasm2n59y5gkpnkj"; } + { type = "pom"; sha512 = "26gfh7i9qg79yggsp3sl21qj9s4j6hdabllvbvnnr0m6j8whadzbhfx2ds7p6ddvzvyi5214xrsl6ag3nxw6k5rjw10k4g32b0nyvv2"; } + ]; +} diff --git a/pkgs/development/java-modules/maven/profile.nix b/pkgs/development/java-modules/maven/profile.nix index d5e79d13c2c..b160fb4e943 100644 --- a/pkgs/development/java-modules/maven/profile.nix +++ b/pkgs/development/java-modules/maven/profile.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenProfile_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-profile"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "39zjz3jh5q5k4ryyg8psj741gwy01blflmw2hk9krqid9fpmbbcj5f3h34i1q03qcz7kgb1sz1kp58j2fmbk8364y2i0xyrg4zalzz5"; } + { type = "pom"; sha512 = "32jcvvf47if22cy3z0ld2gf7873ysz4qcx6b2zp62r8pbmj1i2a1kd62llvjv7p2x5l960ndvlr1a80x6mm9mnsjrwxd4vy0iwyshmv"; } + ]; + mavenProfile_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-profile"; diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix index 25911fcdee8..f1ff4f05c4c 100644 --- a/pkgs/development/java-modules/maven/project.nix +++ b/pkgs/development/java-modules/maven/project.nix @@ -23,6 +23,17 @@ rec { { type = "pom"; sha512 = "13z607rjazzrs3rjw6hlhpw6jip85lgdkvnkm1j17wsbhywa53x45ydyg1hzrcax8xr5zxn7mkrryp4wwwm4ihhsaz3nq8bh12yrh8p"; } ]; + mavenProject_2_0_8 = map (obj: fetchMaven { + version = "2.0.8"; + baseName = "maven-project"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2j3mwqh0zjm7pc7jydpdg6xp5gl3ila84zkhk1znn9663d84p4wgkv6zi1r16djc5jvy2g2z2id1zc7gr97spv5riwz3hbw1vw4ajzp"; } + { type = "pom"; sha512 = "1489hvb5g28afc2yjyc5qnlihg0qqiq0r1fkbl976hvr5kfj6pkx4h3sz69gv3pnsgpjkavqxafm11s7w1hgd8xsvajrnsy77hmpsqa"; } + ]; + mavenProject_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; baseName = "maven-project"; diff --git a/pkgs/development/java-modules/maven/reporting-api.nix b/pkgs/development/java-modules/maven/reporting-api.nix index 36818dc57e0..afb949d79c5 100644 --- a/pkgs/development/java-modules/maven/reporting-api.nix +++ b/pkgs/development/java-modules/maven/reporting-api.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenReportingApi_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-reporting-api"; + package = "/org/apache/maven/reporting"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "06721y3g8zxhv2hx9c743ai3pc8d2agdgkz8wyaia6h7k2sy0rjxcfixpdxpw9hzdm0fqjqc3hdjf0j5dlkd11xzv9q87dr1s1x24w2"; } + { type = "pom"; sha512 = "2xjij0375hnv807sar41gk0qk8f7xaqm1fkrgvrbcl5sbwm614rrdxir14wlkkgr78qjx3b8m3r1jrdi47j1n5p4c9zmgg4vjl3n1sy"; } + ]; + mavenReportingApi_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-reporting-api"; @@ -22,4 +33,15 @@ rec { { type = "jar"; sha512 = "0x7j7k3xbxps80swyp4ff1sw4rwrhlxsx80kyh0sj0i9jz50x18p1rba10gx2fqd4l29zri77nlm4qza5yrf61s68xby2zr2bygyc9r"; } { type = "pom"; sha512 = "054v1p9h0141pahs52pg8wb0x4jghm5222yns6mf4dbc9gpy7x9j2b0z2lv9q3slx98378s4zakx4kbk5ca9ldlm8sz9y10fpqm35s6"; } ]; + + mavenReportingApi_2_2_1 = map (obj: fetchMaven { + version = "2.2.1"; + baseName = "maven-reporting-api"; + package = "/org/apache/maven/reporting"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "38nbplfyi1xcf6q502m8sgz9iacqy06y9fq811sz75wsqxld8zxkr85lqg46zhpjm8k3hk7dg4an466j65mbpf0n7iswcjnqn78slil"; } + { type = "pom"; sha512 = "0clwbb7p9fm5xlwkjyxx97v0k9alpz98smlpv26gz9j22hlzl08zajgiw52abqarbk80x28c02clipv1ifgbwrxyji4s8rb5f689nkp"; } + ]; } diff --git a/pkgs/development/java-modules/maven/repository-metadata.nix b/pkgs/development/java-modules/maven/repository-metadata.nix index 7a076a3811e..1ed2717ac4f 100644 --- a/pkgs/development/java-modules/maven/repository-metadata.nix +++ b/pkgs/development/java-modules/maven/repository-metadata.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenRepositoryMetadata_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-repository-metadata"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3aq5k4ifam2lm6mny7zyjlylcpk6is2jnas81w6z5p6qd5jfwfj1i3g89y0vsl7mamh2rp7xncx60mvqr0jm9hxgx8ibjcynkq92kaf"; } + { type = "pom"; sha512 = "29nynsxh8k1q91whs4glca3qxigid32dx70c87jvk1x1cfc8s78bvm6lzr14x7wvw5i5n61lrqvq5mc6mzsi8xmspaqjhm2m7azyx7y"; } + ]; + mavenRepositoryMetadata_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-repository-metadata"; diff --git a/pkgs/development/java-modules/maven/settings.nix b/pkgs/development/java-modules/maven/settings.nix index b4416607ee9..a18532fa362 100644 --- a/pkgs/development/java-modules/maven/settings.nix +++ b/pkgs/development/java-modules/maven/settings.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + mavenSettings_2_0_1 = map (obj: fetchMaven { + version = "2.0.1"; + baseName = "maven-settings"; + package = "/org/apache/maven"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3jf3iix8zwbjrfxswn4x4q5jxmpkm5bqq0pb6yq5vjk74kipkk6cl5cfjhy8pakb1fymq7j7knsi791xp6jrhyyrzi31lgprdmlk06x"; } + { type = "pom"; sha512 = "2r0256akp6gkcg7mjpaf27s985x2hblqk2dqcjq4cl415j4hx1xvarvvkh9py8sk8sjp66nzabph2kyk7v01cy29ryay6b6hn1wzi62"; } + ]; + mavenSettings_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; baseName = "maven-settings"; diff --git a/pkgs/development/java-modules/maven/surefire-junit4.nix b/pkgs/development/java-modules/maven/surefire-junit4.nix new file mode 100644 index 00000000000..83aaebc7f6d --- /dev/null +++ b/pkgs/development/java-modules/maven/surefire-junit4.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mavenSurefireJunit4_2_12_4 = map (obj: fetchMaven { + version = "2.12.4"; + baseName = "surefire-junit4"; + package = "/org/apache/maven/surefire"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2m6k4dsy9d6yfcn33lrv1q4lb3hlg1q6c8ff0rhb05j7lzsiiqa55n2561a45bznhc8l85l31mrvva0h2hhca6xjyx1hw7k3ddgpzc5"; } + { type = "pom"; sha512 = "1na33q7j22fsdwcynd8pv8ivsq1fq51p818nyhhldaqnh7rm2478pnxyhq14wv9mrsgrfxffipaiqyvwq30y69y6ddn597arv16ihix"; } + ]; +} diff --git a/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix b/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix new file mode 100644 index 00000000000..95eb52ae3e8 --- /dev/null +++ b/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix @@ -0,0 +1,14 @@ +{ fetchMaven }: + +rec { + mojoJavaBootClasspathDetector_1_11 = map (obj: fetchMaven { + version = "1.11"; + baseName = "java-boot-classpath-detector"; + package = "/org/codehaus/mojo"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "0dn0ry30n47544bbhp8j3r5fm6ip7cs1i8wg0wdfr735ak7r38wpb297q0k5kfaqrlqwi8cmnz4lngjan223lpwywjc806v27adjh57"; } + { type = "pom"; sha512 = "1ndzid9lik3a3bh8d2n9fqql29wypx4cw4ybvjgqhx63rs8hbb038irmcdr18jsalb8v2sj0bmjv6nmrr58wgf158r1zjv311m95yw0"; } + ]; +} diff --git a/pkgs/development/java-modules/ow2/asm-all.nix b/pkgs/development/java-modules/ow2/asm-all.nix new file mode 100644 index 00000000000..2fee6529f16 --- /dev/null +++ b/pkgs/development/java-modules/ow2/asm-all.nix @@ -0,0 +1,15 @@ +{ fetchMaven }: + +rec { + ow2AsmAll_4_0 = map (obj: fetchMaven { + version = "4.0"; + baseName = "asm-all"; + package = "/org/ow2/asm"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3b38kqyzg15plsdwwr5kri06h0pag1pxnxzlyqcwpaa2ncd4pqh44zc7mzaxrsvpx8z5cdl413xs2p0qn1qhcz92w5lqykm4gnvb2az"; } + { type = "pom"; sha512 = "11gcdp8417immlsb8dvw70cmqykcqvzcl2xz37vsimdpwjx31px88dgmxs6l3k50z9mvs6h1cfgfbaw1i2qmzdkdlbyai8iwnl8q2mr"; } + ]; +} + diff --git a/pkgs/development/java-modules/plexus/archiver.nix b/pkgs/development/java-modules/plexus/archiver.nix index e831df44732..3a2b0a347e3 100644 --- a/pkgs/development/java-modules/plexus/archiver.nix +++ b/pkgs/development/java-modules/plexus/archiver.nix @@ -1,6 +1,17 @@ { fetchMaven }: rec { + plexusArchiver_1_0_alpha7 = map (obj: fetchMaven { + version = "1.0-alpha-7"; + baseName = "plexus-archiver"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "3r1c5bknlk9010wqw1m6asqhnbmqz6xammhpci929gjjims27fr0c9qmskqr55vnbswcmvsiikfjnjwa36msgscirzsay48zrs5iwfk"; } + { type = "pom"; sha512 = "05gnm321rx3zi5bnkgl64nbx6j8f3pz6y0v6nb3xfw44kgv7rxaq8b1v716wpr2p0bdrmarxmzidc92hps2w5src0ramg6xv35zfw6w"; } + ]; + plexusArchiver_2_1 = map (obj: fetchMaven { version = "2.1"; baseName = "plexus-archiver"; diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix index 2cfdd60ccae..ca46c0d4d62 100644 --- a/pkgs/development/java-modules/plexus/utils.nix +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -12,6 +12,17 @@ rec { { type = "pom"; sha512 = "35mm9fkfw1wljabr4lz6l5mq3mxgl7k87whlcz5qlddsbxy0j69j4xgf1fvjlyp06nqq2wz574v54aqpxgp8s6jwjyz9wyvqvsyka8d"; } ]; + plexusUtils_1_0_5 = map (obj: fetchMaven { + version = "1.0.5"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "2wj0xyywifivqq1rnmd3lj7c4kgprcyq3rb4v4y5rr89isdm40hnfhziz0zakyysk8wqw4l4wp3lg7vxhs3yd44rdfm0czvkjl726zj"; } + { type = "pom"; sha512 = "1pz98avnr6pml058mg2db79rpxckcxkgpl8z373l055kppsy1pvmkhjahkjpzfrg63pdsk2kgm2ls9ji5697whpbm7xcwi8j3ssx791"; } + ]; + plexusUtils_1_1 = map (obj: fetchMaven { version = "1.1"; baseName = "plexus-utils"; @@ -45,6 +56,17 @@ rec { { type = "pom"; sha512 = "0liqhpc9pn81vn04qz4j3101jc33hygb415jnwpf0dhph3jay88l49gd9s1bwq6x4npn2v6863vidb8hdh5f8wd20k6m1lqhdpv882j"; } ]; + plexusUtils_1_4_9 = map (obj: fetchMaven { + version = "1.4.9"; + baseName = "plexus-utils"; + package = "/org/codehaus/plexus"; + sha512 = obj.sha512; + type = obj.type; + }) [ + { type = "jar"; sha512 = "12fhq89mqj8m5y0ks8h39ig2q4nr3qlygjwygp9wg60dkfqrm6rscfrycs18pqd9y9fkhk8rqi96gq2vy8wg1v1a24h2wlzak1d22ip"; } + { type = "pom"; sha512 = "23fpn9f8gq0a3hi2mlwzjpbr3kyrsr4wl58zyq8i6xbdnnfx0wfwc2xsfn8yp3mq2pjjpdlza9l3qdmwsyzmrz8micvms8bladpvcmv"; } + ]; + plexusUtils_1_5_1 = map (obj: fetchMaven { version = "1.5.1"; baseName = "plexus-utils"; diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index ee19aaf2103..7feff9548a1 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -105,6 +105,14 @@ rec { type = "pom"; }; + asmParent_4_0 = fetchMaven { + version = "4.0"; + baseName = "asm-parent"; + package = "/org/ow2/asm"; + sha512 = "2vysz9nn1pn1qzd40n7d2njmcpz7qi37pi73k9ajjmmbzwza6h8gc1pvadfqxlnih47gzc1wn3hqrc1sqd3b84kh8nrznwjcp10y0lf"; + type = "pom"; + }; + backportUtilConcurrent_3_1 = fetchMaven { version = "3.1"; baseName = "backport-util-concurrent"; @@ -129,6 +137,14 @@ rec { type = "pom"; }; + commonsParent_11 = fetchMaven { + version = "11"; + baseName = "commons-parent"; + package = "/org/apache/commons"; + sha512 = "3986i0mnawni27fqf74zfb1n9wvyn502nvslfmbwz5m3rgvhfdb7r1wj7qz8g3wznfvh3wd99h83d94300yvy6cilqy5sj9gfwxk3jv"; + type = "pom"; + }; + commonsParent_17 = fetchMaven { version = "17"; baseName = "commons-parent"; @@ -145,6 +161,14 @@ rec { type = "pom"; }; + doxia_1_0_alpha6 = fetchMaven { + version = "1.0-alpha-6"; + baseName = "doxia"; + package = "/org/apache/maven/doxia"; + sha512 = "0ya69g2xfzawf30r2n45n85h2bag0ihd2cbkd0896ykwndx62jyagc594f9pkvb8x9vwgq1dkhfc5lfw1sjcmsxm9dmyzvy2nmykpsy"; + type = "pom"; + }; + doxia_1_0_alpha7 = fetchMaven { version = "1.0-alpha-7"; baseName = "doxia"; @@ -217,6 +241,14 @@ rec { type = "pom"; }; + maven_2_0_8 = fetchMaven { + version = "2.0.8"; + baseName = "maven"; + package = "/org/apache/maven"; + sha512 = "0mzlba0vbanxvdgfvj3kq6xw211j40b6hk6w0b7lc686m2c26vgxks9iisgm10888lq140i6510813326bs9yb053hqfvnz3m72lkss"; + type = "pom"; + }; + maven_2_0_9 = fetchMaven { version = "2.0.9"; baseName = "maven"; @@ -353,6 +385,14 @@ rec { type = "pom"; }; + mavenReporting_2_0_1 = fetchMaven { + version = "2.0.1"; + baseName = "maven-reporting"; + package = "/org/apache/maven/reporting"; + sha512 = "3ns0j0w3g3xzvi4y2nbz7yl3w0bq6npvkpy56c2s2m8z0b0007vw97qm3z7b6iicwck69g9001qqqanhzr35x1qbzlqzrx5v271hvfa"; + type = "pom"; + }; + mavenReporting_2_0_6 = fetchMaven { version = "2.0.6"; baseName = "maven-reporting"; @@ -369,6 +409,22 @@ rec { type = "pom"; }; + mavenReporting_2_2_1 = fetchMaven { + version = "2.2.1"; + baseName = "maven-reporting"; + package = "/org/apache/maven/reporting"; + sha512 = "02gs0nk2hihvayh7gxn1ncbq7nq1hbpr40whby6c58adk7g6jq3cn84fi8svcv10w915f696drav1cimjpizcyjn00if1iql59dmfda"; + type = "pom"; + }; + + mavenSharedComponents_7 = fetchMaven { + version = "7"; + baseName = "maven-shared-components"; + package = "/org/apache/maven/shared"; + sha512 = "35zwvraafv86jpyfvfmi76n9bzmahq5z90j9axb3b6d0wfvildz5qb43kw27si2ldwghiwsfh2jikd3gf9ms553pfillf4baab13dp6"; + type = "pom"; + }; + mavenSharedComponents_11 = fetchMaven { version = "11"; baseName = "maven-shared-components"; @@ -417,6 +473,14 @@ rec { type = "pom"; }; + ow2_1_3 = fetchMaven { + version = "1.3"; + baseName = "ow2"; + package = "/org/ow2"; + sha512 = "1jqfqqmh19lvrjk45zzzp895jbxb8giw8sn1qdvwhh1yqxr1z5vkv98n4g0ib2l359qmb9fal4d21ba57zmbl0rqxqlggv9c5l87gfs"; + type = "pom"; + }; + plexus_1_0_4 = fetchMaven { version = "1.0.4"; baseName = "plexus"; @@ -545,6 +609,14 @@ rec { type = "pom"; }; + plexusComponents_1_1_6 = fetchMaven { + version = "1.1.6"; + baseName = "plexus-components"; + package = "/org/codehaus/plexus"; + sha512 = "1m6f5xzp6mk1n0svznqc8l5x3klr9kk75223ms31q65llx765dxvrsmkjlzgshb0ipb9nfxwk9hs5fvf5dgh0xlzrnc1w2pnqdi8jnh"; + type = "pom"; + }; + plexusComponents_1_1_7 = fetchMaven { version = "1.1.7"; baseName = "plexus-components"; @@ -761,6 +833,14 @@ rec { type = "pom"; }; + surefireProviders_2_12_4 = fetchMaven { + version = "2.12.4"; + baseName = "surefire-providers"; + package = "/org/apache/maven/surefire"; + sha512 = "08di6wgiihz9svrdpkdvhlipdp83byd1s844fnjqfk3z0g5a72lpq718zy27rk41jma3hclmr4pv0g5dvbhf3v8hy92iby8w5rcxv5x"; + type = "pom"; + }; + xbean_3_4 = fetchMaven { version = "3.4"; baseName = "xbean"; diff --git a/pkgs/top-level/java-packages.nix b/pkgs/top-level/java-packages.nix index 488f4cb59db..0df0b5a51c9 100644 --- a/pkgs/top-level/java-packages.nix +++ b/pkgs/top-level/java-packages.nix @@ -27,7 +27,8 @@ in { classworlds_1_1; inherit (callPackage ../development/java-modules/apache/commons-cli.nix { inherit fetchMaven; }) - commonsCli_1_0; + commonsCli_1_0 + commonsCli_1_2; inherit (callPackage ../development/java-modules/apache/commons-io.nix { inherit fetchMaven; }) commonsIo_2_1; @@ -49,6 +50,9 @@ in { inherit (callPackage ../development/java-modules/google/collections.nix { inherit fetchMaven; }) googleCollections_1_0; + inherit (callPackage ../development/java-modules/hamcrest/all.nix { inherit fetchMaven; }) + hamcrestAll_1_3; + inherit (callPackage ../development/java-modules/hamcrest/core.nix { inherit fetchMaven; }) hamcrestCore_1_3; @@ -64,12 +68,15 @@ in { mavenArchiver_2_5; inherit (callPackage ../development/java-modules/maven/artifact.nix { inherit fetchMaven; }) + mavenArtifact_2_0_1 mavenArtifact_2_0_6 + mavenArtifact_2_0_8 mavenArtifact_2_0_9 mavenArtifact_2_2_1 mavenArtifact_3_0_3; inherit (callPackage ../development/java-modules/maven/artifact-manager.nix { inherit fetchMaven; }) + mavenArtifactManager_2_0_1 mavenArtifactManager_2_0_6 mavenArtifactManager_2_0_9 mavenArtifactManager_2_2_1; @@ -80,6 +87,7 @@ in { mavenCommonArtifactFilters_1_4; inherit (callPackage ../development/java-modules/maven/core.nix { inherit fetchMaven; }) + mavenCore_2_0_1 mavenCore_2_0_6 mavenCore_2_0_9 mavenCore_2_2_1; @@ -88,6 +96,7 @@ in { mavenDependencyTree_2_1; inherit (callPackage ../development/java-modules/maven/doxia-sink-api.nix { inherit fetchMaven; }) + mavenDoxiaSinkApi_1_0_alpha6 mavenDoxiaSinkApi_1_0_alpha7 mavenDoxiaSinkApi_1_0_alpha10; @@ -96,6 +105,7 @@ in { mavenEnforcerRules_1_3_1; inherit (callPackage ../development/java-modules/maven/error-diagnostics.nix { inherit fetchMaven; }) + mavenErrorDiagnostics_2_0_1 mavenErrorDiagnostics_2_0_6 mavenErrorDiagnostics_2_0_9 mavenErrorDiagnostics_2_2_1; @@ -108,12 +118,14 @@ in { mavenHello_1_1; inherit (callPackage ../development/java-modules/maven/model.nix { inherit fetchMaven; }) + mavenModel_2_0_1 mavenModel_2_0_6 mavenModel_2_0_9 mavenModel_2_2_1 mavenModel_3_0_3; inherit (callPackage ../development/java-modules/maven/monitor.nix { inherit fetchMaven; }) + mavenMonitor_2_0_1 mavenMonitor_2_0_6 mavenMonitor_2_0_9 mavenMonitor_2_2_1; @@ -123,27 +135,35 @@ in { mavenPluginAnnotations_3_2; inherit (callPackage ../development/java-modules/maven/plugin-api.nix { inherit fetchMaven; }) + mavenPluginApi_2_0_1 mavenPluginApi_2_0_6 mavenPluginApi_2_0_9 mavenPluginApi_2_2_1 mavenPluginApi_3_0_3; inherit (callPackage ../development/java-modules/maven/plugin-descriptor.nix { inherit fetchMaven; }) + mavenPluginDescriptor_2_0_1 mavenPluginDescriptor_2_0_6 mavenPluginDescriptor_2_0_9 mavenPluginDescriptor_2_2_1; inherit (callPackage ../development/java-modules/maven/plugin-parameter-documenter.nix { inherit fetchMaven; }) + mavenPluginParameterDocumenter_2_0_1 mavenPluginParameterDocumenter_2_0_6 mavenPluginParameterDocumenter_2_0_9 mavenPluginParameterDocumenter_2_2_1; inherit (callPackage ../development/java-modules/maven/plugin-registry.nix { inherit fetchMaven; }) + mavenPluginRegistry_2_0_1 mavenPluginRegistry_2_0_6 mavenPluginRegistry_2_0_9 mavenPluginRegistry_2_2_1; + inherit (callPackage ../development/java-modules/maven/plugin-testing-harness.nix { inherit fetchMaven; }) + mavenPluginTestingHarness_1_1; + inherit (callPackage ../development/java-modules/maven/profile.nix { inherit fetchMaven; }) + mavenProfile_2_0_1 mavenProfile_2_0_6 mavenProfile_2_0_9 mavenProfile_2_2_1; @@ -151,19 +171,24 @@ in { inherit (callPackage ../development/java-modules/maven/project.nix { inherit fetchMaven; }) mavenProject_2_0_1 mavenProject_2_0_6 + mavenProject_2_0_8 mavenProject_2_0_9 mavenProject_2_2_1; inherit (callPackage ../development/java-modules/maven/reporting-api.nix { inherit fetchMaven; }) + mavenReportingApi_2_0_1 mavenReportingApi_2_0_6 - mavenReportingApi_2_0_9; + mavenReportingApi_2_0_9 + mavenReportingApi_2_2_1; inherit (callPackage ../development/java-modules/maven/repository-metadata.nix { inherit fetchMaven; }) + mavenRepositoryMetadata_2_0_1 mavenRepositoryMetadata_2_0_6 mavenRepositoryMetadata_2_0_9 mavenRepositoryMetadata_2_2_1; inherit (callPackage ../development/java-modules/maven/settings.nix { inherit fetchMaven; }) + mavenSettings_2_0_1 mavenSettings_2_0_6 mavenSettings_2_0_9 mavenSettings_2_2_1; @@ -186,6 +211,9 @@ in { mavenSurefireCommon_2_12_4 mavenSurefireCommon_2_17; + inherit (callPackage ../development/java-modules/maven/surefire-junit4.nix { inherit fetchMaven; }) + mavenSurefireJunit4_2_12_4; + inherit (callPackage ../development/java-modules/maven/toolchain.nix { inherit fetchMaven; }) mavenToolchain_1_0 mavenToolchain_2_0_9 @@ -194,7 +222,14 @@ in { inherit (callPackage ../development/java-modules/mojo/animal-sniffer.nix { inherit fetchMaven; }) mojoAnimalSniffer_1_11; + inherit (callPackage ../development/java-modules/mojo/java-boot-classpath-detector.nix { inherit fetchMaven; }) + mojoJavaBootClasspathDetector_1_11; + + inherit (callPackage ../development/java-modules/ow2/asm-all.nix { inherit fetchMaven; }) + ow2AsmAll_4_0; + inherit (callPackage ../development/java-modules/plexus/archiver.nix { inherit fetchMaven; }) + plexusArchiver_1_0_alpha7 plexusArchiver_2_1; inherit (callPackage ../development/java-modules/plexus/build-api.nix { inherit fetchMaven; }) @@ -241,9 +276,11 @@ in { inherit (callPackage ../development/java-modules/plexus/utils.nix { inherit fetchMaven; }) plexusUtils_1_0_4 + plexusUtils_1_0_5 plexusUtils_1_1 plexusUtils_1_4_1 plexusUtils_1_4_5 + plexusUtils_1_4_9 plexusUtils_1_5_1 plexusUtils_1_5_5 plexusUtils_1_5_6 From 82c1ff501aec3f625ad423c795e53fbe5ea761be Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Tue, 15 Nov 2016 14:44:35 -0500 Subject: [PATCH 009/216] Create mavenLibs --- pkgs/development/java-modules/collections.nix | 77 +++++++++++++++++++ .../java-modules/junit/default.nix | 4 +- .../java-modules/maven-minimal.nix | 52 ++----------- 3 files changed, 86 insertions(+), 47 deletions(-) create mode 100644 pkgs/development/java-modules/collections.nix diff --git a/pkgs/development/java-modules/collections.nix b/pkgs/development/java-modules/collections.nix new file mode 100644 index 00000000000..39b274b5030 --- /dev/null +++ b/pkgs/development/java-modules/collections.nix @@ -0,0 +1,77 @@ +{ pkgs }: + +with pkgs.javaPackages; + +rec { + mavenLibs_2_0_1 = [ + mavenArtifact_2_0_1 + mavenArtifactManager_2_0_1 + mavenCore_2_0_1 + mavenErrorDiagnostics_2_0_1 + mavenModel_2_0_1 + mavenMonitor_2_0_1 + mavenPluginApi_2_0_1 + mavenPluginDescriptor_2_0_1 + mavenPluginParameterDocumenter_2_0_1 + mavenPluginRegistry_2_0_1 + mavenProfile_2_0_1 + mavenProject_2_0_1 + mavenReportingApi_2_0_1 + mavenRepositoryMetadata_2_0_1 + mavenSettings_2_0_1 + ]; + + mavenLibs_2_0_6 = [ + mavenArtifact_2_0_6 + mavenArtifactManager_2_0_6 + mavenCore_2_0_6 + mavenErrorDiagnostics_2_0_6 + mavenModel_2_0_6 + mavenMonitor_2_0_6 + mavenPluginApi_2_0_6 + mavenPluginDescriptor_2_0_6 + mavenPluginParameterDocumenter_2_0_6 + mavenPluginRegistry_2_0_6 + mavenProfile_2_0_6 + mavenProject_2_0_6 + mavenReportingApi_2_0_6 + mavenRepositoryMetadata_2_0_6 + mavenSettings_2_0_6 + ]; + + mavenLibs_2_0_9 = [ + mavenArtifact_2_0_9 + mavenArtifactManager_2_0_9 + mavenCore_2_0_9 + mavenErrorDiagnostics_2_0_9 + mavenModel_2_0_9 + mavenMonitor_2_0_9 + mavenPluginApi_2_0_9 + mavenPluginDescriptor_2_0_9 + mavenPluginParameterDocumenter_2_0_9 + mavenPluginRegistry_2_0_9 + mavenProfile_2_0_9 + mavenProject_2_0_9 + mavenReportingApi_2_0_9 + mavenRepositoryMetadata_2_0_9 + mavenSettings_2_0_9 + ]; + + mavenLibs_2_2_1 = [ + mavenArtifact_2_2_1 + mavenArtifactManager_2_2_1 + mavenCore_2_2_1 + mavenErrorDiagnostics_2_2_1 + mavenModel_2_2_1 + mavenMonitor_2_2_1 + mavenPluginApi_2_2_1 + mavenPluginDescriptor_2_2_1 + mavenPluginParameterDocumenter_2_2_1 + mavenPluginRegistry_2_2_1 + mavenProfile_2_2_1 + mavenProject_2_2_1 + mavenReportingApi_2_2_1 + mavenRepositoryMetadata_2_2_1 + mavenSettings_2_2_1 + ]; +} diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index 84ccef3975d..2f315fa3161 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -4,6 +4,7 @@ with pkgs.javaPackages; let poms = import (../poms.nix) { inherit fetchMaven; }; + collections = import (../collections.nix) { inherit pkgs; }; in rec { junitGen = { mavenDeps, sha512, version }: mavenbuild rec { inherit mavenDeps sha512 version; @@ -51,7 +52,8 @@ in rec { junit_4_12 = junitGen { mavenDeps = (with mavenPlugins; [ animalSniffer_1_11 mavenEnforcer_1_3_1 mavenReplacer_1_5_3 mavenSurefire_2_17 ]) - ++ [ aetherUtil_0_9_0_M2 ant_1_8_2 antLauncher_1_8_2 bsh_2_0_b4 commonsCli_1_2 commonsIo_2_1 commonsLang_2_3 commonsLang_2_6 hamcrestCore_1_3 mavenArtifact_2_0_1 mavenArtifact_2_0_8 mavenArtifact_3_0_3 mavenArtifactManager_2_0_1 mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_4 mavenCore_2_0_1 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha6 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenErrorDiagnostics_2_0_1 mavenModel_2_0_1 mavenModel_3_0_3 mavenMonitor_2_0_1 mavenPluginApi_2_0_1 mavenPluginApi_3_0_3 mavenPluginAnnotations_3_2 mavenPluginDescriptor_2_0_1 mavenPluginParameterDocumenter_2_0_1 mavenPluginRegistry_2_0_1 mavenPluginTestingHarness_1_1 mavenProfile_2_0_1 mavenProject_2_0_1 mavenProject_2_0_8 mavenReportingApi_2_0_1 mavenReportingApi_2_2_1 mavenRepositoryMetadata_2_0_1 mavenSettings_2_0_1 mavenSurefireApi_2_17 mavenSurefireBooter_2_17 mavenSurefireCommon_2_17 mavenToolchain_2_2_1 mojoAnimalSniffer_1_11 mojoJavaBootClasspathDetector_1_11 ow2AsmAll_4_0 plexusArchiver_1_0_alpha7 plexusClassworlds_2_4 plexusI18n_1_0_beta6 plexusUtils_1_0_5 plexusUtils_1_1 plexusUtils_1_4_9 plexusUtils_1_5_6 plexusUtils_2_0_6 sisuGuice_2_9_4 sisuInjectBean_2_1_1 sisuInjectPlexus_2_1_1 xercesImpl_2_8_0 xmlApis_1_3_03 ] + ++ collections.mavenLibs_2_0_1 + ++ [ aetherUtil_0_9_0_M2 ant_1_8_2 antLauncher_1_8_2 bsh_2_0_b4 commonsCli_1_2 commonsIo_2_1 commonsLang_2_3 commonsLang_2_6 hamcrestCore_1_3 mavenArtifact_2_0_8 mavenArtifact_3_0_3 mavenCommonArtifactFilters_1_2 mavenCommonArtifactFilters_1_4 mavenDependencyTree_2_1 mavenDoxiaSinkApi_1_0_alpha6 mavenDoxiaSinkApi_1_0_alpha10 mavenEnforcerApi_1_3_1 mavenEnforcerRules_1_3_1 mavenModel_3_0_3 mavenPluginApi_3_0_3 mavenPluginAnnotations_3_2 mavenPluginTestingHarness_1_1 mavenProject_2_0_8 mavenReportingApi_2_2_1 mavenSurefireApi_2_17 mavenSurefireBooter_2_17 mavenSurefireCommon_2_17 mavenToolchain_2_2_1 mojoAnimalSniffer_1_11 mojoJavaBootClasspathDetector_1_11 ow2AsmAll_4_0 plexusArchiver_1_0_alpha7 plexusClassworlds_2_4 plexusI18n_1_0_beta6 plexusUtils_1_0_5 plexusUtils_1_1 plexusUtils_1_4_9 plexusUtils_1_5_6 plexusUtils_2_0_6 sisuGuice_2_9_4 sisuInjectBean_2_1_1 sisuInjectPlexus_2_1_1 xercesImpl_2_8_0 xmlApis_1_3_03 ] ++ (with poms; [ aether_0_9_0_M2 animalSnifferParent_1_11 antParent_1_8_2 apache_1 apache_7 asmParent_4_0 beanshell_2_0_b4 codehausParent_4 commonsParent_11 commonsParent_17 doxia_1_0_alpha6 doxia_1_0_alpha10 enforcer_1_3_1 hamcrestParent_1_3 maven_2_0_1 maven_2_0_8 maven_3_0_3 mavenParent_6 mavenParent_15 mavenPluginTools_3_2 mavenReporting_2_0_1 mavenReporting_2_2_1 mavenSharedComponents_7 mavenSharedComponents_11 mojoParent_32 ow2_1_3 plexus_1_0_12 plexusComponents_1_1_4 plexusComponents_1_1_6 sisuInjectGuiceBean_2_1_1 sisuInject_2_1_1 sisuInjectGuicePlexus_2_1_1 sisuParent_2_1_1 sonatypeForgeParent_7 sonatypeParent_7 surefire_2_17 ]); sha512 = "0bbldnf37jl855s1pdx2a518ivfifv75189vsbpylnj8530vnf8z6b2dglkcbcjgr22lp1s4m1nnplz5dmka9sr7vj055p88k27kqw9"; version = "4.12"; diff --git a/pkgs/development/java-modules/maven-minimal.nix b/pkgs/development/java-modules/maven-minimal.nix index 359060c8dae..df87f51768d 100644 --- a/pkgs/development/java-modules/maven-minimal.nix +++ b/pkgs/development/java-modules/maven-minimal.nix @@ -4,13 +4,17 @@ with stdenv.lib; with pkgs.javaPackages; let + collections = import ./collections.nix { inherit pkgs; }; fetchMaven = pkgs.callPackage ./m2install.nix { }; - poms = import ./poms.nix { inherit fetchMaven; }; plugins = import ./mavenPlugins.nix { inherit stdenv pkgs maven; }; + poms = import ./poms.nix { inherit fetchMaven; }; in rec { # Maven needs all of these to function mavenMinimal = flatten - [ + collections.mavenLibs_2_0_6 + ++ collections.mavenLibs_2_0_9 + ++ collections.mavenLibs_2_2_1 + ++ [ classworlds_1_1_alpha2 classworlds_1_1 commonsCli_1_0 @@ -23,54 +27,10 @@ in rec { junit_3_8_2 log4j_1_2_12 mavenArchiver_2_5 - mavenArtifact_2_0_6 - mavenArtifact_2_0_9 - mavenArtifact_2_2_1 - mavenArtifactManager_2_0_6 - mavenArtifactManager_2_0_9 - mavenArtifactManager_2_2_1 mavenCommonArtifactFilters_1_3 - mavenCore_2_0_6 - mavenCore_2_0_9 - mavenCore_2_2_1 mavenDoxiaSinkApi_1_0_alpha7 - mavenErrorDiagnostics_2_0_6 - mavenErrorDiagnostics_2_0_9 - mavenErrorDiagnostics_2_2_1 mavenFiltering_1_1 - mavenModel_2_0_6 - mavenModel_2_0_9 - mavenModel_2_2_1 - mavenMonitor_2_0_6 - mavenMonitor_2_0_9 - mavenMonitor_2_2_1 - mavenPluginDescriptor_2_0_6 - mavenPluginDescriptor_2_0_9 - mavenPluginDescriptor_2_2_1 - mavenPluginParameterDocumenter_2_0_6 - mavenPluginParameterDocumenter_2_0_9 - mavenPluginParameterDocumenter_2_2_1 - mavenProfile_2_0_6 - mavenProfile_2_0_9 - mavenProfile_2_2_1 - mavenProject_2_0_6 - mavenProject_2_0_9 - mavenProject_2_2_1 mavenPluginAnnotations_3_1 - mavenPluginApi_2_0_6 - mavenPluginApi_2_0_9 - mavenPluginApi_2_2_1 - mavenPluginRegistry_2_0_6 - mavenPluginRegistry_2_0_9 - mavenPluginRegistry_2_2_1 - mavenReportingApi_2_0_6 - mavenReportingApi_2_0_9 - mavenRepositoryMetadata_2_0_6 - mavenRepositoryMetadata_2_0_9 - mavenRepositoryMetadata_2_2_1 - mavenSettings_2_0_6 - mavenSettings_2_0_9 - mavenSettings_2_2_1 mavenSharedIncremental_1_1 mavenSharedUtils_0_1 mavenSurefireApi_2_12_4 From 1684c9a6a09f96af57301a14566e8f7c2020e40d Mon Sep 17 00:00:00 2001 From: Renzo Carbonara Date: Thu, 9 Feb 2017 00:22:11 +0100 Subject: [PATCH 010/216] compilers/ghcjs/base.nix: Take ghcjsNodePkgs as argument --- pkgs/development/compilers/ghcjs/base.nix | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/pkgs/development/compilers/ghcjs/base.nix b/pkgs/development/compilers/ghcjs/base.nix index 393278be49e..f548db5def3 100644 --- a/pkgs/development/compilers/ghcjs/base.nix +++ b/pkgs/development/compilers/ghcjs/base.nix @@ -39,6 +39,11 @@ , coreutils , libiconv +, ghcjsNodePkgs ? callPackage ../../../top-level/node-packages.nix { + generated = ./node-packages-generated.nix; + self = ghcjsNodePkgs; + } + , version ? "0.2.0" , ghcjsSrc ? fetchFromGitHub { owner = "ghcjs"; @@ -160,12 +165,7 @@ in mkDerivation (rec { --with-gmp-includes ${gmp.dev}/include \ --with-gmp-libraries ${gmp.out}/lib ''; - passthru = let - ghcjsNodePkgs = callPackage ../../../top-level/node-packages.nix { - generated = ./node-packages-generated.nix; - self = ghcjsNodePkgs; - }; - in { + passthru = { inherit bootPkgs; isCross = true; isGhcjs = true; From 98617ccb9938d37a73804e4eb3d03c06079d7595 Mon Sep 17 00:00:00 2001 From: Sukant Hajra Date: Thu, 9 Feb 2017 23:04:17 -0600 Subject: [PATCH 011/216] Haskell infrastructure: fix #9871 (overrideCabal) As per the recommendation by @Mathnerd314, this change seems to work with the testing I did. It makes sense to me why it works, but I think it's in an important enough place that someone with much deeper knowledge of Haskell infrastructure in Nixpkgs should give it a really heavy review. I also consolidated all the overrideCabal definitions (there were two) into a single definition in haskell-modules/lib.nix. --- pkgs/development/haskell-modules/default.nix | 9 ++++----- pkgs/development/haskell-modules/lib.nix | 2 +- 2 files changed, 5 insertions(+), 6 deletions(-) diff --git a/pkgs/development/haskell-modules/default.nix b/pkgs/development/haskell-modules/default.nix index d2ecc338128..15a4ed42e8c 100644 --- a/pkgs/development/haskell-modules/default.nix +++ b/pkgs/development/haskell-modules/default.nix @@ -6,12 +6,13 @@ let - inherit (stdenv.lib) fix' extends; + inherit (stdenv.lib) fix' extends makeOverridable; + inherit (import ./lib.nix { inherit pkgs; }) overrideCabal; haskellPackages = self: let - mkDerivation = pkgs.callPackage ./generic-builder.nix { + mkDerivationImpl = pkgs.callPackage ./generic-builder.nix { inherit stdenv; inherit (pkgs) fetchurl pkgconfig glibcLocales coreutils gnugrep gnused; jailbreak-cabal = if (self.ghc.cross or null) != null @@ -37,9 +38,7 @@ let }); }; - overrideCabal = drv: f: drv.override (args: args // { - mkDerivation = drv: args.mkDerivation (drv // f drv); - }); + mkDerivation = makeOverridable mkDerivationImpl; callPackageWithScope = scope: drv: args: (stdenv.lib.callPackageWith scope drv args) // { overrideScope = f: callPackageWithScope (mkScope (fix' (extends f scope.__unfix__))) drv args; diff --git a/pkgs/development/haskell-modules/lib.nix b/pkgs/development/haskell-modules/lib.nix index f7c9811234e..2d5ba699d8a 100644 --- a/pkgs/development/haskell-modules/lib.nix +++ b/pkgs/development/haskell-modules/lib.nix @@ -3,7 +3,7 @@ rec { overrideCabal = drv: f: (drv.override (args: args // { - mkDerivation = drv: args.mkDerivation (drv // f drv); + mkDerivation = drv: (args.mkDerivation drv).override f; })) // { overrideScope = scope: overrideCabal (drv.overrideScope scope) f; }; From 8a7a44c9181217e3640534b49b7a135023d22890 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Wed, 16 Nov 2016 12:39:59 -0500 Subject: [PATCH 012/216] javaPackages: Use artifactId/groupId --- pkgs/build-support/fetchurl/mirrors.nix | 4 +- .../java-modules/apache/ant-launcher.nix | 4 +- pkgs/development/java-modules/apache/ant.nix | 4 +- .../java-modules/apache/commons-cli.nix | 8 +- .../java-modules/apache/commons-io.nix | 4 +- .../java-modules/apache/commons-lang.nix | 12 +- .../java-modules/apache/commons-lang3.nix | 4 +- .../apache/commons-logging-api.nix | 4 +- .../java-modules/apache/xbean-reflect.nix | 4 +- .../java-modules/beanshell/bsh.nix | 4 +- .../java-modules/classworlds/classworlds.nix | 8 +- .../java-modules/eclipse/aether-util.nix | 4 +- .../java-modules/findbugs/jsr305.nix | 4 +- .../java-modules/google/collections.nix | 4 +- .../development/java-modules/hamcrest/all.nix | 4 +- .../java-modules/hamcrest/core.nix | 4 +- .../java-modules/junit/default.nix | 8 +- .../java-modules/log4j/default.nix | 4 +- pkgs/development/java-modules/m2install.nix | 6 +- .../java-modules/maven/archiver.nix | 4 +- .../java-modules/maven/artifact-manager.nix | 16 +- .../java-modules/maven/artifact.nix | 24 +- .../maven/common-artifact-filters.nix | 12 +- pkgs/development/java-modules/maven/core.nix | 16 +- .../java-modules/maven/dependency-tree.nix | 4 +- .../java-modules/maven/doxia-sink-api.nix | 12 +- .../java-modules/maven/enforcer.nix | 8 +- .../java-modules/maven/error-diagnostics.nix | 16 +- .../java-modules/maven/filtering.nix | 4 +- pkgs/development/java-modules/maven/model.nix | 20 +- .../java-modules/maven/monitor.nix | 16 +- .../java-modules/maven/plugin-annotations.nix | 8 +- .../java-modules/maven/plugin-api.nix | 20 +- .../java-modules/maven/plugin-descriptor.nix | 16 +- .../maven/plugin-parameter-documenter.nix | 16 +- .../java-modules/maven/plugin-registry.nix | 16 +- .../maven/plugin-testing-harness.nix | 4 +- .../java-modules/maven/profile.nix | 16 +- .../java-modules/maven/project.nix | 20 +- .../java-modules/maven/reporting-api.nix | 16 +- .../maven/repository-metadata.nix | 16 +- .../java-modules/maven/settings.nix | 16 +- .../java-modules/maven/shared-incremental.nix | 4 +- .../java-modules/maven/shared-utils.nix | 4 +- .../java-modules/maven/surefire-api.nix | 8 +- .../java-modules/maven/surefire-booter.nix | 8 +- .../java-modules/maven/surefire-common.nix | 8 +- .../java-modules/maven/surefire-junit4.nix | 4 +- .../java-modules/maven/toolchain.nix | 12 +- .../development/java-modules/mavenPlugins.nix | 40 +- .../java-modules/mojo/animal-sniffer.nix | 4 +- .../mojo/java-boot-classpath-detector.nix | 4 +- pkgs/development/java-modules/ow2/asm-all.nix | 4 +- .../java-modules/plexus/archiver.nix | 8 +- .../java-modules/plexus/build-api.nix | 4 +- .../java-modules/plexus/classworlds.nix | 8 +- .../java-modules/plexus/compiler-api.nix | 4 +- .../java-modules/plexus/compiler-javac.nix | 4 +- .../java-modules/plexus/compiler-manager.nix | 4 +- .../plexus/component-annotations.nix | 4 +- .../java-modules/plexus/container-default.nix | 12 +- .../java-modules/plexus/digest.nix | 4 +- pkgs/development/java-modules/plexus/i18n.nix | 4 +- .../java-modules/plexus/interactivity-api.nix | 4 +- .../java-modules/plexus/interpolation.nix | 16 +- pkgs/development/java-modules/plexus/io.nix | 4 +- .../development/java-modules/plexus/utils.nix | 64 +-- pkgs/development/java-modules/poms.nix | 424 +++++++++--------- pkgs/development/java-modules/sisu/guice.nix | 4 +- .../java-modules/sisu/inject-bean.nix | 4 +- .../java-modules/sisu/inject-plexus.nix | 4 +- pkgs/development/java-modules/xerces/impl.nix | 4 +- .../java-modules/xml-apis/default.nix | 4 +- 73 files changed, 551 insertions(+), 551 deletions(-) diff --git a/pkgs/build-support/fetchurl/mirrors.nix b/pkgs/build-support/fetchurl/mirrors.nix index 0304165828f..f181ade1072 100644 --- a/pkgs/build-support/fetchurl/mirrors.nix +++ b/pkgs/build-support/fetchurl/mirrors.nix @@ -398,7 +398,7 @@ rec { # Maven Central maven = [ - http://repo1.maven.org/maven2 - http://central.maven.org/maven2 + http://repo1.maven.org/maven2/ + http://central.maven.org/maven2/ ]; } diff --git a/pkgs/development/java-modules/apache/ant-launcher.nix b/pkgs/development/java-modules/apache/ant-launcher.nix index 0e4d7b26765..e6a2b0cae99 100644 --- a/pkgs/development/java-modules/apache/ant-launcher.nix +++ b/pkgs/development/java-modules/apache/ant-launcher.nix @@ -3,8 +3,8 @@ rec { antLauncher_1_8_2 = map (obj: fetchMaven { version = "1.8.2"; - baseName = "ant-launcher"; - package = "/org/apache/ant"; + artifactId = "ant-launcher"; + groupId = "org.apache.ant"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/ant.nix b/pkgs/development/java-modules/apache/ant.nix index fa83663f5ec..b4a6aa68f44 100644 --- a/pkgs/development/java-modules/apache/ant.nix +++ b/pkgs/development/java-modules/apache/ant.nix @@ -3,8 +3,8 @@ rec { ant_1_8_2 = map (obj: fetchMaven { version = "1.8.2"; - baseName = "ant"; - package = "/org/apache/ant"; + artifactId = "ant"; + groupId = "org.apache.ant"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/commons-cli.nix b/pkgs/development/java-modules/apache/commons-cli.nix index ffad5632b0a..050d511b0a1 100644 --- a/pkgs/development/java-modules/apache/commons-cli.nix +++ b/pkgs/development/java-modules/apache/commons-cli.nix @@ -3,8 +3,8 @@ rec { commonsCli_1_0 = map (obj: fetchMaven { version = "1.0"; - baseName = "commons-cli"; - package = "/commons-cli"; + artifactId = "commons-cli"; + groupId = "commons-cli"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { commonsCli_1_2 = map (obj: fetchMaven { version = "1.2"; - baseName = "commons-cli"; - package = "/commons-cli"; + artifactId = "commons-cli"; + groupId = "commons-cli"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/commons-io.nix b/pkgs/development/java-modules/apache/commons-io.nix index 612dcb85f8e..70ce940ccf1 100644 --- a/pkgs/development/java-modules/apache/commons-io.nix +++ b/pkgs/development/java-modules/apache/commons-io.nix @@ -3,8 +3,8 @@ rec { commonsIo_2_1 = map (obj: fetchMaven { version = "2.1"; - baseName = "commons-io"; - package = "/commons-io"; + artifactId = "commons-io"; + groupId = "commons-io"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/commons-lang.nix b/pkgs/development/java-modules/apache/commons-lang.nix index f6dc6b407ef..a2d71e9db0c 100644 --- a/pkgs/development/java-modules/apache/commons-lang.nix +++ b/pkgs/development/java-modules/apache/commons-lang.nix @@ -3,8 +3,8 @@ rec { commonsLang_2_1 = map (obj: fetchMaven { version = "2.1"; - baseName = "commons-lang"; - package = "/commons-lang"; + artifactId = "commons-lang"; + groupId = "commons-lang"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { commonsLang_2_3 = map (obj: fetchMaven { version = "2.3"; - baseName = "commons-lang"; - package = "/commons-lang"; + artifactId = "commons-lang"; + groupId = "commons-lang"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { commonsLang_2_6 = map (obj: fetchMaven { version = "2.6"; - baseName = "commons-lang"; - package = "/commons-lang"; + artifactId = "commons-lang"; + groupId = "commons-lang"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/commons-lang3.nix b/pkgs/development/java-modules/apache/commons-lang3.nix index 8b5498f362d..63f68b92543 100644 --- a/pkgs/development/java-modules/apache/commons-lang3.nix +++ b/pkgs/development/java-modules/apache/commons-lang3.nix @@ -3,8 +3,8 @@ rec { commonsLang3_3_1 = map (obj: fetchMaven { version = "3.1"; - baseName = "commons-lang3"; - package = "/org/apache/commons"; + artifactId = "commons-lang3"; + groupId = "org.apache.commons"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/commons-logging-api.nix b/pkgs/development/java-modules/apache/commons-logging-api.nix index 9aae04e4206..47750abe462 100644 --- a/pkgs/development/java-modules/apache/commons-logging-api.nix +++ b/pkgs/development/java-modules/apache/commons-logging-api.nix @@ -3,8 +3,8 @@ rec { commonsLoggingApi_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "commons-logging-api"; - package = "/commons-logging"; + artifactId = "commons-logging-api"; + groupId = "commons-logging"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/apache/xbean-reflect.nix b/pkgs/development/java-modules/apache/xbean-reflect.nix index c1e9916443c..f0614ec99e3 100644 --- a/pkgs/development/java-modules/apache/xbean-reflect.nix +++ b/pkgs/development/java-modules/apache/xbean-reflect.nix @@ -3,8 +3,8 @@ rec { xbeanReflect_3_4 = map (obj: fetchMaven { version = "3.4"; - baseName = "xbean-reflect"; - package = "/org/apache/xbean"; + artifactId = "xbean-reflect"; + groupId = "org.apache.xbean"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/beanshell/bsh.nix b/pkgs/development/java-modules/beanshell/bsh.nix index e636fe557ec..41756bb80d5 100644 --- a/pkgs/development/java-modules/beanshell/bsh.nix +++ b/pkgs/development/java-modules/beanshell/bsh.nix @@ -3,8 +3,8 @@ rec { bsh_2_0_b4 = map (obj: fetchMaven { version = "2.0b4"; - baseName = "bsh"; - package = "/org/beanshell"; + artifactId = "bsh"; + groupId = "org.beanshell"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/classworlds/classworlds.nix b/pkgs/development/java-modules/classworlds/classworlds.nix index 3a85cc4363e..f8bbc07f102 100644 --- a/pkgs/development/java-modules/classworlds/classworlds.nix +++ b/pkgs/development/java-modules/classworlds/classworlds.nix @@ -3,8 +3,8 @@ rec { classworlds_1_1_alpha2 = map (obj: fetchMaven { version = "1.1-alpha-2"; - baseName = "classworlds"; - package = "/classworlds"; + artifactId = "classworlds"; + groupId = "classworlds"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { classworlds_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "classworlds"; - package = "/classworlds"; + artifactId = "classworlds"; + groupId = "classworlds"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/eclipse/aether-util.nix b/pkgs/development/java-modules/eclipse/aether-util.nix index 33ba3d5edd7..60aac560b9b 100644 --- a/pkgs/development/java-modules/eclipse/aether-util.nix +++ b/pkgs/development/java-modules/eclipse/aether-util.nix @@ -3,8 +3,8 @@ rec { aetherUtil_0_9_0_M2 = map (obj: fetchMaven { version = "0.9.0.M2"; - baseName = "aether-util"; - package = "/org/eclipse/aether"; + artifactId = "aether-util"; + groupId = "org.eclipse.aether"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/findbugs/jsr305.nix b/pkgs/development/java-modules/findbugs/jsr305.nix index 466ce247633..2e842410aaf 100644 --- a/pkgs/development/java-modules/findbugs/jsr305.nix +++ b/pkgs/development/java-modules/findbugs/jsr305.nix @@ -3,8 +3,8 @@ rec { findbugsJsr305_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "jsr305"; - package = "/com/google/code/findbugs"; + artifactId = "jsr305"; + groupId = "com.google.code.findbugs"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/google/collections.nix b/pkgs/development/java-modules/google/collections.nix index 9898ddeaf31..ec874c73e36 100644 --- a/pkgs/development/java-modules/google/collections.nix +++ b/pkgs/development/java-modules/google/collections.nix @@ -3,8 +3,8 @@ rec { googleCollections_1_0 = map (obj: fetchMaven { version = "1.0"; - baseName = "google-collections"; - package = "/com/google/collections"; + artifactId = "google-collections"; + groupId = "com.google.collections"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/hamcrest/all.nix b/pkgs/development/java-modules/hamcrest/all.nix index 2bba1ac9249..bab9e1b115d 100644 --- a/pkgs/development/java-modules/hamcrest/all.nix +++ b/pkgs/development/java-modules/hamcrest/all.nix @@ -3,8 +3,8 @@ rec { hamcrestAll_1_3 = map (obj: fetchMaven { version = "1.3"; - baseName = "hamcrest-all"; - package = "/org/hamcrest"; + artifactId = "hamcrest-all"; + groupId = "org.hamcrest"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/hamcrest/core.nix b/pkgs/development/java-modules/hamcrest/core.nix index 104331f6f13..3842b8c5afa 100644 --- a/pkgs/development/java-modules/hamcrest/core.nix +++ b/pkgs/development/java-modules/hamcrest/core.nix @@ -3,8 +3,8 @@ rec { hamcrestCore_1_3 = map (obj: fetchMaven { version = "1.3"; - baseName = "hamcrest-core"; - package = "/org/hamcrest"; + artifactId = "hamcrest-core"; + groupId = "org.hamcrest"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/junit/default.nix b/pkgs/development/java-modules/junit/default.nix index 2f315fa3161..5017cb39602 100644 --- a/pkgs/development/java-modules/junit/default.nix +++ b/pkgs/development/java-modules/junit/default.nix @@ -30,8 +30,8 @@ in rec { junit_3_8_1 = map (obj: fetchMaven { version = "3.8.1"; - baseName = "junit"; - package = "/junit"; + artifactId = "junit"; + groupId = "junit"; sha512 = obj.sha512; type = obj.type; }) [ @@ -41,8 +41,8 @@ in rec { junit_3_8_2 = map (obj: fetchMaven { version = "3.8.2"; - baseName = "junit"; - package = "/junit"; + artifactId = "junit"; + groupId = "junit"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/log4j/default.nix b/pkgs/development/java-modules/log4j/default.nix index 65aaa41adb1..a8b1ea9f021 100644 --- a/pkgs/development/java-modules/log4j/default.nix +++ b/pkgs/development/java-modules/log4j/default.nix @@ -3,8 +3,8 @@ rec { log4j_1_2_12 = map (obj: fetchMaven { version = "1.2.12"; - baseName = "log4j"; - package = "/log4j"; + artifactId = "log4j"; + groupId = "log4j"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/m2install.nix b/pkgs/development/java-modules/m2install.nix index 88e8efca1a1..7ebe655580e 100644 --- a/pkgs/development/java-modules/m2install.nix +++ b/pkgs/development/java-modules/m2install.nix @@ -1,9 +1,9 @@ { stdenv, fetchurl }: -{ version, baseName, package, sha512, type ? "jar", suffix ? "" }: +{ version, artifactId, groupId, sha512, type ? "jar", suffix ? "" }: let - name = "${baseName}-${version}"; - m2Path = "${package}/${baseName}/${version}"; + name = "${artifactId}-${version}"; + m2Path = "${builtins.replaceStrings ["."] ["/"] groupId}/${artifactId}/${version}"; m2File = "${name}${suffix}.${type}"; src = fetchurl rec { inherit sha512; diff --git a/pkgs/development/java-modules/maven/archiver.nix b/pkgs/development/java-modules/maven/archiver.nix index ecab1f1e99c..14c5a99d42f 100644 --- a/pkgs/development/java-modules/maven/archiver.nix +++ b/pkgs/development/java-modules/maven/archiver.nix @@ -3,8 +3,8 @@ rec { mavenArchiver_2_5 = map (obj: fetchMaven { version = "2.5"; - baseName = "maven-archiver"; - package = "/org/apache/maven"; + artifactId = "maven-archiver"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/artifact-manager.nix b/pkgs/development/java-modules/maven/artifact-manager.nix index 6d7e0caadfd..0796d066510 100644 --- a/pkgs/development/java-modules/maven/artifact-manager.nix +++ b/pkgs/development/java-modules/maven/artifact-manager.nix @@ -3,8 +3,8 @@ rec { mavenArtifactManager_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-artifact-manager"; - package = "/org/apache/maven"; + artifactId = "maven-artifact-manager"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenArtifactManager_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-artifact-manager"; - package = "/org/apache/maven"; + artifactId = "maven-artifact-manager"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenArtifactManager_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-artifact-manager"; - package = "/org/apache/maven"; + artifactId = "maven-artifact-manager"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenArtifactManager_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-artifact-manager"; - package = "/org/apache/maven"; + artifactId = "maven-artifact-manager"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/artifact.nix b/pkgs/development/java-modules/maven/artifact.nix index 224570f910f..bb0e578d5d6 100644 --- a/pkgs/development/java-modules/maven/artifact.nix +++ b/pkgs/development/java-modules/maven/artifact.nix @@ -3,8 +3,8 @@ rec { mavenArtifact_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenArtifact_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenArtifact_2_0_8 = map (obj: fetchMaven { version = "2.0.8"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenArtifact_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -47,8 +47,8 @@ rec { mavenArtifact_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -58,8 +58,8 @@ rec { mavenArtifact_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; - baseName = "maven-artifact"; - package = "/org/apache/maven"; + artifactId = "maven-artifact"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/common-artifact-filters.nix b/pkgs/development/java-modules/maven/common-artifact-filters.nix index 3949882f98b..948dbc3baf6 100644 --- a/pkgs/development/java-modules/maven/common-artifact-filters.nix +++ b/pkgs/development/java-modules/maven/common-artifact-filters.nix @@ -3,8 +3,8 @@ rec { mavenCommonArtifactFilters_1_2 = map (obj: fetchMaven { version = "1.2"; - baseName = "maven-common-artifact-filters"; - package = "/org/apache/maven/shared"; + artifactId = "maven-common-artifact-filters"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenCommonArtifactFilters_1_3 = map (obj: fetchMaven { version = "1.3"; - baseName = "maven-common-artifact-filters"; - package = "/org/apache/maven/shared"; + artifactId = "maven-common-artifact-filters"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenCommonArtifactFilters_1_4 = map (obj: fetchMaven { version = "1.4"; - baseName = "maven-common-artifact-filters"; - package = "/org/apache/maven/shared"; + artifactId = "maven-common-artifact-filters"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/core.nix b/pkgs/development/java-modules/maven/core.nix index ed3313bba59..5b45f89e9d5 100644 --- a/pkgs/development/java-modules/maven/core.nix +++ b/pkgs/development/java-modules/maven/core.nix @@ -3,8 +3,8 @@ rec { mavenCore_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-core"; - package = "/org/apache/maven"; + artifactId = "maven-core"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenCore_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-core"; - package = "/org/apache/maven"; + artifactId = "maven-core"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenCore_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-core"; - package = "/org/apache/maven"; + artifactId = "maven-core"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenCore_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-core"; - package = "/org/apache/maven"; + artifactId = "maven-core"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/dependency-tree.nix b/pkgs/development/java-modules/maven/dependency-tree.nix index cdd626e5848..00d089ea249 100644 --- a/pkgs/development/java-modules/maven/dependency-tree.nix +++ b/pkgs/development/java-modules/maven/dependency-tree.nix @@ -3,8 +3,8 @@ rec { mavenDependencyTree_2_1 = map (obj: fetchMaven { version = "2.1"; - baseName = "maven-dependency-tree"; - package = "/org/apache/maven/shared"; + artifactId = "maven-dependency-tree"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/doxia-sink-api.nix b/pkgs/development/java-modules/maven/doxia-sink-api.nix index 18ccf4b707a..9fa1051cd80 100644 --- a/pkgs/development/java-modules/maven/doxia-sink-api.nix +++ b/pkgs/development/java-modules/maven/doxia-sink-api.nix @@ -3,8 +3,8 @@ rec { mavenDoxiaSinkApi_1_0_alpha6 = map (obj: fetchMaven { version = "1.0-alpha-6"; - baseName = "doxia-sink-api"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia-sink-api"; + groupId = "org.apache.maven.doxia"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenDoxiaSinkApi_1_0_alpha7 = map (obj: fetchMaven { version = "1.0-alpha-7"; - baseName = "doxia-sink-api"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia-sink-api"; + groupId = "org.apache.maven.doxia"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenDoxiaSinkApi_1_0_alpha10 = map (obj: fetchMaven { version = "1.0-alpha-10"; - baseName = "doxia-sink-api"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia-sink-api"; + groupId = "org.apache.maven.doxia"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/enforcer.nix b/pkgs/development/java-modules/maven/enforcer.nix index 83037e6adee..014f678bc14 100644 --- a/pkgs/development/java-modules/maven/enforcer.nix +++ b/pkgs/development/java-modules/maven/enforcer.nix @@ -3,8 +3,8 @@ rec { mavenEnforcerApi_1_3_1 = map (obj: fetchMaven { version = "1.3.1"; - baseName = "enforcer-api"; - package = "/org/apache/maven/enforcer"; + artifactId = "enforcer-api"; + groupId = "org.apache.maven.enforcer"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenEnforcerRules_1_3_1 = map (obj: fetchMaven { version = "1.3.1"; - baseName = "enforcer-rules"; - package = "/org/apache/maven/enforcer"; + artifactId = "enforcer-rules"; + groupId = "org.apache.maven.enforcer"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/error-diagnostics.nix b/pkgs/development/java-modules/maven/error-diagnostics.nix index 6f22316edc7..80cbf993a60 100644 --- a/pkgs/development/java-modules/maven/error-diagnostics.nix +++ b/pkgs/development/java-modules/maven/error-diagnostics.nix @@ -3,8 +3,8 @@ rec { mavenErrorDiagnostics_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-error-diagnostics"; - package = "/org/apache/maven"; + artifactId = "maven-error-diagnostics"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenErrorDiagnostics_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-error-diagnostics"; - package = "/org/apache/maven"; + artifactId = "maven-error-diagnostics"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenErrorDiagnostics_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-error-diagnostics"; - package = "/org/apache/maven"; + artifactId = "maven-error-diagnostics"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenErrorDiagnostics_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-error-diagnostics"; - package = "/org/apache/maven"; + artifactId = "maven-error-diagnostics"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/filtering.nix b/pkgs/development/java-modules/maven/filtering.nix index 5851a3db195..963d6c6b646 100644 --- a/pkgs/development/java-modules/maven/filtering.nix +++ b/pkgs/development/java-modules/maven/filtering.nix @@ -3,8 +3,8 @@ rec { mavenFiltering_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "maven-filtering"; - package = "/org/apache/maven/shared"; + artifactId = "maven-filtering"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/model.nix b/pkgs/development/java-modules/maven/model.nix index 70bfd34e737..2ae3bfe6034 100644 --- a/pkgs/development/java-modules/maven/model.nix +++ b/pkgs/development/java-modules/maven/model.nix @@ -3,8 +3,8 @@ rec { mavenModel_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-model"; - package = "/org/apache/maven"; + artifactId = "maven-model"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenModel_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-model"; - package = "/org/apache/maven"; + artifactId = "maven-model"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenModel_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-model"; - package = "/org/apache/maven"; + artifactId = "maven-model"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenModel_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-model"; - package = "/org/apache/maven"; + artifactId = "maven-model"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -47,8 +47,8 @@ rec { mavenModel_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; - baseName = "maven-model"; - package = "/org/apache/maven"; + artifactId = "maven-model"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/monitor.nix b/pkgs/development/java-modules/maven/monitor.nix index 0a71d7ba5a4..ce6c7c17694 100644 --- a/pkgs/development/java-modules/maven/monitor.nix +++ b/pkgs/development/java-modules/maven/monitor.nix @@ -3,8 +3,8 @@ rec { mavenMonitor_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-monitor"; - package = "/org/apache/maven"; + artifactId = "maven-monitor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenMonitor_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-monitor"; - package = "/org/apache/maven"; + artifactId = "maven-monitor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenMonitor_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-monitor"; - package = "/org/apache/maven"; + artifactId = "maven-monitor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenMonitor_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-monitor"; - package = "/org/apache/maven"; + artifactId = "maven-monitor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-annotations.nix b/pkgs/development/java-modules/maven/plugin-annotations.nix index 6bd8928cf0f..f852cc957a5 100644 --- a/pkgs/development/java-modules/maven/plugin-annotations.nix +++ b/pkgs/development/java-modules/maven/plugin-annotations.nix @@ -3,8 +3,8 @@ rec { mavenPluginAnnotations_3_1 = map (obj: fetchMaven { version = "3.1"; - baseName = "maven-plugin-annotations"; - package = "/org/apache/maven/plugin-tools"; + artifactId = "maven-plugin-annotations"; + groupId = "org.apache.maven.plugin-tools"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenPluginAnnotations_3_2 = map (obj: fetchMaven { version = "3.2"; - baseName = "maven-plugin-annotations"; - package = "/org/apache/maven/plugin-tools"; + artifactId = "maven-plugin-annotations"; + groupId = "org.apache.maven.plugin-tools"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-api.nix b/pkgs/development/java-modules/maven/plugin-api.nix index e4d8fbec39b..be9642b0e20 100644 --- a/pkgs/development/java-modules/maven/plugin-api.nix +++ b/pkgs/development/java-modules/maven/plugin-api.nix @@ -3,8 +3,8 @@ rec { mavenPluginApi_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-plugin-api"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-api"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenPluginApi_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-plugin-api"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-api"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenPluginApi_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-plugin-api"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-api"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenPluginApi_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-plugin-api"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-api"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -47,8 +47,8 @@ rec { mavenPluginApi_3_0_3 = map (obj: fetchMaven { version = "3.0.3"; - baseName = "maven-plugin-api"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-api"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-descriptor.nix b/pkgs/development/java-modules/maven/plugin-descriptor.nix index 76f1bf5de1b..dbdc09a4673 100644 --- a/pkgs/development/java-modules/maven/plugin-descriptor.nix +++ b/pkgs/development/java-modules/maven/plugin-descriptor.nix @@ -3,8 +3,8 @@ rec { mavenPluginDescriptor_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-plugin-descriptor"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-descriptor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenPluginDescriptor_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-plugin-descriptor"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-descriptor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenPluginDescriptor_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-plugin-descriptor"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-descriptor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenPluginDescriptor_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-plugin-descriptor"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-descriptor"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix index f3ef7c7fc5b..9e11c0f4082 100644 --- a/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix +++ b/pkgs/development/java-modules/maven/plugin-parameter-documenter.nix @@ -3,8 +3,8 @@ rec { mavenPluginParameterDocumenter_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-plugin-parameter-documenter"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-parameter-documenter"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenPluginParameterDocumenter_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-plugin-parameter-documenter"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-parameter-documenter"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenPluginParameterDocumenter_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-plugin-parameter-documenter"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-parameter-documenter"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenPluginParameterDocumenter_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-plugin-parameter-documenter"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-parameter-documenter"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-registry.nix b/pkgs/development/java-modules/maven/plugin-registry.nix index b75806182cf..f0074ef816e 100644 --- a/pkgs/development/java-modules/maven/plugin-registry.nix +++ b/pkgs/development/java-modules/maven/plugin-registry.nix @@ -3,8 +3,8 @@ rec { mavenPluginRegistry_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-plugin-registry"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-registry"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenPluginRegistry_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-plugin-registry"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-registry"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenPluginRegistry_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-plugin-registry"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-registry"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenPluginRegistry_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-plugin-registry"; - package = "/org/apache/maven"; + artifactId = "maven-plugin-registry"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/plugin-testing-harness.nix b/pkgs/development/java-modules/maven/plugin-testing-harness.nix index 754bcc08031..a65f1962048 100644 --- a/pkgs/development/java-modules/maven/plugin-testing-harness.nix +++ b/pkgs/development/java-modules/maven/plugin-testing-harness.nix @@ -3,8 +3,8 @@ rec { mavenPluginTestingHarness_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "maven-plugin-testing-harness"; - package = "/org/apache/maven/shared"; + artifactId = "maven-plugin-testing-harness"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/profile.nix b/pkgs/development/java-modules/maven/profile.nix index b160fb4e943..6940fafae82 100644 --- a/pkgs/development/java-modules/maven/profile.nix +++ b/pkgs/development/java-modules/maven/profile.nix @@ -3,8 +3,8 @@ rec { mavenProfile_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-profile"; - package = "/org/apache/maven"; + artifactId = "maven-profile"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenProfile_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-profile"; - package = "/org/apache/maven"; + artifactId = "maven-profile"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenProfile_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-profile"; - package = "/org/apache/maven"; + artifactId = "maven-profile"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenProfile_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-profile"; - package = "/org/apache/maven"; + artifactId = "maven-profile"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/project.nix b/pkgs/development/java-modules/maven/project.nix index f1ff4f05c4c..0b07d8b8679 100644 --- a/pkgs/development/java-modules/maven/project.nix +++ b/pkgs/development/java-modules/maven/project.nix @@ -3,8 +3,8 @@ rec { mavenProject_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-project"; - package = "/org/apache/maven"; + artifactId = "maven-project"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenProject_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-project"; - package = "/org/apache/maven"; + artifactId = "maven-project"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenProject_2_0_8 = map (obj: fetchMaven { version = "2.0.8"; - baseName = "maven-project"; - package = "/org/apache/maven"; + artifactId = "maven-project"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenProject_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-project"; - package = "/org/apache/maven"; + artifactId = "maven-project"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -47,8 +47,8 @@ rec { mavenProject_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-project"; - package = "/org/apache/maven"; + artifactId = "maven-project"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/reporting-api.nix b/pkgs/development/java-modules/maven/reporting-api.nix index afb949d79c5..8a508cf1505 100644 --- a/pkgs/development/java-modules/maven/reporting-api.nix +++ b/pkgs/development/java-modules/maven/reporting-api.nix @@ -3,8 +3,8 @@ rec { mavenReportingApi_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-reporting-api"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting-api"; + groupId = "org.apache.maven.reporting"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenReportingApi_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-reporting-api"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting-api"; + groupId = "org.apache.maven.reporting"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenReportingApi_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-reporting-api"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting-api"; + groupId = "org.apache.maven.reporting"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenReportingApi_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-reporting-api"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting-api"; + groupId = "org.apache.maven.reporting"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/repository-metadata.nix b/pkgs/development/java-modules/maven/repository-metadata.nix index 1ed2717ac4f..443a1acd451 100644 --- a/pkgs/development/java-modules/maven/repository-metadata.nix +++ b/pkgs/development/java-modules/maven/repository-metadata.nix @@ -3,8 +3,8 @@ rec { mavenRepositoryMetadata_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-repository-metadata"; - package = "/org/apache/maven"; + artifactId = "maven-repository-metadata"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenRepositoryMetadata_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-repository-metadata"; - package = "/org/apache/maven"; + artifactId = "maven-repository-metadata"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenRepositoryMetadata_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-repository-metadata"; - package = "/org/apache/maven"; + artifactId = "maven-repository-metadata"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenRepositoryMetadata_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-repository-metadata"; - package = "/org/apache/maven"; + artifactId = "maven-repository-metadata"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/settings.nix b/pkgs/development/java-modules/maven/settings.nix index a18532fa362..6b42082cfd8 100644 --- a/pkgs/development/java-modules/maven/settings.nix +++ b/pkgs/development/java-modules/maven/settings.nix @@ -3,8 +3,8 @@ rec { mavenSettings_2_0_1 = map (obj: fetchMaven { version = "2.0.1"; - baseName = "maven-settings"; - package = "/org/apache/maven"; + artifactId = "maven-settings"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenSettings_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "maven-settings"; - package = "/org/apache/maven"; + artifactId = "maven-settings"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenSettings_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-settings"; - package = "/org/apache/maven"; + artifactId = "maven-settings"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { mavenSettings_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-settings"; - package = "/org/apache/maven"; + artifactId = "maven-settings"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/shared-incremental.nix b/pkgs/development/java-modules/maven/shared-incremental.nix index 2d4ec372be4..67c44986d0a 100644 --- a/pkgs/development/java-modules/maven/shared-incremental.nix +++ b/pkgs/development/java-modules/maven/shared-incremental.nix @@ -3,8 +3,8 @@ rec { mavenSharedIncremental_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "maven-shared-incremental"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-incremental"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/shared-utils.nix b/pkgs/development/java-modules/maven/shared-utils.nix index 9b56075383d..b3cfc928091 100644 --- a/pkgs/development/java-modules/maven/shared-utils.nix +++ b/pkgs/development/java-modules/maven/shared-utils.nix @@ -3,8 +3,8 @@ rec { mavenSharedUtils_0_1 = map (obj: fetchMaven { version = "0.1"; - baseName = "maven-shared-utils"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-utils"; + groupId = "org.apache.maven.shared"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/surefire-api.nix b/pkgs/development/java-modules/maven/surefire-api.nix index cd422bbb758..c1f7fcc3f76 100644 --- a/pkgs/development/java-modules/maven/surefire-api.nix +++ b/pkgs/development/java-modules/maven/surefire-api.nix @@ -3,8 +3,8 @@ rec { mavenSurefireApi_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "surefire-api"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-api"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenSurefireApi_2_17 = map (obj: fetchMaven { version = "2.17"; - baseName = "surefire-api"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-api"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/surefire-booter.nix b/pkgs/development/java-modules/maven/surefire-booter.nix index f7fb8068a26..b62aa86bf45 100644 --- a/pkgs/development/java-modules/maven/surefire-booter.nix +++ b/pkgs/development/java-modules/maven/surefire-booter.nix @@ -3,8 +3,8 @@ rec { mavenSurefireBooter_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "surefire-booter"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-booter"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenSurefireBooter_2_17 = map (obj: fetchMaven { version = "2.17"; - baseName = "surefire-booter"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-booter"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/surefire-common.nix b/pkgs/development/java-modules/maven/surefire-common.nix index 4e56b0c5a86..bc0573f6b70 100644 --- a/pkgs/development/java-modules/maven/surefire-common.nix +++ b/pkgs/development/java-modules/maven/surefire-common.nix @@ -3,8 +3,8 @@ rec { mavenSurefireCommon_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "maven-surefire-common"; - package = "/org/apache/maven/surefire"; + artifactId = "maven-surefire-common"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenSurefireCommon_2_17 = map (obj: fetchMaven { version = "2.17"; - baseName = "maven-surefire-common"; - package = "/org/apache/maven/surefire"; + artifactId = "maven-surefire-common"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/surefire-junit4.nix b/pkgs/development/java-modules/maven/surefire-junit4.nix index 83aaebc7f6d..1374080d087 100644 --- a/pkgs/development/java-modules/maven/surefire-junit4.nix +++ b/pkgs/development/java-modules/maven/surefire-junit4.nix @@ -3,8 +3,8 @@ rec { mavenSurefireJunit4_2_12_4 = map (obj: fetchMaven { version = "2.12.4"; - baseName = "surefire-junit4"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-junit4"; + groupId = "org.apache.maven.surefire"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/maven/toolchain.nix b/pkgs/development/java-modules/maven/toolchain.nix index 97ea74a5e52..864d3b98f7b 100644 --- a/pkgs/development/java-modules/maven/toolchain.nix +++ b/pkgs/development/java-modules/maven/toolchain.nix @@ -3,8 +3,8 @@ rec { mavenToolchain_1_0 = map (obj: fetchMaven { version = "1.0"; - baseName = "maven-toolchain"; - package = "/org/apache/maven"; + artifactId = "maven-toolchain"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { mavenToolchain_2_0_9 = map (obj: fetchMaven { version = "2.0.9"; - baseName = "maven-toolchain"; - package = "/org/apache/maven"; + artifactId = "maven-toolchain"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { mavenToolchain_2_2_1 = map (obj: fetchMaven { version = "2.2.1"; - baseName = "maven-toolchain"; - package = "/org/apache/maven"; + artifactId = "maven-toolchain"; + groupId = "org.apache.maven"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/mavenPlugins.nix b/pkgs/development/java-modules/mavenPlugins.nix index 5cd022b6837..e9ce5b1ce8c 100644 --- a/pkgs/development/java-modules/mavenPlugins.nix +++ b/pkgs/development/java-modules/mavenPlugins.nix @@ -10,8 +10,8 @@ in rec { animalSniffer_1_11 = map (obj: fetchMaven { version = "1.11"; - baseName = "animal-sniffer-maven-plugin"; - package = "/org/codehaus/mojo"; + artifactId = "animal-sniffer-maven-plugin"; + groupId = "org.codehaus.mojo"; sha512 = obj.sha512; type = obj.type; }) [ @@ -21,8 +21,8 @@ in rec { mavenClean_2_5 = map (obj: fetchMaven rec { version = "2.5"; - baseName = "maven-clean-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-clean-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -32,8 +32,8 @@ in rec { mavenCompiler_3_1 = map (obj: fetchMaven rec { version = "3.1"; - baseName = "maven-compiler-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-compiler-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -43,8 +43,8 @@ in rec { mavenEnforcer_1_3_1 = map (obj: fetchMaven rec { version = "1.3.1"; - baseName = "maven-enforcer-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-enforcer-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -54,8 +54,8 @@ in rec { mavenInstall_2_4 = map (obj: fetchMaven rec { version = "2.4"; - baseName = "maven-install-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-install-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -65,8 +65,8 @@ in rec { mavenJar_2_4 = map (obj: fetchMaven rec { version = "2.4"; - baseName = "maven-jar-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-jar-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -76,8 +76,8 @@ in rec { mavenReplacer_1_5_3 = map (obj: fetchMaven rec { version = "1.5.3"; - baseName = "replacer"; - package = "/com/google/code/maven-replacer-plugin"; + artifactId = "replacer"; + groupId = "com.google.code.maven-replacer-plugin"; sha512 = obj.sha512; type = obj.type; }) [ @@ -87,8 +87,8 @@ in rec { mavenResources_2_6 = map (obj: fetchMaven rec { version = "2.6"; - baseName = "maven-resources-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-resources-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -98,8 +98,8 @@ in rec { mavenSurefire_2_12_4 = map (obj: fetchMaven rec { version = "2.12.4"; - baseName = "maven-surefire-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-surefire-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ @@ -109,8 +109,8 @@ in rec { mavenSurefire_2_17 = map (obj: fetchMaven rec { version = "2.17"; - baseName = "maven-surefire-plugin"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-surefire-plugin"; + groupId = "org.apache.maven.plugins"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/mojo/animal-sniffer.nix b/pkgs/development/java-modules/mojo/animal-sniffer.nix index b6a5565f6fc..dd9b1d1b0aa 100644 --- a/pkgs/development/java-modules/mojo/animal-sniffer.nix +++ b/pkgs/development/java-modules/mojo/animal-sniffer.nix @@ -3,8 +3,8 @@ rec { mojoAnimalSniffer_1_11 = map (obj: fetchMaven { version = "1.11"; - baseName = "animal-sniffer"; - package = "/org/codehaus/mojo"; + artifactId = "animal-sniffer"; + groupId = "org.codehaus.mojo"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix b/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix index 95eb52ae3e8..245daa5fdb9 100644 --- a/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix +++ b/pkgs/development/java-modules/mojo/java-boot-classpath-detector.nix @@ -3,8 +3,8 @@ rec { mojoJavaBootClasspathDetector_1_11 = map (obj: fetchMaven { version = "1.11"; - baseName = "java-boot-classpath-detector"; - package = "/org/codehaus/mojo"; + artifactId = "java-boot-classpath-detector"; + groupId = "org.codehaus.mojo"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/ow2/asm-all.nix b/pkgs/development/java-modules/ow2/asm-all.nix index 2fee6529f16..08d18745ed7 100644 --- a/pkgs/development/java-modules/ow2/asm-all.nix +++ b/pkgs/development/java-modules/ow2/asm-all.nix @@ -3,8 +3,8 @@ rec { ow2AsmAll_4_0 = map (obj: fetchMaven { version = "4.0"; - baseName = "asm-all"; - package = "/org/ow2/asm"; + artifactId = "asm-all"; + groupId = "org.ow2.asm"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/archiver.nix b/pkgs/development/java-modules/plexus/archiver.nix index 3a2b0a347e3..384b9285976 100644 --- a/pkgs/development/java-modules/plexus/archiver.nix +++ b/pkgs/development/java-modules/plexus/archiver.nix @@ -3,8 +3,8 @@ rec { plexusArchiver_1_0_alpha7 = map (obj: fetchMaven { version = "1.0-alpha-7"; - baseName = "plexus-archiver"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-archiver"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { plexusArchiver_2_1 = map (obj: fetchMaven { version = "2.1"; - baseName = "plexus-archiver"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-archiver"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/build-api.nix b/pkgs/development/java-modules/plexus/build-api.nix index 2425a6f12ba..c417c955b69 100644 --- a/pkgs/development/java-modules/plexus/build-api.nix +++ b/pkgs/development/java-modules/plexus/build-api.nix @@ -3,8 +3,8 @@ rec { plexusBuildApi_0_0_4 = map (obj: fetchMaven { version = "0.0.4"; - baseName = "plexus-build-api"; - package = "/org/sonatype/plexus"; + artifactId = "plexus-build-api"; + groupId = "org.sonatype.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/classworlds.nix b/pkgs/development/java-modules/plexus/classworlds.nix index 308287a2904..6ff1755e8f5 100644 --- a/pkgs/development/java-modules/plexus/classworlds.nix +++ b/pkgs/development/java-modules/plexus/classworlds.nix @@ -3,8 +3,8 @@ rec { plexusClassworlds_2_2_2 = map (obj: fetchMaven { version = "2.2.2"; - baseName = "plexus-classworlds"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-classworlds"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { plexusClassworlds_2_4 = map (obj: fetchMaven { version = "2.4"; - baseName = "plexus-classworlds"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-classworlds"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/compiler-api.nix b/pkgs/development/java-modules/plexus/compiler-api.nix index 2ef5d3cdab1..11baab0950d 100644 --- a/pkgs/development/java-modules/plexus/compiler-api.nix +++ b/pkgs/development/java-modules/plexus/compiler-api.nix @@ -3,8 +3,8 @@ rec { plexusCompilerApi_2_2 = map (obj: fetchMaven { version = "2.2"; - baseName = "plexus-compiler-api"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-compiler-api"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/compiler-javac.nix b/pkgs/development/java-modules/plexus/compiler-javac.nix index e3f4defd97a..a42064a0e9e 100644 --- a/pkgs/development/java-modules/plexus/compiler-javac.nix +++ b/pkgs/development/java-modules/plexus/compiler-javac.nix @@ -3,8 +3,8 @@ rec { plexusCompilerJavac_2_2 = map (obj: fetchMaven { version = "2.2"; - baseName = "plexus-compiler-javac"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-compiler-javac"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/compiler-manager.nix b/pkgs/development/java-modules/plexus/compiler-manager.nix index 0675fff5004..f7221a96627 100644 --- a/pkgs/development/java-modules/plexus/compiler-manager.nix +++ b/pkgs/development/java-modules/plexus/compiler-manager.nix @@ -3,8 +3,8 @@ rec { plexusCompilerManager_2_2 = map (obj: fetchMaven { version = "2.2"; - baseName = "plexus-compiler-manager"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-compiler-manager"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/component-annotations.nix b/pkgs/development/java-modules/plexus/component-annotations.nix index 949238001be..fd3fc80e7e0 100644 --- a/pkgs/development/java-modules/plexus/component-annotations.nix +++ b/pkgs/development/java-modules/plexus/component-annotations.nix @@ -3,8 +3,8 @@ rec { plexusComponentAnnotations_1_5_5 = map (obj: fetchMaven { version = "1.5.5"; - baseName = "plexus-component-annotations"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-component-annotations"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/container-default.nix b/pkgs/development/java-modules/plexus/container-default.nix index 4b9949f3eb3..375a1913afc 100644 --- a/pkgs/development/java-modules/plexus/container-default.nix +++ b/pkgs/development/java-modules/plexus/container-default.nix @@ -3,8 +3,8 @@ rec { plexusContainerDefault_1_0_alpha9 = map (obj: fetchMaven { version = "1.0-alpha-9"; - baseName = "plexus-container-default"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-container-default"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { plexusContainerDefault_1_0_alpha9_stable1 = map (obj: fetchMaven { version = "1.0-alpha-9-stable-1"; - baseName = "plexus-container-default"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-container-default"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { plexusContainerDefault_1_5_5 = map (obj: fetchMaven { version = "1.5.5"; - baseName = "plexus-container-default"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-container-default"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/digest.nix b/pkgs/development/java-modules/plexus/digest.nix index 8bd73891779..be2013a2676 100644 --- a/pkgs/development/java-modules/plexus/digest.nix +++ b/pkgs/development/java-modules/plexus/digest.nix @@ -3,8 +3,8 @@ rec { plexusDigest_1_0 = map (obj: fetchMaven { version = "1.0"; - baseName = "plexus-digest"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-digest"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/i18n.nix b/pkgs/development/java-modules/plexus/i18n.nix index 7af0cd17de8..5b34cde0503 100644 --- a/pkgs/development/java-modules/plexus/i18n.nix +++ b/pkgs/development/java-modules/plexus/i18n.nix @@ -3,8 +3,8 @@ rec { plexusI18n_1_0_beta6 = map (obj: fetchMaven { version = "1.0-beta-6"; - baseName = "plexus-i18n"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-i18n"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/interactivity-api.nix b/pkgs/development/java-modules/plexus/interactivity-api.nix index 9d62aec70f4..8ada106f48f 100644 --- a/pkgs/development/java-modules/plexus/interactivity-api.nix +++ b/pkgs/development/java-modules/plexus/interactivity-api.nix @@ -3,8 +3,8 @@ rec { plexusInteractivityApi_1_0_alpha4 = map (obj: fetchMaven { version = "1.0-alpha-4"; - baseName = "plexus-interactivity-api"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-interactivity-api"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/interpolation.nix b/pkgs/development/java-modules/plexus/interpolation.nix index 2d08495532d..90ff3de6a3f 100644 --- a/pkgs/development/java-modules/plexus/interpolation.nix +++ b/pkgs/development/java-modules/plexus/interpolation.nix @@ -3,8 +3,8 @@ rec { plexusInterpolation_1_11 = map (obj: fetchMaven { version = "1.11"; - baseName = "plexus-interpolation"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-interpolation"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { plexusInterpolation_1_12 = map (obj: fetchMaven { version = "1.12"; - baseName = "plexus-interpolation"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-interpolation"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { plexusInterpolation_1_13 = map (obj: fetchMaven { version = "1.13"; - baseName = "plexus-interpolation"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-interpolation"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { plexusInterpolation_1_15 = map (obj: fetchMaven { version = "1.15"; - baseName = "plexus-interpolation"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-interpolation"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/io.nix b/pkgs/development/java-modules/plexus/io.nix index 1b17ae3c2ca..eee41f5ed2f 100644 --- a/pkgs/development/java-modules/plexus/io.nix +++ b/pkgs/development/java-modules/plexus/io.nix @@ -3,8 +3,8 @@ rec { plexusIo_2_0_2 = map (obj: fetchMaven { version = "2.0.2"; - baseName = "plexus-io"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-io"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/plexus/utils.nix b/pkgs/development/java-modules/plexus/utils.nix index ca46c0d4d62..ce0537cea7d 100644 --- a/pkgs/development/java-modules/plexus/utils.nix +++ b/pkgs/development/java-modules/plexus/utils.nix @@ -3,8 +3,8 @@ rec { plexusUtils_1_0_4 = map (obj: fetchMaven { version = "1.0.4"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -14,8 +14,8 @@ rec { plexusUtils_1_0_5 = map (obj: fetchMaven { version = "1.0.5"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -25,8 +25,8 @@ rec { plexusUtils_1_1 = map (obj: fetchMaven { version = "1.1"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -36,8 +36,8 @@ rec { plexusUtils_1_4_1 = map (obj: fetchMaven { version = "1.4.1"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -47,8 +47,8 @@ rec { plexusUtils_1_4_5 = map (obj: fetchMaven { version = "1.4.5"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -58,8 +58,8 @@ rec { plexusUtils_1_4_9 = map (obj: fetchMaven { version = "1.4.9"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -69,8 +69,8 @@ rec { plexusUtils_1_5_1 = map (obj: fetchMaven { version = "1.5.1"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -80,8 +80,8 @@ rec { plexusUtils_1_5_5 = map (obj: fetchMaven { version = "1.5.5"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -91,8 +91,8 @@ rec { plexusUtils_1_5_6 = map (obj: fetchMaven { version = "1.5.6"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -102,8 +102,8 @@ rec { plexusUtils_1_5_8 = map (obj: fetchMaven { version = "1.5.8"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -113,8 +113,8 @@ rec { plexusUtils_1_5_15 = map (obj: fetchMaven { version = "1.5.15"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -124,8 +124,8 @@ rec { plexusUtils_2_0_5 = map (obj: fetchMaven { version = "2.0.5"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -135,8 +135,8 @@ rec { plexusUtils_2_0_6 = map (obj: fetchMaven { version = "2.0.6"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -146,8 +146,8 @@ rec { plexusUtils_3_0 = map (obj: fetchMaven { version = "3.0"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -157,8 +157,8 @@ rec { plexusUtils_3_0_5 = map (obj: fetchMaven { version = "3.0.5"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ @@ -168,8 +168,8 @@ rec { plexusUtils_3_0_8 = map (obj: fetchMaven { version = "3.0.8"; - baseName = "plexus-utils"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-utils"; + groupId = "org.codehaus.plexus"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/poms.nix b/pkgs/development/java-modules/poms.nix index 7feff9548a1..610f98a7e46 100644 --- a/pkgs/development/java-modules/poms.nix +++ b/pkgs/development/java-modules/poms.nix @@ -3,848 +3,848 @@ rec { aether_0_9_0_M2 = fetchMaven { version = "0.9.0.M2"; - baseName = "aether"; - package = "/org/eclipse/aether"; + artifactId = "aether"; + groupId = "org.eclipse.aether"; sha512 = "0ampl2jkkc1f5cbigmi1b5nnxhb9qqzz0nyfb5a2vzbw3ri7ry8dj6xgjznlpxib46zxgaxcsvhxq2yx6a9i8chnzvgghccwpl808yi"; type = "pom"; }; animalSnifferParent_1_11 = fetchMaven { version = "1.11"; - baseName = "animal-sniffer-parent"; - package = "/org/codehaus/mojo"; + artifactId = "animal-sniffer-parent"; + groupId = "org.codehaus.mojo"; sha512 = "3w9l3b4qxzmlwmaqppn1d794ycqf5piilv44fc74jccbgahdsq1as8dvyknnj2610yklwxx3146s7f0c3ms8y93alv02wybjwk5fd07"; type = "pom"; }; antParent_1_8_2 = fetchMaven { version = "1.8.2"; - baseName = "ant-parent"; - package = "/org/apache/ant"; + artifactId = "ant-parent"; + groupId = "org.apache.ant"; sha512 = "1q560n9xbqk9qpprvm0nigd5nhm9s8m027qxjmzhay083sjrazscpaly4mzgry5lpdmr3xyhly1r1s88879y04qr5xqzqh0j45j943x"; type = "pom"; }; apache_1 = fetchMaven { version = "1"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "0vbf7mbs61n13dmxndvzkafr0sg9p7g45ng9j1917cz8a9m4zflqf7xvpp9wfprmb4d1wd3ay2hhy9brxryqmvx41wfjlk9ahg34k0h"; type = "pom"; }; apache_3 = fetchMaven { version = "3"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "3vvqxycj7zxa9dfxa6f8i2azdvxc7ci68fk3nlkjvhsglmwr39wf6cwgj6qqlrw3mabzs714lgz0wdacsidncadxzfw774ck20dq1rf"; type = "pom"; }; apache_4 = fetchMaven { version = "4"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "3yb998i1azfxdjk2ndcc19gzx12i0bdi6jqwp5mhwp9ac5dfsplkb5np4bkpsb948y8kpvw1pyvkx8rw0a0rvkxqzxr98ng5nq80vw6"; type = "pom"; }; apache_5 = fetchMaven { version = "5"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "11l6b46mwm404vahylssab5mj4a1fw3zrjhsz3mcj5x3awnqa03131j8phias2n0rppn53xcg2p2xgr9mbp7llwabwx8jm0kz2mpgh0"; type = "pom"; }; apache_6 = fetchMaven { version = "6"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "2nvwk7fhiqcbr4vrwl0d3g4wz25vll24ga9kyc89fzq6b9nr6bqfphrm5a73kdih97l5cqlszw8xc847viw2ss1mwabn590f01ykhj0"; type = "pom"; }; apache_7 = fetchMaven { version = "7"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "2yvwxxifqypmpgxyx10ggj6l52jnl64f9554kyfdph7z56n02bcalj3cr43m6br0as6yc67k5p23l2k3gvdr66c5dfw1l8rwhahk9lr"; type = "pom"; }; apache_9 = fetchMaven { version = "9"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "0wak95l7zlizrildiji9763zzs10dmhflxaqzg8r9qw2j8a20f2nmns03skvd8na2p12zzvrxa15p952gdfkvrynmvcv2vi1qz822g9"; type = "pom"; }; apache_10 = fetchMaven { version = "10"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "0kmva6f2q5rq7rk9ljwn3rxa4w2j7sjkxsmvambzqpj61cagdnq4vj9jk0xxx8448kqckdh5w2xkr5lr33sgfl67jy9l5h2s6h13v6m"; type = "pom"; }; apache_11 = fetchMaven { version = "11"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "09v6sghdaxinrk3pnpnc36x24z62gqn65v25q83mc0q6n49l0xir55xk21qzc8kc6hrdr9khnr7jxkqz207cyv6wky6sy7c3pqg0na0"; type = "pom"; }; apache_13 = fetchMaven { version = "13"; - baseName = "apache"; - package = "/org/apache"; + artifactId = "apache"; + groupId = "org.apache"; sha512 = "0sf86l1457wwp8czg32xhh96l5nlw8v84lbi59nfdxxzcrsn8b1ysgwda3r1ck0d86c5gjmh3qg7kbwlrspwa71w9zn9sby3bszj99v"; type = "pom"; }; asmParent_4_0 = fetchMaven { version = "4.0"; - baseName = "asm-parent"; - package = "/org/ow2/asm"; + artifactId = "asm-parent"; + groupId = "org.ow2.asm"; sha512 = "2vysz9nn1pn1qzd40n7d2njmcpz7qi37pi73k9ajjmmbzwza6h8gc1pvadfqxlnih47gzc1wn3hqrc1sqd3b84kh8nrznwjcp10y0lf"; type = "pom"; }; backportUtilConcurrent_3_1 = fetchMaven { version = "3.1"; - baseName = "backport-util-concurrent"; - package = "/backport-util-concurrent"; + artifactId = "backport-util-concurrent"; + groupId = "backport-util-concurrent"; sha512 = "38i04cb0dggdjjsvl32wpxfbczl1d696nlpzissjlq9ya197rwa0g0704p7vz71xsylvpdjssb0cyx916xsigcyb95k8c84b2hmdhvr"; type = "pom"; }; beanshell_2_0_b4 = fetchMaven { version = "2.0b4"; - baseName = "beanshell"; - package = "/org/beanshell"; + artifactId = "beanshell"; + groupId = "org.beanshell"; sha512 = "2xwgqmfwli40lvlgjx00ki5zm1290jhjvqg7wnq869kxkw9iam239zxb0jz46jcpbgy10qg6sd86cjw5g38njywcz33501f6byd0n3w"; type = "pom"; }; codehausParent_4 = fetchMaven { version = "4"; - baseName = "codehaus-parent"; - package = "/org/codehaus"; + artifactId = "codehaus-parent"; + groupId = "org.codehaus"; sha512 = "11dacs4155xc3rn3crdayg1yp15abw81lbk6qwi7207009rnyk1kxvs56am9pllkybgja53ri0k084k2ppp4dlhxrg6w3zccbafxlgp"; type = "pom"; }; commonsParent_11 = fetchMaven { version = "11"; - baseName = "commons-parent"; - package = "/org/apache/commons"; + artifactId = "commons-parent"; + groupId = "org.apache.commons"; sha512 = "3986i0mnawni27fqf74zfb1n9wvyn502nvslfmbwz5m3rgvhfdb7r1wj7qz8g3wznfvh3wd99h83d94300yvy6cilqy5sj9gfwxk3jv"; type = "pom"; }; commonsParent_17 = fetchMaven { version = "17"; - baseName = "commons-parent"; - package = "/org/apache/commons"; + artifactId = "commons-parent"; + groupId = "org.apache.commons"; sha512 = "31ijvmfj2yybfy0n4qh7ga8192wg75hs5v26vwm98hgvlppxs9irik4qlqzh4iqq0azp0xl8idz6nn6yb9vzsjxax4c3v5wyk3yvyfy"; type = "pom"; }; commonsParent_22 = fetchMaven { version = "22"; - baseName = "commons-parent"; - package = "/org/apache/commons"; + artifactId = "commons-parent"; + groupId = "org.apache.commons"; sha512 = "1sm8g7iwyc5gi4w73yx3p1f1l81kw8d5wzqzqgdgy7k7hfvmsxlm5r9n99h9r0g5y494ad46hjzf8cwjf8am4rv0qzhrmsqkxyd24wk"; type = "pom"; }; doxia_1_0_alpha6 = fetchMaven { version = "1.0-alpha-6"; - baseName = "doxia"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia"; + groupId = "org.apache.maven.doxia"; sha512 = "0ya69g2xfzawf30r2n45n85h2bag0ihd2cbkd0896ykwndx62jyagc594f9pkvb8x9vwgq1dkhfc5lfw1sjcmsxm9dmyzvy2nmykpsy"; type = "pom"; }; doxia_1_0_alpha7 = fetchMaven { version = "1.0-alpha-7"; - baseName = "doxia"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia"; + groupId = "org.apache.maven.doxia"; sha512 = "0fg3l7dyi0c7r1h9rzjn23gv57kc67jpzlcji6yh4nawp3byfbz1rq8wnbj3av3wd29v9h2ff34p06ia9wxbs8q3kz4xy31w7sw7fxg"; type = "pom"; }; doxia_1_0_alpha10 = fetchMaven { version = "1.0-alpha-10"; - baseName = "doxia"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia"; + groupId = "org.apache.maven.doxia"; sha512 = "3by91czdkjn4myc6xwzap37ydmhvic4myr8p2zflnpawrph00jkz9pivd84k2qykvmc5gxzbmklf1inwvkq1f5bsyhh440mlvsfsn1s"; type = "pom"; }; doxia_1_0 = fetchMaven { version = "1.0"; - baseName = "doxia"; - package = "/org/apache/maven/doxia"; + artifactId = "doxia"; + groupId = "org.apache.maven.doxia"; sha512 = "3z04h87dwn5panpr68ajzflw5n4wgi98isl5snz6vrd2vz9744fdqggmn6698wljw9h4pzkvjyrxf9b7w4km6w7kma28akvn951vw99"; type = "pom"; }; enforcer_1_3_1 = fetchMaven { version = "1.3.1"; - baseName = "enforcer"; - package = "/org/apache/maven/enforcer"; + artifactId = "enforcer"; + groupId = "org.apache.maven.enforcer"; sha512 = "1m84z5x2gxlbj9bl2jrfzh26pl7nz1d79sv72clp565z4lr2r1abih2c7aigbd95zik948dqrbh2vzm7vp1iv0d23vk89rx4nmfg0rv"; type = "pom"; }; googleParent_1 = fetchMaven { version = "1"; - baseName = "google"; - package = "/com/google"; + artifactId = "google"; + groupId = "com.google"; sha512 = "22whj7li6dvh4xjcdx1hwlh13ar8c8d9snal6ynnbsd566n9g0kif2fx75q5j4kwmqzb2yj3c3vxdfzg82650gkyvjm2x6cb35vdi30"; type = "pom"; }; hamcrestParent_1_3 = fetchMaven { version = "1.3"; - baseName = "hamcrest-parent"; - package = "/org/hamcrest"; + artifactId = "hamcrest-parent"; + groupId = "org.hamcrest"; sha512 = "1da3ivp9n1h3hl35vhgd7avi4xh8p0802qj7xrk93gbz01s2av28p6ycdwiwp7kja0151wm5jvbgpnkxd8azqwkh7dh83w22k7jpwh3"; type = "pom"; }; jclOverSlf4j_1_5_6 = fetchMaven { version = "1.5.6"; - baseName = "jcl-over-slf4j"; - package = "/org/slf4j"; + artifactId = "jcl-over-slf4j"; + groupId = "org.slf4j"; sha512 = "3ync9p7ws4p8p494jifarwpqblmbkkl6r6rw4bms8fk6ija0ifxn6q5za3pxvp690p5lzw2zkgidr51rqxk8w1ms69pb1nib1r4j578"; type = "pom"; }; maven_2_0_1 = fetchMaven { version = "2.0.1"; - baseName = "maven"; - package = "/org/apache/maven"; + artifactId = "maven"; + groupId = "org.apache.maven"; sha512 = "02n3kpll7w5iqaijawmm4rzr35sbv826c9vp1fzfnrgbvpfw22yrsjv2z416pzk2qyjh3wx7pc5xxxxdchmpzcxm694vsdl67ki2rrz"; type = "pom"; }; maven_2_0_6 = fetchMaven { version = "2.0.6"; - baseName = "maven"; - package = "/org/apache/maven"; + artifactId = "maven"; + groupId = "org.apache.maven"; sha512 = "2k58pvcrdc52zsq6id4vl8a45srxllm2m49namqkzix4356haphk3i06px9jcc2cmkqw7bcpqh5xvvmkds5vhp2b9y9b0i2lcfgx8jw"; type = "pom"; }; maven_2_0_8 = fetchMaven { version = "2.0.8"; - baseName = "maven"; - package = "/org/apache/maven"; + artifactId = "maven"; + groupId = "org.apache.maven"; sha512 = "0mzlba0vbanxvdgfvj3kq6xw211j40b6hk6w0b7lc686m2c26vgxks9iisgm10888lq140i6510813326bs9yb053hqfvnz3m72lkss"; type = "pom"; }; maven_2_0_9 = fetchMaven { version = "2.0.9"; - baseName = "maven"; - package = "/org/apache/maven"; + artifactId = "maven"; 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type = "pom"; }; mavenParent_6 = fetchMaven { version = "6"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "2z9rkv875yx64mpbf1mgyb3hcxqbhr0ndczwqlmkgd05a679d4vyi92fndaz1bcfwc5bmmxf4s6zrg58swv05j2j9d6vqd2b0x385dq"; type = "pom"; }; mavenParent_8 = fetchMaven { version = "8"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "315cgnn7mvwq5kyrln3nw85x3893zdd4dg267gk9xkig1mwjpa86l6yyd6qnrwxywcrgn0wmn2l781yvwip9rys4dd9jmbma2qhzapp"; type = "pom"; }; mavenParent_11 = fetchMaven { version = "11"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "21lz2qb0sl9akirk7fcbj7ldfgnq5nqy90s3hfvmfvz2spk1ppa5yq3702m7z72l3jpbm9vrcm4dvarar314lwjp3477p558gwcpkqf"; type = "pom"; }; mavenParent_13 = fetchMaven { version = "13"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "0vgjwpmnvcjfif84s5x19ixlxg4413mfma9f10v7klv88b08vwvkpwjnffgzrlqvp5524d8zyswshqkwpdqb0klgppxiipd52d546vw"; type = "pom"; }; mavenParent_15 = fetchMaven { version = "15"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "390z5v0nygsw075fa5jzl5baxb0bripiiy6arqk550zlg8dw8mcg6cyscwnh3zw4gxyr1qbcy0v8wsj375xc65i2agkzg1qbv5z6xxp"; type = "pom"; }; mavenParent_21 = fetchMaven { version = "21"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "2dph51qjkmh9sixd12rgxhrvl3w5r7nmr4n3ra4y1lifml6h0md0indj3qw4lxm0db811p3hxf2f9l0gf6w4q5ypjp20lk9ia2xm5s0"; type = "pom"; }; mavenParent_22 = fetchMaven { version = "22"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "112xv5inpan05vkm12g2lpz37pgga1nm8rar2bqhibvwljg4yv1myx8z99g0nkd3gzbgw5098aagm006w6bnmwsibwd1js8is5d4r88"; type = "pom"; }; mavenParent_23 = fetchMaven { version = "23"; - baseName = "maven-parent"; - package = "/org/apache/maven"; + artifactId = "maven-parent"; + groupId = "org.apache.maven"; sha512 = "3c6ydqi3sf5aq3aj42kxgrjpcf8wpl0rf6hmr6vkas04w0h4dyvjb78ipyxsqzqgzjm6cmdfhxzx8hjb2lwvy3ipf1x39j6cj7dwdy8"; type = "pom"; }; mavenPlugins_22 = fetchMaven { version = "22"; - baseName = "maven-plugins"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-plugins"; + groupId = "org.apache.maven.plugins"; sha512 = "14xy4s69dvqllkspc5b8q1gdbi0wn494ghwcdfcvjzvgczjhhxbr1h698amv3zmg59gb7liz77ws4vmcar8j9lazywcv13cy1myiywa"; type = "pom"; }; mavenPlugins_23 = fetchMaven { version = "23"; - baseName = "maven-plugins"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-plugins"; + groupId = "org.apache.maven.plugins"; sha512 = "1vh7izahb4sskja66hqrygv1r8iwpl97kp65yx6z3fnm761brag89fdcl4jl9hypvm57alf283gvq9rsy5kqnqcdki20k5vw26y1b1a"; type = "pom"; }; mavenPlugins_24 = fetchMaven { version = "24"; - baseName = "maven-plugins"; - package = "/org/apache/maven/plugins"; + artifactId = "maven-plugins"; + groupId = "org.apache.maven.plugins"; sha512 = "07flf37pkkc34466bnzi4rfwdlgvd3ydasm39qzy2hybxv26306zrhipglmgsjvd84z07dscij4n7qdd2jkx9hrkm900hid4xwvxzrs"; type = "pom"; }; mavenPluginTools_3_1 = fetchMaven { version = "3.1"; - baseName = "maven-plugin-tools"; - package = "/org/apache/maven/plugin-tools"; + artifactId = "maven-plugin-tools"; + groupId = "org.apache.maven.plugin-tools"; sha512 = "2410rvvhnpwdg67slwb05v7vnpbvq00d36mbsc77parw4v9n3sr1hqai803g8q54lzv05zzcm7knkjv5ip5wcbvzrh0dr4f5lm904wy"; type = "pom"; }; mavenPluginTools_3_2 = fetchMaven { version = "3.2"; - baseName = "maven-plugin-tools"; - package = "/org/apache/maven/plugin-tools"; + artifactId = "maven-plugin-tools"; + groupId = "org.apache.maven.plugin-tools"; sha512 = "28qhbacsb69rcp86l3lkc3d83267qdwwpl0zm134rxi58wy4y4rd8nz2yzk6yx4x8h0drq776b2qnr4ps1da1ybsvsi2sc655scx3lf"; type = "pom"; }; mavenReporting_2_0_1 = fetchMaven { version = "2.0.1"; - baseName = "maven-reporting"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting"; + groupId = "org.apache.maven.reporting"; sha512 = "3ns0j0w3g3xzvi4y2nbz7yl3w0bq6npvkpy56c2s2m8z0b0007vw97qm3z7b6iicwck69g9001qqqanhzr35x1qbzlqzrx5v271hvfa"; type = "pom"; }; mavenReporting_2_0_6 = fetchMaven { version = "2.0.6"; - baseName = "maven-reporting"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting"; + groupId = "org.apache.maven.reporting"; sha512 = "3bi678sg28yxhlby4d3a6mq9fhg1qnjb57kbkhi7dfx9g0c1p6cxhg8cixjz9wv31lkjpspbpp1fq0z29a93lqrjqczlg8a7i1sg554"; type = "pom"; }; mavenReporting_2_0_9 = fetchMaven { version = "2.0.9"; - baseName = "maven-reporting"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting"; + groupId = "org.apache.maven.reporting"; sha512 = "0cg49pq6rvk7c84xwnpq2p47b7y973sy9qfgzcq06bnrqm6cj26h8k7d9kpp3q3rd2hlw10db4sjfx0crlai27cbbz41i5m22lq21s5"; type = "pom"; }; mavenReporting_2_2_1 = fetchMaven { version = "2.2.1"; - baseName = "maven-reporting"; - package = "/org/apache/maven/reporting"; + artifactId = "maven-reporting"; + groupId = "org.apache.maven.reporting"; sha512 = "02gs0nk2hihvayh7gxn1ncbq7nq1hbpr40whby6c58adk7g6jq3cn84fi8svcv10w915f696drav1cimjpizcyjn00if1iql59dmfda"; type = "pom"; }; mavenSharedComponents_7 = fetchMaven { version = "7"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "35zwvraafv86jpyfvfmi76n9bzmahq5z90j9axb3b6d0wfvildz5qb43kw27si2ldwghiwsfh2jikd3gf9ms553pfillf4baab13dp6"; type = "pom"; }; mavenSharedComponents_11 = fetchMaven { version = "11"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "3g30bgx3nhw1pwq5nq7ns17vs53cck3zrk6b4sqh56my7vhdv08v0n94l326q9f51sxvnsn11zmpnn8zri8hz2ci1g61ymgi2d0mxyd"; type = "pom"; }; mavenSharedComponents_12 = fetchMaven { version = "12"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "1x5q96gigd54qp60i20kvmwi604ga55fc70gkz1nwn5fjmy36rlxldhhdij3kcpnxpwqp4dwxq717ai8rqv3lzjif8pxd06wzmz0q09"; type = "pom"; }; mavenSharedComponents_17 = fetchMaven { version = "17"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "3f2pifiapx09h3wv9lglm0mkd9gid268lfz27jhqb4ck2yxna31872db7cj5c9lsg0pl2l3bwgp526whq14zj2qffqxrdq8mn9m0rhy"; type = "pom"; }; mavenSharedComponents_18 = fetchMaven { version = "18"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "2qqabrvgs4kb14v28qkfwj16n715mj5mh4m8aw0dybi5igmrvwh1d8jsjggdfbh929m6499w8x5s6aw0gbzmfzr3wjkz54dqxnm49p0"; type = "pom"; }; mavenSharedComponents_19 = fetchMaven { version = "19"; - baseName = "maven-shared-components"; - package = "/org/apache/maven/shared"; + artifactId = "maven-shared-components"; + groupId = "org.apache.maven.shared"; sha512 = "1na6rh2mlwq6yrg7jxxnkcjj4ki0lqcihwiq2cy2ygsd6q0z8fn755frrd1j1jvd5dnh8jxjqp1m5mpwwv13hxhy8lmq95a5pp2a2qh"; type = "pom"; }; mojoParent_32 = fetchMaven { version = "32"; - baseName = "mojo-parent"; - package = "/org/codehaus/mojo"; + artifactId = "mojo-parent"; + groupId = "org.codehaus.mojo"; sha512 = "15pzaqpdcr8c2w2b2ms3qc5d3r0flmzqav6h45nmg1l8nv7529lp6dkilhkwqag1i94vh8dvqnkxm475j9v2hxmz981azrvz7984z8w"; type = "pom"; }; ow2_1_3 = fetchMaven { version = "1.3"; - baseName = "ow2"; - package = "/org/ow2"; + artifactId = "ow2"; + groupId = "org.ow2"; sha512 = "1jqfqqmh19lvrjk45zzzp895jbxb8giw8sn1qdvwhh1yqxr1z5vkv98n4g0ib2l359qmb9fal4d21ba57zmbl0rqxqlggv9c5l87gfs"; type = "pom"; }; plexus_1_0_4 = fetchMaven { version = "1.0.4"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "22zsqss9aws73zvgqaz1brnvhk8bqn0flzd644nikprbb9dh1jyv1jig7xaxj942wq1w8h6ybx6b3v1ysfr8kw1z70sb5yrb4zd4kkm"; type = "pom"; }; plexus_1_0_8 = fetchMaven { version = "1.0.8"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "1nwv49smddfvqn1fhi8aj993pkzsxa033a9g97z7sc3aia5wzwz86azzyrklgxywc26c3k3mw8vfzv758rv3v7cn0hfmyfzfkrg8vwp"; type = "pom"; }; plexus_1_0_11 = fetchMaven { version = "1.0.11"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "20fb1yvg26wg3lih55m8m4i1idiffyg3jlkvazmxqqvnahz2llgd5cfvqcrzg8lkinnypr4ic5glci4lza46k1sfl5nrviyfx0n7kgr"; type = "pom"; }; plexus_1_0_12 = fetchMaven { version = "1.0.12"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "2ckzb1z4hgmp2r61a05v3aqapkfnyfs4b7wrf60aiymrz57kliyq3nn50h7bj6ak9hlpyzxpqgqps0chzfpizr8v0abdkjmbplvw2ai"; type = "pom"; }; plexus_2_0_2 = fetchMaven { version = "2.0.2"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "095kxnh9238wlnxsbsl7wj3zsp2ijwx8p8bvbmsvj3iacw9fsvddv263j485zfjf4ipvp5dwqc3sc8mqkwbhx1qj7k1x1hj14nl6r8z"; type = "pom"; }; plexus_2_0_3 = fetchMaven { version = "2.0.3"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "15adqpm0gz7c0jwjd4yk0k8h4h7vnz15v1fdmzb6rgs6avl1dx84r5l0fqs6b02kw008rg68inii7nl4m5xwqrj807wr8qzrjm02cam"; type = "pom"; }; plexus_2_0_6 = fetchMaven { version = "2.0.6"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "07rrw1yldy4c2qvwv3hcf9rdbr0jf57qsnnv2ai9fajwhjyjkgjixm2zlsid41bm2w8hacg9crzy6nfz8yh1sdh5p767niy9jripq2h"; type = "pom"; }; plexus_2_0_7 = fetchMaven { version = "2.0.7"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "2ddbjp60y8g7n56hya5qa59f980a8sdj0d1dicv3na3pbc6k4wgdrix78lgg32sp4fzmxl7fyzw9gy3z2vpzf65zkj3c9yh030jcysr"; type = "pom"; }; plexus_3_0_1 = fetchMaven { version = "3.0.1"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "3rjh4msw1qjpj0vmc90f89zjkzcyahzh93jrpw25qb2wn0v18jgw65g0ai7ynssdh113kxi816syqcw8vbqwvhlr2b0acrmszy0jnps"; type = "pom"; }; plexus_3_1 = fetchMaven { version = "3.1"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "1zyyzy6zvf73bnv8c76x2lmffllqqrgk1k8kpravcrd809acfslip1w7w8kr0rg3sc7554875wsq8fbhq3zdvxwjpzwgz4l5rjr3lmr"; type = "pom"; }; plexus_3_2 = fetchMaven { version = "3.2"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "07y1vwz55l9yzfhix5w5fw5xvdj854c1ri1wws6r23xzyp5bqwrrz0x5ln26w05w78vpj1rvrq1mkk192vfr80si3ccr063aschf6ld"; type = "pom"; }; plexus_3_3_1 = fetchMaven { version = "3.3.1"; - baseName = "plexus"; - package = "/org/codehaus/plexus"; + artifactId = "plexus"; + groupId = "org.codehaus.plexus"; sha512 = "1q1p0sfzkhdpknaf0ysq7vzd0qip9q86z62nwamfh9gdsp7lh99kh6hmxav2daha462c3jra6clfniyqrbvs07jwjhf4c79rwhnqc2q"; type = "pom"; }; plexusCipher_1_4 = fetchMaven { version = "1.4"; - baseName = "plexus-cipher"; - package = "/org/sonatype/plexus"; + artifactId = "plexus-cipher"; + groupId = "org.sonatype.plexus"; sha512 = "1m4f7n6ch8gbwgvz7h8iab0jkan8ws3qq9776qc10k0kj6i3227kskk5s8pxlq9vrxw498jmjnkiga41fy33khrgvsvls2hrj9vv1g1"; type = "pom"; }; plexusCompiler_2_2 = fetchMaven { version = "2.2"; - baseName = "plexus-compiler"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-compiler"; + groupId = "org.codehaus.plexus"; sha512 = "26sr1hg214qf65nym85viv1z4nk1bgqahx7n4bq3did49s9ymgz2c08vw7zdlcqws5jndz9n2xlyq285plgv3xx2mxrrsi2r24zmw29"; type = "pom"; }; plexusCompilers_2_2 = fetchMaven { version = "2.2"; - baseName = "plexus-compilers"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-compilers"; + groupId = "org.codehaus.plexus"; sha512 = "0yvvc8mdz1vd7mpw9h568mhlfxh3qpbz4qpyr5iw7f5ifm46gxsmnfd36ah6mn9hxh6lpra3mi536y5cv1k5mrbr128a1lwyr8p14rg"; type = "pom"; }; plexusComponents_1_1_4 = fetchMaven { version = "1.1.4"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "02kdl9z8nz26h4qf9mrdm8s1y2gy1f57n825yy0y3qifavlv51k2yxza7mjsdl1dwrq84c4qlj79iqlisnhrppfy0ncbbblnbir1yln"; type = "pom"; }; plexusComponents_1_1_6 = fetchMaven { version = "1.1.6"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "1m6f5xzp6mk1n0svznqc8l5x3klr9kk75223ms31q65llx765dxvrsmkjlzgshb0ipb9nfxwk9hs5fvf5dgh0xlzrnc1w2pnqdi8jnh"; type = "pom"; }; plexusComponents_1_1_7 = fetchMaven { version = "1.1.7"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "2mh1qfbaf6f6nv0nj0g8skgv82jv1l2zg7iivd2jjrzrwnpkc58ajfl1wmylwpz035d9dd713h9szkwy2hdd6pardbc4ja2w4qv5s91"; type = "pom"; }; plexusComponents_1_1_14 = fetchMaven { version = "1.1.14"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "2gf578c23wz38cnjnp8w80b6hzmfnzrv6is1yf52qrfcijk84fnj4k8wrqg0jms9yz6l5rkkv40zm2j7kkbxgn862mnh4i4qxcb604g"; type = "pom"; }; plexusComponents_1_1_15 = fetchMaven { version = "1.1.15"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "0lfzdq1wlsnkiapzjs8cqi2kzkaw9lfjhdhmf1pz2x83m5njfx2y59v14wgcs2k4cig8kjr45v4qnmd7mp03k8gginzflc1qi1y7yv6"; type = "pom"; }; plexusComponents_1_1_19 = fetchMaven { version = "1.1.19"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "01mllmbwfrimvsgmc3wfxp60nm999xa4abp0ywpxdrvbb88dwr4g7sg3mlz22xhc8pky72mif882ppgrdxj01lx3lmm84p3g5f51bii"; type = "pom"; }; plexusComponents_1_3_1 = fetchMaven { version = "1.3.1"; - baseName = "plexus-components"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-components"; + groupId = "org.codehaus.plexus"; sha512 = "16bnfja035zb508f340y64v4vk7pkldn8bvnxvbk0grk8a76rirsn4dl60x3hgmasgkb0y75gr9qp4y72m079klhgg0mbvcfvslkxqb"; type = "pom"; }; plexusContainers_1_0_3 = fetchMaven { version = "1.0.3"; - baseName = "plexus-containers"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-containers"; + groupId = "org.codehaus.plexus"; sha512 = "39sw2lxlrgbj1zlf67qz14j53sxd45p1qmna5cfizqikrwiqrnb6xwdxr2rsp3h2kadwwpz6id2ls6x3hr93znkad404rg4lg11v9nj"; type = "pom"; }; plexusContainers_1_5_5 = fetchMaven { version = "1.5.5"; - baseName = "plexus-containers"; - package = "/org/codehaus/plexus"; + artifactId = "plexus-containers"; + groupId = "org.codehaus.plexus"; sha512 = "1dzg3ry73scisq02p1c96rn04rvdpyf9v6cbvvmy6hvcaw11y8mmjwjnlayljhr9za5hhq5bwv2vssmp683v3qjr5750f9aa62jxw0w"; type = "pom"; }; plexusSecDispatcher_1_3 = fetchMaven { version = "1.3"; - baseName = "plexus-sec-dispatcher"; - package = "/org/sonatype/plexus"; + artifactId = "plexus-sec-dispatcher"; + groupId = "org.sonatype.plexus"; sha512 = "09blh68dwrh3zix33cbfbvmxbbm7ck80pwp9x4v1ilf11y6hgm065jx39viqm0zlr86kwngrlm4skrgjw5v67aj2q7d7kd5jgj5s0qc"; type = "pom"; }; sisuInject_2_1_1 = fetchMaven { version = "2.1.1"; - baseName = "sisu-inject"; - package = "/org/sonatype/sisu"; + artifactId = "sisu-inject"; + groupId = "org.sonatype.sisu"; sha512 = "0720p7ai7l1wqs2rfcgpvgd1rc3p2bdpp51a57jmqbgh9msr54iy0c6n0ipybd9lrl88iz4l8cc1s73qj5appf8r481bbwgv4wxi19v"; type = "pom"; }; sisuInjectGuiceBean_2_1_1 = fetchMaven { version = "2.1.1"; - baseName = "guice-bean"; - package = "/org/sonatype/sisu/inject"; + artifactId = "guice-bean"; + groupId = "org.sonatype.sisu.inject"; sha512 = "2arva9197d03whnavfspz8wm7fw8iqrhacp10984lxwig221m34p5bb9vmhn8bbswf7d8whzf9q5lsq9mxbmd2c90kc1m7n7qja6qq5"; type = "pom"; }; sisuInjectGuicePlexus_2_1_1 = fetchMaven { version = "2.1.1"; - baseName = "guice-plexus"; - package = "/org/sonatype/sisu/inject"; + artifactId = "guice-plexus"; + groupId = "org.sonatype.sisu.inject"; sha512 = "0gspz9n6vbnlbx33xynm4sg0wxlr89i8490gcl0y0qw6mvjjqfwv1dqgncm9xp41mb21i00gxq0ml6d4wfr0sdayk9m736b826lrvq4"; type = "pom"; }; sisuParent_2_1_1 = fetchMaven { version = "2.1.1"; - baseName = "sisu-parent"; - package = "/org/sonatype/sisu"; + artifactId = "sisu-parent"; + groupId = "org.sonatype.sisu"; sha512 = "2z006ib6azrxf5s02ixv5plc1db0rglnv2m8k4il0s144v63ay98wjxawcc1chld64iribhhby6wnlv2fxvv8sl9mr03qb2q2isflgc"; type = "pom"; }; slf4jApi_1_5_6 = fetchMaven { version = "1.5.6"; - baseName = "slf4j-api"; - package = "/org/slf4j"; + artifactId = "slf4j-api"; + groupId = "org.slf4j"; sha512 = "3ahxd5zfxpwrp97yq74xfhrh02a7hnmcdxk5rwjn4v5hcms9b98iizsgd2ssjxa1vy784jh45f6k8qby1c1bdcwk9y18mkcw79zhl2n"; type = "pom"; }; slf4jJdk14_1_5_6 = fetchMaven { version = "1.5.6"; - baseName = "slf4j-jdk14"; - package = "/org/slf4j"; + artifactId = "slf4j-jdk14"; + groupId = "org.slf4j"; sha512 = "11yiy09mlm5dq2ir05n97nka3sqwn48k47x4d2vqmgjsk3vz255m8ilxvq5hjjzygyw0prcrp4zbwkphb5his00pw8f4hczd1w16nvr"; type = "pom"; }; slf4jParent_1_5_6 = fetchMaven { version = "1.5.6"; - baseName = "slf4j-parent"; - package = "/org/slf4j"; + artifactId = "slf4j-parent"; + groupId = "org.slf4j"; sha512 = "036cizr5vh557l65jiv706iiy1q1s3lkr1xqa1hd5yspawd111d5iq8q3qdsw07c3rmxq7n9sflgcj08bhs149ni119fdr7hn9cx0nl"; type = "pom"; }; sonatypeForgeParent_3 = fetchMaven { version = "3"; - baseName = "forge-parent"; - package = "/org/sonatype/forge"; + artifactId = "forge-parent"; + groupId = "org.sonatype.forge"; sha512 = "20x89zl6k0wgd1gb6ysxm6bmgqxwyz3d7zyjn8bwzkz93k7lxnxm0k7skvha283q9ay4cd2vkjisi5avl1f3wvz89rrwg136gmdlksv"; type = "pom"; }; sonatypeForgeParent_4 = fetchMaven { version = "4"; - baseName = "forge-parent"; - package = "/org/sonatype/forge"; + artifactId = "forge-parent"; + groupId = "org.sonatype.forge"; sha512 = "0j13rfddklh25sdwppxvdn97y3l8vy809g2w5zpflh74v0rh0q04ylm3j2nj5hf3ypmgx3lhdp161jbv3l47gl7gh60fk3rnq17kfbq"; type = "pom"; }; sonatypeForgeParent_5 = fetchMaven { version = "5"; - baseName = "forge-parent"; - package = "/org/sonatype/forge"; + artifactId = "forge-parent"; + groupId = "org.sonatype.forge"; sha512 = "1l3nll0i5cpf2rh5f4gqriwy2737n9sccr605nx1swn1qafbxbvvs4jl7argdzz0mkzrr8sir7vnksm9a273vrdica9l35nxivm6vrx"; type = "pom"; }; sonatypeForgeParent_7 = fetchMaven { version = "7"; - baseName = "forge-parent"; - package = "/org/sonatype/forge"; + artifactId = "forge-parent"; + groupId = "org.sonatype.forge"; sha512 = "3l6c336cm6wnrw2l7lr0wg83w1304bggvw4qydh5bqbbyfpdgwqa3pbfkq4x760k3wqwarnlpf31fz2dp6abrynjl4rr1lv68j1hhyn"; type = "pom"; }; sonatypeForgeParent_10 = fetchMaven { version = "10"; - baseName = "forge-parent"; - package = "/org/sonatype/forge"; + artifactId = "forge-parent"; + groupId = "org.sonatype.forge"; sha512 = "3fpnvrxfkxpxqdsn6g7w1zyql4v0z9iqbjprhh4c6rldrbvq4h3yh7dl5sw4h7av516zhmb3bkc9ycfdr5gs34sfb6f6x5hk7qc374a"; type = "pom"; }; sonatypeParent_7 = fetchMaven { version = "7"; - baseName = "oss-parent"; - package = "/org/sonatype/oss"; + artifactId = "oss-parent"; + groupId = "org.sonatype.oss"; sha512 = "3xk0q7y2kdarr3l42dqjzq9qz1r840abqw9zhvl4gpc8jw5xcbqd781fp8z41i3hrkyaf740f2kppji9l77ci7f759d5s9yg4grbc33"; type = "pom"; }; sonatypeSpiceParent_10 = fetchMaven { version = "10"; - baseName = "spice-parent"; - package = "/org/sonatype/spice"; + artifactId = "spice-parent"; + groupId = "org.sonatype.spice"; sha512 = "0gg2cxqvfmg6jk7qi2f4hcgskpd1ysnf1d5vay8dza40wfbk2vy7qvhgjhg55dpbjkadmsj483hg81qdzwqbxmagd2xr9j9062hbja8"; type = "pom"; }; sonatypeSpiceParent_12 = fetchMaven { version = "12"; - baseName = "spice-parent"; - package = "/org/sonatype/spice"; + artifactId = "spice-parent"; + groupId = "org.sonatype.spice"; sha512 = "3bx63k5frr99ma5wcjlqlym7qr6x1m031hns35rpvz039s9cxcn8r3f7slwqaa7s19i3j46kwgxirnhs4ylcddql4rsibaqjwy9lh0d"; type = "pom"; }; sonatypeSpiceParent_16 = fetchMaven { version = "16"; - baseName = "spice-parent"; - package = "/org/sonatype/spice"; + artifactId = "spice-parent"; + groupId = "org.sonatype.spice"; sha512 = "0awfi8vf4xc5c9510sas7xqlik4g8ljivay372cksvlcwlgyrgliikak0xxbxj72df5b9jzc9fzvjxd9rlllnnlnm4zllw5p2hakb0g"; type = "pom"; }; sonatypeSpiceParent_17 = fetchMaven { version = "17"; - baseName = "spice-parent"; - package = "/org/sonatype/spice"; + artifactId = "spice-parent"; + groupId = "org.sonatype.spice"; sha512 = "1jqqp5xylm9bjz33wab7mj49xqczvkhpp4aysrcngszxmil61kanpjmn5ks5r0hq4waj0bqnr91p2p9a7ylqnqjs6ib1x9psl5c9cyw"; type = "pom"; }; surefire_2_12_4 = fetchMaven { version = "2.12.4"; - baseName = "surefire"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire"; + groupId = "org.apache.maven.surefire"; sha512 = "1zyppjqqwpzcp16g7v49r9fsgdvrny325r583kpis5497ic0qbcczxn53x7s1hnmhgcs33dr0k3alrwl7m574lm2qdgj0s8x18pl6gb"; type = "pom"; }; surefire_2_17 = fetchMaven { version = "2.17"; - baseName = "surefire"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire"; + groupId = "org.apache.maven.surefire"; sha512 = "3yraw37xwayyrvwa62y6li3wbzrha08j389psz16j1dawxmg78zlm2x1jmgz3nzdb60n9kk143606bgs3vrf7ri9d5pwkg9lvw7hk92"; type = "pom"; }; surefireProviders_2_12_4 = fetchMaven { version = "2.12.4"; - baseName = "surefire-providers"; - package = "/org/apache/maven/surefire"; + artifactId = "surefire-providers"; + groupId = "org.apache.maven.surefire"; sha512 = "08di6wgiihz9svrdpkdvhlipdp83byd1s844fnjqfk3z0g5a72lpq718zy27rk41jma3hclmr4pv0g5dvbhf3v8hy92iby8w5rcxv5x"; type = "pom"; }; xbean_3_4 = fetchMaven { version = "3.4"; - baseName = "xbean"; - package = "/org/apache/xbean"; + artifactId = "xbean"; + groupId = "org.apache.xbean"; sha512 = "2qdd1srj7ahskmxp1cb3gkxgdmy0ms4m5mi43mvfrl085fp58f67ip2y0w4r0xfwzds12727yili6hciiwix9i6hx7wasi5sa9djcp6"; type = "pom"; }; diff --git a/pkgs/development/java-modules/sisu/guice.nix b/pkgs/development/java-modules/sisu/guice.nix index 9fb70fad446..51a004ed545 100644 --- a/pkgs/development/java-modules/sisu/guice.nix +++ b/pkgs/development/java-modules/sisu/guice.nix @@ -3,8 +3,8 @@ rec { sisuGuice_2_9_4 = map (obj: fetchMaven { version = "2.9.4"; - baseName = "sisu-guice"; - package = "/org/sonatype/sisu"; + artifactId = "sisu-guice"; + groupId = "org.sonatype.sisu"; suffix = "-no_aop"; sha512 = obj.sha512; type = obj.type; diff --git a/pkgs/development/java-modules/sisu/inject-bean.nix b/pkgs/development/java-modules/sisu/inject-bean.nix index fba7130cfbd..bca16ccd114 100644 --- a/pkgs/development/java-modules/sisu/inject-bean.nix +++ b/pkgs/development/java-modules/sisu/inject-bean.nix @@ -3,8 +3,8 @@ rec { sisuInjectBean_2_1_1 = map (obj: fetchMaven { version = "2.1.1"; - baseName = "sisu-inject-bean"; - package = "/org/sonatype/sisu"; + artifactId = "sisu-inject-bean"; + groupId = "org.sonatype.sisu"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/sisu/inject-plexus.nix b/pkgs/development/java-modules/sisu/inject-plexus.nix index 73335ec951e..0a181dc1a1e 100644 --- a/pkgs/development/java-modules/sisu/inject-plexus.nix +++ b/pkgs/development/java-modules/sisu/inject-plexus.nix @@ -3,8 +3,8 @@ rec { sisuInjectPlexus_2_1_1 = map (obj: fetchMaven { version = "2.1.1"; - baseName = "sisu-inject-plexus"; - package = "/org/sonatype/sisu"; + artifactId = "sisu-inject-plexus"; + groupId = "org.sonatype.sisu"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/xerces/impl.nix b/pkgs/development/java-modules/xerces/impl.nix index 7b04e21f50e..11295b3128f 100644 --- a/pkgs/development/java-modules/xerces/impl.nix +++ b/pkgs/development/java-modules/xerces/impl.nix @@ -3,8 +3,8 @@ rec { xercesImpl_2_8_0 = map (obj: fetchMaven { version = "2.8.0"; - baseName = "xercesImpl"; - package = "/xerces"; + artifactId = "xercesImpl"; + groupId = "xerces"; sha512 = obj.sha512; type = obj.type; }) [ diff --git a/pkgs/development/java-modules/xml-apis/default.nix b/pkgs/development/java-modules/xml-apis/default.nix index 44044a35a57..a96e3670b40 100644 --- a/pkgs/development/java-modules/xml-apis/default.nix +++ b/pkgs/development/java-modules/xml-apis/default.nix @@ -3,8 +3,8 @@ rec { xmlApis_1_3_03 = map (obj: fetchMaven { version = "1.3.03"; - baseName = "xml-apis"; - package = "/xml-apis"; + artifactId = "xml-apis"; + groupId = "xml-apis"; sha512 = obj.sha512; type = obj.type; }) [ From 9d8ad57abc5462edb246bc6a27f38cc7cf777a02 Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Sat, 18 Feb 2017 13:53:46 -0600 Subject: [PATCH 013/216] llvm-4.0: init at rc2 in preparation for release. Also adds 'lld'. --- .../compilers/llvm/4.0/clang/default.nix | 56 +++++++++ .../compilers/llvm/4.0/clang/purity.patch | 16 +++ .../compilers/llvm/4.0/default.nix | 51 ++++++++ .../compilers/llvm/4.0/libc++/darwin.patch | 39 ++++++ .../compilers/llvm/4.0/libc++/default.nix | 40 ++++++ .../compilers/llvm/4.0/libc++/setup-hook.sh | 3 + .../compilers/llvm/4.0/libc++abi.nix | 45 +++++++ pkgs/development/compilers/llvm/4.0/lld.nix | 32 +++++ pkgs/development/compilers/llvm/4.0/lldb.nix | 47 +++++++ .../compilers/llvm/4.0/llvm-outputs.patch | 26 ++++ pkgs/development/compilers/llvm/4.0/llvm.nix | 116 ++++++++++++++++++ pkgs/top-level/all-packages.nix | 8 ++ 12 files changed, 479 insertions(+) create mode 100644 pkgs/development/compilers/llvm/4.0/clang/default.nix create mode 100644 pkgs/development/compilers/llvm/4.0/clang/purity.patch create mode 100644 pkgs/development/compilers/llvm/4.0/default.nix create mode 100644 pkgs/development/compilers/llvm/4.0/libc++/darwin.patch create mode 100644 pkgs/development/compilers/llvm/4.0/libc++/default.nix create mode 100644 pkgs/development/compilers/llvm/4.0/libc++/setup-hook.sh create mode 100644 pkgs/development/compilers/llvm/4.0/libc++abi.nix create mode 100644 pkgs/development/compilers/llvm/4.0/lld.nix create mode 100644 pkgs/development/compilers/llvm/4.0/lldb.nix create mode 100644 pkgs/development/compilers/llvm/4.0/llvm-outputs.patch create mode 100644 pkgs/development/compilers/llvm/4.0/llvm.nix diff --git a/pkgs/development/compilers/llvm/4.0/clang/default.nix b/pkgs/development/compilers/llvm/4.0/clang/default.nix new file mode 100644 index 00000000000..d482f91cb83 --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/clang/default.nix @@ -0,0 +1,56 @@ +{ stdenv, fetch, cmake, libxml2, libedit, llvm, version, clang-tools-extra_src, python }: + +let + gcc = if stdenv.cc.isGNU then stdenv.cc.cc else stdenv.cc.cc.gcc; + self = stdenv.mkDerivation { + name = "clang-${version}"; + + unpackPhase = '' + unpackFile ${fetch "cfe" "1p55db1yfya60r2fnr9bh8pj8fqq5gjc1fnv0c1kmac8yfvwkmkn"} + mv cfe-${version}* clang + sourceRoot=$PWD/clang + unpackFile ${clang-tools-extra_src} + mv clang-tools-extra-* $sourceRoot/tools/extra + ''; + + buildInputs = [ cmake libedit libxml2 llvm python ]; + + cmakeFlags = [ + "-DCMAKE_CXX_FLAGS=-std=c++11" + ] ++ + # Maybe with compiler-rt this won't be needed? + (stdenv.lib.optional stdenv.isLinux "-DGCC_INSTALL_PREFIX=${gcc}") ++ + (stdenv.lib.optional (stdenv.cc.libc != null) "-DC_INCLUDE_DIRS=${stdenv.cc.libc}/include"); + + patches = [ ./purity.patch ]; + + postPatch = '' + sed -i -e 's/Args.hasArg(options::OPT_nostdlibinc)/true/' lib/Driver/Tools.cpp + sed -i -e 's/DriverArgs.hasArg(options::OPT_nostdlibinc)/true/' lib/Driver/ToolChains.cpp + ''; + + # Clang expects to find LLVMgold in its own prefix + # Clang expects to find sanitizer libraries in its own prefix + postInstall = '' + ln -sv ${llvm}/lib/LLVMgold.so $out/lib + ln -sv ${llvm}/lib/clang/${version}/lib $out/lib/clang/${version}/ + ln -sv $out/bin/clang $out/bin/cpp + ''; + + enableParallelBuilding = true; + + passthru = { + lib = self; # compatibility with gcc, so that `stdenv.cc.cc.lib` works on both + isClang = true; + } // stdenv.lib.optionalAttrs stdenv.isLinux { + inherit gcc; + }; + + meta = { + description = "A c, c++, objective-c, and objective-c++ frontend for the llvm compiler"; + homepage = http://llvm.org/; + license = stdenv.lib.licenses.ncsa; + platforms = stdenv.lib.platforms.all; + }; + }; +in self diff --git a/pkgs/development/compilers/llvm/4.0/clang/purity.patch b/pkgs/development/compilers/llvm/4.0/clang/purity.patch new file mode 100644 index 00000000000..f5fb4c73af4 --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/clang/purity.patch @@ -0,0 +1,16 @@ +--- a/lib/Driver/Tools.cpp 2016-08-25 15:48:05.187553443 +0200 ++++ b/lib/Driver/Tools.cpp 2016-08-25 15:48:47.534468882 +0200 +@@ -9420,13 +9420,6 @@ + if (!Args.hasArg(options::OPT_static)) { + if (Args.hasArg(options::OPT_rdynamic)) + CmdArgs.push_back("-export-dynamic"); +- +- if (!Args.hasArg(options::OPT_shared)) { +- const std::string Loader = +- D.DyldPrefix + ToolChain.getDynamicLinker(Args); +- CmdArgs.push_back("-dynamic-linker"); +- CmdArgs.push_back(Args.MakeArgString(Loader)); +- } + } + + CmdArgs.push_back("-o"); diff --git a/pkgs/development/compilers/llvm/4.0/default.nix b/pkgs/development/compilers/llvm/4.0/default.nix new file mode 100644 index 00000000000..a239825533e --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/default.nix @@ -0,0 +1,51 @@ +{ newScope, stdenv, isl, fetchurl, overrideCC, wrapCC, darwin, ccWrapperFun }: +let + callPackage = newScope (self // { inherit stdenv isl version fetch; }); + + version = "4.0.0"; + rc = "rc2"; + + fetch = fetch_v version; + fetch_v = ver: name: sha256: fetchurl { + url = "http://llvm.org/pre-releases/${version}/${rc}/${name}-${version}${rc}.src.tar.xz"; + # Once 4.0 is released, use this instead: + # url = "http://llvm.org/releases/${version}/${name}-${ver}.src.tar.xz"; + inherit sha256; + }; + + compiler-rt_src = fetch "compiler-rt" "07i098rj41h1sq2f30d6161924zr5yd9gx5kans79p7akxxgc0jr"; + clang-tools-extra_src = fetch "clang-tools-extra" "0ypvkv55pw88iaixib29sgz44d4pfs166vpswnrrbkqlhz92ns0z"; + + self = { + llvm = callPackage ./llvm.nix { + inherit compiler-rt_src stdenv; + }; + + clang-unwrapped = callPackage ./clang { + inherit clang-tools-extra_src stdenv; + }; + + clang = wrapCC self.clang-unwrapped; + + libcxxClang = ccWrapperFun { + cc = self.clang-unwrapped; + isClang = true; + inherit (self) stdenv; + /* FIXME is this right? */ + inherit (stdenv.cc) libc nativeTools nativeLibc; + extraPackages = [ self.libcxx self.libcxxabi ]; + }; + + stdenv = overrideCC stdenv self.clang; + + libcxxStdenv = overrideCC stdenv self.libcxxClang; + + lld = callPackage ./lld.nix {}; + + lldb = callPackage ./lldb.nix {}; + + libcxx = callPackage ./libc++ {}; + + libcxxabi = callPackage ./libc++abi.nix {}; + }; +in self diff --git a/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch b/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch new file mode 100644 index 00000000000..6dd756f01cc --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch @@ -0,0 +1,39 @@ +--- libcxx-3.8.0.src.org/lib/CMakeLists.txt 2015-12-16 15:41:05.000000000 -0800 ++++ libcxx-3.8.0.src/lib/CMakeLists.txt 2016-06-17 19:40:00.293394500 -0700 +@@ -94,30 +94,30 @@ + add_definitions(-D__STRICT_ANSI__) + add_link_flags( + "-compatibility_version 1" + "-current_version 1" +- "-install_name /usr/lib/libc++.1.dylib" +- "-Wl,-reexport_library,/usr/lib/libc++abi.dylib" ++ "-install_name ${LIBCXX_LIBCXXABI_LIB_PATH}/libc++.1.dylib" ++ "-Wl,-reexport_library,${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib" + "-Wl,-unexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++unexp.exp" + "/usr/lib/libSystem.B.dylib") + else() + if ( ${CMAKE_OSX_SYSROOT} ) + list(FIND ${CMAKE_OSX_ARCHITECTURES} "armv7" OSX_HAS_ARMV7) + if (OSX_HAS_ARMV7) + set(OSX_RE_EXPORT_LINE +- "${CMAKE_OSX_SYSROOT}/usr/lib/libc++abi.dylib" ++ "${CMAKE_OSX_SYSROOT}${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib" + "-Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++sjlj-abi.exp") + else() + set(OSX_RE_EXPORT_LINE +- "-Wl,-reexport_library,${CMAKE_OSX_SYSROOT}/usr/lib/libc++abi.dylib") ++ "-Wl,-reexport_library,${CMAKE_OSX_SYSROOT}${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib") + endif() + else() +- set(OSX_RE_EXPORT_LINE "/usr/lib/libc++abi.dylib -Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++abi${LIBCXX_LIBCPPABI_VERSION}.exp") ++ set(OSX_RE_EXPORT_LINE "${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib -Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++abi${LIBCXX_LIBCPPABI_VERSION}.exp") + endif() + + add_link_flags( + "-compatibility_version 1" +- "-install_name /usr/lib/libc++.1.dylib" ++ "-install_name ${LIBCXX_LIBCXXABI_LIB_PATH}/libc++.1.dylib" + "-Wl,-unexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++unexp.exp" + "${OSX_RE_EXPORT_LINE}" + "-Wl,-force_symbols_not_weak_list,${CMAKE_CURRENT_SOURCE_DIR}/notweak.exp" + "-Wl,-force_symbols_weak_list,${CMAKE_CURRENT_SOURCE_DIR}/weak.exp") diff --git a/pkgs/development/compilers/llvm/4.0/libc++/default.nix b/pkgs/development/compilers/llvm/4.0/libc++/default.nix new file mode 100644 index 00000000000..76ca0533323 --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/libc++/default.nix @@ -0,0 +1,40 @@ +{ lib, stdenv, fetch, cmake, llvm, libcxxabi, fixDarwinDylibNames, version }: + +stdenv.mkDerivation rec { + name = "libc++-${version}"; + + src = fetch "libcxx" "130clvfffqml8hbnlvr596nfjk18n6ifxab27xl66nxhq99wccfn"; + + postUnpack = '' + unpackFile ${libcxxabi.src} + export LIBCXXABI_INCLUDE_DIR="$PWD/$(ls -d libcxxabi-${version}*)/include" + ''; + + preConfigure = '' + # Get headers from the cxxabi source so we can see private headers not installed by the cxxabi package + cmakeFlagsArray=($cmakeFlagsArray -DLIBCXX_CXX_ABI_INCLUDE_PATHS="$LIBCXXABI_INCLUDE_DIR") + ''; + + patches = lib.optional stdenv.isDarwin ./darwin.patch; + + buildInputs = [ cmake llvm libcxxabi ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames; + + cmakeFlags = [ + "-DLIBCXX_LIBCXXABI_LIB_PATH=${libcxxabi}/lib" + "-DLIBCXX_LIBCPPABI_VERSION=2" + "-DLIBCXX_CXX_ABI=libcxxabi" + ]; + + enableParallelBuilding = true; + + linkCxxAbi = stdenv.isLinux; + + setupHook = ./setup-hook.sh; + + meta = { + homepage = http://libcxx.llvm.org/; + description = "A new implementation of the C++ standard library, targeting C++11"; + license = with stdenv.lib.licenses; [ ncsa mit ]; + platforms = stdenv.lib.platforms.unix; + }; +} diff --git a/pkgs/development/compilers/llvm/4.0/libc++/setup-hook.sh b/pkgs/development/compilers/llvm/4.0/libc++/setup-hook.sh new file mode 100644 index 00000000000..9022fced6ec --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/libc++/setup-hook.sh @@ -0,0 +1,3 @@ +linkCxxAbi="@linkCxxAbi@" +export NIX_CXXSTDLIB_COMPILE+=" -isystem @out@/include/c++/v1" +export NIX_CXXSTDLIB_LINK=" -stdlib=libc++${linkCxxAbi:+" -lc++abi"}" diff --git a/pkgs/development/compilers/llvm/4.0/libc++abi.nix b/pkgs/development/compilers/llvm/4.0/libc++abi.nix new file mode 100644 index 00000000000..52da7cc1988 --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/libc++abi.nix @@ -0,0 +1,45 @@ +{ stdenv, cmake, fetch, libcxx, libunwind, llvm, version }: + +stdenv.mkDerivation { + name = "libc++abi-${version}"; + + src = fetch "libcxxabi" "09hlqlbxpnqi3449nrk43khp4jgd34xwx406mw6igwl8a673pa85"; + + buildInputs = [ cmake llvm ] ++ stdenv.lib.optional (!stdenv.isDarwin && !stdenv.isFreeBSD) libunwind; + + postUnpack = '' + unpackFile ${libcxx.src} + export cmakeFlags="-DLIBCXXABI_LIBCXX_PATH=$PWD/$(ls -d libcxx-*)" + '' + stdenv.lib.optionalString stdenv.isDarwin '' + export TRIPLE=x86_64-apple-darwin + ''; + + installPhase = if stdenv.isDarwin + then '' + for file in lib/*.dylib; do + # this should be done in CMake, but having trouble figuring out + # the magic combination of necessary CMake variables + # if you fancy a try, take a look at + # http://www.cmake.org/Wiki/CMake_RPATH_handling + install_name_tool -id $out/$file $file + done + make install + install -d 755 $out/include + install -m 644 ../include/*.h $out/include + '' + else '' + install -d -m 755 $out/include $out/lib + install -m 644 lib/libc++abi.so.1.0 $out/lib + install -m 644 ../include/cxxabi.h $out/include + ln -s libc++abi.so.1.0 $out/lib/libc++abi.so + ln -s libc++abi.so.1.0 $out/lib/libc++abi.so.1 + ''; + + meta = { + homepage = http://libcxxabi.llvm.org/; + description = "A new implementation of low level support for a standard C++ library"; + license = with stdenv.lib.licenses; [ ncsa mit ]; + maintainers = with stdenv.lib.maintainers; [ vlstill ]; + platforms = stdenv.lib.platforms.unix; + }; +} diff --git a/pkgs/development/compilers/llvm/4.0/lld.nix b/pkgs/development/compilers/llvm/4.0/lld.nix new file mode 100644 index 00000000000..004230ca81a --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/lld.nix @@ -0,0 +1,32 @@ +{ stdenv +, fetch +, cmake +, zlib +, llvm +, python +, version +}: + +stdenv.mkDerivation { + name = "lld-${version}"; + + src = fetch "lld" "144vmb13800s33xgd18321lrviw21mjx5dphzszjgvizn4a1sf1p"; + + buildInputs = [ cmake llvm ]; + + outputs = [ "out" "dev" ]; + + enableParallelBuilding = true; + + postInstall = '' + moveToOutput include "$dev" + moveToOutput lib "$dev" + ''; + + meta = { + description = "The LLVM Linker"; + homepage = http://lld.llvm.org/; + license = stdenv.lib.licenses.ncsa; + platforms = stdenv.lib.platforms.all; + }; +} diff --git a/pkgs/development/compilers/llvm/4.0/lldb.nix b/pkgs/development/compilers/llvm/4.0/lldb.nix new file mode 100644 index 00000000000..7bca695fafc --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/lldb.nix @@ -0,0 +1,47 @@ +{ stdenv +, fetch +, cmake +, zlib +, ncurses +, swig +, which +, libedit +, llvm +, clang-unwrapped +, python +, version +}: + +stdenv.mkDerivation { + name = "lldb-${version}"; + + src = fetch "lldb" "0g3il7bz1b0xbcm85c6r64vgn8ppxigi1s39s3xzga4pkllf7k07"; + + patchPhase = '' + # Fix up various paths that assume llvm and clang are installed in the same place + sed -i 's,".*ClangConfig.cmake","${clang-unwrapped}/lib/cmake/clang/ClangConfig.cmake",' \ + cmake/modules/LLDBStandalone.cmake + sed -i 's,".*tools/clang/include","${clang-unwrapped}/include",' \ + cmake/modules/LLDBStandalone.cmake + sed -i 's,"$.LLVM_LIBRARY_DIR.",${llvm}/lib ${clang-unwrapped}/lib,' \ + cmake/modules/LLDBStandalone.cmake + ''; + + buildInputs = [ cmake python which swig ncurses zlib libedit llvm ]; + + CXXFLAGS = "-fno-rtti"; + hardeningDisable = [ "format" ]; + + cmakeFlags = [ + "-DLLDB_DISABLE_LIBEDIT=1" + ]; + + enableParallelBuilding = true; + + meta = { + description = "A next-generation high-performance debugger"; + homepage = http://llvm.org/; + license = stdenv.lib.licenses.ncsa; + platforms = stdenv.lib.platforms.all; + }; +} diff --git a/pkgs/development/compilers/llvm/4.0/llvm-outputs.patch b/pkgs/development/compilers/llvm/4.0/llvm-outputs.patch new file mode 100644 index 00000000000..40096fa3497 --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/llvm-outputs.patch @@ -0,0 +1,26 @@ +diff --git a/tools/llvm-config/llvm-config.cpp b/tools/llvm-config/llvm-config.cpp +index 94d426b..37f7794 100644 +--- a/tools/llvm-config/llvm-config.cpp ++++ b/tools/llvm-config/llvm-config.cpp +@@ -333,6 +333,21 @@ int main(int argc, char **argv) { + ActiveIncludeOption = "-I" + ActiveIncludeDir; + } + ++ /// Nix-specific multiple-output handling: override ActiveLibDir if --link-shared ++ if (!IsInDevelopmentTree) { ++ bool WantShared = true; ++ for (int i = 1; i < argc; ++i) { ++ StringRef Arg = argv[i]; ++ if (Arg == "--link-shared") ++ WantShared = true; ++ else if (Arg == "--link-static") ++ WantShared = false; // the last one wins ++ } ++ ++ if (WantShared) ++ ActiveLibDir = std::string("@lib@") + "/lib" + LLVM_LIBDIR_SUFFIX; ++ } ++ + /// We only use `shared library` mode in cases where the static library form + /// of the components provided are not available; note however that this is + /// skipped if we're run from within the build dir. However, once installed, diff --git a/pkgs/development/compilers/llvm/4.0/llvm.nix b/pkgs/development/compilers/llvm/4.0/llvm.nix new file mode 100644 index 00000000000..0139f40791c --- /dev/null +++ b/pkgs/development/compilers/llvm/4.0/llvm.nix @@ -0,0 +1,116 @@ +{ stdenv +, fetch +, fetchpatch +, perl +, groff +, cmake +, python +, libffi +, binutils +, libxml2 +, valgrind +, ncurses +, version +, zlib +, compiler-rt_src +, libcxxabi +, debugVersion ? false +, enableSharedLibraries ? true +, darwin +}: + +let + src = fetch "llvm" "1qfvvblca2aa5shamz66132k30hmpq2mkpfn172xzzlm6znzlmr2"; + shlib = if stdenv.isDarwin then "dylib" else "so"; + + # Used when creating a version-suffixed symlink of libLLVM.dylib + shortVersion = with stdenv.lib; + concatStringsSep "." (take 2 (splitString "." version)); +in stdenv.mkDerivation rec { + name = "llvm-${version}"; + + unpackPhase = '' + unpackFile ${src} + mv llvm-${version}* llvm + sourceRoot=$PWD/llvm + unpackFile ${compiler-rt_src} + mv compiler-rt-* $sourceRoot/projects/compiler-rt + ''; + + outputs = [ "out" ] ++ stdenv.lib.optional enableSharedLibraries "lib"; + + buildInputs = [ perl groff cmake libxml2 python libffi ] + ++ stdenv.lib.optionals stdenv.isDarwin + [ libcxxabi darwin.cctools darwin.apple_sdk.libs.xpc ]; + + propagatedBuildInputs = [ ncurses zlib ]; + + # hacky fix: New LLVM releases require a newer OS X SDK than + # 10.9. This is a temporary measure until nixpkgs darwin support is + # updated. + postPatch = stdenv.lib.optionalString stdenv.isDarwin '' + sed -i 's/os_trace(\(.*\)");$/printf(\1\\n");/g' ./projects/compiler-rt/lib/sanitizer_common/sanitizer_mac.cc + '' + # Patch llvm-config to return correct library path based on --link-{shared,static}. + + stdenv.lib.optionalString (enableSharedLibraries) '' + substitute '${./llvm-outputs.patch}' ./llvm-outputs.patch --subst-var lib + patch -p1 < ./llvm-outputs.patch + ''; + + # hacky fix: created binaries need to be run before installation + preBuild = '' + mkdir -p $out/ + ln -sv $PWD/lib $out + ''; + + cmakeFlags = with stdenv; [ + "-DCMAKE_BUILD_TYPE=${if debugVersion then "Debug" else "Release"}" + "-DLLVM_INSTALL_UTILS=ON" # Needed by rustc + "-DLLVM_BUILD_TESTS=ON" + "-DLLVM_ENABLE_FFI=ON" + "-DLLVM_ENABLE_RTTI=ON" + "-DCOMPILER_RT_INCLUDE_TESTS=OFF" # FIXME: requires clang source code + ] ++ stdenv.lib.optional enableSharedLibraries [ + "-DLLVM_LINK_LLVM_DYLIB=ON" + ] ++ stdenv.lib.optional (!isDarwin) + "-DLLVM_BINUTILS_INCDIR=${binutils.dev}/include" + ++ stdenv.lib.optionals (isDarwin) [ + "-DLLVM_ENABLE_LIBCXX=ON" + "-DCAN_TARGET_i386=false" + "-DCMAKE_LIBTOOL=${darwin.cctools}/bin/libtool" + ]; + + postBuild = '' + rm -fR $out + + paxmark m bin/{lli,llvm-rtdyld} + ''; + + postInstall = "" + + stdenv.lib.optionalString (enableSharedLibraries) '' + moveToOutput "lib/libLLVM-*" "$lib" + moveToOutput "lib/libLLVM.${shlib}" "$lib" + substituteInPlace "$out/lib/cmake/llvm/LLVMExports-release.cmake" \ + --replace "\''${_IMPORT_PREFIX}/lib/libLLVM-" "$lib/lib/libLLVM-" + '' + + stdenv.lib.optionalString (stdenv.isDarwin && enableSharedLibraries) '' + substituteInPlace "$out/lib/cmake/llvm/LLVMExports-release.cmake" \ + --replace "\''${_IMPORT_PREFIX}/lib/libLLVM.dylib" "$lib/lib/libLLVM.dylib" + install_name_tool -id $lib/lib/libLLVM.dylib $lib/lib/libLLVM.dylib + install_name_tool -change @rpath/libLLVM.dylib $lib/lib/libLLVM.dylib $out/bin/llvm-config + ln -s $lib/lib/libLLVM.dylib $lib/lib/libLLVM-${shortVersion}.dylib + ln -s $lib/lib/libLLVM.dylib $lib/lib/libLLVM-${version}.dylib + ''; + + enableParallelBuilding = true; + + passthru.src = src; + + meta = { + description = "Collection of modular and reusable compiler and toolchain technologies"; + homepage = http://llvm.org/; + license = stdenv.lib.licenses.ncsa; + maintainers = with stdenv.lib.maintainers; [ lovek323 raskin viric ]; + platforms = stdenv.lib.platforms.all; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 0bfb6d92a8e..95a19240a0a 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -4730,6 +4730,7 @@ with pkgs; clang = llvmPackages.clang; + clang_40 = llvmPackages_40.clang; clang_39 = llvmPackages_39.clang; clang_38 = llvmPackages_38.clang; clang_37 = llvmPackages_37.clang; @@ -5277,10 +5278,13 @@ with pkgs; lizardfs = callPackage ../tools/filesystems/lizardfs { }; + lld = llvmPackages_40.lld; + lldb = llvmPackages.lldb; llvm = llvmPackages.llvm; + llvm_40 = llvmPackages_40.llvm; llvm_39 = llvmPackages_39.llvm; llvm_38 = llvmPackages_38.llvm; llvm_37 = llvmPackages_37.llvm; @@ -5318,6 +5322,10 @@ with pkgs; inherit (stdenvAdapters) overrideCC; }; + llvmPackages_40 = callPackage ../development/compilers/llvm/4.0 { + inherit (stdenvAdapters) overrideCC; + }; + manticore = callPackage ../development/compilers/manticore { }; mentorToolchains = recurseIntoAttrs ( From 2ebb086df167d7881b82af9585c65d43c440ff86 Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Sat, 18 Feb 2017 17:30:08 -0600 Subject: [PATCH 014/216] llvm-4.0/libc++abi: Remove LLVM build dep to unbreak Darwin evaluation. --- pkgs/development/compilers/llvm/4.0/libc++abi.nix | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/pkgs/development/compilers/llvm/4.0/libc++abi.nix b/pkgs/development/compilers/llvm/4.0/libc++abi.nix index 52da7cc1988..362663ed443 100644 --- a/pkgs/development/compilers/llvm/4.0/libc++abi.nix +++ b/pkgs/development/compilers/llvm/4.0/libc++abi.nix @@ -5,11 +5,12 @@ stdenv.mkDerivation { src = fetch "libcxxabi" "09hlqlbxpnqi3449nrk43khp4jgd34xwx406mw6igwl8a673pa85"; - buildInputs = [ cmake llvm ] ++ stdenv.lib.optional (!stdenv.isDarwin && !stdenv.isFreeBSD) libunwind; + buildInputs = [ cmake ] ++ stdenv.lib.optional (!stdenv.isDarwin && !stdenv.isFreeBSD) libunwind; postUnpack = '' unpackFile ${libcxx.src} - export cmakeFlags="-DLIBCXXABI_LIBCXX_PATH=$PWD/$(ls -d libcxx-*)" + unpackFile ${llvm.src} + export cmakeFlags="-DLLVM_PATH=$PWD/$(ls -d llvm-*) -DLIBCXXABI_LIBCXX_PATH=$PWD/$(ls -d libcxx-*)" '' + stdenv.lib.optionalString stdenv.isDarwin '' export TRIPLE=x86_64-apple-darwin ''; From 753058baef591f68767de08984a463f50ccd8bf2 Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Sun, 19 Feb 2017 13:18:01 -0600 Subject: [PATCH 015/216] libc++-4.0rc2: Use substituteInPlace instead of the Darwin patch. On 3.9 the substituteInPlace is equivalent to the patch, hopefully this is a slightly more robust way to make the same substitution for the 4.0 version. Apply this change unconditionally for consistency across versions, even if the changed strings are unused on other platforms. Discussion: https://github.com/NixOS/nixpkgs/pull/22970#discussion_r101926144 --- .../compilers/llvm/4.0/libc++/darwin.patch | 39 ------------------- .../compilers/llvm/4.0/libc++/default.nix | 4 +- 2 files changed, 3 insertions(+), 40 deletions(-) delete mode 100644 pkgs/development/compilers/llvm/4.0/libc++/darwin.patch diff --git a/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch b/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch deleted file mode 100644 index 6dd756f01cc..00000000000 --- a/pkgs/development/compilers/llvm/4.0/libc++/darwin.patch +++ /dev/null @@ -1,39 +0,0 @@ ---- libcxx-3.8.0.src.org/lib/CMakeLists.txt 2015-12-16 15:41:05.000000000 -0800 -+++ libcxx-3.8.0.src/lib/CMakeLists.txt 2016-06-17 19:40:00.293394500 -0700 -@@ -94,30 +94,30 @@ - add_definitions(-D__STRICT_ANSI__) - add_link_flags( - "-compatibility_version 1" - "-current_version 1" -- "-install_name /usr/lib/libc++.1.dylib" -- "-Wl,-reexport_library,/usr/lib/libc++abi.dylib" -+ "-install_name ${LIBCXX_LIBCXXABI_LIB_PATH}/libc++.1.dylib" -+ "-Wl,-reexport_library,${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib" - "-Wl,-unexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++unexp.exp" - "/usr/lib/libSystem.B.dylib") - else() - if ( ${CMAKE_OSX_SYSROOT} ) - list(FIND ${CMAKE_OSX_ARCHITECTURES} "armv7" OSX_HAS_ARMV7) - if (OSX_HAS_ARMV7) - set(OSX_RE_EXPORT_LINE -- "${CMAKE_OSX_SYSROOT}/usr/lib/libc++abi.dylib" -+ "${CMAKE_OSX_SYSROOT}${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib" - "-Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++sjlj-abi.exp") - else() - set(OSX_RE_EXPORT_LINE -- "-Wl,-reexport_library,${CMAKE_OSX_SYSROOT}/usr/lib/libc++abi.dylib") -+ "-Wl,-reexport_library,${CMAKE_OSX_SYSROOT}${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib") - endif() - else() -- set(OSX_RE_EXPORT_LINE "/usr/lib/libc++abi.dylib -Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++abi${LIBCXX_LIBCPPABI_VERSION}.exp") -+ set(OSX_RE_EXPORT_LINE "${LIBCXX_LIBCXXABI_LIB_PATH}/libc++abi.dylib -Wl,-reexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++abi${LIBCXX_LIBCPPABI_VERSION}.exp") - endif() - - add_link_flags( - "-compatibility_version 1" -- "-install_name /usr/lib/libc++.1.dylib" -+ "-install_name ${LIBCXX_LIBCXXABI_LIB_PATH}/libc++.1.dylib" - "-Wl,-unexported_symbols_list,${CMAKE_CURRENT_SOURCE_DIR}/libc++unexp.exp" - "${OSX_RE_EXPORT_LINE}" - "-Wl,-force_symbols_not_weak_list,${CMAKE_CURRENT_SOURCE_DIR}/notweak.exp" - "-Wl,-force_symbols_weak_list,${CMAKE_CURRENT_SOURCE_DIR}/weak.exp") diff --git a/pkgs/development/compilers/llvm/4.0/libc++/default.nix b/pkgs/development/compilers/llvm/4.0/libc++/default.nix index 76ca0533323..9f950e601b2 100644 --- a/pkgs/development/compilers/llvm/4.0/libc++/default.nix +++ b/pkgs/development/compilers/llvm/4.0/libc++/default.nix @@ -15,7 +15,9 @@ stdenv.mkDerivation rec { cmakeFlagsArray=($cmakeFlagsArray -DLIBCXX_CXX_ABI_INCLUDE_PATHS="$LIBCXXABI_INCLUDE_DIR") ''; - patches = lib.optional stdenv.isDarwin ./darwin.patch; + patchPhase = '' + substituteInPlace lib/CMakeLists.txt --replace "/usr/lib/libc++" "\''${LIBCXX_LIBCXXABI_LIB_PATH}/libc++" + ''; buildInputs = [ cmake llvm libcxxabi ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames; From a5aedafbd9819880aa27c455345cfa7c26a68424 Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Sun, 19 Feb 2017 14:33:47 -0600 Subject: [PATCH 016/216] llvm-4.0: Distinguish release version, fix naming to clarify rc2. --- .../development/compilers/llvm/4.0/clang/default.nix | 4 ++-- pkgs/development/compilers/llvm/4.0/default.nix | 12 ++++++------ pkgs/development/compilers/llvm/4.0/llvm.nix | 5 +++-- 3 files changed, 11 insertions(+), 10 deletions(-) diff --git a/pkgs/development/compilers/llvm/4.0/clang/default.nix b/pkgs/development/compilers/llvm/4.0/clang/default.nix index d482f91cb83..f566cd6d21c 100644 --- a/pkgs/development/compilers/llvm/4.0/clang/default.nix +++ b/pkgs/development/compilers/llvm/4.0/clang/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetch, cmake, libxml2, libedit, llvm, version, clang-tools-extra_src, python }: +{ stdenv, fetch, cmake, libxml2, libedit, llvm, version, release_version, clang-tools-extra_src, python }: let gcc = if stdenv.cc.isGNU then stdenv.cc.cc else stdenv.cc.cc.gcc; @@ -33,7 +33,7 @@ let # Clang expects to find sanitizer libraries in its own prefix postInstall = '' ln -sv ${llvm}/lib/LLVMgold.so $out/lib - ln -sv ${llvm}/lib/clang/${version}/lib $out/lib/clang/${version}/ + ln -sv ${llvm}/lib/clang/${release_version}/lib $out/lib/clang/${release_version}/ ln -sv $out/bin/clang $out/bin/cpp ''; diff --git a/pkgs/development/compilers/llvm/4.0/default.nix b/pkgs/development/compilers/llvm/4.0/default.nix index a239825533e..f407b2cdc9f 100644 --- a/pkgs/development/compilers/llvm/4.0/default.nix +++ b/pkgs/development/compilers/llvm/4.0/default.nix @@ -1,15 +1,15 @@ { newScope, stdenv, isl, fetchurl, overrideCC, wrapCC, darwin, ccWrapperFun }: let - callPackage = newScope (self // { inherit stdenv isl version fetch; }); + callPackage = newScope (self // { inherit stdenv isl release_version version fetch; }); - version = "4.0.0"; + release_version = "4.0.0"; rc = "rc2"; + version = "${release_version}${rc}"; - fetch = fetch_v version; - fetch_v = ver: name: sha256: fetchurl { - url = "http://llvm.org/pre-releases/${version}/${rc}/${name}-${version}${rc}.src.tar.xz"; + fetch = name: sha256: fetchurl { + url = "http://llvm.org/pre-releases/${release_version}/${rc}/${name}-${version}.src.tar.xz"; # Once 4.0 is released, use this instead: - # url = "http://llvm.org/releases/${version}/${name}-${ver}.src.tar.xz"; + # url = "http://llvm.org/releases/${release-version}/${name}-${version}.src.tar.xz"; inherit sha256; }; diff --git a/pkgs/development/compilers/llvm/4.0/llvm.nix b/pkgs/development/compilers/llvm/4.0/llvm.nix index 0139f40791c..d54390e5ee8 100644 --- a/pkgs/development/compilers/llvm/4.0/llvm.nix +++ b/pkgs/development/compilers/llvm/4.0/llvm.nix @@ -11,6 +11,7 @@ , valgrind , ncurses , version +, release_version , zlib , compiler-rt_src , libcxxabi @@ -25,7 +26,7 @@ let # Used when creating a version-suffixed symlink of libLLVM.dylib shortVersion = with stdenv.lib; - concatStringsSep "." (take 2 (splitString "." version)); + concatStringsSep "." (take 2 (splitString "." release_version)); in stdenv.mkDerivation rec { name = "llvm-${version}"; @@ -99,7 +100,7 @@ in stdenv.mkDerivation rec { install_name_tool -id $lib/lib/libLLVM.dylib $lib/lib/libLLVM.dylib install_name_tool -change @rpath/libLLVM.dylib $lib/lib/libLLVM.dylib $out/bin/llvm-config ln -s $lib/lib/libLLVM.dylib $lib/lib/libLLVM-${shortVersion}.dylib - ln -s $lib/lib/libLLVM.dylib $lib/lib/libLLVM-${version}.dylib + ln -s $lib/lib/libLLVM.dylib $lib/lib/libLLVM-${release_version}.dylib ''; enableParallelBuilding = true; From 7ea342708afd4dc4a48064d1b6067b8584d326e8 Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Sun, 19 Feb 2017 12:11:48 -0600 Subject: [PATCH 017/216] lldb-4.0rc2: Try to fix but ultimately disable on Darwin. Currently it's failing due to needing Foundation.h, but LLDB on Nix-Darwin is a bit sketchy anyway due to code-signing requirements. --- pkgs/development/compilers/llvm/4.0/lldb.nix | 13 ++++++++----- 1 file changed, 8 insertions(+), 5 deletions(-) diff --git a/pkgs/development/compilers/llvm/4.0/lldb.nix b/pkgs/development/compilers/llvm/4.0/lldb.nix index 7bca695fafc..f37e6fdfafc 100644 --- a/pkgs/development/compilers/llvm/4.0/lldb.nix +++ b/pkgs/development/compilers/llvm/4.0/lldb.nix @@ -6,10 +6,12 @@ , swig , which , libedit +, libxml2 , llvm , clang-unwrapped , python , version +, darwin }: stdenv.mkDerivation { @@ -27,21 +29,22 @@ stdenv.mkDerivation { cmake/modules/LLDBStandalone.cmake ''; - buildInputs = [ cmake python which swig ncurses zlib libedit llvm ]; + buildInputs = [ cmake python which swig ncurses zlib libedit libxml2 llvm ] + ++ stdenv.lib.optionals stdenv.isDarwin [ darwin.libobjc darwin.apple_sdk.libs.xpc ]; CXXFLAGS = "-fno-rtti"; hardeningDisable = [ "format" ]; cmakeFlags = [ - "-DLLDB_DISABLE_LIBEDIT=1" + "-DLLDB_DISABLE_LIBEDIT=ON" ]; enableParallelBuilding = true; - meta = { + meta = with stdenv.lib; { description = "A next-generation high-performance debugger"; homepage = http://llvm.org/; - license = stdenv.lib.licenses.ncsa; - platforms = stdenv.lib.platforms.all; + license = licenses.ncsa; + platforms = platforms.allBut platforms.darwin; }; } From 4518b02c8b33c35ec0e483afa83777df69b2aa25 Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 20:14:01 +0100 Subject: [PATCH 018/216] simpleeval: init at 0.9.5 --- .../python-modules/simpleeval/default.nix | 16 ++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 18 insertions(+) create mode 100644 pkgs/development/python-modules/simpleeval/default.nix diff --git a/pkgs/development/python-modules/simpleeval/default.nix b/pkgs/development/python-modules/simpleeval/default.nix new file mode 100644 index 00000000000..cd77f66b56e --- /dev/null +++ b/pkgs/development/python-modules/simpleeval/default.nix @@ -0,0 +1,16 @@ +{ lib, fetchurl, buildPythonPackage }: + +buildPythonPackage rec { + name = "simpleeval-${version}"; + version = "0.9.5"; + src = fetchurl { + url = "mirror://pypi/s/simpleeval/${name}.tar.gz"; + sha256 = "0sda13bqg9l4j17iczmfanxbzsg6fm9aw8i3crzsjfxx51rwj1i3"; + }; + meta = { + homepage = "https://github.com/danthedeckie/simpleeval"; + description = "A simple, safe single expression evaluator library"; + maintainers = with lib.maintainers; [ johbo ]; + license = lib.licenses.mit; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 4e429ff4c2a..09e9b1e2334 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -360,6 +360,8 @@ in { rhpl = if !isPy3k then callPackage ../development/python-modules/rhpl {} else throw "rhpl not supported for interpreter ${python.executable}"; + simpleeval = callPackage ../development/python-modules/simpleeval { }; + sip = callPackage ../development/python-modules/sip { }; tables = callPackage ../development/python-modules/tables { From 402a6c6dde53f2997a5c6678c069fdf2c98b643f Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 20:31:51 +0100 Subject: [PATCH 019/216] PyWebDAV: init at 0.9.8 --- .../python-modules/pywebdav/default.nix | 17 +++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 19 insertions(+) create mode 100644 pkgs/development/python-modules/pywebdav/default.nix diff --git a/pkgs/development/python-modules/pywebdav/default.nix b/pkgs/development/python-modules/pywebdav/default.nix new file mode 100644 index 00000000000..27925a619f2 --- /dev/null +++ b/pkgs/development/python-modules/pywebdav/default.nix @@ -0,0 +1,17 @@ +{ lib, fetchurl, buildPythonPackage, isPy3k }: + +buildPythonPackage rec { + name = "PyWebDAV-${version}"; + version = "0.9.8"; + disabled = isPy3k; + src = fetchurl { + url = "mirror://pypi/p/pywebdav/${name}.tar.gz"; + sha256 = "1v10vg79h85milnq8w7yd75qq5z6297ywkn9b2kxajldzwqxn3ji"; + }; + meta = { + homepage = http://code.google.com/p/pywebdav/; + description = "WebDAV library including a standalone server for python"; + maintainers = with lib.maintainers; [ johbo ]; + license = lib.licenses.gpl2Plus; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 09e9b1e2334..99a939c9cce 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -354,6 +354,8 @@ in { }; }; + PyWebDAV = callPackage ../development/python-modules/pywebdav { }; + pyxml = if !isPy3k then callPackage ../development/python-modules/pyxml{ } else throw "pyxml not supported for interpreter ${python.executable}"; relatorio = callPackage ../development/python-modules/relatorio { }; From 96e1fd6a5a81b24e5f932ee1c2b9bcff17242987 Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 20:24:18 +0100 Subject: [PATCH 020/216] python-stdnum: init at 1.5 --- .../python-modules/python-stdnum/default.nix | 18 ++++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 20 insertions(+) create mode 100644 pkgs/development/python-modules/python-stdnum/default.nix diff --git a/pkgs/development/python-modules/python-stdnum/default.nix b/pkgs/development/python-modules/python-stdnum/default.nix new file mode 100644 index 00000000000..fe85b7bb0d3 --- /dev/null +++ b/pkgs/development/python-modules/python-stdnum/default.nix @@ -0,0 +1,18 @@ +{ lib, fetchurl, buildPythonPackage, isPy3k }: + +buildPythonPackage rec { + name = "python-stdnum-${version}"; + version = "1.5"; + # Failing tests and dependency issue on Py3k + disabled = isPy3k; + src = fetchurl { + url = "mirror://pypi/p/python-stdnum/${name}.tar.gz"; + sha256 = "0zkkpjy4gc161dkyxjmingjw48glljlqqrl4fh2k5idf0frkvzhh"; + }; + meta = { + homepage = "http://arthurdejong.org/python-stdnum/"; + description = "Python module to handle standardized numbers and codes"; + maintainers = with lib.maintainers; [ johbo ]; + license = lib.licenses.lgpl2Plus; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 99a939c9cce..57159eedd43 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -334,6 +334,8 @@ in { python-sql = callPackage ../development/python-modules/python-sql { }; + python-stdnum = callPackage ../development/python-modules/python-stdnum { }; + pytimeparse = buildPythonPackage rec { pname = "pytimeparse"; version = "1.1.6"; From c55649ce07848359e97c2ce9ce577b407ff25b8b Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 21:10:05 +0100 Subject: [PATCH 021/216] flake8-debugger: init at 1.4.0 --- .../python-modules/flake8-debugger/default.nix | 18 ++++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 20 insertions(+) create mode 100644 pkgs/development/python-modules/flake8-debugger/default.nix diff --git a/pkgs/development/python-modules/flake8-debugger/default.nix b/pkgs/development/python-modules/flake8-debugger/default.nix new file mode 100644 index 00000000000..b383c5db008 --- /dev/null +++ b/pkgs/development/python-modules/flake8-debugger/default.nix @@ -0,0 +1,18 @@ +{ lib, fetchurl, buildPythonPackage, flake8, nose }: + +buildPythonPackage rec { + name = "flake8-debugger-${version}"; + version = "1.4.0"; + src = fetchurl { + url = "mirror://pypi/f/flake8-debugger/${name}.tar.gz"; + sha256 = "0chjfa6wvnqjnx778qzahhwvjx1j0rc8ax0ipp5bn70gf47lj62r"; + }; + buildInputs = [ nose ]; + propagatedBuildInputs = [ flake8 ]; + meta = { + homepage = https://github.com/jbkahn/flake8-debugger; + description = "ipdb/pdb statement checker plugin for flake8"; + maintainers = with lib.maintainers; [ johbo ]; + license = lib.licenses.mit; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 57159eedd43..1d0e5a52518 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -11337,6 +11337,8 @@ in { }; }; + flake8-debugger = callPackage ../development/python-modules/flake8-debugger { }; + flaky = buildPythonPackage rec { name = "flaky-${version}"; version = "3.1.0"; From 87b9ee7680d1d991749377d4b76e15dfd01a0315 Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 21:16:39 +0100 Subject: [PATCH 022/216] flake8-blind-except: init at 0.1.1 --- .../flake8-blind-except/default.nix | 16 ++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 18 insertions(+) create mode 100644 pkgs/development/python-modules/flake8-blind-except/default.nix diff --git a/pkgs/development/python-modules/flake8-blind-except/default.nix b/pkgs/development/python-modules/flake8-blind-except/default.nix new file mode 100644 index 00000000000..88b4f811e94 --- /dev/null +++ b/pkgs/development/python-modules/flake8-blind-except/default.nix @@ -0,0 +1,16 @@ +{ lib, fetchurl, buildPythonPackage }: + +buildPythonPackage rec { + name = "flake8-blind-except-${version}"; + version = "0.1.1"; + src = fetchurl { + url = "mirror://pypi/f/flake8-blind-except/${name}.tar.gz"; + sha256 = "16g58mkr3fcn2vlfhp3rlahj93qswc7jd5qrqp748mc26dk3b8xc"; + }; + meta = { + homepage = https://github.com/elijahandrews/flake8-blind-except; + description = "A flake8 extension that checks for blind except: statements"; + maintainers = with lib.maintainers; [ johbo ]; + license = lib.licenses.mit; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 1d0e5a52518..f881dea71a2 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -11337,6 +11337,8 @@ in { }; }; + flake8-blind-except = callPackage ../development/python-modules/flake8-blind-except { }; + flake8-debugger = callPackage ../development/python-modules/flake8-debugger { }; flaky = buildPythonPackage rec { From 3134afb814597c4dd25c6a3e5b84a066fd1d2700 Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Mon, 20 Feb 2017 20:59:32 +0100 Subject: [PATCH 023/216] requests_toolbelt: 0.6.2 -> 0.7.1 --- pkgs/top-level/python-packages.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index f881dea71a2..0ed5c5fbe3d 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -22181,12 +22181,12 @@ in { requests_oauthlib = callPackage ../development/python-modules/requests-oauthlib.nix { }; requests_toolbelt = buildPythonPackage rec { - version = "0.6.2"; + version = "0.7.1"; name = "requests-toolbelt-${version}"; src = pkgs.fetchurl { url = "https://github.com/sigmavirus24/requests-toolbelt/archive/${version}.tar.gz"; - sha256 = "0ds1b2qx0nx9bqj1sqgr4lmanb4hpchmylp1hml1l0p71qi5ha0r"; + sha256 = "16grklnbgcfwqj3f39gw7fc9afi7xlp9gm7x8w6mi81dzhdxf50y"; }; propagatedBuildInputs = with self; [ requests2 ]; From ac346f4be6fed9f9a1da4621254c64a7ca06d1e3 Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Tue, 21 Feb 2017 10:52:53 +0100 Subject: [PATCH 024/216] zope_configuration: Skip tests on py3 There is an open problem around namespace packages which prevents a successful test run at the moment. --- pkgs/top-level/python-packages.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 0ed5c5fbe3d..b3fbc26c331 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -27591,6 +27591,10 @@ EOF propagatedBuildInputs = with self; [ zope_i18nmessageid zope_schema ]; + # Trouble with implicit namespace packages on Python3 + # see https://github.com/pypa/setuptools/issues/912 + doCheck = !isPy3k; + meta = { maintainers = with maintainers; [ goibhniu ]; }; From a000ec038e5f3d76e04ed45b79f15f709a052d59 Mon Sep 17 00:00:00 2001 From: Luke Gorrie Date: Wed, 22 Feb 2017 04:48:50 +0000 Subject: [PATCH 025/216] r-modules/README.md: mention generate-shell.nix --- pkgs/development/r-modules/README.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/pkgs/development/r-modules/README.md b/pkgs/development/r-modules/README.md index cb962e138c5..0d9c1490d2b 100644 --- a/pkgs/development/r-modules/README.md +++ b/pkgs/development/r-modules/README.md @@ -87,6 +87,8 @@ this into your user profile. ## Updating the package set ```bash +nix-shell generate-shell.nix + Rscript generate-r-packages.R cran > cran-packages.nix.new mv cran-packages.nix.new cran-packages.nix From edcdd4b7616cf8f03017655fb60ed048d951a462 Mon Sep 17 00:00:00 2001 From: Badi' Abdul-Wahid Date: Wed, 22 Feb 2017 14:47:29 -0500 Subject: [PATCH 026/216] super-user-spark: switch to haskellPackages LTS 8.x GHC 8.0.2 This updates super-user-spark to support the recent change in nixpkgs of the haskellPackages to LTS 8.x using GHC 8.0.2 [1]. It also includes some recent changes to the super-user-spark package, upgraded to commit ab86356 [2]. [1]: https://www.mail-archive.com/nix-dev@lists.science.uu.nl/msg31818.html [2]: https://github.com/NorfairKing/super-user-spark/tree/ab8635682d67842b9e6d909cf3c618014e4157f2 --- .../misc/super_user_spark/default.nix | 31 ++++++++++--------- 1 file changed, 16 insertions(+), 15 deletions(-) diff --git a/pkgs/applications/misc/super_user_spark/default.nix b/pkgs/applications/misc/super_user_spark/default.nix index 1b6167c6196..dd1218282d8 100644 --- a/pkgs/applications/misc/super_user_spark/default.nix +++ b/pkgs/applications/misc/super_user_spark/default.nix @@ -1,27 +1,28 @@ -{ mkDerivation, aeson, aeson-pretty, base, binary, bytestring -, directory, fetchgit, filepath, HTF, HUnit, mtl -, optparse-applicative, parsec, process, shelly, stdenv, text -, transformers, unix, zlib +{ mkDerivation, fetchgit, aeson, aeson-pretty, base, bytestring, directory +, filepath, hspec, hspec-core, HUnit, mtl, optparse-applicative +, parsec, process, pureMD5, QuickCheck, shelly, stdenv, text +, transformers, unix }: mkDerivation { pname = "super-user-spark"; - version = "0.2.0.3"; + version = "0.3.2.0-dev"; src = fetchgit { url = "https://github.com/NorfairKing/super-user-spark"; - sha256 = "1w9c2b1fxqxp2q5jxsvnrfqvyvpk8q70qqsgzshmghx0yylx9cns"; - rev = "a7d132f7631649c3a093ede286e66f78e9793fba"; + sha256 = "0akyc51bghzkk8j75n0i8v8rrsklidwvljhx3aibxfbkqp33372g"; + rev = "ab8635682d67842b9e6d909cf3c618014e4157f2"; }; - isLibrary = false; + isLibrary = true; isExecutable = true; - executableHaskellDepends = [ - aeson aeson-pretty base binary bytestring directory filepath HTF - mtl optparse-applicative parsec process shelly text transformers - unix zlib + libraryHaskellDepends = [ + aeson aeson-pretty base bytestring directory filepath mtl + optparse-applicative parsec process pureMD5 shelly text + transformers unix ]; + executableHaskellDepends = [ base ]; testHaskellDepends = [ - aeson aeson-pretty base binary bytestring directory filepath HTF - HUnit mtl optparse-applicative parsec process shelly text - transformers unix zlib + aeson aeson-pretty base bytestring directory filepath hspec + hspec-core HUnit mtl optparse-applicative parsec process pureMD5 + QuickCheck shelly text transformers unix ]; jailbreak = true; description = "Configure your dotfile deployment with a DSL"; From 45588a7a7c97dba180cf9e189902594c29920e37 Mon Sep 17 00:00:00 2001 From: davidak Date: Sun, 19 Feb 2017 02:18:32 +0100 Subject: [PATCH 027/216] PyZufall: init at 0.13.2 --- .../python-modules/pyzufall/default.nix | 30 +++++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 32 insertions(+) create mode 100644 pkgs/development/python-modules/pyzufall/default.nix diff --git a/pkgs/development/python-modules/pyzufall/default.nix b/pkgs/development/python-modules/pyzufall/default.nix new file mode 100644 index 00000000000..5777a6137ae --- /dev/null +++ b/pkgs/development/python-modules/pyzufall/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchurl, python, buildPythonPackage, nose, future, coverage }: + +buildPythonPackage rec { + pname = "PyZufall"; + version = "0.13.2"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${name}.tar.gz"; + sha256 = "1jffhi20m82fdf78bjhncbdxkfzcskrlipxlrqq9741xdvrn14b5"; + }; + + # disable tests due to problem with nose + # https://github.com/nose-devs/nose/issues/1037 + doCheck = false; + + buildInputs = [ nose coverage ]; + propagatedBuildInputs = [ future ]; + + checkPhase = '' + ${python.interpreter} setup.py nosetests + ''; + + meta = with stdenv.lib; { + homepage = "https://pyzufall.readthedocs.io/de/latest/"; + description = "Library for generating random data and sentences in german language"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ davidak ]; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 6df45b3508f..2ede0b37201 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -360,6 +360,8 @@ in { relatorio = callPackage ../development/python-modules/relatorio { }; + pyzufall = callPackage ../development/python-modules/pyzufall { }; + rhpl = if !isPy3k then callPackage ../development/python-modules/rhpl {} else throw "rhpl not supported for interpreter ${python.executable}"; sip = callPackage ../development/python-modules/sip { }; From 59bb3d1f3f490e5518db269c2b6383a8fe710072 Mon Sep 17 00:00:00 2001 From: Itai Zukerman Date: Wed, 15 Feb 2017 07:40:27 -0800 Subject: [PATCH 028/216] bazel: remove dependence on buildFHSUserEnv --- .../build-managers/bazel/bin_to_env.patch | 207 ++++++++++++++++++ .../tools/build-managers/bazel/default.nix | 94 ++++---- .../bazel/java_stub_template.patch | 16 -- 3 files changed, 252 insertions(+), 65 deletions(-) create mode 100644 pkgs/development/tools/build-managers/bazel/bin_to_env.patch delete mode 100644 pkgs/development/tools/build-managers/bazel/java_stub_template.patch diff --git a/pkgs/development/tools/build-managers/bazel/bin_to_env.patch b/pkgs/development/tools/build-managers/bazel/bin_to_env.patch new file mode 100644 index 00000000000..b65bb681f23 --- /dev/null +++ b/pkgs/development/tools/build-managers/bazel/bin_to_env.patch @@ -0,0 +1,207 @@ +diff -ur a/src/main/java/com/google/devtools/build/lib/analysis/CommandHelper.java b/src/main/java/com/google/devtools/build/lib/analysis/CommandHelper.java +--- a/src/main/java/com/google/devtools/build/lib/analysis/CommandHelper.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/main/java/com/google/devtools/build/lib/analysis/CommandHelper.java 2017-02-19 15:37:06.021759347 -0800 +@@ -242,7 +242,7 @@ + private static Artifact buildCommandLineArtifact(RuleContext ruleContext, String command, + String scriptPostFix) { + String scriptFileName = ruleContext.getTarget().getName() + scriptPostFix; +- String scriptFileContents = "#!/bin/bash\n" + command; ++ String scriptFileContents = "#!/usr/bin/env bash\n" + command; + Artifact scriptFileArtifact = FileWriteAction.createFile( + ruleContext, scriptFileName, scriptFileContents, /*executable=*/true); + return scriptFileArtifact; +diff -ur a/src/main/java/com/google/devtools/build/lib/bazel/rules/BazelConfiguration.java b/src/main/java/com/google/devtools/build/lib/bazel/rules/BazelConfiguration.java +--- a/src/main/java/com/google/devtools/build/lib/bazel/rules/BazelConfiguration.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/main/java/com/google/devtools/build/lib/bazel/rules/BazelConfiguration.java 2017-02-19 15:37:06.022759356 -0800 +@@ -73,7 +73,7 @@ + return new PathFragment("/usr/local/bin/bash"); + } + } +- return new PathFragment("/bin/bash"); ++ return new PathFragment("bash"); + } + + @Override +diff -ur a/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt b/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt +--- a/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt 2017-02-19 15:37:06.022759356 -0800 +@@ -1,4 +1,4 @@ +-#!/bin/bash --posix ++#!/usr/bin/env bash + # Copyright 2014 The Bazel Authors. All rights reserved. + # + # Licensed under the Apache License, Version 2.0 (the "License"); +diff -ur a/src/test/java/com/google/devtools/build/lib/shell/CommandTest.java b/src/test/java/com/google/devtools/build/lib/shell/CommandTest.java +--- a/src/test/java/com/google/devtools/build/lib/shell/CommandTest.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/test/java/com/google/devtools/build/lib/shell/CommandTest.java 2017-02-19 15:37:06.022759356 -0800 +@@ -70,7 +70,7 @@ + } + + try { +- new Command(new String[] {"/bin/true", null}).execute(); ++ new Command(new String[] {"/usr/bin/env", "true", null}).execute(); + fail("Should have thrown NullPointerException"); + } catch (NullPointerException npe) { + // good +@@ -185,7 +185,7 @@ + + @Test + public void testNoStreamingInputForCat() throws Exception { +- final Command command = new Command(new String[]{"/bin/cat"}); ++ final Command command = new Command(new String[]{"/usr/bin/env", "cat"}); + ByteArrayInputStream emptyInput = new ByteArrayInputStream(new byte[0]); + ByteArrayOutputStream out = new ByteArrayOutputStream(); + ByteArrayOutputStream err = new ByteArrayOutputStream(); +@@ -198,7 +198,7 @@ + + @Test + public void testNoInputForCat() throws Exception { +- final Command command = new Command(new String[]{"/bin/cat"}); ++ final Command command = new Command(new String[]{"/usr/bin/env", "cat"}); + CommandResult result = command.execute(); + assertTrue(result.getTerminationStatus().success()); + assertThat(new String(result.getStdout(), "UTF-8")).isEmpty(); +@@ -208,7 +208,7 @@ + @Test + public void testProvidedOutputStreamCapturesHelloWorld() throws Exception { + String helloWorld = "Hello, world."; +- final Command command = new Command(new String[]{"/bin/echo", helloWorld}); ++ final Command command = new Command(new String[]{"/usr/bin/env", "echo", helloWorld}); + ByteArrayOutputStream stdOut = new ByteArrayOutputStream(); + ByteArrayOutputStream stdErr = new ByteArrayOutputStream(); + command.execute(Command.NO_INPUT, Command.NO_OBSERVER, stdOut, stdErr); +@@ -250,7 +250,7 @@ + public void testAsynchronousWithOutputStreams() throws Exception { + + final String helloWorld = "Hello, world."; +- final Command command = new Command(new String[]{"/bin/echo", helloWorld}); ++ final Command command = new Command(new String[]{"/usr/bin/env", "echo", helloWorld}); + final ByteArrayInputStream emptyInput = + new ByteArrayInputStream(new byte[0]); + final ByteArrayOutputStream stdOut = new ByteArrayOutputStream(); +@@ -363,12 +363,12 @@ + for (int exit : new int[] { -1, -2, -3 }) { + int expected = 256 + exit; + try { +- String args[] = { "/bin/bash", "-c", "exit " + exit }; ++ String args[] = { "/usr/bin/env", "bash", "-c", "exit " + exit }; + new Command(args).execute(); + fail("Should have exited with status " + expected); + } catch (BadExitStatusException e) { + assertThat(e).hasMessage("Process exited with status " + expected); +- checkCommandElements(e, "/bin/bash", "-c", "exit " + exit); ++ checkCommandElements(e, "/usr/bin/env", "bash", "-c", "exit " + exit); + TerminationStatus status = e.getResult().getTerminationStatus(); + assertFalse(status.success()); + assertTrue(status.exited()); +@@ -471,7 +471,7 @@ + public void testFlushing() throws Exception { + final Command command = new Command( + // On darwin, /bin/sh does not support -n for the echo builtin. +- new String[] {"/bin/bash", "-c", "echo -n Foo; sleep 0.1; echo Bar"}); ++ new String[] {"/usr/bin/env", "bash", "-c", "echo -n Foo; sleep 0.1; echo Bar"}); + // We run this command, passing in a special output stream + // that records when each flush() occurs. + // We test that a flush occurs after writing "Foo" +@@ -541,13 +541,13 @@ + throw new IOException(); + } + }; +- Command command = new Command(new String[] {"/bin/echo", "foo"}); ++ Command command = new Command(new String[] {"/usr/bin/env", "echo", "foo"}); + try { + command.execute(Command.NO_INPUT, Command.NO_OBSERVER, out, out); + fail(); + } catch (AbnormalTerminationException e) { + // Good. +- checkCommandElements(e, "/bin/echo", "foo"); ++ checkCommandElements(e, "/usr/bin/env", "echo", "foo"); + assertThat(e).hasMessage("java.io.IOException"); + } + } +diff -ur a/src/test/java/com/google/devtools/build/lib/shell/InterruptibleTest.java b/src/test/java/com/google/devtools/build/lib/shell/InterruptibleTest.java +--- a/src/test/java/com/google/devtools/build/lib/shell/InterruptibleTest.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/test/java/com/google/devtools/build/lib/shell/InterruptibleTest.java 2017-02-19 16:17:42.973071187 -0800 +@@ -60,7 +60,7 @@ + + // We interrupt after 1 sec, so this gives us plenty of time for the library to notice the + // subprocess exit. +- this.command = new Command(new String[] { "/bin/sleep", "20" }); ++ this.command = new Command(new String[] { "/usr/bin/env", "sleep", "20" }); + + interrupter.start(); + } +diff -ur a/src/test/java/com/google/devtools/build/lib/shell/LoadTest.java b/src/test/java/com/google/devtools/build/lib/shell/LoadTest.java +--- a/src/test/java/com/google/devtools/build/lib/shell/LoadTest.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/test/java/com/google/devtools/build/lib/shell/LoadTest.java 2017-02-19 15:37:06.022759356 -0800 +@@ -66,7 +66,7 @@ + + @Test + public void testLoad() throws Throwable { +- final Command command = new Command(new String[] {"/bin/cat", ++ final Command command = new Command(new String[] {"/usr/bin/env", "cat", + tempFile.getAbsolutePath()}); + Thread[] threads = new Thread[10]; + List exceptions = Collections.synchronizedList(new ArrayList()); +diff -ur a/src/test/java/com/google/devtools/build/lib/skylark/SkylarkRuleImplementationFunctionsTest.java b/src/test/java/com/google/devtools/build/lib/skylark/SkylarkRuleImplementationFunctionsTest.java +--- a/src/test/java/com/google/devtools/build/lib/skylark/SkylarkRuleImplementationFunctionsTest.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/test/java/com/google/devtools/build/lib/skylark/SkylarkRuleImplementationFunctionsTest.java 2017-02-19 15:37:06.022759356 -0800 +@@ -523,7 +523,7 @@ + @SuppressWarnings("unchecked") + List argv = (List) (List) (MutableList) lookup("argv"); + assertThat(argv).hasSize(3); +- assertMatches("argv[0]", "^.*/bash" + OsUtils.executableExtension() + "$", argv.get(0)); ++ assertMatches("argv[0]", "^(.*/)?bash" + OsUtils.executableExtension() + "$", argv.get(0)); + assertThat(argv.get(1)).isEqualTo("-c"); + assertThat(argv.get(2)).isEqualTo("I got the World on a string"); + } +@@ -558,7 +558,7 @@ + @SuppressWarnings("unchecked") + List argv = (List) (List) (MutableList) lookup("argv"); + assertThat(argv).hasSize(3); +- assertMatches("argv[0]", "^.*/bash" + OsUtils.executableExtension() + "$", argv.get(0)); ++ assertMatches("argv[0]", "^(.*/)?bash" + OsUtils.executableExtension() + "$", argv.get(0)); + assertThat(argv.get(1)).isEqualTo("-c"); + assertMatches("argv[2]", "A.*/mytool .*/mytool.sh B.*file3.dat", argv.get(2)); + } +@@ -588,7 +588,7 @@ + @SuppressWarnings("unchecked") + List argv = (List) (List) (MutableList) lookup("argv"); + assertThat(argv).hasSize(2); +- assertMatches("argv[0]", "^.*/bash" + OsUtils.executableExtension() + "$", argv.get(0)); ++ assertMatches("argv[0]", "^(.*/)?bash" + OsUtils.executableExtension() + "$", argv.get(0)); + assertMatches("argv[1]", "^.*/resolve_me[.]script[.]sh$", argv.get(1)); + } + +diff -ur a/src/test/java/com/google/devtools/build/lib/standalone/StandaloneSpawnStrategyTest.java b/src/test/java/com/google/devtools/build/lib/standalone/StandaloneSpawnStrategyTest.java +--- a/src/test/java/com/google/devtools/build/lib/standalone/StandaloneSpawnStrategyTest.java 1980-01-01 00:00:00.000000000 -0800 ++++ b/src/test/java/com/google/devtools/build/lib/standalone/StandaloneSpawnStrategyTest.java 2017-02-19 16:27:27.851399769 -0800 +@@ -162,16 +162,16 @@ + } + + private static String getFalseCommand() { +- return OS.getCurrent() == OS.DARWIN ? "/usr/bin/false" : "/bin/false"; ++ return OS.getCurrent() == OS.DARWIN ? "/usr/bin/false" : "false"; + } + + private static String getTrueCommand() { +- return OS.getCurrent() == OS.DARWIN ? "/usr/bin/true" : "/bin/true"; ++ return OS.getCurrent() == OS.DARWIN ? "/usr/bin/true" : "true"; + } + + @Test + public void testBinEchoPrintsArguments() throws Exception { +- Spawn spawn = createSpawn("/bin/echo", "Hello,", "world."); ++ Spawn spawn = createSpawn("/usr/bin/env", "echo", "Hello,", "world."); + run(spawn); + assertEquals("Hello, world.\n", out()); + assertThat(err()).isEmpty(); +@@ -179,7 +179,7 @@ + + @Test + public void testCommandRunsInWorkingDir() throws Exception { +- Spawn spawn = createSpawn("/bin/pwd"); ++ Spawn spawn = createSpawn("/usr/bin/env", "pwd"); + run(spawn); + assertEquals(executor.getExecRoot() + "\n", out()); + } diff --git a/pkgs/development/tools/build-managers/bazel/default.nix b/pkgs/development/tools/build-managers/bazel/default.nix index 7b98ce7898a..195041f4b28 100644 --- a/pkgs/development/tools/build-managers/bazel/default.nix +++ b/pkgs/development/tools/build-managers/bazel/default.nix @@ -1,7 +1,6 @@ -{ stdenv, fetchurl, buildFHSUserEnv, writeScript, jdk, zip, unzip, - which, makeWrapper, binutils }: +{ stdenv, fetchurl, jdk, zip, unzip, which, bash, binutils, perl }: -let +stdenv.mkDerivation rec { version = "0.4.4"; @@ -13,60 +12,57 @@ let platforms = platforms.linux; }; - bootstrapEnv = buildFHSUserEnv { - name = "bazel-bootstrap-env"; + name = "bazel-${version}"; - targetPkgs = pkgs: [ ]; - - inherit meta; + src = fetchurl { + url = "https://github.com/bazelbuild/bazel/releases/download/${version}/bazel-${version}-dist.zip"; + sha256 = "1fwfahkqi680zyxmdriqj603lpacyh6cg6ff25bn9bkilbfj2anm"; }; - bazelBinary = stdenv.mkDerivation rec { + sourceRoot = "."; - name = "bazel-${version}"; + patches = [ ./bin_to_env.patch ]; - src = fetchurl { - url = "https://github.com/bazelbuild/bazel/releases/download/${version}/bazel-${version}-dist.zip"; - sha256 = "1fwfahkqi680zyxmdriqj603lpacyh6cg6ff25bn9bkilbfj2anm"; - }; + postPatch = '' + patchShebangs ./compile.sh + for d in scripts src/java_tools src/test src/tools third_party/ijar/test tools; do + patchShebangs $d + done + ''; - sourceRoot = "."; + buildInputs = [ + stdenv.cc + stdenv.cc.cc.lib + bash + jdk + zip + unzip + which + binutils + ]; - patches = [ ./java_stub_template.patch ]; + # If TMPDIR is in the unpack dir we run afoul of blaze's infinite symlink + # detector (see com.google.devtools.build.lib.skyframe.FileFunction). + # Change this to $(mktemp -d) as soon as we figure out why. - packagesNotFromEnv = [ - stdenv.cc stdenv.cc.cc.lib jdk which zip unzip binutils ]; - buildInputs = packagesNotFromEnv ++ [ bootstrapEnv makeWrapper ]; + buildPhase = '' + export TMPDIR=/tmp + ./compile.sh + ''; - buildTimeBinPath = stdenv.lib.makeBinPath packagesNotFromEnv; - buildTimeLibPath = stdenv.lib.makeLibraryPath packagesNotFromEnv; + # Build the CPP and Java examples to verify that Bazel works. + doCheck = true; + checkPhase = '' + export TEST_TMPDIR=$(pwd) + ./output/bazel test examples/cpp:hello-success_test + ./output/bazel test examples/java-native/src/test/java/com/example/myproject:hello + ''; - runTimeBinPath = stdenv.lib.makeBinPath [ jdk stdenv.cc.cc ]; - runTimeLibPath = stdenv.lib.makeLibraryPath [ stdenv.cc.cc.lib ]; + installPhase = '' + mkdir -p $out/bin + mv output/bazel $out/bin + ''; - buildWrapper = writeScript "build-wrapper.sh" '' - #! ${stdenv.shell} -e - export PATH="${buildTimeBinPath}:$PATH" - export LD_LIBRARY_PATH="${buildTimeLibPath}:$LD_LIBRARY_PATH" - ./compile.sh - ''; - - buildPhase = '' - bazel-bootstrap-env ${buildWrapper} - ''; - - installPhase = '' - mkdir -p $out/bin - cp output/bazel $out/bin/ - wrapProgram $out/bin/bazel \ - --suffix PATH ":" "${runTimeBinPath}" \ - --suffix LD_LIBRARY_PATH ":" "${runTimeLibPath}" - ''; - - dontStrip = true; - dontPatchELF = true; - - inherit meta; - }; - -in bazelBinary + dontStrip = true; + dontPatchELF = true; +} diff --git a/pkgs/development/tools/build-managers/bazel/java_stub_template.patch b/pkgs/development/tools/build-managers/bazel/java_stub_template.patch deleted file mode 100644 index 4e456a78d80..00000000000 --- a/pkgs/development/tools/build-managers/bazel/java_stub_template.patch +++ /dev/null @@ -1,16 +0,0 @@ -commit 5525326e3287243e0e7417de96bf7d58d04b4c8b -Author: Irene Knapp -Date: Sat Oct 8 19:36:12 2016 -0700 - - Change #!/bin/bash to #!/usr/bin/env bash. - -diff --git a/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt b/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt -index f77051f..fbf367a 100644 ---- a/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt -+++ b/src/main/java/com/google/devtools/build/lib/bazel/rules/java/java_stub_template.txt -@@ -1,4 +1,4 @@ --#!/bin/bash --posix -+#!/usr/bin/env bash - # Copyright 2014 The Bazel Authors. All rights reserved. - # - # Licensed under the Apache License, Version 2.0 (the "License"); From 2f303bc10e9a499c1f4839a9e0d9c495db804cab Mon Sep 17 00:00:00 2001 From: Will Dietz Date: Thu, 23 Feb 2017 07:46:20 -0600 Subject: [PATCH 029/216] R/generate-shell: Use R from current tree, fix missing wget dep. Without this change, the 'R' version used might be the wrong one which changes the package lists used. Fixes #19530. --- pkgs/development/r-modules/generate-shell.nix | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/pkgs/development/r-modules/generate-shell.nix b/pkgs/development/r-modules/generate-shell.nix index 43c97e009c7..126ab742292 100644 --- a/pkgs/development/r-modules/generate-shell.nix +++ b/pkgs/development/r-modules/generate-shell.nix @@ -1,10 +1,11 @@ -with import {}; +with import ../../.. {}; stdenv.mkDerivation { name = "generate-r-packages-shell"; buildCommand = "exit 1"; + buildInputs = [ wget ]; nativeBuildInputs = [ (rWrapper.override { packages = with rPackages; [ From 4bb87272847c9d8b8ac4397511fd091d2f273fc3 Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Wed, 15 Feb 2017 13:54:55 +1100 Subject: [PATCH 030/216] R: 3.2.4 -> 3.3.2 --- pkgs/applications/science/math/R/default.nix | 12 +- .../science/math/R/zlib-version-check.patch | 20 + .../r-modules/bioc-annotation-packages.nix | 482 +- .../r-modules/bioc-experiment-packages.nix | 552 +- pkgs/development/r-modules/bioc-packages.nix | 2315 ++--- pkgs/development/r-modules/cran-packages.nix | 7689 +++++++++++------ pkgs/development/r-modules/default.nix | 12 - .../r-modules/generate-r-packages.R | 10 +- 8 files changed, 6662 insertions(+), 4430 deletions(-) create mode 100644 pkgs/applications/science/math/R/zlib-version-check.patch diff --git a/pkgs/applications/science/math/R/default.nix b/pkgs/applications/science/math/R/default.nix index dea095c834f..d9bbda9512a 100644 --- a/pkgs/applications/science/math/R/default.nix +++ b/pkgs/applications/science/math/R/default.nix @@ -7,11 +7,11 @@ }: stdenv.mkDerivation rec { - name = "R-3.2.4"; + name = "R-3.3.2"; src = fetchurl { url = "http://cran.r-project.org/src/base/R-3/${name}.tar.gz"; - sha256 = "0l6k3l3cy6fa9xkn23zvz5ykpw10s45779x88yz3pzn2x5gl1zds"; + sha256 = "0k2i9qdd83g09fcpls2198q4ykxkii5skczb514gnx7mx4hsv56j"; }; buildInputs = [ bzip2 gfortran libX11 libXmu libXt @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { ++ stdenv.lib.optionals (!stdenv.isDarwin) [ tcl tk ] ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa Foundation cf-private libobjc ]; - patches = [ ./no-usr-local-search-paths.patch ]; + patches = [ ./no-usr-local-search-paths.patch ./zlib-version-check.patch ]; preConfigure = '' configureFlagsArray=( @@ -35,10 +35,6 @@ stdenv.mkDerivation rec { --with-libpng --with-jpeglib --with-libtiff - --with-system-zlib - --with-system-bzlib - --with-system-pcre - --with-system-xz --with-ICU ${stdenv.lib.optionalString enableStrictBarrier "--enable-strict-barrier"} --enable-R-shlib @@ -69,7 +65,7 @@ stdenv.mkDerivation rec { installTargets = [ "install" "install-info" "install-pdf" ]; - doCheck = true; + doCheck = withRecommendedPackages; enableParallelBuilding = true; diff --git a/pkgs/applications/science/math/R/zlib-version-check.patch b/pkgs/applications/science/math/R/zlib-version-check.patch new file mode 100644 index 00000000000..83cfed2cac4 --- /dev/null +++ b/pkgs/applications/science/math/R/zlib-version-check.patch @@ -0,0 +1,20 @@ +diff --git a/configure b/configure +index cf368ce..dc528ff 100755 +--- a/configure ++++ b/configure +@@ -35507,10 +35507,11 @@ else + #include + #include + int main() { +-#ifdef ZLIB_VERSION +-/* Work around Debian bug: it uses 1.2.3.4 even though there was no such +- version on the master site zlib.net */ +- exit(strncmp(ZLIB_VERSION, "1.2.5", 5) < 0); ++#ifdef ZLIB_VERNUM ++ if (ZLIB_VERNUM < 0x01250) { ++ exit(1); ++ } ++ exit(0); + #else + exit(1); + #endif diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix index 4519953ad5c..25a89d94eba 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.2"; }; +let derive2 = derive { rVersion = "3.3"; }; in with self; { BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; @@ -20,6 +20,7 @@ in with self; { BSgenome_Btaurus_UCSC_bosTau6_masked = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6.masked"; version="1.3.99"; sha256="07isv0lcvlsl0aha1p474l0pps0j7bsh455m33vfxwahivqsfy27"; depends=[BSgenome BSgenome_Btaurus_UCSC_bosTau6]; }; BSgenome_Btaurus_UCSC_bosTau8 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau8"; version="1.4.2"; sha256="16wjy1aw9nvx03r7w8yh5w7sw3pn8i9nczd0n0728l6nnyqxlsz6"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce10 = derive2 { name="BSgenome.Celegans.UCSC.ce10"; version="1.4.0"; sha256="1zaym97jk4npxk14ifvwz2rvhm4zx9xgs33r9vvx9rlynp0gydrk"; depends=[BSgenome]; }; + BSgenome_Celegans_UCSC_ce11 = derive2 { name="BSgenome.Celegans.UCSC.ce11"; version="1.4.2"; sha256="0d4bxfglpqiv1f0n6imdgz101g9383hfj3ra91268wryzlm0yk5w"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce2 = derive2 { name="BSgenome.Celegans.UCSC.ce2"; version="1.4.0"; sha256="1x7nvisz7mjrpqlsiw4an04f8hksygzn96p5ld0388hljg78dax8"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce6 = derive2 { name="BSgenome.Celegans.UCSC.ce6"; version="1.4.0"; sha256="0mqzb353xv2c3m3vkb315dkmnxkgczp7ndnknyhpgjlybyf715v9"; depends=[BSgenome]; }; BSgenome_Cfamiliaris_UCSC_canFam2 = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam2"; version="1.4.0"; sha256="052p2lsm1ny0rjvhgd56w6z4nrqfc74vh0q7cmqz55xkhk01h7hm"; depends=[BSgenome]; }; @@ -45,7 +46,7 @@ in with self; { BSgenome_Ggallus_UCSC_galGal3_masked = derive2 { name="BSgenome.Ggallus.UCSC.galGal3.masked"; version="1.3.99"; sha256="0igi02g46h1j87hv9bk45nbqahyjd0k75jkg0s6m9a62jsssg63l"; depends=[BSgenome BSgenome_Ggallus_UCSC_galGal3]; }; BSgenome_Ggallus_UCSC_galGal4 = derive2 { name="BSgenome.Ggallus.UCSC.galGal4"; version="1.4.0"; sha256="1qfl046akdf43azigprc13sssgbmxdz9dmlrvy13ag8fgfkjxign"; depends=[BSgenome]; }; BSgenome_Ggallus_UCSC_galGal4_masked = derive2 { name="BSgenome.Ggallus.UCSC.galGal4.masked"; version="1.3.99"; sha256="0fvqimjf1xvgka4nw66nd0rbyb7r93v8cyw33776lhfv68ny058v"; depends=[BSgenome BSgenome_Ggallus_UCSC_galGal4]; }; - BSgenome_Hsapiens_1000genomes_hs37d5 = derive2 { name="BSgenome.Hsapiens.1000genomes.hs37d5"; version="0.99.0"; sha256="0fnap8bxjn8xc38ihsbyi60q86cgvlznz9d1dl13q2ydb5bb1ryb"; depends=[BSgenome]; }; + BSgenome_Hsapiens_1000genomes_hs37d5 = derive2 { name="BSgenome.Hsapiens.1000genomes.hs37d5"; version="0.99.1"; sha256="1cg0g5fqmsvwyw2p9hp2yy4ilk21jkbbrnpgqvb5c36ihjwvc7sr"; depends=[BSgenome]; }; BSgenome_Hsapiens_NCBI_GRCh38 = derive2 { name="BSgenome.Hsapiens.NCBI.GRCh38"; version="1.3.1000"; sha256="0y75qdq578fh6420vbvsbwmdw8jvr3g06qli2h3vj3pxmjykh9c1"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg17 = derive2 { name="BSgenome.Hsapiens.UCSC.hg17"; version="1.3.1000"; sha256="1q8p0zp5xpp22znwnygl3jhc159db4q3kkpj5wfij5a6z19zs1w3"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg17_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg17.masked"; version="1.3.99"; sha256="1pg39kmbmnync0xxdbgsn6gpz78hfbzd7iffidpv8mfk734srwzn"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg17]; }; @@ -61,6 +62,7 @@ in with self; { BSgenome_Mmulatta_UCSC_rheMac2_masked = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac2.masked"; version="1.3.99"; sha256="1j4z4iy13n4qbi9a50qw1hn8z14xz0z8hbiwhy2bb9znykkf4chd"; depends=[BSgenome BSgenome_Mmulatta_UCSC_rheMac2]; }; BSgenome_Mmulatta_UCSC_rheMac3 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac3"; version="1.4.0"; sha256="0r3v4p567rxcczwqi7zdz7pmdiffgrq83j488libdb4s0hdg5jmi"; depends=[BSgenome]; }; BSgenome_Mmulatta_UCSC_rheMac3_masked = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac3.masked"; version="1.3.99"; sha256="0k3j40hrys60qdij5rsxdzyx9bfmryaki5p7i4d5m0xmldlk9anr"; depends=[BSgenome BSgenome_Mmulatta_UCSC_rheMac3]; }; + BSgenome_Mmulatta_UCSC_rheMac8 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac8"; version="1.4.2"; sha256="18z6vl89jkjzvppz3r93b2s32l17hz6pfp36wv5wvhm0c0rhnhmw"; depends=[BSgenome]; }; BSgenome_Mmusculus_UCSC_mm10 = derive2 { name="BSgenome.Mmusculus.UCSC.mm10"; version="1.4.0"; sha256="12s0nm2na9brjad4rn9l7d3db2aj8qa1xvz0y1k7gk08wayb6bkf"; depends=[BSgenome]; }; BSgenome_Mmusculus_UCSC_mm10_masked = derive2 { name="BSgenome.Mmusculus.UCSC.mm10.masked"; version="1.3.99"; sha256="12d7fkzh0b39b8f6qbgx07x5bmab91is4y846lp4zpbm3iya01g9"; depends=[BSgenome BSgenome_Mmusculus_UCSC_mm10]; }; BSgenome_Mmusculus_UCSC_mm8 = derive2 { name="BSgenome.Mmusculus.UCSC.mm8"; version="1.4.0"; sha256="1al34aa11d6kr0cr4xrabix1xmqc96zzgik5p4yc8r0rba3n100a"; depends=[BSgenome]; }; @@ -88,7 +90,8 @@ in with self; { BSgenome_Tguttata_UCSC_taeGut2 = derive2 { name="BSgenome.Tguttata.UCSC.taeGut2"; version="1.4.2"; sha256="1ikbd5q77l2zmbmbm511s41h00627zi0gq31cm4qr3k1cvlz8617"; depends=[BSgenome]; }; BSgenome_Vvinifera_URGI_IGGP12Xv0 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv0"; version="0.1"; sha256="1m8mqkiqs7291hccb8pfyf2yxpky45qr6j3d9wkvp9x3ra3h0yxf"; depends=[BSgenome]; }; BSgenome_Vvinifera_URGI_IGGP12Xv2 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv2"; version="0.1"; sha256="1saavsi75gw33jphhm3qb5psyfrv850ss4cmqr4i7aw1kc0fvs1j"; depends=[BSgenome]; }; - ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="0.99.3"; sha256="0m060izffk98p3jyv2k534nmz1labr69z9f8ns59pkwkwvjr00f8"; depends=[BiocGenerics ChemmineR RSQLite]; }; + BSgenome_Vvinifera_URGI_IGGP8X = derive2 { name="BSgenome.Vvinifera.URGI.IGGP8X"; version="0.1"; sha256="0v0hi2pbbi5ynd92bvbv4bzr7bgv48kvyz62hdv7k9gh7s5pg0id"; depends=[BSgenome]; }; + ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.0"; sha256="0h4jxcb6vkf9ijljas7yvcx6vmrd5rpjgj202cf2jb9hx8h9497i"; depends=[BiocGenerics ChemmineR RSQLite]; }; DO_db = derive2 { name="DO.db"; version="2.9"; sha256="10bqqa124l61ivzy4mdd3z3ar9a6537qbxw23pc4y9w8a6dwnavn"; depends=[AnnotationDbi]; }; EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="0.99.12"; sha256="1yc912m6qvrqbmc9y4bxyr1l3vfq4pv751jagsqpvjlhgkdasn2p"; depends=[ensembldb GenomicFeatures]; }; EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="0.99.12"; sha256="1r09wksknhsa42aq2xdwnyd0agsw46fnxijb5nkx1avhp82zlpp2"; depends=[ensembldb GenomicFeatures]; }; @@ -102,137 +105,144 @@ in with self; { FDb_UCSC_snp135common_hg19 = derive2 { name="FDb.UCSC.snp135common.hg19"; version="1.0.0"; sha256="1ykyixrbw86ajx65w1jwr068ma5cvzl4kypaw77kpggmf1qqgkxp"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; + FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="0.99.1"; sha256="0sfnrcg5f99d65grlc7ds9i03yrgn8c0p87sp7cqnmr6f2h3y7i4"; depends=[minfi]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.2.2"; sha256="00gariag9ampz82dh0xllrc26r85d7vdcwc0vca5zdy147rwxr7f"; depends=[AnnotationDbi]; }; + GO_db = derive2 { name="GO.db"; version="3.3.0"; sha256="0x2hkbhg9d8waw32hdn05887vv3zbs5aqff3mf5vfyzvl7xhgxy0"; depends=[AnnotationDbi]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.2"; sha256="08m39vdmb0d93wlsianfnc284z0594szbjf68idazjnki7iy6mg4"; depends=[AnnotationDbi org_Hs_eg_db]; }; - HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.2"; sha256="1hmnnjzh13jxvsbf7kzc01kzf527qpywr20q9j2smpljqva34jgj"; depends=[AnnotationDbi org_Hs_eg_db]; }; + Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; + HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; }; Hspec = derive2 { name="Hspec"; version="0.99.1"; sha256="18paxil1976g7c7zyh02wxqj55ndbnshl27z0jhlzc2dwzagx7mb"; depends=[AnnotationDbi]; }; HuExExonProbesetLocation = derive2 { name="HuExExonProbesetLocation"; version="1.15.0"; sha256="0rpn9wh97gh9h795krfqnydxnliqnwgvp33xwqa4g8px3c34nmw1"; depends=[AnnotationDbi]; }; HuExExonProbesetLocationHg18 = derive2 { name="HuExExonProbesetLocationHg18"; version="0.0.2"; sha256="14lbmcb0166rgv25d24g7kng5nvddynvmszfk5mq1yl1spbh7j9g"; depends=[AnnotationDbi]; }; HuExExonProbesetLocationHg19 = derive2 { name="HuExExonProbesetLocationHg19"; version="0.0.3"; sha256="0h240v2wc2c935bxws6xpha4c0hw89bm821w1c1digwhd04kbyxh"; depends=[AnnotationDbi]; }; - HuO22_db = derive2 { name="HuO22.db"; version="3.2.2"; sha256="06vk5i3l3204gznafkrfxxgbm448bxnigjwfk3z3pz7a4097nf2p"; depends=[AnnotationDbi org_Hs_eg_db]; }; + HuO22_db = derive2 { name="HuO22.db"; version="3.2.3"; sha256="159ml83s9r8kcb0phh2zalcmzacn6d5z7vq6bg5ygy9l85vkcqsf"; depends=[AnnotationDbi org_Hs_eg_db]; }; IlluminaHumanMethylation27k_db = derive2 { name="IlluminaHumanMethylation27k.db"; version="1.4.8"; sha256="0zw0n4a9v42ifmvw2hfzzvl8jz1d7f00ia59ljhcvvw9aj12q4zs"; depends=[AnnotationDbi org_Hs_eg_db]; }; IlluminaHumanMethylation27kmanifest = derive2 { name="IlluminaHumanMethylation27kmanifest"; version="0.4.0"; sha256="1kvz6z7g61zdrc1i93wsk1zv5mwcswfkxkl114644q09djwbz1fx"; depends=[minfi]; }; IlluminaHumanMethylation450k_db = derive2 { name="IlluminaHumanMethylation450k.db"; version="2.0.9"; sha256="1zmm65qnm95w9c8z30c9vncca451npbhhnlkpkpp894svsakxziz"; depends=[AnnotationDbi org_Hs_eg_db]; }; IlluminaHumanMethylation450kanno_ilmn12_hg19 = derive2 { name="IlluminaHumanMethylation450kanno.ilmn12.hg19"; version="0.2.1"; sha256="1agvivsji3ppd9qwmf99kzyg5jrz1wnz3f0w07715xywc6pavvxl"; depends=[minfi]; }; IlluminaHumanMethylation450kmanifest = derive2 { name="IlluminaHumanMethylation450kmanifest"; version="0.4.0"; sha256="0qx75xwifrbkqmbkd8dhf44c34ibmbivqh7y8rvgrsizmi5ybcj1"; depends=[minfi]; }; IlluminaHumanMethylation450kprobe = derive2 { name="IlluminaHumanMethylation450kprobe"; version="2.0.6"; sha256="1iah0rw7d8qvgwvn6n2l4cln39ky010gqpd9shml45m48m6whiia"; depends=[AnnotationDbi]; }; - JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.2"; sha256="08fvzg8zs0yyxqnjxbgqxfgphgyfm2yr21g1s414lkjixv16s6hd"; depends=[AnnotationDbi org_Hs_eg_db]; }; - KEGG_db = derive2 { name="KEGG.db"; version="3.2.2"; sha256="074dn5fy8b8p6mwb2l058sn9a3vy2j8isc5fv9vnmn0p9h0aqhi4"; depends=[AnnotationDbi]; }; - LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.2"; sha256="1pqgdgzqjfw96n8d8fwql6jg6gp407xca29jwmcyv4g59v1bx81d"; depends=[AnnotationDbi org_Hs_eg_db]; }; + IlluminaHumanMethylationEPICanno_ilm10b2_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b2.hg19"; version="0.3.0"; sha256="1nz15bva44pag3c4l1z7d01r0jfgb9cirn3zard5i258v1ahg4q6"; depends=[minfi]; }; + IlluminaHumanMethylationEPICmanifest = derive2 { name="IlluminaHumanMethylationEPICmanifest"; version="0.3.0"; sha256="0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"; depends=[minfi]; }; + JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; + KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; }; + LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; - MafDb_ALL_wgs_phase1_release_v3_20101123 = derive2 { name="MafDb.ALL.wgs.phase1.release.v3.20101123"; version="3.2.0"; sha256="1zd2hpp9f4ilajsx6xpimgiqzkxhc3lyhanr4n4gv0d3cdkxa1mb"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MafDb_ALL_wgs_phase3_release_v5a_20130502 = derive2 { name="MafDb.ALL.wgs.phase3.release.v5a.20130502"; version="3.2.0"; sha256="06bdbrjqh0gc7sypp94v0bwq4cfbz8vnq6z3g36w8906ziss6a8j"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MafDb_ALL_wgs_phase3_release_v5b_20130502 = derive2 { name="MafDb.ALL.wgs.phase3.release.v5b.20130502"; version="3.2.0"; sha256="1cc2aphc98nip100jfxy39clknrnpn5z838f1b8fb542whypikn7"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MafDb_ESP6500SI_V2_SSA137 = derive2 { name="MafDb.ESP6500SI.V2.SSA137"; version="3.2.0"; sha256="1dykp9bz1srb144yimkyagfhigr5dzg8ybxa5fsn3sr99p31va69"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MafDb_ExAC_r0_3_sites = derive2 { name="MafDb.ExAC.r0.3.sites"; version="3.2.0"; sha256="1qb3zwlkqaw2p5faajjahpp6g8wp02gd733kw9kim9xddjvjba14"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.5.0"; sha256="07mcj2lrrgnazzk4kgnzriyrny6mv1n0bpyi2s4vkv58xxm2n04k"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.5.0"; sha256="0jp07lnlxmb05cs0j3zr4spnlnqbh846j08ic7nhcl1bgzh652dp"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.5.0"; sha256="0rf2sr7sv2vpszi5wssznx25crx1ad4nbjj3w9whvhn2bzprksw3"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.5.0"; sha256="0ggh4r8vrah8ln14hhvn3rxcv8xxjv8g72pw4l6rrxcwqbicy2pq"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.5.0"; sha256="1x6rap57yzshli4vx4ljv3n8pmrd4xy3lblcpl4nd3319hnl9nfy"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.5.0"; sha256="0iz8aq9sxy485csm3fib3p5mvsnv81kq5d6a1jsnqqhh629c6pf3"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.5.0"; sha256="0dqnnmm668ahychvksbfsk21v7p51ac3qz8n9nff608z8nrry67p"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.5.0"; sha256="0qka863lgsbyv4xny6h1d9xjgckyvbzw4hrd59ykk5j6bjar3zvq"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.5.0"; sha256="0wbrqgxqzvv7s1ak4axkh5x7wl0wlgl9zds2xm1675w5li40j6dv"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.5.0"; sha256="0va8mqhxq7r02bjyi2pyr0y4zhl6jn8lq8367qbzs4bfbj7y2w44"; depends=[MeSHDbi]; }; - MeSH_Bsu_TUB10_eg_db = derive2 { name="MeSH.Bsu.TUB10.eg.db"; version="1.5.0"; sha256="1igsl86sgwmxwy4j1igp5a355rff4jm9pia1hv59s9c6nni5xdfc"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.5.0"; sha256="1v8vmyhdw625s9gl6wfrfbq653mxjhsxayjgm0m9m0h3rkw6nadw"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.5.0"; sha256="03lxs5hkbfqw6wdgdsdspblj6a7pwyqny8ypw72rl6gs0m1jha25"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.5.0"; sha256="1jfn1qdx7dzqi5hwgcz02g5sc0wnqmgc1rm0n3d6mapzz286jl3q"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.5.0"; sha256="171243fbgalpa5fjfqprj8gvg04wrcn1x8l465mzw8jj4y58pc60"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.5.0"; sha256="1gcnrynfnjapwdk13xk2x5g2jphk16ycp04qhwxp2qn53pgrj15k"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.5.0"; sha256="0fdfslzh69rln2yj8hvb0igg3hmvn58pmkzfg0wpr3cc2y51jjvq"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.5.0"; sha256="0m1z665crgj2q00bcz9m9gb0i55fca19agfpdd1b3nyiqil5fwqs"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.5.0"; sha256="1xxlvi78mwjgqigrbxg0zas39i6j9c8ih6yh2s1xvmfm9mdg8v0j"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.5.0"; sha256="0s8w895f3l43v68s5wipggk4lq31cxsvlz7p6rfplj3chqkb4z2c"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.5.0"; sha256="0ra8hqg6w6w8w5wib4qa3py6bk961v47bmr47c9f5zbmp2n4ghwn"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.5.0"; sha256="0y1hcpbf3ddby76i19x933l4hz92a6v03k1cpyqipf1x8gdlkm1z"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.5.0"; sha256="1dlnxpp0ad5n0k43sy3jaz8ak9qxrmy57zg5bsxp65c04fgr3j9j"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.5.0"; sha256="0zllh66mbh20z402wv31993g06q4ap41f5fc7karkf17fbxz7nsl"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.5.0"; sha256="1lhqac659i3hys4r90r5y9k5m48r6ai2f3kir5v2046b8y5gbdx9"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.5.0"; sha256="03fq4zj3d8ag5k05g9jvfll99dir9cnl04lkaw9n3h0q28hrsjg2"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.5.0"; sha256="0zh1awvf8v4axzqhazf8rqb8srp8sas3raiackw2z1niq89l0jw9"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.5.0"; sha256="0myhby94b2i2sp4fzm5wa7j102admbp3lkdzyjwwbq6sw7hznb47"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.5.0"; sha256="1bxrfqh2pwkxdqs9vzvcwh5k1whik45bsmnbkr5c9yaryz8g801y"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.5.0"; sha256="0qp2zqm2z998sx3gzkam0h5f38bblkvwb0jsvxckdr1n7j0ld3bz"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.5.0"; sha256="0l675bqgmk455jx2iwzc3rn3v3a125grc0w6g1j25agbar8fznln"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.5.0"; sha256="190rfd5y5rrjphsc0dhnsms4bx2dkzs8m2ljv5rj1ygwhx78smz6"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.5.0"; sha256="1ci0s1hklzaxc5h0wbfx21llqawi5n9bl0fddpiwwqma8mpy07k5"; depends=[MeSHDbi]; }; + LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; + MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.3.0"; sha256="0axbmmcqsy8hbxxn0q3q14whdjy8zvmd0xbqdlcb08nhs8j1jji0"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; + MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.3.0"; sha256="1g1hi6fvz87im8xafk2jmkms463i2jakjjq8xdmb4zhk1ij6ck2f"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; + MafDb_ALL_wgs_phase1_release_v3_20101123 = derive2 { name="MafDb.ALL.wgs.phase1.release.v3.20101123"; version="3.3.0"; sha256="1aj9w8kaymm9jmjani1nyw75akxprvm77rjddmrlkfdpfj4mnadn"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; + MafDb_ALL_wgs_phase3_release_v5b_20130502 = derive2 { name="MafDb.ALL.wgs.phase3.release.v5b.20130502"; version="3.3.0"; sha256="0rjsj5423nksnk3dn8zyxa7j62ihni1ni9m7hr0fqcm4jixqbjmp"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; + MafDb_ESP6500SI_V2_SSA137 = derive2 { name="MafDb.ESP6500SI.V2.SSA137"; version="3.3.0"; sha256="1yicrqh40pjgg4g7dm7xf26dz3hwp01n25k3m46ds7dyg20g6vln"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite VariantAnnotation VariantFiltering]; }; + MafDb_ExAC_r0_3_1_nonTCGA_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5"; version="3.3.0"; sha256="01l4ixcgpwi8prj91xag2r93dayprg6zi2w2pp0bhsw3cs8v9cfi"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; + MafDb_ExAC_r0_3_1_snvs_hs37d5 = derive2 { name="MafDb.ExAC.r0.3.1.snvs.hs37d5"; version="3.3.0"; sha256="0csnsa6s08yc1mgi32h7pbmdn4h9wja96l2zdfvfwapmh3wmzm1a"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; + MafDb_ExAC_r0_3_sites = derive2 { name="MafDb.ExAC.r0.3.sites"; version="3.3.0"; sha256="07a859ipwbk1il6fvb7mlpvc05r7gkglchx2qlc3xlpl8i9fb9qr"; depends=[AnnotationDbi Biobase Biostrings GenomicRanges IRanges Rsamtools RSQLite SummarizedExperiment VariantAnnotation VariantFiltering]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.6.0"; sha256="0zia94rqj9kjf9cibppkhdb7qx086hkx6hd3dcn85x27di4ic12g"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.6.0"; sha256="1lq2a7l855xb482x97p4mwvgzbizjb6m0avswhm9snvipbkfb42q"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.6.0"; sha256="19nv4mpx15qgiixcvwlbq8v5plzpkzkikgpc5mp9mzf286nnh7vz"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.6.0"; sha256="05xfrgyvyljh9jh38f8fj4x2l0i7h55yn08gd0r4riiibsgrfwvz"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.6.0"; sha256="1fnz04qz5f8v20sr0zp9wd2dbqapww0lfb1c8lv099m5sanmwz35"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.6.0"; sha256="0jbsz97wrbj70pypj9xgvhwy4cgjapirnhsdiix6b1l0lpqahvzq"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.6.0"; sha256="13gdrcn4xmndly7ag15b7qnwl86aclqgi63fn682y12hdbd0r4d9"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.6.0"; sha256="1k7faw7vspx5fg5qqnlq29r7i5b01fv2zhin2b3r497g25pg2yqf"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.6.0"; sha256="1fs858m8hsipawrjm75nqsrcmkka5ynqxk0cw2vr8g7q9a3ash9s"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.6.0"; sha256="1pwg5p82jsqmjl0rf3vv6nk9f4k2l5smn2ksx4d1q8dbnrl6dxdi"; depends=[MeSHDbi]; }; + MeSH_Bsu_TUB10_eg_db = derive2 { name="MeSH.Bsu.TUB10.eg.db"; version="1.6.0"; sha256="1s3i1g5smbcal6sfdraqaybi6cmw3aagjr90dbgbw0dzf1i3vjf5"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.6.0"; sha256="198l8ksvfnzz8cdzx0k6297zvms7m4a6v54c1j96p1brqyx3asc7"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.6.0"; sha256="1lcsfax1w6jpyj6k33l4l4iw7n87gm88pljamn584622i7xgz65q"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.6.0"; sha256="1m1wf195nipvy4ha3amdl1l8shya7308s087ixy8sgklzdfnrka7"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.6.0"; sha256="1192anip5ib95cai84q0lxcj4q9j05m7p91zxnyqgwy8hda13fc4"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.6.0"; sha256="1qis2wxmilv2yy6gi5318md57ybcl1jwd1ap2y6qpa8aa92jdmpn"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.6.0"; sha256="1gs2dvrpdkis46m72sw7rxj5x3wsbyvxyn81npw6af4zvsp1150n"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.6.0"; sha256="13zsdh0x572p06drb6jhmmr2flcsmdwndhpb844rwc9ycw5fxka5"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.6.0"; sha256="0321fb35vmajhpp5fj8g0ha28psbbbk81076zvpx84kf4pbmy4z7"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.6.0"; sha256="1k225nkxnlkrcjg44xb7f7f9h52hjy6b54zfmphkp8r06hqmmynz"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.6.0"; sha256="0z67vcgk9mbjfab5hwd8n2dga02v01b62h51wbajanf5zv8yclb3"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.6.0"; sha256="1xncfml5h36g5ldgvmrvdq1w3mb9b2d3zsw4935ybydw0239pm8f"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.6.0"; sha256="0alw1az6iwk7xlbji5ibd22kp2hkj4s7cgssvkp7m880bbimfw49"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.6.0"; sha256="02dhsprjfg1lb5kiwmflxsd6sdapkp5j9d42c59mgq5i8wp5fgxb"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.6.0"; sha256="036n8rkn51fg1a5n4drx9gxqc6px895f7iqblbkjfyxxg4ljgxvq"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.6.0"; sha256="14v6nm8ky41aq9vih24nyb2yvzx4g14zazc6f2g7ik8g027nvwdl"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.6.0"; sha256="0zr4i89rk4jz20yrh8ag8mb5kdhcf4psb1pplr62idj1h38yn645"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.6.0"; sha256="0yigpsc3j8d0fp390qyxlfm0lgqbbz0q0661nkpchqajfdd1hy7k"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.6.0"; sha256="1rgc176cgd1ciwkiwma6q8vj53fa1an2k7ivqsxiwx8dpiznwp3z"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.6.0"; sha256="12hznsnlpbgmwabli009vr57cqnk5w35r31zsvjfcs0qkmk87dq7"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.6.0"; sha256="0khbqcxj2hvmiknb1ycryv91i2iw028lhhzfwma18spwmqybn8s0"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.6.0"; sha256="0v5pkbzjyrvx8say1nx0aqak8hqpwl4g9hr57nnvbmj6akjqfg5f"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.6.0"; sha256="0dfm8cdl5s83iia8jn4830vxc7lh9l8yf25pd4851zwdz4m34gj7"; depends=[MeSHDbi]; }; MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.4.0"; sha256="1r9q1vk8p9ah28k6gc2dlglwyi1i0y5zaxmzcrkxyw04pfzn41f7"; depends=[MeSHDbi]; }; MeSH_Eco_CFT073_eg_db = derive2 { name="MeSH.Eco.CFT073.eg.db"; version="1.4.0"; sha256="0r7hlxd5k9n9shq3wj5ldqj00apvx4bv8h38v2i4adv29s5x7973"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.5.0"; sha256="0qaciqrisxq7nhib661ha3ixwl2gpc3040dxiw7n4hy87bxa17g4"; depends=[MeSHDbi]; }; + MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.6.0"; sha256="0wgc2c0ihn3qg2sbh3xs2x54igsf4w1pl71c9vcpx65n71xnzwwg"; depends=[MeSHDbi]; }; MeSH_Eco_HS_eg_db = derive2 { name="MeSH.Eco.HS.eg.db"; version="1.4.0"; sha256="0gyrfjyp3k5jbcg92qzz4fjpmk9m4i0v7q2yvja73sni6976g9ca"; depends=[MeSHDbi]; }; MeSH_Eco_IAI1_eg_db = derive2 { name="MeSH.Eco.IAI1.eg.db"; version="1.4.0"; sha256="16mxh182ij25qgfk14dzzpvaac7fqcnzx58j5m6hfrz3wvgh9jrq"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.5.0"; sha256="0cgyb709k0894m5f8gzsfx0215mf058dwmpi41rm4xbv98ww9x2p"; depends=[MeSHDbi]; }; + MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.6.0"; sha256="18m2grrbjp73ymb25iv3krb495b7y0rqy7bgq3ramig119hxcmqp"; depends=[MeSHDbi]; }; MeSH_Eco_K12_DH10B_eg_db = derive2 { name="MeSH.Eco.K12.DH10B.eg.db"; version="1.4.0"; sha256="00y5qlqrsjl941iaqln4m5jvskc2a6kildys881ml92f14cmgs07"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.5.0"; sha256="1az1si0pkd9jngddvd5b37k0h5y5p2mkis9z1y6w9g3kp2z5b3wy"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.6.0"; sha256="1778f3bcll6zd4jing0nm8iydsyhbx68d78wh1dj68x9gky1rwd2"; depends=[MeSHDbi]; }; MeSH_Eco_O127_H6_E2348_69_eg_db = derive2 { name="MeSH.Eco.O127.H6.E2348.69.eg.db"; version="1.4.0"; sha256="1as23bz0yylgf24sy84xm46bblvkacp84kjr2g8c9if1vll2x2dg"; depends=[MeSHDbi]; }; MeSH_Eco_O157_H7_EDL933_eg_db = derive2 { name="MeSH.Eco.O157.H7.EDL933.eg.db"; version="1.4.0"; sha256="0qnnp2a2v3nv1br1lg2km0p96q1knwa1fx95cg4wp38nc5g0jcc9"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.5.0"; sha256="12x6fp6h45ixxisib2x16rvx5xv57xfh9pcrwpprrj8sy2pv2gbb"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.6.0"; sha256="01lbrqjdyf8awzhypqmm5wja1ql08i4f8a6c9w5h9g4sziq24ck5"; depends=[MeSHDbi]; }; MeSH_Eco_S88_eg_db = derive2 { name="MeSH.Eco.S88.eg.db"; version="1.4.0"; sha256="15k44ricv7vi7sbw5s2nckm6jwbfzrrjp8ck06ydjp9q70hfzmhy"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.5.0"; sha256="1a6f5xz5zc609k27fivaav5dg9kmz9wyrmjm4cz194ac36zj57q7"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.5.0"; sha256="02lp2sdgbz8a50l0s8mfw7halgdg2sc00sxc6k2dr7his3clhnby"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.5.0"; sha256="1i8vlkis021cw5ym0f74rgpcml8x8wcsjvaynpadpvfkyra49946"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.5.0"; sha256="1awwmbmrgi5jpsa6xys4aqd8c4vjcfy0d1fbs918v8dha9ksy202"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.5.0"; sha256="13cpchm3lyc259r739k1kcljmjpr31l7wp9zgiliyqc1l7hw279k"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.5.0"; sha256="09sbzwqh1bi0bbdxbin107nbqw9vch09vsr2d2pq3z5q3bdz52sh"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.5.0"; sha256="0f71ywvjsc2ly8l7lrxm6nrkrnm2vlkbmnm0bi22yqwvr5q5gm4q"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.5.0"; sha256="1l3yfi4vx3yzw8i85ymy0fj1k1q66gyv4fjl5mbq5nlz8g6r19y0"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.5.0"; sha256="01mr5crin0ak57gdm1p36m3066a2x2m81g74minf2ijghpnb67q5"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.5.0"; sha256="0icm9jnyi46bp5knsxmb1fv2fghimrmwskq9p5yzgm1jhr43qgjd"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.5.0"; sha256="0d3y2837n0k74mn2bv75x3f3bm1xlzfh728221vfhyj9xzbs6131"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.5.0"; sha256="04ba79mky8m6wiiwi0fkcz9c6gfk1c81pypz77258qwbi98p6y32"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.5.0"; sha256="0ligmwg9f6qs99ngnk81imlp6n48cw5jjnqklaw8dcy8ph016vhf"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.5.0"; sha256="187bw5svsbssyjm3rdy9lh5wp5r0wkspxska80hqf26swbjl4ymm"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.5.0"; sha256="1gairkwy29jg949i270ndzsa6f9zwcs7i61lj6w26piz6hcjgv28"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.5.0"; sha256="1wk2mfd1qg1ycfqsd0v5zp470cb49vczsarar8wfkly5mvl561m4"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.5.0"; sha256="12xkw4s3ycr9fpz2q36rcg3mhvzplmg8fmigcigd5vg0g5029wi8"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.5.0"; sha256="0jwrkhdfykm71cn1smzzp5wjph04v687lvk0hyazd1hb5wwhwkyi"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.5.0"; sha256="105qz16b2l2sbr1r8if3bkc6w0cll7lhg67j09l8a9y9f4ddwa65"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.5.0"; sha256="03hrggzl4j29k9fvvhzhbil506k02lmnpl3rm63m3x35416g7wsj"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.5.0"; sha256="0kd4cz233y4kld8gb3qhnv5bjm9jpfngkc5d6y4bk91jkq1d4g3a"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.5.0"; sha256="0cm5ja8l1mkvzpv68gg4aimy68kxzpppps50iwhxc191h2dxkl4r"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.5.0"; sha256="1l793h8x3bhm8nydxf517gi8b9paf0plw6i3kmi84gwczvywffqq"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.5.0"; sha256="1g131cjhlxjppvrjdcl1rwz8856f110a467lyp1kk0pvd2d0xhvz"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.5.0"; sha256="0z7ypnmi68spzr4dv98lswj5wna0rwnwvmbw1g6ihi25vd26cd37"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.5.0"; sha256="1hzwrc6l41psr1f3zjm71b87rf5bjzwskkanfv1rx87ynq1h2m81"; depends=[MeSHDbi]; }; + MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.6.0"; sha256="0j9jrfi1fin7siaqn3q06s1aqh84f2x15sr5vkd28wzxxiv12c58"; depends=[MeSHDbi]; }; + MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.6.0"; sha256="1ka55k5g7h8rzy6qab4q06k5h1mn5ryhhp28hvbb393yhslavgya"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.6.0"; sha256="12fwr628gn4mmp876j9lli637p1452hwqm8sa383jyf3hvj5a0c2"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.6.0"; sha256="1yznkpsdl9y560sh66q36ks5h1k0qzkc6crgrwfalpq6g4ik353w"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.6.0"; sha256="0nxk5s2gqa2gswhzmg8isxsraf06plcwhwj8k6s1hvr2lhiq4dmd"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.6.0"; sha256="1dqn7arsrrmwxznkal10cpzz2409i28b0n2jivkxnyfbkhvfpxrn"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.6.0"; sha256="1xn14fwbs2g60b5v6jagq0yjlywziv9ds7djz9pjaagsxpk9clip"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.6.0"; sha256="033q5j9q6nrkb8fingqhccg1qmka1j518pppz7lhgbjzskvlqkmj"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.6.0"; sha256="18qypw8l98gk71lxkffvip00qqn1kdhr4k3bgmv9r9j3k00imdf2"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.6.0"; sha256="02wx25mh7967ymqkapj4k4qh0f0xfxqkklmz8xyn1pkvk0mr1zr5"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.6.0"; sha256="0w9m7pbayp967pcx34f7a1snk72ww093w445gf5maagifzlffwak"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.6.0"; sha256="1s8vmdqnydla1psnbz0n1rrm9w987jy8j04a4av2cr4q5lciv551"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.6.0"; sha256="1wn365f0j5x19mwzycgkr3r5c73vmm509622p5jrmx83ndx2gk94"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.6.0"; sha256="1yinkkinzn9jhxmr1ri0cgcvlb08pvdrgz2fqnafxk55rihh5kg5"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.6.0"; sha256="1jni4l7ha3asjpg9nvwh17kmbfgkg2gvmp79wjdd7b3mpw1lrm1z"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.6.0"; sha256="1q46w0v4vni4b1qfx291xs0v5p7rgjsj5pwpfkrvkviy780c5nb9"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.6.0"; sha256="1d8j6sbx4n98yg3fygznrcczwimga96w7ibm1rw4jwg4nxsscizn"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.6.0"; sha256="1ycg7mh4pa7rb734x1swrfv8r0mxx6gxrlf5dnbwh0imdcxy1b5y"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.6.0"; sha256="0qvqs3vwbwc0bah348bmmhglvqmj9q7y7kk6zkrwc4337nfrbd2i"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.6.0"; sha256="0v84n2i71vdf71wj9yk7h89h1hvb5s0ixcdrzyhsi6a041bwq17m"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.6.0"; sha256="0wrngzyncgsrnl1ai98vaqzs2rmx3sk6ic9xdxkfkf8xb8hgdzjy"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.6.0"; sha256="0gvm30z9k7xnb98m3s3wk2f47kvb6h8318cjjhmbpniilfz0cl7g"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.6.0"; sha256="137267ibpcr159br33mqrvbnbr98rxc54l2wfl0hhfrgv1k25ccp"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.6.0"; sha256="01ghjn7fjhiy5pg27wl10kqcdlx5qnggzflrhs4kiyz5k8wa997h"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.6.0"; sha256="08hi6csc8lnfryg6jsjv8z1qz9md6ss6vd0f2szhanrq3j198f0z"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.6.0"; sha256="0wyrzfj5v1fgr7c61pdg0s3bpna24x50dzzvxv3bls0qzpn096hl"; depends=[MeSHDbi]; }; MeSH_Sau_USA300TCH1516_eg_db = derive2 { name="MeSH.Sau.USA300TCH1516.eg.db"; version="1.4.0"; sha256="109kvsdqvra8x392l82djbd46l8z4hv4z92785ivgdcnchsdjq7p"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.5.0"; sha256="07xvrvhyb0gfq2fx47prkcax46csrb3c2rmvik6lbm17h0ah55x4"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.5.0"; sha256="0y9afs85yqgyz9701fpwkz3y3wabwks56m1ar3qv8zap6s124fh7"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.5.0"; sha256="02p6g63rcfnx6db91njw33qrzbr4nra9ddwbwg23jz1vhqlxcv5a"; depends=[MeSHDbi]; }; - MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.5.0"; sha256="083pg2bc56s52rkv7mvbziq0hjrfndwja32jd31pxdd0cjdv3c3q"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.5.0"; sha256="1vx6h5pv7hygmgrd5wjdcx576bvr23xfhh4aba3a2jzsjwvg0c9c"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.5.0"; sha256="0c8ijwz4vcwcbf18jsf2z3wxis09h9wrsb9fki5wspgjc486lz9n"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.5.0"; sha256="03sd73jipya5zqdzqxd6iwnmwmxkqp1mz9hg2bzmfnx3jz3fd5sv"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.5.0"; sha256="05fandy9ig1arahaag0wa09gwz8g4g7bpyns0jchmw88044jvgqs"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.5.0"; sha256="03bysvpymrq4n4xa48hksm9vayww6gvjpncnb4q5891azja3drpr"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.5.0"; sha256="0vdxabqli7z2cpdq015jhaddzsxh23k7x0pzc28k8aqbp84czb89"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.5.0"; sha256="0cyn8lflhb8n4fkh7sm0ky9q5n640cwxks22a54x16bvr7bb7f1k"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.5.0"; sha256="04ihvbp7dlb4fb68snlq0imh3igfhacjsqjnjnwnm1xqgynzn6f6"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.5.0"; sha256="09g6wh866n2xbdy4xmglbk361zwiyywgxwbzndm8yd1xdkzc4myw"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.5.0"; sha256="00vm12fgmlw79bpkfbc4yrwvf8c6daw3fkxysag6qpjfsjrbdhlg"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.5.0"; sha256="1r6iyc1066g7bgil9d0dk5s23bz3bv7idn7k18kbgzm2j3dm9m5g"; depends=[MeSHDbi]; }; - MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.2"; sha256="0zynbckkdxwd90v4k2gv7cmwg0m80jqq5khrzxb73jf7bqn85d3n"; depends=[AnnotationDbi org_Mm_eg_db]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.6.0"; sha256="1yxhywyzzak1h13vb7dqnqn016l8zjafq2y5dg7gyja1njwln4sr"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.6.0"; sha256="137zvl1628jxrrn5n2pv4p9j00nrrqp3bxibxspx760hwrf72qah"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.6.0"; sha256="0w5r34mkmfllrgqcvnv51yi9d9qpy88w2xnff388qf101n3pr8zd"; depends=[MeSHDbi]; }; + MeSH_Spo_972h_eg_db = derive2 { name="MeSH.Spo.972h.eg.db"; version="1.6.0"; sha256="1kqnms8zq7mspk1bp0in7c6rns0zp08jaji5a0dlryng6awirm2m"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.6.0"; sha256="0s4dw4hkgw9qkbcwp1pd7kvkjpbsiwnzmbp3x9448ljphi5x3fya"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.6.0"; sha256="1bb8cpb28amrxjdlq24vszg7nzp64crhsvckl9dgsw48mf4ijvlr"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.6.0"; sha256="0g09xgh4kzrqbaq1aif93bbbazkxggf36jsr4w2m5l7pdmbr9307"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.6.0"; sha256="11zcyybrwappblsbwylzmjvavmvr4p80q9308mgdc5wix9zzj1fy"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.6.0"; sha256="022c14njscb5d5146z3y85m2x5jxhq2lanj0nvba5jl0apzjxbb3"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.6.0"; sha256="123zq61pnb1fgm5w81ahdymb3fmyb3bassxqh3bzf592q5457sm0"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.6.0"; sha256="068qigbld4s7jj8001d21vi2k0ddqw74csn8xqhm245h31w8sr1v"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.6.0"; sha256="0is3w4snymmc8207lbwi8b1qi6kwm2v50k9aqd4x51acs292kyim"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.6.0"; sha256="0qdpw4s0brlmp6dvxdngzmflhvvz85x56mr1z72v3wf4991l41r8"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.6.0"; sha256="1al8lr6p7g0wpcjjkwl3sxwkgykc06mgmgm54y5bvrgdbqxydz1q"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.6.0"; sha256="0k366gpxn6kv9b8by516dqib3d5aclzf8475ci8vqrryaxh3ibsm"; depends=[MeSHDbi]; }; + MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; - Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.2"; sha256="0k6y8kk3xa0j76l23y8zh31xa6dvwq70b1akwzxlv4nikxdzc1m1"; depends=[AnnotationDbi org_Mm_eg_db]; }; - Mu22v3_db = derive2 { name="Mu22v3.db"; version="3.2.2"; sha256="0576rrlbh5ikik3wqrz83m3ah9dwmqi14fb52wjr31rrbw72qza6"; depends=[AnnotationDbi org_Mm_eg_db]; }; + Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; + Mu22v3_db = derive2 { name="Mu22v3.db"; version="3.2.3"; sha256="016dfa1pz5valjnqh9z73b931wk184vykv9xmz60xp2kj9ccrjzc"; depends=[AnnotationDbi org_Mm_eg_db]; }; Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; }; - Norway981_db = derive2 { name="Norway981.db"; version="3.2.2"; sha256="16wn65n0yydba5mji4ysxwipl263kz2sv6zkj16i8ri5zvnk5343"; depends=[AnnotationDbi org_Hs_eg_db]; }; - OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.2"; sha256="0h7pcpkz9fmqfam00a57g0dkwmmgd9fh54yz12hl23g2nhydswac"; depends=[AnnotationDbi org_Hs_eg_db]; }; + Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; + OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.3"; sha256="1vsfhradfhk087vzi0jzkd7qab72g0v0x9s1rr7wblw7wjz48299"; depends=[AnnotationDbi RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.2.2"; sha256="14q62rr08nwr2a4y26f4lnhxfwb2bx5dw1x0jyzdwk72pdslpwh8"; depends=[AnnotationDbi]; }; - POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.2"; sha256="0rz7nvvw19z0hmpni7yhds30hvw2dcy9p7knhj074hv9a6l174bw"; depends=[AnnotationDbi org_Hs_eg_db]; }; - PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.2"; sha256="1c89whi5iayjw3mqlw6793gr77y5kjs4j4fanl9waw9jxp0q2n5j"; depends=[AnnotationDbi org_Hs_eg_db]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.3.0"; sha256="11qd5mjqksvlsqsgljgaffrbzzbsnf8d1xx38a135fk3cgmk9vb4"; depends=[AnnotationDbi]; }; + POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; + PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; RaExExonProbesetLocation = derive2 { name="RaExExonProbesetLocation"; version="1.15.0"; sha256="1vvcc5zlpgbnqak4y2xywyd82j3s61wvhhp2ap0nni14sdxrl3hd"; depends=[AnnotationDbi]; }; Rattus_norvegicus = derive2 { name="Rattus.norvegicus"; version="1.3.1"; sha256="0bpd7i5jvl2jvf822mhxankx7cqqr4l70xp4f7hcknxw3lxia2f1"; depends=[AnnotationDbi GenomicFeatures GO_db org_Rn_eg_db OrganismDbi TxDb_Rnorvegicus_UCSC_rn5_refGene]; }; RmiR_Hs_miRNA = derive2 { name="RmiR.Hs.miRNA"; version="1.0.7"; sha256="0pybw908mlfrskwhnhc0bfaaqw2z13kvr10apf68s74zs0ss57b4"; depends=[AnnotationDbi]; }; RmiR_hsa = derive2 { name="RmiR.hsa"; version="1.0.5"; sha256="1c663vxjxgrs4p9wfbg0zli5qqbvq6hp11kzbqrn70ndkpsbnb3z"; depends=[AnnotationDbi]; }; - RnAgilentDesign028282_db = derive2 { name="RnAgilentDesign028282.db"; version="3.2.2"; sha256="088bkg2j4rwg97q7n6v4abvvw5cfdfkr5kwzf75bbvv6nmzid7pd"; depends=[AnnotationDbi org_Rn_eg_db]; }; - Roberts2005Annotation_db = derive2 { name="Roberts2005Annotation.db"; version="3.2.2"; sha256="0i7baybh8rly2v09rla7x6n5x5rvyr2wvc14cjavb32wihg42jpb"; depends=[AnnotationDbi org_Hs_eg_db]; }; - SHDZ_db = derive2 { name="SHDZ.db"; version="3.2.2"; sha256="0rw33wa66fy00hbixgp78h6ykyxs8v9f9dp5dkp4c637cbplgvr5"; depends=[AnnotationDbi org_Hs_eg_db]; }; + RnAgilentDesign028282_db = derive2 { name="RnAgilentDesign028282.db"; version="3.2.3"; sha256="00qri74spbpym7krk1clx0kl429b1592afk5bfr3j8j3iw99g4af"; depends=[AnnotationDbi org_Rn_eg_db]; }; + Roberts2005Annotation_db = derive2 { name="Roberts2005Annotation.db"; version="3.2.3"; sha256="1fc95c6x36n7zbr5ca680hyffxngma26gz0bdzylbw0w4mqmj6ga"; depends=[AnnotationDbi org_Hs_eg_db]; }; + SHDZ_db = derive2 { name="SHDZ.db"; version="3.2.3"; sha256="077xy2zx3f4c01di18ki32xmrwgsc1qjci3wj33nmgsy5925zdxs"; depends=[AnnotationDbi org_Hs_eg_db]; }; SIFT_Hsapiens_dbSNP132 = derive2 { name="SIFT.Hsapiens.dbSNP132"; version="1.0.2"; sha256="1akqhmv9hp41q2jrvz4xvpdi30c4c6v4xbz6ykn6pdf0217p7xry"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; SIFT_Hsapiens_dbSNP137 = derive2 { name="SIFT.Hsapiens.dbSNP137"; version="1.0.0"; sha256="1472abqanbwziyynr851xzhg7ck8w1n98ymmggg7s46hzix5mlj8"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; SNPlocs_Hsapiens_dbSNP_20090506 = derive2 { name="SNPlocs.Hsapiens.dbSNP.20090506"; version="0.99.9"; sha256="10943wbc56mz8ywcd71ndbdz7h3a9a17mzfdvj237wsgp62arfh6"; depends=[BSgenome GenomicRanges IRanges]; }; @@ -248,78 +258,88 @@ in with self; { TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.3.0"; sha256="023n916nxmb1l42sbzlknfmg6y1ad2s27bfhhxpvwl2c8mbbi2ci"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.3.0"; sha256="06ax8wnqzi0jk0c4asxczvfcfg03b46vksfr3lfcnfij96ksb9mh"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.3.0"; sha256="0h0n3yqdzqip1ikqq396pziyn0l5651yg87bb0cgc3gy2ldsrl74"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.3.0"; sha256="1kgwb63z37zq5mspqzf2rb09vl8b71kn8aa3fsmyn8phmhay98zw"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.3.0"; sha256="1wjzhbc6kqxdwbl1g1nc3ljvphqd7d9qx9dgfr31x100ddjgpkc6"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.3.0"; sha256="0bmc3hi953dildf89in9njwpy32mddxynami04z903ijsm26nkvi"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.1.3"; sha256="10250vgk5b9k7852n0ah47c4n535603mdm4swwlwbsh44438n544"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.3.0"; sha256="1gdmfi5v6cy22f7np2sn51l1vnq0v689iyg59sm7fhfggvlykndf"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.2.2"; sha256="15p0n8snfsc3lml2zsmrsn5w4nq3h0pgvw82z0y6i43g0wg8fzl6"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.2.2"; sha256="0cvqp1pv632br5bd84g2ymb67hm4ijwqk43pycvwb2fvhzgx089c"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.3.0"; sha256="08qf0n15hm0wacvp70gr5pcwn1y64zk0z0ya3cx5h1w6ci7cpdlf"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.2.2"; sha256="07lhh3xk4n8nsq6an5hz4r2mgm3m05vx34nhxd7x4lvy224ar18h"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.3.0"; sha256="13qhwb5x4813binp8grl41rd07j1h9agld8zmnkiqw7c1sdz3q7b"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.3.0"; sha256="0jpvrn8wq4wl4d2kh4n133nla43f94ym2rjh5f45d4kikqk6xl2i"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.3.0"; sha256="18hbrp5agka35zhqh4d809yx16brri5hi08pcpw41v3q3pk1599c"; depends=[AnnotationDbi GenomicFeatures]; }; XtraSNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.12"; sha256="0a27y0ngg760y5wwcja4dpd7cjd8h5zg1s2b3a1r54s21k65zny3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; adme16cod_db = derive2 { name="adme16cod.db"; version="3.4.0"; sha256="1vn9s1lrl6zzs00madb111fdzqjfb45mprpjqap8bvib65942rvq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ag_db = derive2 { name="ag.db"; version="3.2.2"; sha256="1d0n0vn0jyr83dli5dsv4hk9l8szgk0lcnxgrlh49bh3bspdkghd"; depends=[AnnotationDbi org_At_tair_db]; }; + ag_db = derive2 { name="ag.db"; version="3.2.3"; sha256="1h0nb5z742pbh7hc8bwqkk9vh16kac8m3h3bh4v5flqfqw6rn8d0"; depends=[AnnotationDbi org_At_tair_db]; }; agcdf = derive2 { name="agcdf"; version="2.18.0"; sha256="07hq41dwqs7yy2sck8p7zl3v9x4bgl35kkycpazz5ql2g5zy6b7j"; depends=[AnnotationDbi]; }; agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.2.3"; sha256="1x2ac300nhd2k7wi3677jflymhyqk5bcrpfrnv1qxpbkkghsng7x"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.2.3"; sha256="0pwc6i5v414ykrvhrh53c533g28l45hj0nldmvnz84gq9ppl3n6d"; depends=[AnnotationDbi]; }; - ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.2"; sha256="0780d3y44qf89yfvx6rk8sqf6f6h1m7b8vkv302p63qwanni3rwr"; depends=[AnnotationDbi org_At_tair_db]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.3.0"; sha256="1w8bylv1v1v4v51jwddvvq12j1gxm0p53s640w4h07p00d28szjv"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.3.0"; sha256="0jnkdy084zl3mpyhnxgfmc15sf6kb5hn47h3380s6w7chxz7c4as"; depends=[AnnotationDbi]; }; + ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; - bovine_db = derive2 { name="bovine.db"; version="3.2.2"; sha256="00rr0jihd5ch29phxsrij3l764m3aq154rhh5riz2x781dpmmms1"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.2.4"; sha256="1f8swzmr8z0m0c2xcfwn7iah8ws8pv851857rgn86xjqsfn7f39r"; depends=[AnnotationDbi]; }; + bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.3.0"; sha256="18206lazpa4xn82wfz17l2n51rkw3jisqbk04msb8s39fj6zfnkq"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; - canine_db = derive2 { name="canine.db"; version="3.2.2"; sha256="03dmgi8v75vazxjx2p1flk41264vdj73m0k65plpbjybjpa7r72k"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.2.3"; sha256="0ng7prqkb65n4hrpssiza4l9m6k42ld6adap33jl48yih7lml8dy"; depends=[AnnotationDbi]; }; - canine2_db = derive2 { name="canine2.db"; version="3.2.2"; sha256="15diwc2gvcaa79japppx6bfn086h8rrydpllmpvayj1ym7q3wljd"; depends=[AnnotationDbi org_Cf_eg_db]; }; + canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.3.0"; sha256="0d6vhp39i5f7mmv6n5hq4m9yk0yj3kdpgnbfdhnzi400apf53da1"; depends=[AnnotationDbi]; }; + canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; caninecdf = derive2 { name="caninecdf"; version="2.18.0"; sha256="1f7pf3y4ccmj6681haqk8ds3dlzkv99s22m2r462dnnf38n17l3p"; depends=[AnnotationDbi]; }; canineprobe = derive2 { name="canineprobe"; version="2.18.0"; sha256="1y70rbxlbgx58vaxp1ry5jngvzz9prcbgd2ji00074ilx4k2cxn2"; depends=[AnnotationDbi]; }; - celegans_db = derive2 { name="celegans.db"; version="3.2.2"; sha256="17lk9gbm6hb99l0akc9sfvak89va2h4gxi5mnklpws27w7s6jzrp"; depends=[AnnotationDbi org_Ce_eg_db]; }; + celegans_db = derive2 { name="celegans.db"; version="3.2.3"; sha256="03ar84ji94a5v8s5ykcv4c72dxsmqkiyrz31dfc5ssvn7cgc9srv"; depends=[AnnotationDbi org_Ce_eg_db]; }; celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; - chicken_db = derive2 { name="chicken.db"; version="3.2.2"; sha256="19ypq7sadvjdggzp5w1nk1jhxn9vmxpvwcnwczdyxx7f0y3ai1mp"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.2.4"; sha256="0jp7264f83ss94m2i4r9kzcgcpq54344vqvjb51a11xf68hkcmj8"; depends=[AnnotationDbi]; }; + chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.3.0"; sha256="0zqaps2cf6c8zsra9x6z98dgpyp65hc7p1bx5qjn047v24swpgs5"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.2.3"; sha256="0cj1m9xddrd1dk71x25dm72smwmvpab9z5q2lp8qj9cc1xxz1amw"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.3.0"; sha256="0n655psk47zvdgv4kfjr8ffqz78pimvqbhixlscfiwss01vaspa0"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; cottoncdf = derive2 { name="cottoncdf"; version="2.18.0"; sha256="0xfwwla941fbxddykgizpar8dh8q459src7kc5wyrsd3swp3zyp5"; depends=[AnnotationDbi]; }; cottonprobe = derive2 { name="cottonprobe"; version="2.18.0"; sha256="04mfjd3a7ikif4pv46s6h9dj2s912w8ihg4yyiii7s3jlmvy62ah"; depends=[AnnotationDbi]; }; cyp450cdf = derive2 { name="cyp450cdf"; version="2.18.0"; sha256="1mbqn9940sxc0ksvykdk3i4jvnkv9q91igwn1rwmv2z18hz18qf0"; depends=[AnnotationDbi]; }; - drosgenome1_db = derive2 { name="drosgenome1.db"; version="3.2.2"; sha256="13jwvbngrp45nn0a9x134n8y9fi4ibh7bqvnpz6am9sz7xz07lf0"; depends=[AnnotationDbi org_Dm_eg_db]; }; + drosgenome1_db = derive2 { name="drosgenome1.db"; version="3.2.3"; sha256="1m9lpgy64a1wrlril8sy9vriq7l3nzw9yzmf5kis6lij6g8mk7nk"; depends=[AnnotationDbi org_Dm_eg_db]; }; drosgenome1cdf = derive2 { name="drosgenome1cdf"; version="2.18.0"; sha256="02x6kcnzayx3adz5kjrmfcly36j6j5xwwknd16nskh9050g8xg1y"; depends=[AnnotationDbi]; }; drosgenome1probe = derive2 { name="drosgenome1probe"; version="2.18.0"; sha256="1vzf8197nkbdqdpafpafxlkcy61d6mwd7wcbakdhq5493dwhdi98"; depends=[AnnotationDbi]; }; - drosophila2_db = derive2 { name="drosophila2.db"; version="3.2.2"; sha256="1ih0icflafgvifmzzm57jaakd31wr91hs8fnkwbkmhah081llbkk"; depends=[AnnotationDbi org_Dm_eg_db]; }; + drosophila2_db = derive2 { name="drosophila2.db"; version="3.2.3"; sha256="1k19q093b76yy18ynxma27zk4d5q71sa0gj9n8gvgzvnmlzimpjg"; depends=[AnnotationDbi org_Dm_eg_db]; }; drosophila2cdf = derive2 { name="drosophila2cdf"; version="2.18.0"; sha256="1w8k5br8nl7m5l4r05af8nc2wwnlpxxl8ncvvhqx5annlb2ynrg3"; depends=[AnnotationDbi]; }; drosophila2probe = derive2 { name="drosophila2probe"; version="2.18.0"; sha256="1b8wnkyg0p7cffs3ka7by295jsys1sx2gpbj2j63239f0dylpl0i"; depends=[AnnotationDbi]; }; - ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.2"; sha256="0r4ywlk2gicy3s3g5v070n51j0incc38g2p9hhx82sgbgah8pjgq"; depends=[AnnotationDbi org_EcK12_eg_db]; }; + ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.2.3"; sha256="0svmbaiaabgrl1p4bwwsaxsa7x5s4sdyrqcwxrfsfsdzzgvjkaxj"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.2.3"; sha256="050ymh9jk2c21x4v56rbdigqp6ip6lv0sg7m6kr8sn8nqdl191mx"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.3.0"; sha256="00cjwrlkr2y6m4x30n39iykiwb4r36s7pp0qzg4v2xgq178n3jsv"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.3.0"; sha256="1p5br2s8wfrxa20kg800nn90qz29j8459wp90bkhprya2h8f2pf4"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.2.3"; sha256="1dgc6qlnr0cmc7xip945696nn5r6gx53fzgjjr80c0r2ql04a4fp"; depends=[AnnotationDbi]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.3.0"; sha256="00nk8rwnrl8j2k3pafppzaiipfmclhgdlbk54zj41jakrqd5cmk2"; depends=[AnnotationDbi]; }; gahgu133a_db = derive2 { name="gahgu133a.db"; version="2.2.0"; sha256="1ikyvj1gi39qbakpn5wl0823ljavng1k33zvpf2k24jdhdw927qb"; depends=[AnnotationDbi]; }; gahgu133acdf = derive2 { name="gahgu133acdf"; version="2.2.1"; sha256="0hvd4iwj2fjiqp1jzbz68i1w6jn77nrsih316jlj85bhb35f7cyv"; depends=[]; }; gahgu133aprobe = derive2 { name="gahgu133aprobe"; version="2.2.1"; sha256="108lki2bg55ysh485shxxsz1imm26g5a3grgcmxbfs4pgna3g4h0"; depends=[AnnotationDbi]; }; @@ -347,18 +367,19 @@ in with self; { genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; gp53cdf = derive2 { name="gp53cdf"; version="2.18.0"; sha256="11p69rxia8bqajix3jg34vnhczyxgpq50k5kdh878h7bn0mpg6bj"; depends=[AnnotationDbi]; }; - grasp2db = derive2 { name="grasp2db"; version="0.1.9"; sha256="1667hhk547fs8v7xsz2d0l19r2fksk1ymnpvag1jwspb2m10lq22"; depends=[AnnotationHub digest dplyr GenomeInfoDb RSQLite]; }; + grasp2db = derive2 { name="grasp2db"; version="0.1.14"; sha256="14y25k1fwh0272ws83rcpi25wc97r4z5mpmck8q9i9nshd5dmym4"; depends=[AnnotationHub digest dplyr GenomeInfoDb RSQLite]; }; + greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="0.99.0"; sha256="1ssh015yspl470wq5rnkxkb7xid27gzvga3hx9a9vj08iqal3rbq"; depends=[metagenomeFeatures]; }; h10kcod_db = derive2 { name="h10kcod.db"; version="3.4.0"; sha256="0f30n339ib8q478a7axjdh8hzrqws762m680ha0sxm3a0nxwapgg"; depends=[AnnotationDbi org_Hs_eg_db]; }; h20kcod_db = derive2 { name="h20kcod.db"; version="3.4.0"; sha256="0csh59bgpn5xyaw6bfg7nvi9vcvjd4f66f0dr3xh7c6316835mnx"; depends=[AnnotationDbi org_Hs_eg_db]; }; hapmap370k = derive2 { name="hapmap370k"; version="1.0.1"; sha256="0n6rmrqcbl665a1l6jxk1gn6518x4gxadzy5dc9k9v01cbh3qzmw"; depends=[]; }; - hcg110_db = derive2 { name="hcg110.db"; version="3.2.2"; sha256="06hbf6r86s5xvbn4l9hpikr504nb0wg680vvqflr3c9xpnaczfap"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hcg110_db = derive2 { name="hcg110.db"; version="3.2.3"; sha256="1rdm6fcfslcyx7hhl658pvgcyn8sl5d08mnp0hcdzx7j6p18ryin"; depends=[AnnotationDbi org_Hs_eg_db]; }; hcg110cdf = derive2 { name="hcg110cdf"; version="2.18.0"; sha256="1208b5sn9cdsvz4wa29ha5vp9mpvafkq0adj7nlzs4yav2z26van"; depends=[AnnotationDbi]; }; hcg110probe = derive2 { name="hcg110probe"; version="2.18.0"; sha256="0avr5dmm86b81fli5zb2vp6ax8imqxvc5bzsksq574a8rn6xf1dq"; depends=[AnnotationDbi]; }; - hgfocus_db = derive2 { name="hgfocus.db"; version="3.2.2"; sha256="0f9mr56mxs3abryhy19rz1kis4p1v9c595wvbmmk6d61gada2z7h"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgfocus_db = derive2 { name="hgfocus.db"; version="3.2.3"; sha256="03l9r1517varyl561s3x27fs3sasfkp2g5vwys8axqy7ixcllwcg"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgfocuscdf = derive2 { name="hgfocuscdf"; version="2.18.0"; sha256="0vxgz3wwjf4qqzpsa8d03s7p2az9xbzlkxkdj0czcj67nmq467ya"; depends=[AnnotationDbi]; }; hgfocusprobe = derive2 { name="hgfocusprobe"; version="2.18.0"; sha256="0fizkj2g1imslxk43ibf52nj8jzsfryq7h2pzhvqw5n9vnpinrc2"; depends=[AnnotationDbi]; }; - hgu133a_db = derive2 { name="hgu133a.db"; version="3.2.2"; sha256="18xcpbr3zd80fwx6ac99ng6wmv4r2my369gn559f936yganhnzsa"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgu133a2_db = derive2 { name="hgu133a2.db"; version="3.2.2"; sha256="077dng6gwss73vaxakkmk8dzy78cfb7872r4v1qj5drxp68wz1li"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133a_db = derive2 { name="hgu133a.db"; version="3.2.3"; sha256="16hl674id1c0y2gi6q5y7dfx7gacpdsxavw1ifar99h9pnigzskm"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133a2_db = derive2 { name="hgu133a2.db"; version="3.2.3"; sha256="1swh2j95f9xkvhi0lyvk4a1gyj5d1lgrsnc2fj57fh4l9763nzk8"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133a2cdf = derive2 { name="hgu133a2cdf"; version="2.18.0"; sha256="0lqllzvp0w3s46kjvpvjn1snz63im33m3hhvnkl3knb86k6pn3za"; depends=[AnnotationDbi]; }; hgu133a2frmavecs = derive2 { name="hgu133a2frmavecs"; version="1.2.0"; sha256="1qy2z6z135q8xncjqn1n31xg8az9wnwrz78cis57lzav9r0fw853"; depends=[]; }; hgu133a2probe = derive2 { name="hgu133a2probe"; version="2.18.0"; sha256="0ais6f92kmjmzywsdqvxcd5fs6y7kf0ip9wm62szhahyl9chwj9k"; depends=[AnnotationDbi]; }; @@ -367,45 +388,45 @@ in with self; { hgu133aprobe = derive2 { name="hgu133aprobe"; version="2.18.0"; sha256="15r9zy4g9p86344zf0w7m0vfln8js19kmr68vq670kncf6j6ypbn"; depends=[AnnotationDbi]; }; hgu133atagcdf = derive2 { name="hgu133atagcdf"; version="2.18.0"; sha256="0rbnhzwbv6nbkssdgsibjpnqfads7x9rpgy2n7qy02mkr6kysndg"; depends=[AnnotationDbi]; }; hgu133atagprobe = derive2 { name="hgu133atagprobe"; version="2.18.0"; sha256="1qxrdi0rjj8kcl8rl3lack5ky25n39hj5a91scd0fy32zvnazmk6"; depends=[AnnotationDbi]; }; - hgu133b_db = derive2 { name="hgu133b.db"; version="3.2.2"; sha256="0s5h54fqfmc3k1cgcaq0skdlnd7yzzwh9gvfnv4prg3mwvmsvacy"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133b_db = derive2 { name="hgu133b.db"; version="3.2.3"; sha256="1ia32fv32s6f0sdlvzz55ficivsrxyxwkavyrk435gfmnjy07xmv"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133bcdf = derive2 { name="hgu133bcdf"; version="2.18.0"; sha256="0dlg45pf35cff48704laryrxgwr0p31njki6c74ibxacpxmvwzv3"; depends=[AnnotationDbi]; }; hgu133bprobe = derive2 { name="hgu133bprobe"; version="2.18.0"; sha256="1i8v1fbjfnzv556551kbj13q9i0lvzjgvzq8xapmwph8y86bfcx3"; depends=[AnnotationDbi]; }; - hgu133plus2_db = derive2 { name="hgu133plus2.db"; version="3.2.2"; sha256="0x21g8iwr9zj29xj5y16byg4nbnslgkh8l5hxhayckz3hirzns5f"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133plus2_db = derive2 { name="hgu133plus2.db"; version="3.2.3"; sha256="0j855k58syb12pxhkpxf6g0yglzq8kprs3j14cfwif56d5xj8sx5"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133plus2cdf = derive2 { name="hgu133plus2cdf"; version="2.18.0"; sha256="03n9vmclv2ri6n88lsz8yzgsrz33vfclj468jv01h3is2gq09x99"; depends=[AnnotationDbi]; }; hgu133plus2frmavecs = derive2 { name="hgu133plus2frmavecs"; version="1.5.0"; sha256="1r3g4hqxxm3l054kx33bsl9qkd46mkd4d266pm0jgqih6mv5640c"; depends=[]; }; hgu133plus2probe = derive2 { name="hgu133plus2probe"; version="2.18.0"; sha256="1xdg6x6iv9xi0vdlfl4c65zvqs2946yd2bhr9nqhhyqp6h8ghsdc"; depends=[AnnotationDbi]; }; - hgu219_db = derive2 { name="hgu219.db"; version="3.2.2"; sha256="0im7537pfv25ayagbjvc5p83xkl4ppzr329q2qw4b3yknvj51fr7"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu219_db = derive2 { name="hgu219.db"; version="3.2.3"; sha256="1yv7wlz49pfjqwg5s9mzr31457imwn8cq97bg4m1ybib7787m134"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu219cdf = derive2 { name="hgu219cdf"; version="2.18.0"; sha256="14kbn7r84hp4vssxl8pfs7zlg34mdm4qf1m2dw7agrixmdblnz0d"; depends=[AnnotationDbi]; }; hgu219probe = derive2 { name="hgu219probe"; version="2.18.0"; sha256="0sy5q95yppyg8bvwc6prznqzl01xrbl0ic22rj2s8wwsrppsm3m5"; depends=[AnnotationDbi]; }; - hgu95a_db = derive2 { name="hgu95a.db"; version="3.2.2"; sha256="056wf0zqsnb0w3izwqwhk0fjnaxv1barp4ndlzyq9lzbp37skb2l"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95a_db = derive2 { name="hgu95a.db"; version="3.2.3"; sha256="11zahda5frpfr5dqz5p635ki0pzd0h4k7rs7x9q5480794kfnyzc"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95acdf = derive2 { name="hgu95acdf"; version="2.18.0"; sha256="1mxac5vd0vzn3k8357lf0j1476q3b7nx6nr54n6j84qi2nx1wknr"; depends=[AnnotationDbi]; }; hgu95aprobe = derive2 { name="hgu95aprobe"; version="2.18.0"; sha256="0sig3g5qmigv7vgcr3rpkn2cmcn2ljp0arhilni7yqsnzqn1dbma"; depends=[AnnotationDbi]; }; hgu95av2 = derive2 { name="hgu95av2"; version="2.2.0"; sha256="181bady90v89yx2gzwahhcl63aiypcx33pkfnjxkyq45qgb18bqi"; depends=[]; }; - hgu95av2_db = derive2 { name="hgu95av2.db"; version="3.2.2"; sha256="0rh6lf3017cm1k805v4c7dq551vjgjxdwqawin5jc03smbpi67wi"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95av2_db = derive2 { name="hgu95av2.db"; version="3.2.3"; sha256="12aiyg11pciwmlakn25k3rm0kskl0z8jv5brp8pshs6yfcsh4sn5"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95av2cdf = derive2 { name="hgu95av2cdf"; version="2.18.0"; sha256="1zp1y5awnkprkmk01rmn881y50bslfi8s33i8bws39am5xma0jfl"; depends=[AnnotationDbi]; }; hgu95av2probe = derive2 { name="hgu95av2probe"; version="2.18.0"; sha256="0hv0asd44b69h3n87j5ffi9i87w12iad74754wzxgfxihb0yn58g"; depends=[AnnotationDbi]; }; - hgu95b_db = derive2 { name="hgu95b.db"; version="3.2.2"; sha256="1snz8khvppwlalphyid21a366vz2c8barbx7da32klblwmryiyqi"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95b_db = derive2 { name="hgu95b.db"; version="3.2.3"; sha256="1ywjaxazqhij6g3qx1pad5w2xkjsm8gxxhhhlxvkjm8py4a3cacd"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95bcdf = derive2 { name="hgu95bcdf"; version="2.18.0"; sha256="10inx0p0155ii4464la0amww91ynyqqh59zyl1lfhnvkl38k6ylj"; depends=[AnnotationDbi]; }; hgu95bprobe = derive2 { name="hgu95bprobe"; version="2.18.0"; sha256="1y8i2cn0zh2jkyi9j8giv5i4dag2c7jd5zyaza72nsyj4qhgmccg"; depends=[AnnotationDbi]; }; - hgu95c_db = derive2 { name="hgu95c.db"; version="3.2.2"; sha256="1ckfn7nww2bha9vvdghijzrzpkfc0bv5pr1ph20lkj5hvn6bra2f"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95c_db = derive2 { name="hgu95c.db"; version="3.2.3"; sha256="15qp585208sssg21awccfgs5w13w5h108fgin43sva92v4j7jckv"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95ccdf = derive2 { name="hgu95ccdf"; version="2.18.0"; sha256="1mai2l81mwg3irncvddlcbcx24nvfk0gcx4h1r3mfg47smx1n3rd"; depends=[AnnotationDbi]; }; hgu95cprobe = derive2 { name="hgu95cprobe"; version="2.18.0"; sha256="0glbyjk0mfllfzwfj5hszmy4pwd5ghkb1lrzh215zzxyvnyb47fd"; depends=[AnnotationDbi]; }; - hgu95d_db = derive2 { name="hgu95d.db"; version="3.2.2"; sha256="1vqn87vln1mk4bxbd01jq6660z1px8nkyagbkhp1vy26cqwrmg5w"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95d_db = derive2 { name="hgu95d.db"; version="3.2.3"; sha256="0df03f5lhrrzcjfq3cv6746ay9yxdyd2zp5p6lnms6pb8mvbmix0"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95dcdf = derive2 { name="hgu95dcdf"; version="2.18.0"; sha256="0s60ibk6qsfqibhns2kidglvxkigia31yzr49b03kcazmwm4xqc0"; depends=[AnnotationDbi]; }; hgu95dprobe = derive2 { name="hgu95dprobe"; version="2.18.0"; sha256="0mlj28c82b21010rhj2pzpmv2wf3fis4dwsi7q7292bza2sxxi6g"; depends=[AnnotationDbi]; }; - hgu95e_db = derive2 { name="hgu95e.db"; version="3.2.2"; sha256="1fzw86wycjlgi7vym47p1ningl2vhcyj6rwlp9l93ayg16lkq2fc"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95e_db = derive2 { name="hgu95e.db"; version="3.2.3"; sha256="1crxr6pa23sd3f8p5yf86p325nh4krdlwsiz7fpxml3i7a7ggsab"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95ecdf = derive2 { name="hgu95ecdf"; version="2.18.0"; sha256="02y97vbhxn3c31q1i2z5l6jv51z8bk8p7vp1kb2y8rkmsw171brv"; depends=[AnnotationDbi]; }; hgu95eprobe = derive2 { name="hgu95eprobe"; version="2.18.0"; sha256="1daflz4s99xb0v91ckb96bzjqmgm334xsngz18l2bd6r8nkxhgzb"; depends=[AnnotationDbi]; }; - hguDKFZ31_db = derive2 { name="hguDKFZ31.db"; version="3.2.2"; sha256="1biz5imp5z6nippz2g5ky1j1zd9ckz1c1yi57rffxa3gc2nm35rh"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hguatlas13k_db = derive2 { name="hguatlas13k.db"; version="3.2.2"; sha256="14a1annbrvkh05akivhbm7p8pdsv6lknrlhvj8n3m5bxlbrr6ii5"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgubeta7_db = derive2 { name="hgubeta7.db"; version="3.2.2"; sha256="1g7wbbijj210w0g4cas6d7ig92ndsm6kfgs5jd7h55avsjjp7jcj"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgug4100a_db = derive2 { name="hgug4100a.db"; version="3.2.2"; sha256="05wb186mrz9rrffiap2ck4k4x9r5liyd3j85zm59a4pqanvlm2a6"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgug4101a_db = derive2 { name="hgug4101a.db"; version="3.2.2"; sha256="0l0p4c85p2fak8ip9jyas5g6axziq0jidkmz6baigg7cxrjl4m4m"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgug4110b_db = derive2 { name="hgug4110b.db"; version="3.2.2"; sha256="10qclkkxs7hi0h5h30zqbz2yija9vrp482xahygrc55ihwgpqr3l"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgug4111a_db = derive2 { name="hgug4111a.db"; version="3.2.2"; sha256="02sx9ph6n6z36q1a03dpld8lki9in082akiaf2g115inmcd7ss0h"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgug4112a_db = derive2 { name="hgug4112a.db"; version="3.2.2"; sha256="07pclh2cabf5nmf631x8gs713mjz2w132ilmlr284s1m3667p94r"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hguDKFZ31_db = derive2 { name="hguDKFZ31.db"; version="3.2.3"; sha256="1pm0w9jdppd4xx9civh88b15nzyqv6rs7d8yljv6yf5sspxl8var"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hguatlas13k_db = derive2 { name="hguatlas13k.db"; version="3.2.3"; sha256="15psxwig9d836wdf410i093k0hbdxnzd9lix4d544yz160v93di0"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgubeta7_db = derive2 { name="hgubeta7.db"; version="3.2.3"; sha256="0dh1068ph7cq343df1csyc4j9jix9gcc4bfkvvc2whyq0a1kzr8h"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgug4100a_db = derive2 { name="hgug4100a.db"; version="3.2.3"; sha256="0crvsnrx58smj45115qb05hss1qkpwmydpdm6qbzh0j16ab7p59n"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgug4101a_db = derive2 { name="hgug4101a.db"; version="3.2.3"; sha256="1hnz2m9q52mw4mxykvaiilsq0d0jmkq666py8zjh94sy0gsnhsqx"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgug4110b_db = derive2 { name="hgug4110b.db"; version="3.2.3"; sha256="0qpiiy6dklf9alrmjmmv51q09p7hq4w8frn8zy12glcm65h2vfcy"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgug4111a_db = derive2 { name="hgug4111a.db"; version="3.2.3"; sha256="0bd897592q92cf8bvl0hqkcxid451lwm36s7mpsvgb5yzw3rb63n"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgug4112a_db = derive2 { name="hgug4112a.db"; version="3.2.3"; sha256="0l80pblm047pvl5sqvasb6d45lazqhsff3w5lljiwzjhn0r7x5m3"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgug4845a_db = derive2 { name="hgug4845a.db"; version="0.0.3"; sha256="1933n2n6yky40nxf1qlbpa6acjwfr07hbrpvvcick7m09al1wks6"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hguqiagenv3_db = derive2 { name="hguqiagenv3.db"; version="3.2.2"; sha256="0jbvggypg50wkcxyx7xxn87cnhvbyndfqkgdzrpcm8p1czw2gkvz"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hguqiagenv3_db = derive2 { name="hguqiagenv3.db"; version="3.2.3"; sha256="1ylji60m2zb8ialbl5wdrxy425sriq17z3bg8ikvc5b5gjsw6l7w"; depends=[AnnotationDbi org_Hs_eg_db]; }; hi16cod_db = derive2 { name="hi16cod.db"; version="3.4.0"; sha256="0ydi0jljx8igzrqaspr9yywv43h2zimm9fk7xc55nm6mnp5jl7kl"; depends=[AnnotationDbi org_Hs_eg_db]; }; hivprtplus2cdf = derive2 { name="hivprtplus2cdf"; version="2.18.0"; sha256="1jv4qzajikz7x4vq87wzn7hf6hx9r4c2gkjhfp93kqzwzddmigf4"; depends=[AnnotationDbi]; }; hom_At_inp_db = derive2 { name="hom.At.inp.db"; version="3.1.2"; sha256="1ka9ssjfxml9sz9k83bs6icbkkyz581svh0pwpvpifzg79qapzwi"; depends=[AnnotationDbi]; }; @@ -420,11 +441,11 @@ in with self; { hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; }; hta20stprobeset_db = derive2 { name="hta20stprobeset.db"; version="8.3.0"; sha256="05blv54srnw7yrs8x32syzk1xdksrl8gswk837m7qjgciq8hazcn"; depends=[AnnotationDbi org_Hs_eg_db]; }; hta20sttranscriptcluster_db = derive2 { name="hta20sttranscriptcluster.db"; version="8.3.1"; sha256="0ana9fg3ms22m394w8qbfvfy663l0r163w0qfwh5ir59rs4bpalf"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.2.2"; sha256="0hkkpxh7737dv6msjkfir84sh85fgy9rz3h3mndsslsfjn7j17kk"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.2.3"; sha256="0sgi7pbkndcpl775qn36rdlsm4j6ip2lfk0cmkh8zqryrj3yq6hh"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133acdf = derive2 { name="hthgu133acdf"; version="2.18.0"; sha256="1a5b421lx0nxy3mrrxjxifwjpnv289c5q2a89xhnkwlcfhqlzqrp"; depends=[AnnotationDbi]; }; hthgu133afrmavecs = derive2 { name="hthgu133afrmavecs"; version="1.3.0"; sha256="0466xgi67r5rpp7cs06ib0cr6vvx8d881g5l96b8sh9948pbn4ss"; depends=[]; }; hthgu133aprobe = derive2 { name="hthgu133aprobe"; version="2.18.0"; sha256="0fanrxa21h961zsgzjrv4mzv8psd3h9sjxrzr126ca8qfqghvkc3"; depends=[AnnotationDbi]; }; - hthgu133b_db = derive2 { name="hthgu133b.db"; version="3.2.2"; sha256="1vzhjqf5qh5j7wpgrl8p12b1fn6cy5nk643p1bq26cz3xr4r593a"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133b_db = derive2 { name="hthgu133b.db"; version="3.2.3"; sha256="1iypcyzsiqria9svkiggjprscvriihp78rk6rwb9p2n58ij31axh"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133bcdf = derive2 { name="hthgu133bcdf"; version="2.18.0"; sha256="0v12g1xsmycxhapzl6i5m7jq683k05y9yaq1asxvwls0viph6dv0"; depends=[AnnotationDbi]; }; hthgu133bprobe = derive2 { name="hthgu133bprobe"; version="2.18.0"; sha256="1cqv6zwdxgc27x1h6y6lqzdysx40bbiy1ywcxky4yc611l1lxbv5"; depends=[AnnotationDbi]; }; hthgu133pluspmcdf = derive2 { name="hthgu133pluspmcdf"; version="2.18.0"; sha256="0bslylkmgrq9v1giz87kcikmxbs8yawpylxi0s1n6q4rcc2yg61y"; depends=[AnnotationDbi]; }; @@ -439,19 +460,19 @@ in with self; { htrat230pmprobe = derive2 { name="htrat230pmprobe"; version="2.18.0"; sha256="0xpyj6c8j4icx25yk570b4gnfqz8zrsp8wlsw8424xvkviz0wv4y"; depends=[AnnotationDbi]; }; htratfocuscdf = derive2 { name="htratfocuscdf"; version="2.18.0"; sha256="0jqn7y17sjn2cg8lidsbyzwpjygjs553gaw72g6v2kxj7j0fhfx9"; depends=[AnnotationDbi]; }; htratfocusprobe = derive2 { name="htratfocusprobe"; version="2.18.0"; sha256="1yxpb9pq4gbmq8s6szlbnc70ngqgi5gwqxx3far673gm5czdlfzi"; depends=[AnnotationDbi]; }; - hu35ksuba_db = derive2 { name="hu35ksuba.db"; version="3.2.2"; sha256="0bbqjazg7441bm7s5giax43w5zl4k6yrwaxjwwxz9rmkq1vqs1j7"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksuba_db = derive2 { name="hu35ksuba.db"; version="3.2.3"; sha256="0cb7dki9j1j8q1d43b3943wnsja2y23dqfqdza3flc7wvrgiflds"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubacdf = derive2 { name="hu35ksubacdf"; version="2.18.0"; sha256="1aw41anp99r0m0c54yibvh3nzswi5wnqv9z7dwi5396sd5sniy81"; depends=[AnnotationDbi]; }; hu35ksubaprobe = derive2 { name="hu35ksubaprobe"; version="2.18.0"; sha256="0dnsch3wdcgffbg1ypnnmsxlrclk9wji11skcs1gih2f7wi4pk05"; depends=[AnnotationDbi]; }; - hu35ksubb_db = derive2 { name="hu35ksubb.db"; version="3.2.2"; sha256="1gazpw4n0r4dmjvigljcci2wv656ccyvpsxczhhh43yfaskcxk55"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubb_db = derive2 { name="hu35ksubb.db"; version="3.2.3"; sha256="1h8vry8ydlzlg1f7n3viwhlgaid1c2a9kkip9qhnvnszw1zc5xjq"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubbcdf = derive2 { name="hu35ksubbcdf"; version="2.18.0"; sha256="0anzhbn7ad5yv3qd4vwxaag809yb9saqwx6575iwc9ha5w8hwv2m"; depends=[AnnotationDbi]; }; hu35ksubbprobe = derive2 { name="hu35ksubbprobe"; version="2.18.0"; sha256="0wml8g7nizljjfxq6xbbld3b2lsl1p8rzdmdqg5h81ncg7xhxy7c"; depends=[AnnotationDbi]; }; - hu35ksubc_db = derive2 { name="hu35ksubc.db"; version="3.2.2"; sha256="0xnhaqvgs0rdvn9prxkq2hi7wxb6z05446dlh2b365dsmvy87pwr"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubc_db = derive2 { name="hu35ksubc.db"; version="3.2.3"; sha256="1hq2p8lall1yzm061f8arykgg3a2x31rn5hfkhwzxhs0jxdispah"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubccdf = derive2 { name="hu35ksubccdf"; version="2.18.0"; sha256="0fycaw7sngcj50qh8vw594g7i0fw9nmfh1lw72bc3i8jd5y08npi"; depends=[AnnotationDbi]; }; hu35ksubcprobe = derive2 { name="hu35ksubcprobe"; version="2.18.0"; sha256="1s22447qznyrlwpa98wric7xv2aj1qchd5wgq1zgwhg3gcj9lvmb"; depends=[AnnotationDbi]; }; - hu35ksubd_db = derive2 { name="hu35ksubd.db"; version="3.2.2"; sha256="0af1dr9mqxkl8jkpbm9f6ifs7xrzjsrsv57sxfcm55h3p12fdw7n"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubd_db = derive2 { name="hu35ksubd.db"; version="3.2.3"; sha256="0jp5mpvg0amxkbxla2p81a3zvdamzypgplf6dh246ak3wl9pdxai"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubdcdf = derive2 { name="hu35ksubdcdf"; version="2.18.0"; sha256="1ws1mfgi1bndlwhr049bssj6cmd819klp1vwnqppklggs081y22v"; depends=[AnnotationDbi]; }; hu35ksubdprobe = derive2 { name="hu35ksubdprobe"; version="2.18.0"; sha256="1vivxdpg6wn29jwfnw7brcqav1xbr62llqk13dgj10x0gvjmv26w"; depends=[AnnotationDbi]; }; - hu6800_db = derive2 { name="hu6800.db"; version="3.2.2"; sha256="1dsjs3km0qr1y49r0m2vl04jqlcgnywvcv1kayn8i04rg568zsy4"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu6800_db = derive2 { name="hu6800.db"; version="3.2.3"; sha256="05v13rllfzjg2p35r21d58qxvcxg37ywpvr4ng23bvkrr0qrbx64"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu6800cdf = derive2 { name="hu6800cdf"; version="2.18.0"; sha256="1anddmc7j8x79nrglzmyzdvpwhy8aq6b87hqh7gr40g3d6hxjg06"; depends=[AnnotationDbi]; }; hu6800probe = derive2 { name="hu6800probe"; version="2.18.0"; sha256="1fnkwifpzv0rkb9f5b789f2r5vvz9riwiip5wmyanw2gzdyc2vr0"; depends=[AnnotationDbi]; }; hu6800subacdf = derive2 { name="hu6800subacdf"; version="2.18.0"; sha256="0ckywgdz9n9xz162jw6phj3qwdkiwjb4ya86a3imgb71k3w181wz"; depends=[AnnotationDbi]; }; @@ -472,7 +493,7 @@ in with self; { hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.4.0"; sha256="16ynwlnl5qkf3in7b08lf8k5v1q0sr0zd2hl52pl8yvpqxsm7sdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.4.0"; sha256="07cza2h7r0ipc4c3z14gw2vca4zqx2l0s41hz5fj0g6ss2a7n2qj"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.4.0"; sha256="1xqwq17xvmfbhy89di2gwg8c7r52ihp50qckqiqi0qdv5w59vbfj"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.2.4"; sha256="0yblrj9p4pihxdhgh649dlciwqhx7538ni4mk02wkrk66h3n6cpc"; depends=[AnnotationDbi]; }; + human_db0 = derive2 { name="human.db0"; version="3.3.0"; sha256="18kfi5g4v2d15dkkn4nrm14cqaz47ihaj2w4c2bazq0qcyc4iy34"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -499,9 +520,9 @@ in with self; { illuminaMousev1p1_db = derive2 { name="illuminaMousev1p1.db"; version="1.26.0"; sha256="1sxqwrc3697361jp69xy9g8w5a699ifjvldqi9ks538h5yc157z1"; depends=[AnnotationDbi org_Mm_eg_db]; }; illuminaMousev2_db = derive2 { name="illuminaMousev2.db"; version="1.26.0"; sha256="0vwi309ymhrbpa9dyk0fwqy7bfwvvp67q39xjav1s9npi3slv1h3"; depends=[AnnotationDbi org_Mm_eg_db]; }; illuminaRatv1_db = derive2 { name="illuminaRatv1.db"; version="1.26.0"; sha256="1krpp3pb3h2nrk5jrx54a3v6473qsjnz5wksysy8p4zpisvnxyfb"; depends=[AnnotationDbi org_Rn_eg_db]; }; - indac_db = derive2 { name="indac.db"; version="3.2.2"; sha256="0zyfhq93csg0m58rfvgk42mdczhqgsbmazclcvnm405dka64p18c"; depends=[AnnotationDbi org_Dm_eg_db]; }; + indac_db = derive2 { name="indac.db"; version="3.2.3"; sha256="0jjkiyhjcjgk9888a96g5w80k8a652cww5dhidbdiq5d8gakbnji"; depends=[AnnotationDbi org_Dm_eg_db]; }; lumiHumanAll_db = derive2 { name="lumiHumanAll.db"; version="1.22.0"; sha256="0kn2m31b4q8r1lm4iwda9i62la4akj0c35pi3khbfvkmdrvbvhd2"; depends=[AnnotationDbi org_Hs_eg_db]; }; - lumiHumanIDMapping = derive2 { name="lumiHumanIDMapping"; version="1.10.0"; sha256="0xm58dggm2m3mb13v8avvji3prgbdxp7jd3lw7xj6hrnw2mghgg6"; depends=[AnnotationDbi lumi]; }; + lumiHumanIDMapping = derive2 { name="lumiHumanIDMapping"; version="1.10.1"; sha256="0j29cd01z840jg4zq0yczjsqnya1vpx6hajqdq96msiy4i5fj534"; depends=[AnnotationDbi DBI lumi]; }; lumiMouseAll_db = derive2 { name="lumiMouseAll.db"; version="1.22.0"; sha256="00iawk8wb1hnvmy898nl9hc85rfzzwi34lpnv2d37rw4wdn57z33"; depends=[AnnotationDbi org_Mm_eg_db]; }; lumiMouseIDMapping = derive2 { name="lumiMouseIDMapping"; version="1.10.0"; sha256="18mc7vwp2p53ns2paa4glj570shmbq9lk318g3p9nl09mxyadim9"; depends=[AnnotationDbi lumi]; }; lumiRatAll_db = derive2 { name="lumiRatAll.db"; version="1.22.0"; sha256="1yh0q8aw33xsn4phj04v0mhjn8xh3z06jrg7yfi9qz1c985z1gw6"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -510,33 +531,34 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.2.3"; sha256="0rgpifbwfk33h24i4a79968ppfnhfjqn4yfjrdnrzblmyysx9662"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.3.0"; sha256="17s27vzxlpzrz8hy9z91fl2azbg82519fy5j2mzrk3h6429v7289"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; - mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.2"; sha256="0p19wmdsxqvg5drgdkldnym2p44hyyqpzg8qrzc9d40r4dgdqhi5"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74acdf = derive2 { name="mgu74acdf"; version="2.18.0"; sha256="187k8y1dnnyw926h090gmkk1081sa91fn113lysll3460dqn3ylg"; depends=[AnnotationDbi]; }; mgu74aprobe = derive2 { name="mgu74aprobe"; version="2.18.0"; sha256="0813s2w5s9ahaqn91mkwzfckclv5jdphq17j2qwyzd4xqyxrmsbi"; depends=[AnnotationDbi]; }; - mgu74av2_db = derive2 { name="mgu74av2.db"; version="3.2.2"; sha256="12zn0wpbzx8bylfpwkfdmjrq8k80phgkv4408ria85vfv7bfakk2"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74av2_db = derive2 { name="mgu74av2.db"; version="3.2.3"; sha256="0680qygyrpr15yhs7r3670xl3a8v4jy1qxfqfyxnpp7h8z3kj6jd"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74av2cdf = derive2 { name="mgu74av2cdf"; version="2.18.0"; sha256="1cw5q8vkmd80g0dxv38qdki39h255bssf27yf0lf0jig9ra5w34n"; depends=[AnnotationDbi]; }; mgu74av2probe = derive2 { name="mgu74av2probe"; version="2.18.0"; sha256="02wf1xymaxd3hfyrbwxfw12klzf5c28md0h45rf41vzia0mkvr2z"; depends=[AnnotationDbi]; }; - mgu74b_db = derive2 { name="mgu74b.db"; version="3.2.2"; sha256="0r64azjrahdigmgi08qnrcr2m01byp0ggdpbc95a88wvs82zkznb"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74b_db = derive2 { name="mgu74b.db"; version="3.2.3"; sha256="0z98k0f9ycha48jb56lda25rnjlayz7z6jr8icqabhp5sbh95kgh"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74bcdf = derive2 { name="mgu74bcdf"; version="2.18.0"; sha256="0sivgn6srmak7k6p8sj382lsanc34xj5b6182ggnp872y8v6zx5b"; depends=[AnnotationDbi]; }; mgu74bprobe = derive2 { name="mgu74bprobe"; version="2.18.0"; sha256="0igrdbp2hmn550rcfvrscmvykbpm9sbnfa29walv1v57jy6wl7fl"; depends=[AnnotationDbi]; }; - mgu74bv2_db = derive2 { name="mgu74bv2.db"; version="3.2.2"; sha256="05k89p1wja6y7wjkivq6iwczmq60nm7jk51khksv8204a0vqzlgp"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74bv2_db = derive2 { name="mgu74bv2.db"; version="3.2.3"; sha256="0pzn86xmfv8yigk5fi1lf4zpg8a1bsqnm4x6jv6pasivs5lmpyya"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74bv2cdf = derive2 { name="mgu74bv2cdf"; version="2.18.0"; sha256="05w0dh194lncda9qdkmg52znjrnlnjc15fzplw147nyablq5m109"; depends=[AnnotationDbi]; }; mgu74bv2probe = derive2 { name="mgu74bv2probe"; version="2.18.0"; sha256="1kn4549s0kj0jpg7yx4lkc8gvxdfm7p21b6yy52ymhfgbv431sl6"; depends=[AnnotationDbi]; }; - mgu74c_db = derive2 { name="mgu74c.db"; version="3.2.2"; sha256="1hsrvppcapjsdny1n9c2bx72zbn65c09dhfxaclglxdfiq9mlfj6"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74c_db = derive2 { name="mgu74c.db"; version="3.2.3"; sha256="10ba6lz5f2c3mqajrak0yl2c76lswx267jgmdhq3d3322cfd6n2y"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74ccdf = derive2 { name="mgu74ccdf"; version="2.18.0"; sha256="01dbsxmv7r1r2n348gcdpkxqmciqyrf3s0handp3hl33s6pd8xbj"; depends=[AnnotationDbi]; }; mgu74cprobe = derive2 { name="mgu74cprobe"; version="2.18.0"; sha256="0ib5iyyp6mms5cszarczs82y2779d3cssz7hih1wm0vddbby40km"; depends=[AnnotationDbi]; }; - mgu74cv2_db = derive2 { name="mgu74cv2.db"; version="3.2.2"; sha256="0yxpcicqm1gj8mkbifmk773l7dp4256m3ms7qn6h13i13qximkqw"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74cv2_db = derive2 { name="mgu74cv2.db"; version="3.2.3"; sha256="131vj9z1hdhk86mgbay9rldw5czfpr7ag3fh58anrhdijkcyshcq"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74cv2cdf = derive2 { name="mgu74cv2cdf"; version="2.18.0"; sha256="18k1kahfwix3cs6kh2aml2mi39l3vjr526ajksljjk46n0bsf1r2"; depends=[AnnotationDbi]; }; mgu74cv2probe = derive2 { name="mgu74cv2probe"; version="2.18.0"; sha256="0rx2cigsi4bnm48vl0bbfh6k3k3cs8nv0x7k7j9vq5z9dniyzqf6"; depends=[AnnotationDbi]; }; - mguatlas5k_db = derive2 { name="mguatlas5k.db"; version="3.2.2"; sha256="1pdz7c6z9c6zwwrkl2jbf8cpf5yi0gs68fa0rmf7hs51p89qp7dw"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mgug4104a_db = derive2 { name="mgug4104a.db"; version="3.2.2"; sha256="0idqd6w17qjc2krlbv58x63cpdan7w9vviaciy1kmmxg03dqcz2z"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mgug4120a_db = derive2 { name="mgug4120a.db"; version="3.2.2"; sha256="01nc39c3kv8rhw4fdwa5b9sa2fhp6hm155kf3sjr1ylas1y5ycf4"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mgug4121a_db = derive2 { name="mgug4121a.db"; version="3.2.2"; sha256="1avgvryyyqbghjwk3kiy86dbpn5p6kcdx8h1b3dxzscbyd4s6z1s"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mgug4122a_db = derive2 { name="mgug4122a.db"; version="3.2.2"; sha256="0cg0jg9kmly3kma79aljqxmldjqk35vcjx8yd2hkkip895xlkkcl"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mguatlas5k_db = derive2 { name="mguatlas5k.db"; version="3.2.3"; sha256="08lw02r9wpc06pq82934dlfsrjjsaqchrsyghc8pgk6iqq1c3f9r"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgug4104a_db = derive2 { name="mgug4104a.db"; version="3.2.3"; sha256="1aqs943lff3q1g2dfl9cyxfpm8swkjcb4spi5drgw39g9m8p3dp8"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgug4120a_db = derive2 { name="mgug4120a.db"; version="3.2.3"; sha256="1qnzpww4wy926j4i10rfddng8ygav86ig9c301qwvw0ly235f0vx"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgug4121a_db = derive2 { name="mgug4121a.db"; version="3.2.3"; sha256="0947crjk8nj4bzgwz7anran7y2qhd1v8bp9f59ja3628rgjx6cz5"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgug4122a_db = derive2 { name="mgug4122a.db"; version="3.2.3"; sha256="0x4mrjqd9wnppkp757f3azllbjiilxfds3cpbcrfsi07l8lf4mxx"; depends=[AnnotationDbi org_Mm_eg_db]; }; mi16cod_db = derive2 { name="mi16cod.db"; version="3.4.0"; sha256="1v64plvn173hdvjyy491qh2wd4mgbpwr27iq7lab9b3w1g3b1a82"; depends=[AnnotationDbi org_Mm_eg_db]; }; + miRBaseVersions_db = derive2 { name="miRBaseVersions.db"; version="0.99.5"; sha256="0cxkxy42ybnls6396m4svm4iiw0x29fgg98dfwpgwfv5np85m0vh"; depends=[AnnotationDbi DBI gtools RSQLite]; }; miRNAtap_db = derive2 { name="miRNAtap.db"; version="0.99.7"; sha256="0h7s83cqr8xwypizdhkgx4nl4pxbr3lhnjwgnwcdibrpq3mbq5cj"; depends=[AnnotationDbi DBI miRNAtap RSQLite]; }; mirbase_db = derive2 { name="mirbase.db"; version="1.2.0"; sha256="0l7ah1ia7q1h16av2v1qa9nqpr0604z5dlrq37kd0aiz8dcxyddk"; depends=[AnnotationDbi]; }; mirna102xgaincdf = derive2 { name="mirna102xgaincdf"; version="2.18.0"; sha256="03q71dq6b0plivj5bgpgx0pnqdwfgplakyk5ggj4w7kqwmr5k17i"; depends=[AnnotationDbi]; }; @@ -544,10 +566,10 @@ in with self; { mirna10probe = derive2 { name="mirna10probe"; version="2.18.0"; sha256="0f6jfzmj9h4g60lnkdi65grl3ncn19qnrwcxsdhqgiw3ll19cbj7"; depends=[AnnotationDbi]; }; mirna20cdf = derive2 { name="mirna20cdf"; version="2.18.0"; sha256="05yvi7jibj8fiak7z03gjv07xagpda3gy19namyy4iiq3w7ya2fj"; depends=[AnnotationDbi]; }; mm24kresogen_db = derive2 { name="mm24kresogen.db"; version="2.5.0"; sha256="0kf9cilhfpfl9cws1b08ic11fnqscdvbja4m16sm4xjyfd2kskfp"; depends=[AnnotationDbi org_Mm_eg_db]; }; - moe430a_db = derive2 { name="moe430a.db"; version="3.2.2"; sha256="14yfpv2ilpw1g4yq1y4bl35x61ldz3lb7m2g95a56fs4cn3149pn"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moe430a_db = derive2 { name="moe430a.db"; version="3.2.3"; sha256="1j9ss80ndy4z3r7cszdkxsadhwj3avxrfp198kg156gsylcskpjn"; depends=[AnnotationDbi org_Mm_eg_db]; }; moe430acdf = derive2 { name="moe430acdf"; version="2.18.0"; sha256="0n4dc2racw68nmfz6arl7f0yh9f3mlkvilsl694zrxw2ysbq1d70"; depends=[AnnotationDbi]; }; moe430aprobe = derive2 { name="moe430aprobe"; version="2.18.0"; sha256="1paiwgjzlq4c04wy8fpnnxj7n5asiw6z2mz0rjrifja9lgyilq50"; depends=[AnnotationDbi]; }; - moe430b_db = derive2 { name="moe430b.db"; version="3.2.2"; sha256="03wdfg0n66p8q0g1y75zs8aw3gyi756c1ghcw1d4i49qa8h986bq"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moe430b_db = derive2 { name="moe430b.db"; version="3.2.3"; sha256="0hb6pa07j5hdirpprcm9vdszbh5bkgf38gyp3g0gqvlc32nklv58"; depends=[AnnotationDbi org_Mm_eg_db]; }; moe430bcdf = derive2 { name="moe430bcdf"; version="2.18.0"; sha256="0yl5pkqj37188k2yvvsqhnhm2vx523r11sry976bwzcadlicfhvb"; depends=[AnnotationDbi]; }; moe430bprobe = derive2 { name="moe430bprobe"; version="2.18.0"; sha256="1nziw3pj4picz0aazblpqkbw82wq3vdajh9i78yfvlz1bwb2vpfi"; depends=[AnnotationDbi]; }; moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.4.0"; sha256="0f7xxq0n5c5cp9axaxjmi9dhqfznjiifj98yxz1cgzkihgw7fwry"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -563,30 +585,30 @@ in with self; { mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.4.0"; sha256="0sbms5rld5x53cjk5yaxl9j37kni37j9drar4a1b94s6cxsh0ydf"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.4.0"; sha256="1nbvq5v114ziqjiijxjji703c30h8fv7f1qvzj1bgr5cssv60bbl"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.4.0"; sha256="111b5pvq4l25wghys2ba9f1g8n5d4y8dqvzi7iivdx17jy61jqm7"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.2.4"; sha256="0d0fnn7x9y479sglnjdc0kd5ldv8bgq3d9dd2qy7cw67z1dn7wsv"; depends=[AnnotationDbi]; }; - mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.2"; sha256="0xyzawc9ngwp1z9yzqybq4ywwyngk0c0blkkf5s40jypd77w79pq"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.3.0"; sha256="13vm1zi33glpkc0sl166gni542825f1pnbj2qqh5yqlp6i00whxf"; depends=[AnnotationDbi]; }; + mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; mouse4302probe = derive2 { name="mouse4302probe"; version="2.18.0"; sha256="11mn9j98m3xfk5sn9cb2r92zckm6acplc66c5xn44nazf29pf9n1"; depends=[AnnotationDbi]; }; - mouse430a2_db = derive2 { name="mouse430a2.db"; version="3.2.2"; sha256="05mi6gxf4pzvl4rcdfxndykzx3563wq4kadhwc5k4zw9g34fllvm"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mouse430a2_db = derive2 { name="mouse430a2.db"; version="3.2.3"; sha256="15ikbwb4sv1nlc1is6zx959wamha0v7k21gdkmfjarjq3g0ydng8"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse430a2cdf = derive2 { name="mouse430a2cdf"; version="2.18.0"; sha256="0530znylp4xqld8kak84d6lnc8r62p413d4kkn4j99kmmvx3l9rn"; depends=[AnnotationDbi]; }; mouse430a2frmavecs = derive2 { name="mouse430a2frmavecs"; version="1.3.0"; sha256="0bb9fqz4kkw78dw9mbkn1pp6wp7lmyqpcg8gdjg9j9aichbqbnh8"; depends=[]; }; mouse430a2probe = derive2 { name="mouse430a2probe"; version="2.18.0"; sha256="1f7a6mvcpv57h7kfj1qzkcwh7mdl2w9z6ysmrgan9037rd0652sz"; depends=[AnnotationDbi]; }; mouseCHRLOC = derive2 { name="mouseCHRLOC"; version="2.1.6"; sha256="0xylgnz43xmjnqdwv7pn034wfs61va21lvcpn9igdik2s42ykpp2"; depends=[]; }; - mpedbarray_db = derive2 { name="mpedbarray.db"; version="3.2.2"; sha256="085cg6ap0j7inx5f1vzprlddhpv173sx8886b81fjlx2gq2f440q"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mpedbarray_db = derive2 { name="mpedbarray.db"; version="3.2.3"; sha256="04pwchivzb19awnnqr9an0nl49rgdva58ip1fkgbavp3vlirxv4i"; depends=[AnnotationDbi org_Mm_eg_db]; }; mta10stprobeset_db = derive2 { name="mta10stprobeset.db"; version="8.4.0"; sha256="1chc4ld5g8dmy33vrvprx08yp2vasmr4x6m8bswhfyigzf6n3d6w"; depends=[AnnotationDbi org_Mm_eg_db]; }; mta10sttranscriptcluster_db = derive2 { name="mta10sttranscriptcluster.db"; version="8.4.0"; sha256="0f890nbnc27hnfazdyyypb3k6sla1ipijb8fvfqfld40nm1is978"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.2.2"; sha256="129zyknqp60whd6g5z85vknjx1h9rv1mdiwbr63rmb2blwcqnl64"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.2.3"; sha256="188ld7awcgrbqxkwqyr98739x4ihmcawv3lv2ybrc0khqifylzj3"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksubacdf = derive2 { name="mu11ksubacdf"; version="2.18.0"; sha256="09xm3ah3zlssclblx663rlwrnmx3niabd5nf7zf7krhbpgcwhyim"; depends=[AnnotationDbi]; }; mu11ksubaprobe = derive2 { name="mu11ksubaprobe"; version="2.18.0"; sha256="1p3kc06h83ivh06a8qqcbpgbsbdfp9nnwvqfxr6d1gdn15qcp96k"; depends=[AnnotationDbi]; }; - mu11ksubb_db = derive2 { name="mu11ksubb.db"; version="3.2.2"; sha256="0dvajwxbna4q7jd7frrfwnj34mx3gz26b1fkv7a55adsgicfjsad"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu11ksubb_db = derive2 { name="mu11ksubb.db"; version="3.2.3"; sha256="1ld2nbxxaz0vnq2gj1sv0qbgcrjg9959885y3l2wciszrs5nx3r2"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksubbcdf = derive2 { name="mu11ksubbcdf"; version="2.18.0"; sha256="1dajsq041pg3g9c5j3sd0w6gypqpdva91rb4a7ni990nk45mg23k"; depends=[AnnotationDbi]; }; mu11ksubbprobe = derive2 { name="mu11ksubbprobe"; version="2.18.0"; sha256="139kbrlxlw0r4z2iyy4qqcc70sb6nmsn0h7v33k5j6r52qz4hjxh"; depends=[AnnotationDbi]; }; - mu19ksuba_db = derive2 { name="mu19ksuba.db"; version="3.2.2"; sha256="1j2j5hdbhzmys464i35xxws0kkl5fz6ppl8c8win03a8wbkxvadx"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksuba_db = derive2 { name="mu19ksuba.db"; version="3.2.3"; sha256="1vivbv7ng58n1r2g5w5xrwml9jvfhb4v6qp9n4hi9y77526hm6sq"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubacdf = derive2 { name="mu19ksubacdf"; version="2.18.0"; sha256="0c1nhvnnn8v07m6rci2cml6i86rs77b1xnw7jmyndfl458vjlp09"; depends=[AnnotationDbi]; }; - mu19ksubb_db = derive2 { name="mu19ksubb.db"; version="3.2.2"; sha256="1l4ayfl6y3d3nsdnp05kzm3f0fqaa92ayvnnp0wd1idnp5r02dq5"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksubb_db = derive2 { name="mu19ksubb.db"; version="3.2.3"; sha256="1p5x8gl17nhynwm96ah20rpbj21n8l856bivy5slyn795vzy15sw"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubbcdf = derive2 { name="mu19ksubbcdf"; version="2.18.0"; sha256="1waizab2dn74y8b1w27l1yg29gi00v16fij1jm2yhik5cnjhhhk4"; depends=[AnnotationDbi]; }; - mu19ksubc_db = derive2 { name="mu19ksubc.db"; version="3.2.2"; sha256="1fsmkx29vki1g9jcd1hvjil90dhsl5yrxslil4z7xwlvcbzxsjp9"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksubc_db = derive2 { name="mu19ksubc.db"; version="3.2.3"; sha256="087ib49c61q2yrpqdhkgzcjmrv88wdwzzws67anx8bia97ck9zhz"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubccdf = derive2 { name="mu19ksubccdf"; version="2.18.0"; sha256="063v3fn06p1znwrdxn26lz7qz9sfzk10hgabimxw3rz5x0580d4l"; depends=[AnnotationDbi]; }; mu6500subacdf = derive2 { name="mu6500subacdf"; version="2.18.0"; sha256="15y7x1jgzzc366dapa5gy44m98zpn8mfghjxh12k3k9ryd59lxn9"; depends=[AnnotationDbi]; }; mu6500subbcdf = derive2 { name="mu6500subbcdf"; version="2.18.0"; sha256="0a0w5yldgjvj8pyw7ygn685pj95qdfm34c0sqvgqf7w7g5wm4jvk"; depends=[AnnotationDbi]; }; @@ -600,28 +622,28 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.2.3"; sha256="1zsh3bhnfczihl1bdn7f67bnyf0nm5fbxqxnk34wr4a6c09sb7v3"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.2.3"; sha256="15im5iv1ba5aqya4r6xjji1yvavklia5m6vam15vi5wniqmmjdr3"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.2.3"; sha256="0q0lhhx3ffzn32k34bwn4sq7ssjrbszjz5d0nyvw3jqn50fiqs6n"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.2.3"; sha256="1d0lx00ybq34yqs6mziaa0lrh77xm0ggsmi76g6k95f77gi7m1sw"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.2.3"; sha256="0a4aiwj1vxjciqqdyc7zmkzk2yxfrp6450hpv8qigb8k3y2l26in"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.2.3"; sha256="0mib46c7nr00l7mh290n383za9hyl91a1dc6jhjbk884jmxaxyz6"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.2.3"; sha256="18l8nh6lhprv5l1z3f5nrn6ilbpairmhq5vzql5jp1hs3b3vdnz5"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.2.3"; sha256="1h11402sg4whsp6xv6ys7yfllhddd1k9cq3q6kgs0c9qr69yx67p"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.2.3"; sha256="0bdg5k7j8lmr2pqkiz83w5ckk4vddk9kqjlfq0w5igfs6ilr5d4a"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.2.3"; sha256="1bfhksa7vrdfxqq2yl7a2hsg37qzj8vmaaf1g7vxjk89r3ib6fmq"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.2.3"; sha256="0xicgkbh6xkvs74s1piafqac63dyz2ycdyil4pj4ghhxx2sabm6p"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.3.0"; sha256="0fsjivcmwdfhvq45dikfgpni7725snncrv33pbird09hwy6n10vc"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.3.0"; sha256="1fhv5kvwwjfgnrrynala7bnjv0sxzr9isp32vhgx0gazl5krzyh7"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.3.0"; sha256="0sl6kxkdisss5y0c50n9f3ccbbk4kdwj1afkkqr3aay75fzm78hs"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.3.0"; sha256="17mvb2ci2jgac3zi420cbf70n4zswqinzxlk1v2fjnp8vvydl2fw"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.3.0"; sha256="1d5ip9d0236kp6i7z2wy6xgfb1nf0sjc8qyggjfan6pb2lsx2m2y"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.3.0"; sha256="15kzvw78xwa54yk1d69l6pmgny4726ydpdkk8lic26vr0yiwicla"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.3.0"; sha256="1823101yjvyc8x4gbmz7bijm2s5bd0fz4nv62glmaczlfc4lcwp9"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.3.0"; sha256="0hjffgii1pxmri7razxpilsk7scbdm8ingfwbgn6g51lyd5ygbj3"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.3.0"; sha256="15pn6kdbx2pf07dfq4knxbx3s7hf8zyip1c8hfmnvs5ixajivgxz"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.3.0"; sha256="0my3kjhfvzv6zwdaina7qcl7riqy2rj2z2v6x477plwbscixb9p7"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.3.0"; sha256="09zb43yjd82ny210n5a0wsrji4w56l2r6ana6d9lx0nn9mzd7rzp"; depends=[AnnotationDbi]; }; org_Hs_ipi_db = derive2 { name="org.Hs.ipi.db"; version="1.3.0"; sha256="06nkcjcavzwgnxzmbj05i4dapszf2wq7m5s0g8d6hm7kxz5wxddy"; depends=[AnnotationDbi PAnnBuilder]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.2.3"; sha256="0wh1pm3npdg7070875kfgiid3bqkz3q7rq6snhk6bxfvph00298y"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.2.3"; sha256="037ihry1dly6cb3fhrlfsmcdma6ia6wl9b39c27ayibp9ga6ps0a"; depends=[AnnotationDbi]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.2.3"; sha256="1m0adzg66a9rf0m5xf07hzjil0avindaq3wam233gsxwmj91462k"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.2.3"; sha256="09yf36k3xbzj59c4difik2gkzsxl2rql42g5f1y239j6bigh9mga"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.2.3"; sha256="1vd6dzz1h6y0znbnxc8ifk929qinr81cglrqbg607xmz87lz1r7i"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.2.3"; sha256="0cdfbz8qb19rmvzp8lm835waijvwlp7b8dgwkd34diqx4pad4y6f"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.3.0"; sha256="0r939vfmsqqdwfimix1nv0bkhnixawy9c6avbclrncfanw3kgjax"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.3.0"; sha256="0awqg374j99j5g8z2am3cy0p92y68rsxss5b9by7mblxra4sy7gm"; depends=[AnnotationDbi]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.3.0"; sha256="0xydp19vacycxwkfc1r5z1sbhhmmg5kzv25jqrnm47lbvdsbzbnq"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.3.0"; sha256="1d0rrcpq3md5lavl3c9ypcbrg19l69p8abcxlzbqyn4rims6hsbp"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.3.0"; sha256="1d89gafdk0hra7c0rmkkbydvp23ayam186ydjcwydvpms4lpjssb"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.3.0"; sha256="1n251ds1gikv9ksgzy9a0j1z21kf18zj8q5b19zc0lh2pvgghhfh"; depends=[AnnotationDbi]; }; org_Sco_eg_db = derive2 { name="org.Sco.eg.db"; version="2.4.2"; sha256="1ppjl55059gk9jbh8c8xbsn2jlqz1hm650vm9gxnbd8hpnk63vgz"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.2.3"; sha256="0n2id4g5ikwlsr2c8qrdv5gmnjycyp40zgwg2xh9ml9ahpzx957s"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.3.0"; sha256="1fcskfrq0r4iq4nv2rnpl6sb5xi53qqihnm1cjnfi00mgc767xw1"; depends=[AnnotationDbi]; }; org_Tgondii_eg_db = derive2 { name="org.Tgondii.eg.db"; version="1.0"; sha256="1vq3qbk6jswfffj5lfwsic71h8ga7a6gqf6wfa7qcda3gvfhnwlc"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.2.3"; sha256="1l7i0wv89bd6f4var4qakjxz4frnrzm88frjcfac3kba98196pva"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.3.0"; sha256="16k3c5ym289hsrg7qvsdz8l7saisyrf096d5nrxd92jw1ilzj31q"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -786,26 +808,26 @@ in with self; { pd_zebgene_1_0_st = derive2 { name="pd.zebgene.1.0.st"; version="3.12.0"; sha256="1vywph8shn23k0s8jmvx34rj34y1zxgwcssjnzbipm71f2sa15hw"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pd_zebgene_1_1_st = derive2 { name="pd.zebgene.1.1.st"; version="3.12.0"; sha256="0xs3kx7l78dfqkasgz8n5s8qjia5qhdcnj1l8al0ivy8mwvlpyxs"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pd_zebrafish = derive2 { name="pd.zebrafish"; version="3.12.0"; sha256="0gg7y7w51pv0vf39qzyaf09wl3vxy222nr69zgxg7cylwxmaky7v"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pedbarrayv10_db = derive2 { name="pedbarrayv10.db"; version="3.2.2"; sha256="1rvzg08d6b04d21hx4xsa3qdgdp7xndkkyi3yd7k8ilanpidi8jb"; depends=[AnnotationDbi org_Hs_eg_db]; }; - pedbarrayv9_db = derive2 { name="pedbarrayv9.db"; version="3.2.2"; sha256="1f8p1zapw74afch0bmn7j96296d88qwxx6p0qa1xf7ir8q92fl3x"; depends=[AnnotationDbi org_Hs_eg_db]; }; - phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.2.0"; sha256="07hpsghl8j4xs3601vd6vf1a1v1q5dn35kmih424cxwh1vhb5yyb"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.2.0"; sha256="14isvvv22y040qj3lbal0vf15l0k7c1r7jql27rl98f4n11hl1pc"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.2.0"; sha256="0vpally7hwh7snqcz005g9z0iabi545cqg8bgrg9970w29j4xrgk"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.2.3"; sha256="0kn1l48pwfc2bgmxck90fq9n2dayjzmdsj6rz44q02a4c5c2m6kz"; depends=[AnnotationDbi]; }; + pedbarrayv10_db = derive2 { name="pedbarrayv10.db"; version="3.2.3"; sha256="01sn7qh5r2c2ph7gqirlzlplxscsmczf7ajffd9rsx59932f71kx"; depends=[AnnotationDbi org_Hs_eg_db]; }; + pedbarrayv9_db = derive2 { name="pedbarrayv9.db"; version="3.2.3"; sha256="0x9m9m4nmdhc0j5244avmlfwljcpw0sh44l1b00cx05swi3vmjlp"; depends=[AnnotationDbi org_Hs_eg_db]; }; + phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.3.0"; sha256="1mdwkd75ljmshyprg5ns9880ck9hrq7015s413sp64d2fxj206z5"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; + phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.3.0"; sha256="1f5nq7chb5k5ahgwbjl0d67c382hvn50g0yz56l4ny1gwbgyamk7"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; + phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.3.0"; sha256="035zap0igcfvrncq7pc1y6f9whnik0izchqjidf6z0cdyhv3h088"; depends=[BSgenome GenomicRanges IRanges VariantFiltering]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.3.0"; sha256="00lk4i3cvq3z14fxkyj393aa8sq70c9icd2srwkpgxhw51w8l3wz"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; poplarprobe = derive2 { name="poplarprobe"; version="2.18.0"; sha256="1pi6lhkk3lr49qs0yfpxm80nm1zqn4syykydymah2208r6qnkgv2"; depends=[AnnotationDbi]; }; - porcine_db = derive2 { name="porcine.db"; version="3.2.2"; sha256="1xbgvzhywv504xyd2kciixrcg9dr6c99czxclf0rwwl7dwyadwr1"; depends=[AnnotationDbi org_Ss_eg_db]; }; + porcine_db = derive2 { name="porcine.db"; version="3.2.3"; sha256="0xp86g0sp4jj2shjzvwg64fpp381lkjm0p5y3zwalznnrq6xl3hk"; depends=[AnnotationDbi org_Ss_eg_db]; }; porcinecdf = derive2 { name="porcinecdf"; version="2.18.0"; sha256="1ywbgh5nk3bba0mhmbbmvry0j9m9vk7qmsacl5nx1cjd7kp68csv"; depends=[AnnotationDbi]; }; porcineprobe = derive2 { name="porcineprobe"; version="2.18.0"; sha256="16q865wjrfcm5ffqwjdk762yq1ixa93jlvfg7xbhsvajvvw5dxdy"; depends=[AnnotationDbi]; }; primeviewcdf = derive2 { name="primeviewcdf"; version="2.18.0"; sha256="0qj3l2iabpl2d79pr258cbqar4hdpjkbwf829bnwrmabkaq92z48"; depends=[AnnotationDbi]; }; primeviewprobe = derive2 { name="primeviewprobe"; version="2.18.0"; sha256="0kw04789ihxnw874qcdj5ypwj6npya2v3p893ahjwhys5wrivmqg"; depends=[AnnotationDbi]; }; r10kcod_db = derive2 { name="r10kcod.db"; version="3.4.0"; sha256="073b5fb8dcqp5iq3h6p6250l91z6bzg72nzl7qva3jin33v96nmm"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rae230a_db = derive2 { name="rae230a.db"; version="3.2.2"; sha256="095d2jf1g89855y7fmv6v8fpwk6gir2b1v5s7sj4xdry8ax67l0v"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rae230a_db = derive2 { name="rae230a.db"; version="3.2.3"; sha256="1b2vj2dsihnj1h867z9biyxb3ai3lv47bhadim1z1gcyizkbll4x"; depends=[AnnotationDbi org_Rn_eg_db]; }; rae230acdf = derive2 { name="rae230acdf"; version="2.18.0"; sha256="1f62gw18mhmrm4sqc3kazsm5zd4m73f99xzxbakqhvr5sbdqh28k"; depends=[AnnotationDbi]; }; rae230aprobe = derive2 { name="rae230aprobe"; version="2.18.0"; sha256="0gkpaa53znqsmi3366wfmqz6q3d1cq3ymag09gkpdmssrp1rh9qh"; depends=[AnnotationDbi]; }; - rae230b_db = derive2 { name="rae230b.db"; version="3.2.2"; sha256="07nb27lhwabdh3yxirpnvgvym6wqal40xi105nmn5y6mr5a1q2yg"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rae230b_db = derive2 { name="rae230b.db"; version="3.2.3"; sha256="0rjs9lijabhxfrs6m9qri7a1c10zm1mxqx7bbip366cw069f5dx4"; depends=[AnnotationDbi org_Rn_eg_db]; }; rae230bcdf = derive2 { name="rae230bcdf"; version="2.18.0"; sha256="1j2i49cp042nk3rkf8q6gxcnwd5cihz1nyg8r6yndkja51r41pi8"; depends=[AnnotationDbi]; }; rae230bprobe = derive2 { name="rae230bprobe"; version="2.18.0"; sha256="1smqs93fks4rd5g9kk7cacnpsnj4rjr0d6fl2i01mdiihfi3csny"; depends=[AnnotationDbi]; }; raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.4.0"; sha256="004h4z10x84w9bk71y1a22r51hh52xhpvdr1flr6crgxvhh0icis"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -820,37 +842,37 @@ in with self; { ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.4.0"; sha256="18v7f7i6r9byq5sjr9pxshqmbr6p2iym3gv95lqqfg4qlgiri991"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.4.0"; sha256="0qfhb9fpydfh9n0d41pky46zsjabg7cpmyg6m59v529s22xw1mhw"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.4.0"; sha256="04cm1248iphl4n7avjr29ac44kgvhj8fkwxvb5wsyrjdfs15swmm"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.2.4"; sha256="1yxamdcfgj0imjbj54hvwjyz0s5739654qf9c934ykrkfmfacrl0"; depends=[AnnotationDbi]; }; - rat2302_db = derive2 { name="rat2302.db"; version="3.2.2"; sha256="1m9kn3lx1kydglk503ila814v9rrd2sphhhyqdvw9cp4jd4d22c0"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.3.0"; sha256="1dsb56lldvq8a75ryx7b1wvzaw9w8x0b1kjsnhd8jh2qj2rai2d5"; depends=[AnnotationDbi]; }; + rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; }; ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.54.1"; sha256="0nqv0yyhlnkn75zrj5chpmxcf2ak3bddffjkfwnm740hr7cn0491"; depends=[AnnotationDbi]; }; - rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.2"; sha256="03p2qfg1bxpc6hd3g3j4hpndcb89id8ygkkn3za4gbbc4xql6543"; depends=[AnnotationDbi org_Rn_eg_db]; }; + reactome_db = derive2 { name="reactome.db"; version="1.55.0"; sha256="1q3cikzvbywzcrihnw5hizb8fylf1mfbwyrlyxcnw5hb522f5x8n"; depends=[AnnotationDbi]; }; + rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; - rgu34b_db = derive2 { name="rgu34b.db"; version="3.2.2"; sha256="1gckh80vjabrhwxnzqxr885z6jzmpmvd1lqpa430b6nmjffgq0fn"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgu34b_db = derive2 { name="rgu34b.db"; version="3.2.3"; sha256="1dpk9dyicqc8d4fypqcq2z4plq6iabd0g8f3bfvkp9qip3bi9np8"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34bcdf = derive2 { name="rgu34bcdf"; version="2.18.0"; sha256="1iw0jydcjizkxybpbimcc9m8rjl4xm3jx431nvr28h14948jhrg3"; depends=[AnnotationDbi]; }; rgu34bprobe = derive2 { name="rgu34bprobe"; version="2.18.0"; sha256="097q0994fbn05b6iprncynpka9zm9ayh1pmjya44lj4ahfmflgiq"; depends=[AnnotationDbi]; }; - rgu34c_db = derive2 { name="rgu34c.db"; version="3.2.2"; sha256="0rhiqkgpr5fkjndbqgibrg8kcxxav0ijz3cfd1gflk0530q816sk"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgu34c_db = derive2 { name="rgu34c.db"; version="3.2.3"; sha256="0bc4b799hxxp108rkfr12c0v49vkfgq5p9hxk48p5a5b9h42g6s8"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34ccdf = derive2 { name="rgu34ccdf"; version="2.18.0"; sha256="0v6glasybwg73synvlq6rf3fw4wckavp09waf3g3hya4qzy45r1x"; depends=[AnnotationDbi]; }; rgu34cprobe = derive2 { name="rgu34cprobe"; version="2.18.0"; sha256="00v9hbq5vc6ah4gws196isglicxj1dpzp1a0vv4pkl2ph59hkf1q"; depends=[AnnotationDbi]; }; - rguatlas4k_db = derive2 { name="rguatlas4k.db"; version="3.2.2"; sha256="02a3y3ysi7v9jlv2h22yj2lqy96x9szrliz0bvs5zz12jmmkv4rg"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.2"; sha256="0kxlhh14v8ygscxaym56302fpnl91ski5hzrdz2cinsp71p9zm08"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.2"; sha256="0z0cf5an7c6m5prkssyc5jsxxmsljpn71wgf2z54gdl8k5nq7gli"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.2"; sha256="0fhq9wmq9r5h4hzv0d33xc6ld6grcmngvydnr3lm325x97fpyfjc"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.2.3"; sha256="0qfnhvn6v3ip6y10jcb7xnsv8v9y2madrynaga0giqxghdj87rki"; depends=[AnnotationDbi]; }; + rguatlas4k_db = derive2 { name="rguatlas4k.db"; version="3.2.3"; sha256="0q8xryvqixqbfqc9lfkmy9zymdlyk76vy4l3a74haj7k1m72nhi2"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.3.0"; sha256="0xq7bvargvwv06xzalshw7iz75incm6cz58w7h7hg66avyvrxyc9"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; ricecdf = derive2 { name="ricecdf"; version="2.18.0"; sha256="07lsw9rklk2rsvbkcj1ci8hg2x68k3qpkx9yw0cmd7rg5fvydgns"; depends=[AnnotationDbi]; }; riceprobe = derive2 { name="riceprobe"; version="2.18.0"; sha256="0w6qvszdmnipn3v2bld46x7my2a9hni0jbxd0y1d6xcrrgs951ra"; depends=[AnnotationDbi]; }; - rnu34_db = derive2 { name="rnu34.db"; version="3.2.2"; sha256="1mhnazgbczf9bkdx20hyyfzk5kc4a71g4i9b7b5rcw99jpaabs3b"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rnu34_db = derive2 { name="rnu34.db"; version="3.2.3"; sha256="0ahridq75rmjyaivmlhn428wg712zv3003cbzzrajm9w6nibbfgk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rnu34cdf = derive2 { name="rnu34cdf"; version="2.18.0"; sha256="1snb89530zxdbsfs1vgw30b1wdc5sdr1q46bmvz5m9g57gyficr0"; depends=[AnnotationDbi]; }; rnu34probe = derive2 { name="rnu34probe"; version="2.18.0"; sha256="1rzjha1v453fxiwqs2zgwcbrvz6w96biz2jny0hrh5s86d5f6xpb"; depends=[AnnotationDbi]; }; - rtu34_db = derive2 { name="rtu34.db"; version="3.2.2"; sha256="16kf4h4dfhjk0m8ks3r76j9ca6qinzh2sh6258ba887gdy63rd78"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rtu34_db = derive2 { name="rtu34.db"; version="3.2.3"; sha256="119l36gbzdi52na2lkjbpb5r2d9pp5rz2zpzfj7isw07an6h8wmh"; depends=[AnnotationDbi org_Rn_eg_db]; }; rtu34cdf = derive2 { name="rtu34cdf"; version="2.18.0"; sha256="10f5wnvk820c8brl2qqs7mv6jcn1v6pmz680kvlpyz9s2sz16936"; depends=[AnnotationDbi]; }; rtu34probe = derive2 { name="rtu34probe"; version="2.18.0"; sha256="0mcp9lmc65j3ds73gyak72pkshnx6km0d2cm324yaxlp9bqzfchw"; depends=[AnnotationDbi]; }; rwgcod_db = derive2 { name="rwgcod.db"; version="3.4.0"; sha256="1k0fpnv314lx2jf3mm6xfqa3jx353sp42awxqys9byzhg9zyj2j3"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -869,18 +891,18 @@ in with self; { tomatocdf = derive2 { name="tomatocdf"; version="2.18.0"; sha256="1ldq5pxzh2vms5nbhn3aiy55hx2x3zbzy9wlbf2v2wczwlzbiinm"; depends=[AnnotationDbi]; }; tomatoprobe = derive2 { name="tomatoprobe"; version="2.18.0"; sha256="1aj8zmpla9b9p7pj0qnp2jqrj7azp1nmfvjcbka5ns5vrnvfpf92"; depends=[AnnotationDbi]; }; u133aaofav2cdf = derive2 { name="u133aaofav2cdf"; version="2.18.0"; sha256="052hs4lwllq0p0fsx5d1ixqhrdl889k14z10kahpsjn60746qarm"; depends=[AnnotationDbi]; }; - u133x3p_db = derive2 { name="u133x3p.db"; version="3.2.2"; sha256="0inmx2ssi7iafgf5smhszplrq1d149vcd9ddpfqy14q84fpxm6yc"; depends=[AnnotationDbi org_Hs_eg_db]; }; + u133x3p_db = derive2 { name="u133x3p.db"; version="3.2.3"; sha256="17wq16zhmpjpyxfhwr57kx61b4i87jkzza8qkqmcd6kcrhqkj92y"; depends=[AnnotationDbi org_Hs_eg_db]; }; u133x3pcdf = derive2 { name="u133x3pcdf"; version="2.18.0"; sha256="05bdb5bz1ffv7dhbzn0s5ybygah72zvhz8zcj8bn9dg0k40yqsrb"; depends=[AnnotationDbi]; }; u133x3pprobe = derive2 { name="u133x3pprobe"; version="2.18.0"; sha256="0xzm6dkf78mp1yhdl3w0hg36saxgb4sxnq0dsvzjmfaca74ir2qy"; depends=[AnnotationDbi]; }; vitisviniferacdf = derive2 { name="vitisviniferacdf"; version="2.18.0"; sha256="027nn1fr5zixnlikw4pi704kdfrfm388j5qr30y9bsky445fn7g4"; depends=[AnnotationDbi]; }; vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.2.3"; sha256="1wq82jvax97w1aqr6la9arzrqw81jwkvzj2fmq5fj6l9bkizh5a4"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.2.3"; sha256="061nkbc90xa1hy26alshihs3gvl9qwqmfv05kc8gci9c15wp7k7k"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.3.0"; sha256="00g3cq605zgzq11lrc8fyp5qyqds1rwq3qzbpg82ja29ggbnkr6f"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.3.0"; sha256="1bxz80rg1kf9hawmbrawiswz8r8yb29ck7l8wwivi4n5cg3mfbkw"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; - xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.2"; sha256="0pak2v29wf0lns8n8nx04p15vcs351vr1sr0arybffp15maw3lya"; depends=[AnnotationDbi org_Xl_eg_db]; }; + xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; xlaevis2cdf = derive2 { name="xlaevis2cdf"; version="2.18.0"; sha256="1w7f6z5f0mfgblfjy840dxj3y1l9zz8fp4s8q6zd580nwaa50g78"; depends=[AnnotationDbi]; }; xlaevis2probe = derive2 { name="xlaevis2probe"; version="2.18.0"; sha256="0vrhbzi3myh10v7r5a6jqiinllns3n40nxs097px7g80x8ajkmb2"; depends=[AnnotationDbi]; }; xtropicaliscdf = derive2 { name="xtropicaliscdf"; version="2.18.0"; sha256="03plnc0dya0dgmvay3hyw5yi91ris6gl643chmjil7p8vn9lb5as"; depends=[AnnotationDbi]; }; @@ -889,16 +911,16 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.2.4"; sha256="1y1p2987w480nr2mdvkyag8ixhxf15y5h5awk69kpq5qvpd73q2y"; depends=[AnnotationDbi]; }; - yeast2_db = derive2 { name="yeast2.db"; version="3.2.2"; sha256="0wgfpnsc8mpizag8x2mpyf0hj00k3fwsfz6nws7fnrndqhc47ixb"; depends=[AnnotationDbi org_Sc_sgd_db]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.3.0"; sha256="0dpdqn22m5l78ck5shwpiw4qza63sddckzdq85fx4xskmnr0qhr2"; depends=[AnnotationDbi]; }; + yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; - ygs98_db = derive2 { name="ygs98.db"; version="3.2.2"; sha256="07qkrv7c17h0h851402pf7rvlf00izm8f3s5bjpyagnjpzbxxyd4"; depends=[AnnotationDbi org_Sc_sgd_db]; }; + ygs98_db = derive2 { name="ygs98.db"; version="3.2.3"; sha256="0py1xpqxsfvxk20knn4lj872mxw1ysqk2nvgsbh5l2rh1m2p8rdk"; depends=[AnnotationDbi org_Sc_sgd_db]; }; ygs98cdf = derive2 { name="ygs98cdf"; version="2.18.0"; sha256="0j04biahbm2l31aayddp0z9rh3jq1ydxf3h8pxr3pvq2vjj1q2mh"; depends=[AnnotationDbi]; }; ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; - zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.2"; sha256="1hx6x2ninchkyw4gmw4frzs0j7zj8lbh880q6wvvzf76a414lka2"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.2.4"; sha256="0y5i2rb5vskpal3kchk8c5wywynvaz9dacb9hggk03qkrbpz03bn"; depends=[AnnotationDbi]; }; + zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.3.0"; sha256="1x0pzppwlm2ad8b2amg3i4jcpkadr2x26nqdhjqyjag0kq5w72zl"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; } diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index 4ae4806a683..93fc5a95482 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,263 +4,299 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.2"; }; +let derive2 = derive { rVersion = "3.3"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.0.0"; sha256="1p2q03c87ilwfz7gbypkfi0n3m9m3c4z6ci9b5v4pr46q4ppl7s9"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.12.0"; sha256="1k4sx1ras9g9zbx34r5nxyrik5c5jzb4b1zxf4551q5xfy97w354"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.10.0"; sha256="0c1ma3lzh1dvmz7h1pw0r9vvq9y0xmc1hjm0lwr3ql509lim82aw"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.6.0"; sha256="1bn41pmk7mfdncjnd103spfdcxrwz5jgdycb37kgq1hk36qzw3mj"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.6.0"; sha256="03gb68gw3q6aig3r510h9rwlhj4g40n1dsic2iyj5cs9fmj6gfq1"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.4.0"; sha256="1bzc53gcazsl3958nnq3igy4xrd693gl9gsrz48zaj47gwij2la0"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.8.0"; sha256="0cm5giv12p3cx3z0ync7pgj309n4xy630y9wr70pb7n9kr0f5gjf"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.8.0"; sha256="1cag2mc81qcqx8gwlg4xyvm4a6qayjajwdna8mcwki42gjdl15x4"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.8.0"; sha256="0ajxf81y3w6r60gj6ybkzqn7qcqrwch1s10nd2jcv7ki4w6vw6kb"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.10.0"; sha256="1xpkdllg9a86pc4fjfiv9a0n8mbiaxyz3ra40v9drwh29skkfpm2"; depends=[affy]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.0.0"; sha256="1jz69nxilwcs9h7hj366dl20fxlblrgvplnjjr091r5jy3a43cvj"; depends=[]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.8.0"; sha256="0vszzx44sppd0gka884fm53al9ljpjl4rrzq7li4w23ndf8sf5ak"; depends=[beadarray GEOquery limma]; }; - CCl4 = derive2 { name="CCl4"; version="1.8.0"; sha256="0wmkkvxb2k0x921djf7x08svkm6lxfy00053ba572zk9rgb1pzqf"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.10.0"; sha256="1r9iv4m993nz7rj6z23pclgd4c8j75d5raq2518vjkp1a4prhj4s"; depends=[affy Biobase]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.6.0"; sha256="0dayg8p92ma2bwjn4c342q03z1cmb8xyazr4c8y8pzddrydwaizv"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.6.0"; sha256="045fh1g0m6z47q5smc2x7q3adfxs50fa3ph0k9b3qrkrzfq4dpcb"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.6.0"; sha256="0ixjr4r3rj4q0mhv3nkvl4f9h6a4p0zhb90byri9w9jwskzm41h1"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="0.104.0"; sha256="1k3xk588a6jm4cifpaljciwfhwwgz1f7wigwlsi06mqnxic6d545"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.2.0"; sha256="0whrczwqlni05iifra614mi2s9a9byj8gzi9dzh85947nxvvky67"; depends=[Cardinal]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="1.8.0"; sha256="0f8b7zf90avxl9siz4289m91yp21w4bk5hjw6rpkl2w2wvgcz6a1"; depends=[]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.8.0"; sha256="0n3v9d4dbdwbjr01sn4gbys521wmqsnfdg2hbfs0fhp9kajrh9ya"; depends=[bigmemory]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.8.0"; sha256="08p3n2ds4fxwbh0xp19z7p6qf7p07h87hxlcfnvsf0vzi8ifp146"; depends=[affy hexbin limma qvalue statmod]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.6.0"; sha256="05gbp5gnqmdpc3yk1mbd7vj3phy1kjyimvndrc7ijvnmcg7dzs9m"; depends=[]; }; - CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.6.0"; sha256="1scg0mij4rpgb4sfk7fzrd3yxryglnj94gv5dgj6k2gw1551xiyh"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.2.0"; sha256="1snbk048xigzskajjcm3ihm0cj9yb57h79ac91cmlpqkac6bvpsg"; depends=[]; }; - DLBCL = derive2 { name="DLBCL"; version="1.10.0"; sha256="0nmhm768cpfq8kzhc0x33yqdaw9zi7n0vzgaw2qb1f89dr0bwvm4"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="1.6.1"; sha256="1fd6wsg7v89iknwnpf0ypxwvpz5kl6dzwm74dsrn179fm2wxjqjm"; depends=[GenomicRanges]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.6.0"; sha256="1plla7jzqarwcanyb2ss330y9ssmrr6ka6fa6040r1z0y64c12qj"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.6.0"; sha256="18yanbz9nnaxsxgnydvr55xw95aymk2l32fad3xzh2fb1lb3wmqm"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.2.0"; sha256="0cxzw6fb3gwp46j3gc59ygiaghv4wi3dx2dbljbq9f5csnfwdr9y"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.8.0"; sha256="1s50gkjvsradqrjz47xlpzxrl1xad52g07ww75vyrgk0pqdczcgr"; depends=[EBImage]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.6.0"; sha256="1n4nmcynm9g86n33x4ndgja8c1qkk940z9dgl15y47plyc4xx1mv"; depends=[]; }; - DvDdata = derive2 { name="DvDdata"; version="1.6.0"; sha256="1vzxlaa5481w70cy9ihmm2xk9hn7l4hwvi663i6fgjc1dzramvql"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="1.0.0"; sha256="19v1vy16ppz1nc9s4586qvsz70d1jq7cx5rj4ravnd6kwvnk12xr"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.8.0"; sha256="0dh37fdd8y2fnr0mf7c8jxizmpgd4xb51l1wyvbrc47iqb068g33"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.6.0"; sha256="1s077sdz9szxzva3js1qcm5p64yy56bxjcxsf474k12n39ax5bx5"; depends=[]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.6.0"; sha256="1q020k3iaf74cipyj4dz3qqi1007nnjhpgqf143axqzl9p7cy9f1"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.6.0"; sha256="0vwdklxshkpsv3wi69j7m1vdjl556zw6hxzak0jcnf60m4hmyxj2"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.8.0"; sha256="1g3jd0wihx2nw5hfjmpv3vgragkgx0nwh3j2f2fl2zdbkiaawf7j"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.6.0"; sha256="1xk67dxwmpiraidfmr1k6qqbfi1fnpzsr35rn4khiwh6frsyvw0d"; depends=[minfi]; }; - FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.6.0"; sha256="15f3b6p5gr25pfrnzsd90w9dnajryia66scpd4jfrws8jagccszq"; depends=[IRanges rtracklayer]; }; - GGdata = derive2 { name="GGdata"; version="1.8.0"; sha256="1r2kshwi8iajk0rwzkccdw389ffvkzivg82f4bri3xw0sq57fm50"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="0.104.0"; sha256="133myyzjs6ybj0p7vmrz6xbrc21xid50351pyrd2hm8xrry8h7sa"; depends=[]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.6.0"; sha256="1aldm4mjzdfwnfplrr0nd115w9s877xq1glm1lv60y7dbcki0ghd"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.8.0"; sha256="1spphp552kajq80q630bwq9ynjfb0abl97fhkfgqi312xiyz8hs8"; depends=[GWASTools]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.10.0"; sha256="004d5j2pfrjll68qdswpla81vl6n91vq3jq5rqpc4dwsbgxwaziy"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.8.0"; sha256="04s7jdlhls5rzyaczdar8qzln008c97fh5a51mysxw8d53cj2qd9"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.10.0"; sha256="0smdnfvv8gmccxa648lh5smz2cb157bsh823kcwbb49hlm3m1mp9"; depends=[]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.104.0"; sha256="0d3vigzcrdx0jk9bb27xn7zkz61jgfwsljw0xgsncq1r34v3jrmm"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.104.0"; sha256="1l5xlfjlg619acc8sr8c3mm89cyqnkaicscmjbz6iir2zvprx0qm"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.6.0"; sha256="04a9mqs7xfvyk8604g936hrgpfrq26xhi717caf32jh8hl2aaq82"; depends=[]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.6.0"; sha256="1pqahziip8rxmnx2vpylxlfj7g21f051d13f7if4p5wgdkyy1n96"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.8.0"; sha256="042axcyf4g5m5b7yl97x36n69jr3rhir3bxghpxw0xc6cbxq047g"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.6.0"; sha256="10a082khw646qsqalijks35x7if997181phqw66p2gg9iy2pq0w3"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.8.0"; sha256="1p6wh8y51jnz61akk5n03aklph4gh5xbkzy30mnk2gassfgd7psp"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.12.0"; sha256="193q80789jd4afgij6pzw86pccwfg1hyyr88yc5vmvh922g94iw0"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.6.0"; sha256="17xnxqbwv073qsyimhrsssc32xcsi2v3kh4s2qzy8is3snv560ff"; depends=[Biostrings]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.104.0"; sha256="125bhkzjva7xw5zys3ahqr0qig67yms1w37zh86bcf7x2wm88ky2"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.8.0"; sha256="05hzmszj7dpyb6ahkxic7ykxvc57zvdfv844yss4m0a217mymglz"; depends=[Biobase BiocGenerics]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.8.0"; sha256="0884yzyn79sfbr4wbv8vjq5ivvvk21l1r273w2sqbqay41kakrkj"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.2.0"; sha256="12ycbz6iiq0byfvc3f3y9vfafqpskys3wycmjsiym2xscmvhqdnw"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.6.0"; sha256="04srfy56sb015iprc4r634dkabvq44fhhl7i8j9q9llg1bl43q06"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.8.0"; sha256="18alyl6hlcnx5qwakssfwqkl2aigjmcbrvxax3k9h1pvi3hwp2vf"; depends=[Rsamtools]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.8.0"; sha256="0dz9qnnnri2zx8iy1hshyssmq4ry16194n5gbq7j7db9c56i5ymb"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.8.0"; sha256="0kp9p51v0c3025d74gx64qpyxhgc0rrdp5li0x2jvihyjgd1wz4r"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.8.0"; sha256="0a9mihv039f45n6h8isc834nmckcxhailah5lqmgca6lz7hclnpf"; depends=[Biobase lumi]; }; - MEALData = derive2 { name="MEALData"; version="1.0.0"; sha256="19k7fppx41v3lwrbm13d9wni7z1hjaxms14aap00ffwpwzs6f0z5"; depends=[]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.6.0"; sha256="1jq48li4m8ha4alfhqh7aqkrd18sk4fr1qb7vrhahqhb5q7s4vg9"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.8.0"; sha256="140p9h1f3zg5dm8nqs9hqwydlw58qzs32my2d4zmzzk6g41bj5pc"; depends=[]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.6.0"; sha256="111830m6mzc0dlvqpq4ixi1zrfkp66vhj9i3433kyp9mw2d7mnc4"; depends=[]; }; - MSBdata = derive2 { name="MSBdata"; version="0.8.0"; sha256="10yngdppq6706jmvd8i00l01mva8757aavfmz8mmvcyi5cggz200"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.104.0"; sha256="00j2sgljvqpimd574k1v8apbnsb7sja79alwxq2mk26y96zh76a9"; depends=[]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.2.0"; sha256="0qyvppw5p0akqkxk26b955gjn15rikxyvxmkwd4qrv4pbxbc1crp"; depends=[MethylAid]; }; - Mulder2012 = derive2 { name="Mulder2012"; version="0.10.0"; sha256="1dlk8nrvpfk4byii5yssss016yz3qc8ndldgj44p97bqs4nfnjb4"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.6.0"; sha256="1mg7rw32is8zp86rgypp0m4xv9s2phhl1z7dvdcz5knmh0c15rp8"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="0.104.0"; sha256="0wrzkqs7171jq3h9pkphz0jb8zdr3qqvz6k3xylyd13mapjabx85"; depends=[]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.8.0"; sha256="0k7xqri4z3jqaqblplijddbcmaz0j1pkmzqxk13nrw501fa8cirr"; depends=[annotate Biobase hgu133a_db]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.10.0"; sha256="0bgcfpyhyx4dxfn54m3h9xi15xga6ckrjfr3yjmw73fyplz2bmlh"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.4.0"; sha256="00jdgz26ywqff7a216snj25kdd1dw0mh8y2qjscw9rii0mwxpg52"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.4.0"; sha256="06mm7vp93g9jy5jxkcn2cmn8w1dq3k97aymi24hzgynnbzx4bcw2"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.4.0"; sha256="0ivzysswnmj338fb4nmriw3hnslg4s8mqcskibgs42c2vm5c9ak1"; depends=[PWMEnrich]; }; - PathNetData = derive2 { name="PathNetData"; version="1.6.0"; sha256="1wcwbkhr4m3y3yp8p4zqyjlf6gvidzfds967bflfmf6yfgfbfmf4"; depends=[]; }; - ProData = derive2 { name="ProData"; version="1.8.0"; sha256="1lwa3cick6v4cdmb0das24vh8jpf9c5vnw2mpsckiaqzffx32n9j"; depends=[Biobase]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.0.0"; sha256="1iwaing44cknnx9bhfq7qq8xcw8zdhi73p111y9f9gk00g8kwkxs"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.0.0"; sha256="1kzr1w4kixxdd4nnz9ipkwqisx4r7wqr657qaa81axvsw71mawmy"; depends=[QDNAseq]; }; - RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.6.0"; sha256="1z0dbjid7fj9zixi3nyx9cjzmxhc684wsfglkd937a248s7f402f"; depends=[RIPSeeker]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.8.0"; sha256="121dxhy7grdx0qgnyn303isrj4pvm8h6370vgd5bidz6vp4fh0h0"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.8.0"; sha256="0gdphygdpkcsxagpc2ifyqwdbr3imcym3xjqqazr2lczwpdjaffh"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.8.0"; sha256="17pr4y3y6dpiqnsz5z4178jmvvdx75175kh3in4gk9q1wwsc7d4z"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="0.104.0"; sha256="1ln5jmwfxhjsqq51c02fa2s11kh2vmqgagllknimx32r105rg8mi"; depends=[BiSeq]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="1.0.0"; sha256="02c9id94m6wyrfk2s6rm5kbxzr22jmjlmv2xkay9c2k0032687aw"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="1.0.0"; sha256="14b2rlka05vp1l91g37kbpff2cc9fy43wmr90xqh0ka6rp1yh9d3"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="1.0.0"; sha256="16zz3g71y0v2zbca9iiv3p09nd9rg8nh0184q30gk44spfd7chcd"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.104.0"; sha256="0nagj99fd99jamyhkqif10nib5d1l1v96j73psqk07205ivpgvfv"; depends=[Biobase]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.8.0"; sha256="1hf9m7fayq6ld6ps2jzwgfv1pxj5lzxlnaybgmfcyk90nsilbmgd"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.2.1"; sha256="1lk91ma5431z9j0j7p5cvkg2bvwggddjfpxy8syd981lyjmpw2f3"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.2.0"; sha256="0abwn5qckc5bha73msgcf2zn4v20lbyc3c7g3ag0lj6jl6n0hrb8"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.2.0"; sha256="1q9dcjqwf6n5zld1wfcy0s1qjg0fgxvvxfjvxfmlialwxc0bq3wm"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.2.0"; sha256="0ycy0a270vn0q0psa4ypdj6vwhfmwa15046dmi17xhw73rh3409k"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.2.0"; sha256="0zih5n5jh0fwjyswdk7m2v0dyqxclsgd1plblgzsdmg9gk0xr99q"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.2.0"; sha256="0xkhdxam57zshrx3x8iyqlx15iyfnb5zjpc51fzw286xx7qkwm12"; depends=[edgeR]; }; - RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.8.0"; sha256="0xqzzrgw759kh9had1iav2ffvvdbpf83f8wvpxwb3djpikaxh8s7"; depends=[easyRNASeq]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.2.0"; sha256="0l8bh4zlrqzhp0gfqzjsqyl24i17r7mg834dq66815ziq3qxk1i0"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.16.0"; sha256="1m84i5w4kmwlfxaa4y5l1jia0k4mv5jg1amyhakyyp5vgznc8j6d"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.6.0"; sha256="0jbmjc6bkqzi8m6vkr9lk88497b42bqbvjcjm43im9m28y6dacnb"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.0.0"; sha256="1b784dvqahr36953km181m5fh6cp00v9yhqf2gpadgfzbxvfz2zr"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.2.0"; sha256="025zx7s86yry6j80n08cxai8if8wghvfbkx711ilgs480vd32j1v"; depends=[]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.8.0"; sha256="0knq9122zj2mb1ivv5r2i5jzrj0xr70i7yxkv176rkp7avbvxjlg"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.6.0"; sha256="0rrw0ya3hpj020wif3hhnaqprcbjyw859mn70p0ncgjrz5rwrcs9"; depends=[exomeCopy GenomicRanges IRanges stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.12.0"; sha256="157a1ckrpx6n35w8c9ipv0dnx24y76bm1vpk7mkdlbc6wblw5lwx"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.10.0"; sha256="0bmwlc4zg2pf4da2gzys5sjbm3fzr6piw7jmbb44zxm0hgzjvx4g"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.6.0"; sha256="051iwkzynlqw5kncbkr92m4qim95h1gri0dymm1dw2b6xzni9kmr"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.6.0"; sha256="1spgsvrlw63w04197s9a6hg7vxy3q1mjwvk649bzhi7d3y6fq055"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.104.0"; sha256="067hzawwylvh92hb6gg5wj6k4rlsmvz3n4i995g8kzxzwwirh8hp"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.104.0"; sha256="0dbmf3q5602fbp8jqkny33rnhvsvylhz2b5lfh6gkrqv33bc7frk"; depends=[Biobase]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.6.0"; sha256="1lrywj4q3ama0qhrbx0ij2h79gn3syln6zrfl0cbjj1qc0gs622w"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.8.0"; sha256="1f6lkhy2ykmd625cr0yiw7x4hzs1s00cygicl9bbpfg8bq5zd600"; depends=[TargetSearch]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.0.0"; sha256="0fqw9md30q11zvqi02paas7kmwwvg882wx678yv2928cn5ba32p6"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.2.0"; sha256="0zad0d17w85pam99ib5x4a5459d3ds8rm5l8q09zsg1x5xkx387j"; depends=[]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.8.0"; sha256="0xbnx3093xz3ifiaj3kjl3kcnl1qgbpnii7ypz5apldf8jhji15z"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - affycompData = derive2 { name="affycompData"; version="1.8.0"; sha256="0bzbnqz0f5vbi01hv7mjc7ajdd68hql046ly7vskma0wgrmqhqxj"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.18.0"; sha256="0vcmpy73wzhgqj6fg7qqdng3x7mi1pvdj563przsb301mviyyqyh"; depends=[affy]; }; - airway = derive2 { name="airway"; version="0.104.0"; sha256="14wc32azs9zcxw6q639xpxyzq6r1ws6c5zbf9fvisp4cfmma8z7f"; depends=[SummarizedExperiment]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.6.0"; sha256="0j7rsxkl9wpp7hbgm8jkmc16m842839x5adnlrqikz64r292ihip"; depends=[Biobase]; }; - bcellViper = derive2 { name="bcellViper"; version="1.6.0"; sha256="027cznns57mvqphkbw3z39lywv9f3cwyrc5cc5nr8271s9cxgvzq"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.8.0"; sha256="0xsz00i1rsm770fpx705bp0lhxq789i7fyrh6nxgb3dvymm6sfnl"; depends=[beadarray Biobase]; }; - beta7 = derive2 { name="beta7"; version="1.8.0"; sha256="1ifrpg46dmxmaxr9vzff837skqwdb6672m9w238lnml4y2rmvxxh"; depends=[marray]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.8.0"; sha256="0r5l091dnlh17k4a75dkwjkpq0rjwl2pkp5r4wk3qf34q6dg2lin"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="0.104.0"; sha256="03v192y9b07h4jlj9vjfzwpnlk7xczcqlwrpjpgand633769hanz"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.8.0"; sha256="0zn7s7bppvynnch1fbd3g1hax5y0bw80bhnqwsksm2kjj6b7p4f9"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.8.0"; sha256="14pk3gi3xn14vs49ay5rxn5mjpc033h5rln8646lljyng7i5j137"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.8.0"; sha256="0gy90309nvwhhx8hvng4rf1nmvfkgljmvr6z2xd5j2j6l3waii2d"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.8.0"; sha256="1k8l3hgnnzw3qlyb57ys81w2v9hk1rr20p0w3bcd33nrhacr2nh0"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.8.0"; sha256="0w8nmly2gcvw3y628k3ckfkv19fq8vxhf15bqw8z5qq974rp2vis"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.8.0"; sha256="0vx2bqh5asjjdy1jnk0n22adanmmb4s3hdxg8645y121mprrg2jp"; depends=[]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.8.0"; sha256="0mbjpx0w5bqbb9vc0x7zl78m6y0gkcad1abfycjlpr7yhf3i1k76"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.8.0"; sha256="0rlls31yyzkisx61y0i15qgkc5ixk0xkd2ix03cv4zz1fv0iyz2x"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.6.0"; sha256="0zwzynw8i72g2zy9kfipz3rik1n7c590bxxniwxz884fafwgn5yw"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.8.0"; sha256="1cdiqx8f5d2af46mnad5zjaazxw2qh68h0hg4sj8p8xxjf2l1d3f"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.8.0"; sha256="0lvsl9127djdrkpk5c4n570sr06yj5x24lfbhrvy4jk8qa4g1qx3"; depends=[affy Biobase Ringo topGO]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.8.0"; sha256="1cm2myjmrn2kiwgfjpkslz0s6l8qvs8g3y0jbfckp31sd1211kkh"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.12.0"; sha256="165qp5cfs87ds7sx525fpj5cwisl4520b911l0xxmgcvhz6gjyi5"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.8.0"; sha256="10plz831m2vynwn5x4kh93iwcwkn6x39q9qg25lvlrj8j3mqgjmg"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.8.0"; sha256="0wjx4072gpsv6w1x7d5q0qya0ism5xw13zl8d1m49jhszk2kns1j"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - charmData = derive2 { name="charmData"; version="1.6.0"; sha256="0qy3dcx745diza5xy6f1qipnnawqx20vp6p0piy9wvwvgalcx886"; depends=[charm pd_charm_hg18_example]; }; - cheung2010 = derive2 { name="cheung2010"; version="0.8.0"; sha256="0qrq5k8gpsvqv5vhq67lgql69x7gqsqyfrs87ih8jir1nhgyrmzy"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="1.6.0"; sha256="04v1zzn7balic5hxlxdgqxpgg0pbsyg5s0ivhn232c3qbidh480g"; depends=[BiocGenerics GenomicRanges IRanges]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.6.0"; sha256="1ys4sxp4biqb8bgqds9y22kiiwxhbv3p32vrbj1vm9fn3isphqr8"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.12.0"; sha256="0nf4nfjymm0vw7zdi0wpcn8kc49kfangnsfajvarpwjikff2bcsl"; depends=[Biobase]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.6.0"; sha256="0rs2fslz39nyxs4v0zjldlascc0rnpzzisxhrnb913y72wlk7fad"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="1.2.0"; sha256="01q37mlxlh0sdnb8ilsr6s5k40awgcg0n5ggj056dcna9nfvqi74"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.2.0"; sha256="0p4jgmg3234siglzf1klzq70vgrsnxcz4w2fw16h34m7jkrhiqas"; depends=[BiocGenerics nlme]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.8.0"; sha256="1fdwns0srpkvzvs87zq7wq6a3a324d6l8mjxncryxdcbgjfv3fb8"; depends=[affy BiocGenerics]; }; - davidTiling = derive2 { name="davidTiling"; version="1.10.0"; sha256="06kjzkgqigfnd44yd9czccqn8nill4v3x3dfk7kmzbz7lmmrdhx1"; depends=[Biobase GO_db tilingArray]; }; - derfinderData = derive2 { name="derfinderData"; version="0.104.0"; sha256="0biqbxm3fcqxsmv3bkxb66cpv54iswpsjizh7i6qmilw20fcrdm6"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.2.0"; sha256="190ppd35dg559g557kwvd0kpl900x9jvarflhxq47p9zgg35yrvf"; depends=[Biobase viper]; }; - dressCheck = derive2 { name="dressCheck"; version="0.8.0"; sha256="03k7m4fr6ac1pfjz86sgz8ywmvxdxjxpd4rrdgix8bn88mfw9qyi"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.8.0"; sha256="0qh73b5xbrcdmp3kszykiqiha8s40r0npsajc1h0m7xh26b81d90"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.8.0"; sha256="0rssxjpjb7aqkkm6mg1s7df8kzbxiww9yfdljif9ph7s0svi4b5v"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.10.0"; sha256="0vv5ffk08kfqahsz9ib7144hywcqmvm30rpgff18kvqz2ri4391a"; depends=[affy ecolicdf]; }; - encoDnaseI = derive2 { name="encoDnaseI"; version="0.8.0"; sha256="1n6n5jfaqh1gr19grvxkpbs30314s524wfy6ppfqczxw00yrsvqk"; depends=[Biobase GGBase GGtools lattice]; }; - estrogen = derive2 { name="estrogen"; version="1.16.0"; sha256="0r4gb1vnq6nk97fqkhr9x7lq6jljpkmk7q95s0hwjnyavpwwi5qm"; depends=[affy]; }; - faahKO = derive2 { name="faahKO"; version="1.10.0"; sha256="0dkpzkdlpi757h6kkv02j74nxwz770l7jfmdz6hh6np0c27yrlqk"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.8.0"; sha256="1syxcgmvb00a4k1l3c17rsmllsp4baxpqw85gvzlkix038bdwqcg"; depends=[Biobase]; }; - facopy_annot = derive2 { name="facopy.annot"; version="0.104.0"; sha256="139wd2w7mmrwi69h5mlf73zs3zaqr0kcjv116pd2r7b1dryla9y5"; depends=[]; }; - facsDorit = derive2 { name="facsDorit"; version="1.12.0"; sha256="0dlbjvzalixpxcxwls6wrlzz4lrmsxs23g1yvin940al9hli612d"; depends=[prada]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.8.0"; sha256="19vf4q4nqk937gvn8ca4kvisyxw375xlj9g238xmlh1z33bqak7y"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.12.0"; sha256="1brnc0vigpi711yc1yq69x39sksnqd26dzip174ih66hp0if3rsm"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="0.104.0"; sha256="0lbzl0r66q8h9x41167zhx3zdmf6wq1f7z1hxmq8inpl0ydrynnm"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.6.0"; sha256="0ngq0khy7f7w41mj89fdrrd5lpxznnxg53x6zfgc6mx0vm1q13ak"; depends=[flowCore]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.6.1"; sha256="1y97xym505rpgsyi1nbsazaqwfxrkmp664pmdlfvp8a3l963bs2n"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.6.0"; sha256="172bvi6v824j82cr2y9y5zvdgzfwk4kdw0r54jqjgvp2kw4v55bx"; depends=[]; }; - gageData = derive2 { name="gageData"; version="2.8.0"; sha256="1h2gyn9nn8198qd99bdpf7r9f71l76yzzcagbg9z9qjhpc1nwllq"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.8.0"; sha256="0097vvw6z3ryiv11jvapih2r588ix7qdizmq5g3cc1s5dqrmaf02"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.10.0"; sha256="1ql5s1p4phhcc9lh3knrgnazkpxlxhvwpvxi0d978g6mjlbbprs2"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.8.0"; sha256="06k158hh3pyn9fw49njar3aj71f12pgkm2yaljnvlnabgv7r0a84"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.6.0"; sha256="0zijh0s2dp1rf7z4rs8afdx18gqgsll090vclckf30jy3jy7d0ri"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.2.0"; sha256="08p1n2gp3csw7jvlkq5h3r64ix08n7kniq508w28nc0mms3pa4vn"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.2.0"; sha256="17wy3fkwq16kg3zcm30b06p0a6xwpjbjqrd2rz42ypw7d7danc3h"; depends=[SummarizedExperiment]; }; - geuvStore = derive2 { name="geuvStore"; version="1.2.0"; sha256="14xm3d808mzbvjliazn2rzz9l98b44h4x4s50ass2mfr470k79fs"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - ggtut = derive2 { name="ggtut"; version="0.7.0"; sha256="0vpqzanzx3mwaz0dz29s5k9l0nly004sn3f5rjx7z8ww67ka4ii6"; depends=[cheung2010 ChIPpeakAnno ff GenomicFeatures GenomicRanges GGdata GGtools hmyriB36 Rsamtools SNPlocs_Hsapiens_dbSNP_20120608 snpStats]; }; - golubEsets = derive2 { name="golubEsets"; version="1.12.0"; sha256="0y861yr3b9c5rxi1x9796ka9bycpkwfpj7n10ikxkqggip02044j"; depends=[Biobase]; }; - grndata = derive2 { name="grndata"; version="1.2.0"; sha256="042cm5imcb1fzmm7cn4lyd8isq9yddrnvdmqv7gzklrpplhlcfa5"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.2.0"; sha256="0b2vd4vn1khk4cd3pdcxwbd26srk3w3zdlk864vhgha5n9wb89kb"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="1.104.0"; sha256="1jhr6gijva7498hm2mzi94ag0wx8qx16nf7l454v631px12b2hra"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.12.0"; sha256="19g5krckkxfnk2mbvlk2agwn2n1pwx6m343nngr07lysxjdddsz3"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.12.0"; sha256="038vf5xfkn266f5w0hffdn7f8xi4h4dg2fyq1lj7b8mw3hzsbd8s"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.12.0"; sha256="1xz4l3nj60z10n0ia6vi6b1sc5crkl6my0axjrlc0qq7jzxpvyf2"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.12.0"; sha256="1qip3qzri1ihms528wff1y9ci6zq0j3czbcs7hqiyz57yxi4phxl"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.12.0"; sha256="1xb9jv4viy1q1bvcz795j25fa9ss3xrrplz3rykbnis5h87n6lbj"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.12.0"; sha256="0a3qshi8024n7bc8g9h3qivp6xzkd40xsll948jldzid49scqdmi"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.8.0"; sha256="08kr48nvrmphj7sj9nbj0mj1hyl97pp0g7qcnr6fb8vn5lvyriag"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.8.0"; sha256="1wj48wagn93g7w5apl4jxii34wxd7dhiya965bkbjj6h2yhwykfd"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.8.0"; sha256="0ccrqiw4348vg3pw0pl4bi846ax7spi0bxrs44gp4bsjp7amn1s9"; depends=[]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.8.0"; sha256="17lrqvdmqc363jqr5chp3yp452hi5592d33hznira1ra9xjdk30c"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.10.0"; sha256="0ylz3l54ip7rqiwlbzfnk65hhm4v5rd9mi5g1r97n9k6gyfd692d"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.6.0"; sha256="033afw26ng2vc0fj3ipljmrq8vm0q5nbr7gh78i5vmpnkh4d5wgp"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.10.0"; sha256="18fwmsf2yh4q12ca7h78lk85rcf3a3l57v0hm72yw3zjdhhakfrp"; depends=[Biobase hgu133plus2_db]; }; - ind1KG = derive2 { name="ind1KG"; version="0.8.0"; sha256="10yiqj0c4vclblblkr0hwair1hyyrlp5z81y72vcjgv4wkfmxsbk"; depends=[chopsticks]; }; - iontreeData = derive2 { name="iontreeData"; version="1.6.0"; sha256="1bl2f2kk930bry8ibl3234s3ijszxfm0xhcqjay771xcfhf9c14q"; depends=[]; }; - kidpack = derive2 { name="kidpack"; version="1.12.0"; sha256="0zvdm8xyn7xwaf1qrlaizh1aqdwbicnm0l7kr554k651plcazjd1"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.6.0"; sha256="16g1nz8mxr31ww39y7aicvqrhlrxwbdvcnz6cl105md43f10h7v2"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.6.0"; sha256="1jfp6j60ic07jqmmcmp2cp0ha42xk8b6jldviq5463yf232mgkg3"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.10.0"; sha256="0r189bh6ysarqicrsi2s5v3d0wpl0y3ycpa85igsx6yq2jsv1hlz"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.8.0"; sha256="14k7xk8817vwf6vnvc2fjk4jv876s4da8d3fi84cz3hgh51rl7rz"; depends=[Biobase]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.2.0"; sha256="03x2yzpr6xr19k7kk52x6zlpjkfjhhfly1xsvdijrma6dc0rzg8a"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.6.0"; sha256="1xdhww79aig0a792akwh8mgzl7qagncl26kwv8fn4hw5vrjyxmyg"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.14.0"; sha256="1h50zfm49rihda3agfb4ldlaaw651k82cfjranzp27h089glskns"; depends=[]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.6.0"; sha256="1qs5z3pbb6y04fk633vlps54gr6vlkvwl4qzgx4g7jxmlnm6w5sl"; depends=[]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.8.0"; sha256="1ahp2w6xcpav6virrzcb11df2wc5phhqarlwq03i2s284wx27bxa"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.0.0"; sha256="06chd7drzqnpbwnkc22mii1k3bv6dk96nl0hm1fg7hv2bc83j1sn"; depends=[]; }; - minfiData = derive2 { name="minfiData"; version="0.12.0"; sha256="10ny2i88w87zlizla2jx1bvrnhq9f245ggxdgvi6slrlp35l2s68"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.0.0"; sha256="0zk9xfyxbdzxpz36ly1nsqrw29zmxqs71x1q3iks0p9jd60iwwrv"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.6.0"; sha256="07dpak6jdw7mz5jjnysyg82wikjxnk8z4wngfhdfzl0wxg23pbzx"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.6.0"; sha256="02lcjb38gf0kr2s7ydpzh1slh6d1b9vfgdk4fab2nb1k6g6nd6fm"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.8.0"; sha256="0dxdg11shs4lj4vb9ja7i9v9xsdpw63ymhzlfq46claydmxgkcyz"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="0.104.0"; sha256="0xh438ayq6pxxwmc79z4cr9mw8ribh09b9x43jcka1nn9g6vka46"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.8.0"; sha256="0dl7q8r2bxqx130w0d3d860svdsnjwhsxq709xk3ir4zn6kdn2qz"; depends=[]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.0.0"; sha256="0fqmzvxznik2abrh12q4ifq3yxk6nvzf1lx2mnw0cwqgndma0vcn"; depends=[]; }; - mvoutData = derive2 { name="mvoutData"; version="1.6.0"; sha256="0whmdrlnxcm4h03gh9xm386cjir6y86k1kzdl3z50y7ydzl0zkyy"; depends=[affy Biobase lumi]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.8.0"; sha256="0ndwz3z7jzyr6ac1b8cq6j0qfm8s28hpv42w5bsgp2vp85prqa1d"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.8.0"; sha256="1g80lgbla7dpd1vcvsqgmwqcp71mwnsyps6qpgmyhyq8z5jxgkmb"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="0.10.0"; sha256="1ydiywvw8afs5j109dnbiq6dp5inm2al8rivfgdfiqbi7w0a4iqz"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.8.0"; sha256="0x4n9hqpfgnzpbsa7arzav027n0yyglljdaflzy0z8vvypp9skri"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.6.0"; sha256="1kzl95mw08162widlycg3g1230c2dsf3cbvai1pb6sc4s1sb5m1k"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.6.0"; sha256="0h6yg6glzsncq7k72vn3l8gxihs3r3kq7420c0sqbp2pljkcycn7"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.6.0"; sha256="087fq848yyq5vl1sv5984qwbjk7navdx82gqwq4446035cv409x5"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.8.0"; sha256="08f4chypg6hkgi7idq3709zij0xpw3k2rj8gkcyld4s141nzv115"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="0.104.0"; sha256="146wha2frjy8b9b6nkghp7aqzrilgircglpq1k0knzndnan4k4mq"; depends=[GenomicRanges]; }; - ppiData = derive2 { name="ppiData"; version="0.8.0"; sha256="09f14jlrbc9pqna1a5lhd9l32m4jhjgghhdczlc7kni75mzsb7ii"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.6.0"; sha256="0gfff1fafp5jyyfh71l7lvddm0xbx215hac92mwlkmksi8jz3f74"; depends=[]; }; - pumadata = derive2 { name="pumadata"; version="2.6.0"; sha256="1lw6jii68pzrbr3cgb0zsfbjflz526l3r5qrpbnavz0szjca4h5y"; depends=[affy Biobase oligo puma]; }; - rRDPData = derive2 { name="rRDPData"; version="0.104.0"; sha256="0700xlvfkgyrdgxyq5l0dlq2p3qf51jzamp28qqhs95440cyg26l"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="1.2.2"; sha256="1xaq03x8qxbczq0g880vdgria93s5bq2hn2nx5gz3b1qkkwb1sx9"; depends=[Biobase]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.8.0"; sha256="161psq421pkdd9kzfk62633sj4cql2q0wjwzivjph9cm228238mp"; depends=[]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.2.0"; sha256="03x8v75s6v3yyycgk6zwsh4j2mnsxndgbxmcw8q2a57q13y58bwi"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.6.0"; sha256="1avgc0qm26r18pxrdm3fp2wrqzcapind4cb88d4z4v2gmp8y04sh"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.4.0"; sha256="0vkw4ly21jx1lqn6hhdi43mbq7idsxb4a21inwdv5fzm7vdkplb3"; depends=[]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.6.0"; sha256="14sncdp7zb0ddifr6bcy14nxp8h9dvy3gy354i74h86yvkwdv9s8"; depends=[]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.6.0"; sha256="0l9nkprrvkdi764b9l3rckd7zqv13y55m4s37ls3xp63i9yddqm9"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="0.104.0"; sha256="0w8r5g3925jy6pb5dm916lns9h7qgwy2vwnl87dwa5ff17rfmj81"; depends=[]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.6.0"; sha256="014sx5jca37jb97wblc47vspxx7iwi6vpzwrgjl22fvv7p0claj7"; depends=[]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.6.0"; sha256="0b25q1wni5yfjqxmhkjddnh2301rnx692n8n4ghv4l6sbq5x2kz1"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.10.0"; sha256="18k39mj374c2lfvjkvnzmm2phnisq8dxmsg0jgarzwqxc6740xak"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.8.0"; sha256="0ivs32fv6hfna124bmc5bbj1pj9jw15qays105djwidsik0q4ml2"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.0.1"; sha256="0zsqqsbln5isipr186af73084bn7yq6c4z7mni4pckwh63q45w2p"; depends=[BiocGenerics]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.8.0"; sha256="1wbnxqmr40iy6hcpks7fafmlwzi6q1nc87494kkcsxcg698317dk"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.8.0"; sha256="0aynz111vj0zki74c5bp3f8rvmm7in52ww9aknfszgg6gi02a382"; depends=[AnnotationDbi]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.8.0"; sha256="042z8g1mb5hiziqqbjngca1vi5mvgjny7fhx6q1z0nxrymg4yay9"; depends=[Biobase]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.6.0"; sha256="0xx60f6gvcqvj6m5wqh7mjcf0skbzz5w5bchcalmhgy56l7229a1"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.10.0"; sha256="07nhfambydc613smwajcv8qiwg0rc8zvjmyfcvi91nz49xr3cygq"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.16.0"; sha256="1lzz9kp9raihi3n5p05saz549kblx9k1hy9fwvh73l91gm2lmazx"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.8.0"; sha256="1vzfl8ykwwvjs58w5h8myrqfj67qpaf1zaf714r70pzx9zc1slpp"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.6.0"; sha256="0d3ixzas7m4xdc20996di8x48z661i213rhkd4l6hqb4hdjb6mm8"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.8.0"; sha256="1nv31zdy2br27qskz5dwxnpz2zgi0mx2fp8ddhbffrkww8zcha4m"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.12.0"; sha256="07lmji9sljscwqd96bcllwc3hqzrl8mwj9z7fc6kjaam491iz09f"; depends=[Biobase GGBase]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.104.0"; sha256="11z6p4f8nmgjas085dvb2fnlsfb8qbbfh0jzx650sfkb2fgqqr6l"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.2.2"; sha256="0wp44a5i8qdg2jnxg1fvc9i79m6zdcr0027cp4fha11l1syj6dh7"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.14.0"; sha256="07prs6q7qahv763ldwf9msyglbs0yrxpr0l95aykvflyyzlkdj04"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.12.0"; sha256="1h4747m67sc7d6hif42dv62y7ffzv92rili95ajp208i7j4451jp"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.8.0"; sha256="0jkzvn9kg2laxng4gkgpx7x30zx542y1z0ywvidy8w7xa99d1c6q"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.8.0"; sha256="08r8cr8gddbsl0xgbvm9vrdazzg874vkglvy3ji5y88nph9gli5x"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.6.0"; sha256="0wn61kslpxp50fih4hrciig5hf0ydafabf6lzn8nlpamkr54gcw8"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.10.0"; sha256="1qp649gli32h6xffw1sfjsfpxmm3wfn870sx6sgfnyxkyhr4fa4y"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.10.0"; sha256="1id05rc0q2nlazc4ndjmd8blwzd1xhk06rwc2sv755v0amprn4iy"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.10.0"; sha256="0pqm0v6frq0xjkdjbxgyrcipjkyp47r652gn20wc0y5kpkqs0pqq"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.12.0"; sha256="04ih81msr17zwl00n36xx2l180d6q6q4cbrr2mdwr6ppfxq60g3w"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.0.2"; sha256="0n28m8x6kdkgqrzx468zrssy3a5qla294xs6mqxi5ghsppdasxwh"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.2.2"; sha256="032f48jq7qm94g45lv1kabjc6362xfhr63dr0spsh17vhipbj06n"; depends=[]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.10.0"; sha256="026fgqgb5b7s09zjb93qpvn9lashvcmw4dabqi80vmcslw1qynrm"; depends=[beadarray GEOquery limma]; }; + CCl4 = derive2 { name="CCl4"; version="1.9.0"; sha256="1byiayjf1jbqj1xfarblga5523gqnivr0m14pd1flrmx4d0z22kb"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.12.0"; sha256="1ni36n8cadlwybg9crnw1kq6xp7l0l8y6mwnjqlqzykxn5x16w08"; depends=[affy Biobase]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.8.0"; sha256="1wi4mg9q3kg0rglkz2i630y2w8p2hk35k013iav6r7k02n9pb4xz"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.0.0"; sha256="12q519wik54dyw2svviib04w0z5c884iiskk0v7qyhx9kydkmkfc"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.8.0"; sha256="00zhw6iyak3z38s1xgh3mdd1kb166r0vm0s5np4xkp93pg6bcj7i"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.8.2"; sha256="0x09csirjgsww38r339cpcg446xx4c5nfsifvfyvzdxxdfjq42xa"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="0.106.0"; sha256="1lfhb82hkv4ylgwdzpmlsk4rk66ingp3p2zd7c43w6rawald3s2y"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.4.0"; sha256="042456sy3bikv66i2j6zidk9s9bjgd2hl481jy2jzcjg9jqzkrvr"; depends=[Cardinal]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="1.10.0"; sha256="1i4ifwiim97ap0n7ccyy3w0yh8bf22bm1laif0vb1y8cibj5nwnc"; depends=[BiocGenerics GenomicRanges]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.10.0"; sha256="1v0h5k7z3hvwkf56xx42s8y1dx4bmwxcnl16q0pmfnakimvbm1bc"; depends=[bigmemory]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.10.0"; sha256="0vyvzdr6iznp82njz72vw7c5amw7pgiswv7a3yv4iiz6ilcp1lb2"; depends=[affy hexbin limma qvalue statmod]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.8.0"; sha256="1b8x7g8vzd6dmfpg5rih41bpz1srp0ykwkiz6fvwqxcic3wwjhyr"; depends=[]; }; + CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.8.0"; sha256="1f7g07iks077b5wis4p960kf1smwwcqv8hbwqqkix5gan5hwy09g"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.4.0"; sha256="1z4bcakmi84jgiz1c46g2v6yqmxdzy9n02adhfzbh8jgzh2apq5h"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.0.1"; sha256="078dcj8cjj7iqjc5i6q1d7bi1frvix8f8hhmb4x20670fynda3pr"; depends=[knitr MSnbase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.12.0"; sha256="04rg3c1mh5kl0dkm3wyxv5izm6910j6zin8lw21dbgnvnf7v4fg3"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="1.8.2"; sha256="0pl3wj2nvjhp84cvvh2yqdqqsa4b61wyqmihw8xg4qkh78dnizqk"; depends=[GenomicRanges]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.8.0"; sha256="1qnq24lrpwrlcn3x1f54mb6j3qpa6rjcxn1r326dabryphg2j27d"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.8.0"; sha256="0x8is94i2svw9hlrhypkc0b9fa5jdpnr8vbk0iywdg8fp3a2yis0"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.4.2"; sha256="11v1f4nh2r1p29dszwgq451l5cfhppylggg578xfn0i20dmwfrry"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.10.0"; sha256="0j22cb94h0sz17jdvfcc6ifig738qkx8rhlhyps42vjinslzh317"; depends=[EBImage]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.8.0"; sha256="0qzm3zlsxhh3bq98wbwar1lmrdkjigxbw249l4l6fs6rkr89fjh7"; depends=[]; }; + DvDdata = derive2 { name="DvDdata"; version="1.8.0"; sha256="0mfgcwjqmpbi0bqy0xav8bd6w5pasx10xmz3sk5qx17iw873n6j7"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.0.1"; sha256="12294jrirm23sch7b84ylvsxg7njw9gj5h9spjh0s3mzp0iak3ac"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="1.2.2"; sha256="1invnncdcqxv8iz0asj9nkgxrvjannqfhgmv23w2p7hpvnhfc18h"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.10.0"; sha256="1i9cm0way8g856h90rcgq6xh0w3qkv4cq8ac0k7b2gpnsa342m6w"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.8.0"; sha256="1yvk3px2dcnld9maizb9l5xd82pr7y9j652gknn20kl6d70rqz90"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.0.0"; sha256="0fd7yfzdyr7lrixaxji14012z2kqlyx5g9236r9hi5v1fcrxgi1v"; depends=[]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.8.0"; sha256="0yk4aqi5j94m1n2d0ablmcc5czk44nyimi5wfagyb51187hvad8s"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.8.0"; sha256="11lfcbbmz5yk12j5yvn4y8ylf62i98h6y3b0mkd63lyswfkzknq9"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.10.0"; sha256="1i3f459rd7fnkqqpdshzxkilcm3m2mivw8hva3y7gb6734gpllyy"; depends=[minfi]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.0.0"; sha256="0rq9b4xdvq6v1brjvn7qhin3s8jaakc4s5va87qnnr6hh41zlj2a"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.8.0"; sha256="13qr6a95vwbx3ilkbh2pbim6yb9hmz0f3gn2bkj3a3hgm1skbh5c"; depends=[minfi]; }; + FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.8.0"; sha256="07pdy0fpprs8ri1vrg3z97zdrifrgh9js25g2imb7f84fnzcl1gj"; depends=[IRanges rtracklayer]; }; + GGdata = derive2 { name="GGdata"; version="1.10.0"; sha256="14y0vmzhf3afz1q3ydrl2pwdn42x2j58rmyj2rbidcj1l2dqg4gd"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="0.106.0"; sha256="028f0xfnmq5rn8z1q12rmd4wmcg4r7vncxkjbb589d5v7d7p73b0"; depends=[]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.0.0"; sha256="1j9gh4glqw3ip442m4rp2i174l9ql9kbxd0slm7d9qgfkpggzyki"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.8.0"; sha256="17azis177nwq34pn55mvz4clq32w2qn9m9rfbd2j99y7m0gcc63h"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.10.0"; sha256="0xl7idhril2jfas34g7nr7b6qvnglkg6q7q9xh1damk166dpb49g"; depends=[GWASTools]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.0.2"; sha256="1rxkg8wxpkv0rlldyfa01f8fvph35gy7awpsnw58qfj92bcsmkgg"; depends=[]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.12.0"; sha256="0701nvh83q3r1mkzl6ywb91zhnmwshmsnl22zb2dhikbn1j4rzbc"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.10.0"; sha256="1rpvpgirbwmyc3ybh2z7h6z6a0bw4jfcm60c1kamnvj44nk9f32j"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.12.0"; sha256="073sb84gy804ipsdcrljxvizxp637zi9lxzc8zimxk91l35mcrnc"; depends=[]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.106.2"; sha256="1lc0q6q2601z53fyxzfjzl4yg14pl0rz8j8jqzjjvb3c29an7wbb"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.0.2"; sha256="1yd9np9diir65cndk2n8cdfilnxycl0fhd9kzdz8fh37inrfvli2"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.106.0"; sha256="1bh9ncz49gp25nj5cy4yr577lnzh6byrcps5aic71052xqw00a3a"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.8.0"; sha256="0mmvxi6ippljm2c1h7grhlr0qacyvq63w0mnm9n2g6bjkmwzmn0w"; depends=[]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.8.0"; sha256="0s0ynp1mc60ikhn20phw37happbdxi1gfgkikj51z0aryrf489wd"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + IHW = derive2 { name="IHW"; version="0.99.14"; sha256="1qh81nhvqg5pfxvd6ap7rlksbqk6wb041w1ba1s36gfrjr1ff1j0"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.0.2"; sha256="0whaa0gdqx5c5l8ra6yjl9dx9nkg32fs16w095djk7jn9f140211"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.10.0"; sha256="1l31w7fgaizdglp8khnlzzpz1gwxmhzmpgfbkpnvl7wsdkfa20pn"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.8.0"; sha256="1x8c897bj5bq9ifw4pyvq36rk6sqyqinr66hhxm0gcj0grhi8kpv"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.10.0"; sha256="191a6vyd35ia7dcx7x9vcgizapnpzdyhcqygw4yhsf0z3pr5iv9b"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.14.0"; sha256="13p736wxx77qc4dg2bxl2crf193yj5jxx9p6m5mblqbrgvnr4g5g"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.8.0"; sha256="1wspjfij2h0x5i2lff0j24rx9v3ivp6s9plv61zrj34sbwibwwws"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.0.0"; sha256="0i29a9qa68zxgvgmfx0wyhnbangvbqr2mbdgqh65a56mnjk2ay2q"; depends=[]; }; + JctSeqData = derive2 { name="JctSeqData"; version="1.2.2"; sha256="17ld0vwk9dqyy6a6n386mzklx05azcwcfwbxrbm07z0d7f2fc73n"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.106.0"; sha256="07pffi3ajklina1w35dn1dgj522djymp07dyillxyhm21g64qcn5"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.10.0"; sha256="0c7gdlxnwxlcfvydq93p9zklggk3cgrspshhjzzsmavm1dk917kk"; depends=[Biobase BiocGenerics]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.10.0"; sha256="1fqhs3kmxf3hjld6hmi1grn8j0a4z3s4wxy8nhmwc36c7asmcyhk"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.4.2"; sha256="0kcwicjx327lpnxq1lcmxy061r6cxfz8q2csrxp74dddkyvljmr2"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.8.0"; sha256="0fwkqyh0zhihpp2wn98b0fk23cmh9q2xvxidskia618p69vkyvn3"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.10.0"; sha256="0svawwn2xzgsd8a9k5ml5g8yll70nwpryfsqd98azrmy5jmnpmb4"; depends=[Rsamtools]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.10.0"; sha256="1spiav4m5zfzkbbig0qf6clvzi6gin690gicl6pvfvnwxw9hvc3s"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.10.0"; sha256="07c6by6j3cc2pvj59vsaphnaccks6asgdy7rap05b18v3cv0d85x"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.10.0"; sha256="0z7n1pjrx2wglxpwv8h03knff5ddhcka9jxi7y14jpmjh7k9qsdc"; depends=[Biobase lumi]; }; + MEALData = derive2 { name="MEALData"; version="1.2.0"; sha256="075b5pm1xz7xm35lcbqghlhrb1srfkbdkm3f5h24cbq3qjdlnyyf"; depends=[]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.8.0"; sha256="0yvrr3h57vfxiv2g1n6hiib15i6rl5zw73lic9aaihhz8vzq3hiq"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.10.0"; sha256="1r7cr1fn2x372d2vx9rxz5dd53zc6256ii2laq53i9g558c4368q"; depends=[]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.8.0"; sha256="04065hwj0ncczk4gv7zq9szp79xd90mp15a60rw8vayrh07cg563"; depends=[]; }; + MSBdata = derive2 { name="MSBdata"; version="0.10.2"; sha256="1g4ai2vrbl3dvk53acwsdqy47lh2i6d9fmghclfb8jxnh20ab34j"; depends=[]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.106.0"; sha256="1hsky35vancvwlsqky0d5liz5kfq6fhyqkvw243gjz4rakw090mh"; depends=[]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.4.2"; sha256="1x42fhaaazcwzbx7s47ffzcpga0dg39wyy64956fm42ygbvykzm6"; depends=[MethylAid]; }; + Mulder2012 = derive2 { name="Mulder2012"; version="0.12.0"; sha256="141ibn42qnv0dzzhbqgarzcvcbsqz4ckf0k4fpcgms23ky1js5s1"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.8.0"; sha256="0v4v0z09rh31si29sm8bwjmc3lcjpqnpsx07wyir6kqv5kils7mb"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="0.106.0"; sha256="0a9kx8d0aqv526kk26060afl5mydj8xdkh3vv1r1v820niqgyd32"; depends=[]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.10.0"; sha256="1z3hg18my8sv8q9x0k4kpcq75fm73id1ak30zq1rqrscdvysk2wn"; depends=[annotate Biobase hgu133a_db]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.0.2"; sha256="15pdm6y6gaia5yv4xg1yjmyqwhak49fzl5v9y0mb2gsn6nb2ajs0"; depends=[Chicago]; }; + PGPC = derive2 { name="PGPC"; version="1.0.2"; sha256="0q6s3km9d8sjzhbz1yxyadcnfq3gc8aav9hgp886ri7jcm5ddh14"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.12.0"; sha256="0q4857a0i0a77ff139j57m6i5p71hg9gz24ln97hc4zrxcp3qbh6"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.6.0"; sha256="0has8xd86qh5042c5kx63py8b2bqsxy1xmn12gr7wv0r1wlkzylh"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.6.0"; sha256="1l0806ihhba3rl6ck1xrb2jqx77jsl4c2ksph5a0dc8zccsdln94"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.6.0"; sha256="1j55797xdw1bwy0z0md4swyn87lki5y1qcnp7mcxfdvvq4371vm4"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.0.2"; sha256="0h867v5vrcwaibybqf8przk4d2l286bwbc0rg1863kdq63qhxpls"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.8.0"; sha256="0wxixfjdskcqpy6nr2bfjggjd40jlzq31y50k5x0ccbhkkf60lrv"; depends=[]; }; + ProData = derive2 { name="ProData"; version="1.10.0"; sha256="1fkh3arikrwzllqn83x5v71b5x0nm31fy1xr2sldln1qif583mcn"; depends=[Biobase]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.2.0"; sha256="13d8zwgwv22nhi96yypk87m35yhf256aslxhx682awi40lacljr1"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.2.0"; sha256="0v5j0nfy0k0jkgd2mxc7ya0bfagcrl7ck72crz3959bh70vglvdg"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.0.2"; sha256="1q99mhlk08x9y68pyjv9wjrdvg58qzvfsxg1alrilyh243zr2nsn"; depends=[]; }; + RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.8.0"; sha256="1i5mwj837ppmildrbsq38iqbmhgphbz18vin7qj03axxg29lkwxm"; depends=[RIPSeeker]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.10.0"; sha256="113x5dq02krdv3i1vlziqiwvvpnwg7mmmarsysjnjad539gklfvy"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.10.0"; sha256="0b3gfhm5b4s044j78lq81jj3pq7w7ycxh466xnlxilaqyw7g0ydl"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.10.0"; sha256="016wrjr539an4hygb53schaypbsivnk6asrwywhjlxb0cjwszwvy"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="0.106.0"; sha256="08knas04hnhm54ya6nqhzv86q12gfjfynjqpy3d63s13r25pn4xk"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.0.2"; sha256="0yq6yig0xx0lzcqz1adb78swmy1jwb18hqp1x1xvnqf7c9jffv2a"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.0.2"; sha256="0mkwa1w6qzp1kzjg8y0vs09vq5yy0alf5v56cg64qg83yjb2153l"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.0.2"; sha256="0h95prind9ydyc2yj9m5ay6m7jx8fi3ay42j37px3gb0l4zmb1ph"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.2.2"; sha256="0dyr95s50cgw5xczczlaiba1hbc6x4gn03bq3zffcss3kwwzrhqy"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.0.2"; sha256="031g8pllcyyn7ayd2qy3yyq3ny39snnk86r6dy44n53a7wixvaap"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.0.2"; sha256="1nzyl6ny4vvgpxy891icy6smwi24li67k4nwzm7vwkbxq25lkgvy"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.0.2"; sha256="16yqlr2ml4hg6kz5740nxl10jkgs4d3mvm4gj2lb8qg3mji0xw77"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.2.2"; sha256="0mdj5aqxrhpwcxp2i6m9xxp808v73b3gr59ymnfsvh8pyf6929p8"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.2.2"; sha256="1wsvyrs738qz55x41byhsqrnxp3w18qibxwmmsymkgx065rlnn7p"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.106.0"; sha256="065vc1dhka15zzlpl84j4y619wifn7gh31i3yjqds0bgkzj5ppz8"; depends=[Biobase]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.10.2"; sha256="07snpj844hbr1g9ciq06s75w6pcjr4j70ssg85wr3igas1zmkz85"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.4.0"; sha256="0k3k116ncw3l8fjkilbgydpp3wwj9341f7zmm67wv3mr06s43hdl"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.4.0"; sha256="0jmyxbdw7jj16d9p2p5kf5bc1jgdcq4w7nfca2bdsmn7q3lyq0yp"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.4.0"; sha256="00rj7kab8n32hxbw5682xxzrwrc91hdq1068z9bcvb52z0bsiyb2"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.4.0"; sha256="1513z6xka9gx3gmykc40p0xh33i4jbpw8j4l6h0bs6h25fsarqhc"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.4.0"; sha256="1f16sb6mazcs184wrpwkgbz6zkbk6k79pawn7ip1rsjma9p1sgqp"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.4.2"; sha256="127hc0wkpjssmnwqj4zzlbv7glznsc5g3qfsmx4slzf983i3hdbi"; depends=[edgeR]; }; + RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.10.0"; sha256="0ci771xdjyjxidkra0lcbpnnqghbk9ycvllpxla3lw5h608wgb4m"; depends=[easyRNASeq]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.4.0"; sha256="0jpx7m38gl38r54b0652rxvbma61gzmki28j373g3ns4f4xxf7ph"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.18.0"; sha256="11bvbzxcvg5s3f9cl44cpwnb2php8qkfmlvzpw829wb6k2pk5ha9"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.8.0"; sha256="0qy6rwsggd4cyvci9ng1l8kjpcv79hhqndvv6zpwnvh7ng9f0x5d"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.2.2"; sha256="0r4kanaq96xppyhjy2hnss42ckn8mac9gwpyak64ywwvq30wl12m"; depends=[]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.4.0"; sha256="0lwdr0zpq3m0fqwijfgnm4jky8wg5pakrlpfgdhff01i9x4dh8bb"; depends=[]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.0.2"; sha256="0vpa4a43h39hl8jx465kbypird4bh2ry5dyz3pyrf483j2wlmwjd"; depends=[]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.10.0"; sha256="1f2m9rdfczlsn4nvyj5m5qhy1zg08y5ajblqc4r2r6gh8y8vpqyi"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.8.2"; sha256="0kdngwd3b9vb698rpfmbirbi6wa70p3sp41z2q92fjlvv9lmv7b4"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.14.0"; sha256="1wrfz7sl1gdqpps54k8dy2r5444jajbkg66br6pjf78s4qh555sg"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.12.0"; sha256="0r9cknnazvp8rl7a0aynh5lpb1lq69d3s8jz84wafj2mdddr3m46"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.8.0"; sha256="1950l0fwf23p62v0sgh0mjyisa9cnf0wjplx4x368l30jxgx8ag8"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.8.0"; sha256="18hzf0sz089dpay1c4abp1wwi680gbp1cnz32rm40fgadaxv60ga"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.106.0"; sha256="0j87h53l2by6rx0r452s3vyf1987p23zgdybgyblwhdjgiddizc0"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.106.0"; sha256="1207h52ccs7rv4dpp87xmsdgyl841zxrnzg4wh55v8kcqnk08ly9"; depends=[Biobase]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.8.0"; sha256="1mb3b14qa4b0cbzxlkn4c5rihp1niz98qdd3kmmj9w3q0fllymxa"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.10.0"; sha256="1vyphhfz6lnyh19qid7m5d1j8lmwzda89bq58r5anz2dk2m7rg2s"; depends=[TargetSearch]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.2.2"; sha256="08i0qnp7fhpg1y5xdckrwxh2mzyxrv2s44z5vs1ldr2wlx4y244p"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.4.0"; sha256="07kh15dyqhb867y93g3ymcr346l69p30sikfm30dvhq16ckrg9jm"; depends=[]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.10.0"; sha256="08zhxkg5h1g13l3p17idzcyz34qbpr6yvvl8qzkfgnm0ipcd35dv"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + affycompData = derive2 { name="affycompData"; version="1.10.0"; sha256="12dmv99m7iy0wrzsk9h2j8ibby0shfxlyk02kk9312rlnyf7qb6g"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.20.0"; sha256="1wg3kxvlzqwf40wrkz69szrcyv4fr0fml42qqfcw7qy1m3skp1hi"; depends=[affy]; }; + airway = derive2 { name="airway"; version="0.106.2"; sha256="1yidngcxv2sma29l5k9zpjhfbawk2wb62w7ik0gbjxw9sdacpk0v"; depends=[SummarizedExperiment]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.8.0"; sha256="07kccp1qhhmskpymvllz9l5a4r1ml8wzww0ik82653pibsjr5zy7"; depends=[Biobase]; }; + bcellViper = derive2 { name="bcellViper"; version="1.8.0"; sha256="05bvnx7ji27r115ih4k00pqb2zvfg9cj6hsr03yszp7cmhdjw752"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.10.0"; sha256="1gvq1f95yy9x8nx5hj20c884xcl6zqhsmc39pdzhmdgclfr07p6i"; depends=[beadarray Biobase]; }; + beta7 = derive2 { name="beta7"; version="1.10.0"; sha256="1vry0dbwjvzynb9bgxr8vnpaqby6kb8am2fc230hswqmwm6yjgkq"; depends=[marray]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.10.0"; sha256="06f8gx1gmkn520ca17z5a03j9f5f4bz00ggy51ygl9zlb7ib56si"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="0.106.0"; sha256="1d9x37wdnhcx6q5qipf4y74pr8585wwlz7xdq7dmfcrghsgd23qi"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.10.0"; sha256="1ry4issbkfk761sc1mjhg46hk7j5yb4kidvpgh9nnid807zyqrfp"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.10.0"; sha256="1wml4q5m83ak1zagpjlbwy7fzap7dli0rnpjanyk3dqrl79pp77c"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.10.0"; sha256="0iyb8dvz4l7rvaam2xnyvgmg4n5zak5w6jhzqyc1dy29hhy55rjv"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.10.0"; sha256="04av31c737ggq268rc84z89hhfv3pqrxkjlbbwhrl2qmcc0hh9fl"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.10.0"; sha256="1cdx855ai6qrzq49l57x9nl58jpixnpp97cmfzys8n7kb2dn963h"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.10.0"; sha256="0q1ann7mhgxlyikb4nprzhy2mm6g8fgfbb2kyczi7sshrh6h4qba"; depends=[]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.10.0"; sha256="1r6p4ysr6ahwlwi0hhla6fb8cmnmgbssbqhrizqsid1f7di77n6b"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.10.0"; sha256="196bbxl1p31g9kpm448642a0gx8dyng8r98gn53pxmdpp2hq5yxl"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.8.0"; sha256="0pnym9c0pipag2kr7j6b7c3dhhhav7z508avv4aj6f4wcagb4yrp"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.10.0"; sha256="0388634p3j33vz8dw5i2j2y3n9w9h2diw3qsnqcar4w7d97grd9v"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.10.0"; sha256="04h212d5j963xm5l1hpdb901njfrfkp1qdy12ndlrph010kpk6mv"; depends=[affy Biobase Ringo topGO]; }; + ceu1kg = derive2 { name="ceu1kg"; version="0.10.0"; sha256="05dvfjpf93cl8g1caypzk84k73z6vmam91x3rh16r1fw4i3sj2i7"; depends=[Biobase GGBase GGtools]; }; + ceu1kgv = derive2 { name="ceu1kgv"; version="0.14.0"; sha256="0ah88kr9rc6g4n7d800dxaarpliy443zpd7innbmrm02xq4yjn6g"; depends=[Biobase GGBase]; }; + ceuhm3 = derive2 { name="ceuhm3"; version="0.10.0"; sha256="07pzhj9b4b4zpcfg8fjlzh53yr6pzwnfv7m7cks55x47l8bpv1d8"; depends=[Biobase GGBase GGtools]; }; + cgdv17 = derive2 { name="cgdv17"; version="0.10.0"; sha256="0rjx8jn1m9h5p982c336bza9liyv5wymgigbr7dar91y89a0pmpg"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; + charmData = derive2 { name="charmData"; version="1.8.0"; sha256="0b8ka779s0p0byjn8vxbygwbr2w11g5mflgzyi4qh4dvjh84sri7"; depends=[charm pd_charm_hg18_example]; }; + cheung2010 = derive2 { name="cheung2010"; version="0.10.0"; sha256="1ibwajsyggi14vscb27kr3zg8vnqrswsiphv5cdsfnapna9n5r5k"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="1.8.0"; sha256="1nq7a4kf4nybwm9k2szccn5678agfc4zy38375f44ca8b40481x9"; depends=[BiocGenerics GenomicRanges IRanges]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.8.0"; sha256="17kfdidwvj02kcf4pvkypmx7zhyl1dafxw1j32vzvb1rm50m770b"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.14.0"; sha256="1zsk2p0q18l2nfbjgyp7h88ci3rqavnx18vkvgzp1sd4zfc2q7m4"; depends=[Biobase]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.8.0"; sha256="0dvr1qzjknjaq4wicihdzdlk2scj43bx89p5vshvnx5238pc0ya7"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="1.4.0"; sha256="0nm87q0x7jp2xzmw4lc3q4xa77nkjyfjzx7xnj72d9q1ph79rnyd"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.4.0"; sha256="0xw2fda03sfh9x8qdqvp0r5g06jawidjvw2139kgn3lkh000mffb"; depends=[BiocGenerics nlme]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.10.0"; sha256="1wgf366krp6zv950giw1s5am9wi54zyvh5qkyn5ff85s6nshx7xf"; depends=[affy BiocGenerics]; }; + davidTiling = derive2 { name="davidTiling"; version="1.12.0"; sha256="0hw2im7in8h49w41k528lwzb1jvdj1q1pvdlsf5n3h4dm8j2yccv"; depends=[Biobase GO_db tilingArray]; }; + derfinderData = derive2 { name="derfinderData"; version="0.106.2"; sha256="0drjk0gazg071z794d6hp88rgvl1913cchrbi23gkplrfvpqdka0"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.0.2"; sha256="06vc1mgyq9bzx0bkadzzmh9qjfjpwi1hz7cjnzh78afkyn6xsm25"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.4.0"; sha256="0rjjh8p58wcpvyliixnrjys4s6r6kriinrk3h0vjr1f7ljb2zci5"; depends=[Biobase viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.10.0"; sha256="05vsyp4xmpi3374xlama9bi720hns0c0lfl2094pn720mwlzm784"; depends=[Biobase]; }; + dsQTL = derive2 { name="dsQTL"; version="0.10.0"; sha256="1jkg3j8gclm7c8dc2620dvy91z0j7p02nswb4v52p377g3v90pw1"; depends=[Biobase GGBase SummarizedExperiment]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.12.0"; sha256="1iqhbzx5dggch34h87g189ldppv3axjmi60vi5cmfl0ngwh7gkyv"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.12.0"; sha256="1g0diwj1ihqw10rfgw2rp7vfnjrknkgmqm9l5snxcsszkqn11ipl"; depends=[affy ecolicdf]; }; + encoDnaseI = derive2 { name="encoDnaseI"; version="0.10.0"; sha256="1ka2m4i6f6wccfrkjzcjgygxmpkf9xfyh1cykzh9zrjc3305pyjd"; depends=[Biobase GGBase GGtools lattice]; }; + estrogen = derive2 { name="estrogen"; version="1.18.0"; sha256="0kimcb33jsanysl60dhmyhz4201f33ni8ap3wk4ikplf3s619l8j"; depends=[affy]; }; + etec16s = derive2 { name="etec16s"; version="1.0.0"; sha256="07ngasmbqiipkxy23kdpjbi72n3mjfk4wkad52sli48s3hh2xssa"; depends=[Biobase metagenomeSeq]; }; + faahKO = derive2 { name="faahKO"; version="1.12.0"; sha256="1sx6jdkv8i1d4lpl4kv2d3c0gk2cycs0gzykngyvz8yap911i82y"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.10.0"; sha256="0m51rnsgh4wrq69rpc1i4cn69jvab4y0ib4sr6kpdh8mqrb17n0k"; depends=[Biobase]; }; + facopy_annot = derive2 { name="facopy.annot"; version="0.106.0"; sha256="1bfsnqlcb8lq351anaq1bc2hgzpdsavzpsh81sr7pq0kpinkn35i"; depends=[]; }; + facsDorit = derive2 { name="facsDorit"; version="1.14.0"; sha256="0am46a770gvm0qjb0ah2gbm28yjazg2dfrdagywvyiaadj68krrk"; depends=[prada]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.10.0"; sha256="14mfsjgqxrmcf8y9n47yix9qgbi437636978nd2gxggahhvx45z8"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.14.0"; sha256="0h6dj4ypwvxi9137mzpzsymw0dkgral0d3fvh8via8l0vkzhxq81"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="0.106.2"; sha256="0x43py9445w5hw4z9s2br7k2lqlr988bchaw7qjll6qhm5xrbip0"; depends=[SummarizedExperiment]; }; + flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.8.0"; sha256="02dlkyl9zxqy4cns9mrgf98zspzc5ks1qajbg8vy4fnrphykbp0v"; depends=[flowCore]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.8.0"; sha256="063wq1nv9f3z014qhcq8a060q5n1yxc99knh12vd1kl8blbanjvn"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.8.0"; sha256="1mwyx3xyz82xg9ymyqsiy2iqpcfgw471pmbfd489y15rb7jdl2rh"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.0.2"; sha256="0j1zvdm7g3f0m8y58izbrkmpsjxi0sx4h24qlbmglj2xhhh34b9i"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.10.0"; sha256="17nr1kfn2r5zhwd7sj01iv7wv3rw8bj3dpfm9x4bsg2pby93i2wl"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.10.0"; sha256="1aaxy1iayi10k7pj4s3jfx7dss929ll11zvps1xcbiz1wfhk9163"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.12.0"; sha256="14a2kvg95zvq4ij8adqihr7ajckgzg76y3r1c7bbyd4b46h96l1x"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.10.0"; sha256="139ig58xnds081q8azkkzpp1mb22xx9cz0m38lpw0xl69ny1h8mv"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.8.0"; sha256="10ynnx2r8snnffhwnj620z7blfy4af8rm1il6qy4g7dgs0cx7a4l"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.4.2"; sha256="1zl7gg144fs7zfycsmq5492sm1bqy7l527xbc2zj04schd9wsan2"; depends=[]; }; + geuvPack = derive2 { name="geuvPack"; version="1.4.0"; sha256="1jplp7fgcjayvxzrzxxgdwdb89k5jw4xflbjb71mrai11p8za546"; depends=[SummarizedExperiment]; }; + geuvStore = derive2 { name="geuvStore"; version="1.4.2"; sha256="0svfj6axbfyyhwx1v8dpmla9a8f31pq3psqd72zkpgqh25q7zyrn"; depends=[BatchJobs BiocGenerics GenomicRanges gQTLBase]; }; + geuvStore2 = derive2 { name="geuvStore2"; version="1.2.2"; sha256="0dhdf2a10la9vm5vcvdxrzh50va4343h57vvc8711wbris0hqfcr"; depends=[BatchJobs GenomicRanges gQTLBase]; }; + golubEsets = derive2 { name="golubEsets"; version="1.14.0"; sha256="1a1ccsx7jfcgpjmhrdpnysrsa3b7r807vkgsrkri11pidf79kbc2"; depends=[Biobase]; }; + grndata = derive2 { name="grndata"; version="1.4.2"; sha256="0ivddlxc2xd6ncwignrxkp2cy81k17wav42g8m0pjb7ck6qaak6l"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.3.0"; sha256="16yisw86zhvanigcq9zlxk3wsqdln8cwslija5s8mq68srffc3q4"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="1.106.0"; sha256="00m3l1wwvff3w3nxdbk7sn22i7p2ikdr1mrd5x6f7jbihzii5zdq"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.14.0"; sha256="1rpglhfy3q1m5l54wjir1nsyzqxpp1h1112gyvdxkxdv4jsxfmd2"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.14.0"; sha256="1lq1na4v1v2pd96nn59kppiaga9w8ib85qndbv5id0q8fh11xmsf"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.14.0"; sha256="1b7pyp4nqp7qkjv5zjvn8q3ha7jn8fk410y50j9vhl147jwfir98"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.14.0"; sha256="1cnkvc2miv4gw3gqg0avjdi19vhrpa7b24wm9fdz7ynasi164qqa"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.14.0"; sha256="0yylk76s1n9n9yj04726pzs9fx10gng146s4zpbpb2qk14kj0zfr"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.14.0"; sha256="0d06wzcrawssamh48ncvys1v0r1iqfg88vf8nx9hbjlyi8a8lw33"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.10.0"; sha256="0rpbv423fp7scgkdws6s467a97mv2g4ami3zx0x8p5786ywiv42y"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.10.0"; sha256="1hmpvgapf75wiwvc4c68k1wglhg04zka51m3fyzsbqqg23g8a8zv"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.10.0"; sha256="1zckhwi7wjns9plp3r7w5v0lv3syydlf0akzgarl5fz28nbjxy42"; depends=[]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.10.0"; sha256="02kacr0qkvvh6bx69pmkp6n1y1q6jvizf8dqcdp72bxzav9m2pgc"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.12.0"; sha256="056p5lmqmady3yaif7flvd266i3a6b1z8vycjfq44zxd4dccdm8m"; depends=[]; }; + hmyriB36 = derive2 { name="hmyriB36"; version="1.8.0"; sha256="1v1gbfg9sqpxlkk4qjrdh09yggqcq0xl32f845iiaxfizsj3xlh0"; depends=[Biobase GGBase]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.12.0"; sha256="1l2q09i3pl49dp2wksmj8dh81lvly09ldm8ixzz89wz5f39d2bff"; depends=[Biobase hgu133plus2_db]; }; + ind1KG = derive2 { name="ind1KG"; version="0.9.0"; sha256="02f25djy7zxh7d88v00jhpr1f5wa2ijskg5w9i90r2llwssjxx97"; depends=[chopsticks]; }; + iontreeData = derive2 { name="iontreeData"; version="1.8.0"; sha256="1xmbs8vicz7p01bk4xh8lvgdflzhybwfblpx8pdsvbkv5vz3rhkb"; depends=[]; }; + kidpack = derive2 { name="kidpack"; version="1.14.0"; sha256="0lxbi4sn4g68s23kcyaxpxdi6dpz7w3cz7i5n6x9ywa12mbnxzgs"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.8.0"; sha256="0bkah146rpvw1kh1r9j8rqjwh07bv5vhy3pc8gca4ssvn1l77js4"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.8.0"; sha256="1kvbk2j385c9jajdvgbpaq0rv8p9nid76fvjpkk2a4babbvbk5f0"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.12.0"; sha256="07vbrzyd3ihc2b3s5rs538pbq3gm1mqm2xywclx2agm4n318dbbi"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.10.0"; sha256="1nhph1ljbj0z22rh9c0dcljrddgnydhhghpah9fp8qv0hbjlzl1x"; depends=[Biobase]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.4.2"; sha256="0qn6j547i2d3rndpxb0rwvk9q5i0qkc3nm4gmmpipd34hz9g7yh1"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.8.0"; sha256="1ybc3zrylvwlbzyl5nrzgsfrzfqx5yqhair3x5sansdhrsmc383d"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.16.0"; sha256="12v51x33dmj591yhnrgbpvp1v55gkkwmi1r12niprkkzdy5q3jn6"; depends=[]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.8.0"; sha256="0d79080kmna8zckadbgjgfc4hyxnqsb6pirhjyf015z3qq3w7h3l"; depends=[]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.10.0"; sha256="0hycvsh3m96aqr888vq14y38r9dj1gdn3nhmvl77rsn19bn7lryp"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.2.0"; sha256="1zl65i127p04vlbx9wy7jmrvbdh679j8sz7qxlvmcbsmbxx43dm2"; depends=[]; }; + minfiData = derive2 { name="minfiData"; version="0.14.0"; sha256="0w4gwk70ka6kic7dy7qfsb9nd791mf5gwr35x3cw7jqi6gdlh29q"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.2.2"; sha256="0j0jygm9nnw6zjh99l21yncddnqp93pfjsikjv80vlap8bhdndcy"; depends=[]; }; + mitoODEdata = derive2 { name="mitoODEdata"; version="1.8.0"; sha256="1ffjvsw4rj76fa39r51fvhh7xx12zsjxww9p5spg5b8alxd40f6h"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.10.0"; sha256="1r99ig2w8006zzmckcwl9b1831qya1a33z3k1vw88nwakjib5had"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.10.0"; sha256="0c8zzbqd4d70fw6xfmnmcs8wfxffy4q5jdibbv58wxyszvvs2215"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="0.106.0"; sha256="0mii809mrh4h8whas47x32xn5xbslirhf28bi641k7c4yfay4bha"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.10.0"; sha256="1m8mg19qqv5pmqchjgqk6vbljimg6iw8caz44vj6095pxzjs78cl"; depends=[]; }; + msqc1 = derive2 { name="msqc1"; version="1.0.2"; sha256="1s27aasqy93iscdqla7jdfg12i8fwwq4gb30pnv8g9amrx3ag7a7"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.2.2"; sha256="12l6f7k48ga1kq51svjgz1xw888bpqigm2ry774yv22pi01kq038"; depends=[]; }; + mvoutData = derive2 { name="mvoutData"; version="1.8.0"; sha256="1d6kj8fjh401z0bbqbyy7r509aim63srh0xihhnf8k0v4hnxb2y4"; depends=[affy Biobase lumi]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.10.0"; sha256="1v0chfpji5pjaq5pfca6d80nqq4rzfm4078i9jmcwzlbsdkpwh63"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.10.0"; sha256="1ynmw06cj2jy61vy6pfjxx2yfmbqh5ks449zg2an02algc7cmhk6"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="0.12.0"; sha256="128bq3gk8af8c6lyxbzisyqmal0s1vd73rzsf0w1cj46riwb81ya"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.10.0"; sha256="071zjb0w6fqwaijkkj6g56wbf7xq2d1a7am4lzmfx1s4rrqlpxk3"; depends=[]; }; + pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.8.1"; sha256="1q1wq5zff2qcqw5i86rrdvlf2y7n87xlcpf6grrahnh3dc8nf42z"; depends=[]; }; + pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.8.1"; sha256="1ln4nnb92wvg84m3haczc390c7d1xm7qbiklvv1yp5f7saqglix9"; depends=[]; }; + pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.8.1"; sha256="1d9sv8m4yi15zyjb3j3iva2530nzfwfb180qqm0v9zj3xqxfarnv"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.10.0"; sha256="11gj7mxx5k28ymdsf13132xy1bwablhp98wk5rx32833gx2cfafc"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="0.106.2"; sha256="0gipg8j40966wvqyk77xldfqlcs891g1m47vym63s878lzz87ifm"; depends=[GenomicRanges]; }; + ppiData = derive2 { name="ppiData"; version="0.10.0"; sha256="1v6cgbdlp6dhb4vajp8ck7gpz2hbdzs8qc621xmiyslv7v03w5p8"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.8.0"; sha256="1cx3f99z886c7z83w35pvcw98lq2zkw27qrd4mgsi95qh1z8yz5w"; depends=[]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.0.0"; sha256="1d91m8mgq70s26lh3q9jdsa0fgv3p84wvbrvz2vd8r5z5vpph8jv"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.0.0"; sha256="0kiy78nyk420055m81zdiv5m9iwrw1s7bpn4mwdkjfd45klzv9vh"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.0.0"; sha256="13vcfyrl3958wkra6mp2w18q1d3yjcgb0ml8xasqnbicwiv3193y"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.0.0"; sha256="0q0n2blq1d7x20d08621gvcc2s96n0a1h0nwl7lcdb3alk0a3vmd"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.0.0"; sha256="0a94q06vfwmkq687gc4y3h974psq18f9rrpphldv7sscgx7dfniq"; depends=[Biobase]; }; + pumadata = derive2 { name="pumadata"; version="2.8.0"; sha256="1gkfchlr4s8rlfqi6cc3l1n7ppzihlifc7jqvk15vhz6lsrsv0sx"; depends=[affy Biobase oligo puma]; }; + rRDPData = derive2 { name="rRDPData"; version="0.106.0"; sha256="0pbn1aklw2x8yagj65436601drd81fklsgc7kwg8wrr519nb8mjq"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="1.4.2"; sha256="1bsh3i6cfyvg6drl7jz3k53g3bqcr6iz3gc5wb9kcbnvfxa6rzg5"; depends=[Biobase]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.10.0"; sha256="1c77rz7bir6rfsmry7f6bn4pzaqpwy178v8hkbkf9l6jskf29yy2"; depends=[]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.4.0"; sha256="0ysc83rcciq8isb834wfvz3iwvwa7xky28b4nvyhskblgb7d0ahp"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.8.0"; sha256="08d9by2grfpyl6xc137hax10nk8mjdpakg49richcr3g0yql719a"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.6.0"; sha256="1715vwd5y4pbll271ka0vszj7b4sb0z6xpv2vpkqilw71axwsj7n"; depends=[]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.8.1"; sha256="0h34yqcazpzh9scp0xpyil33fr10zx67slpn3c3m3vvi8g9aw2n1"; depends=[]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.8.0"; sha256="16ymh2r6g0kficrg2dnlf5hlixbzmi83vz2djxn4w7ws0bm67dfa"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="0.106.0"; sha256="18r8syb5glkaj6xdwqg1yqwg6lmz4w8z72394zkx58zcirpbdvnw"; depends=[]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.8.0"; sha256="0l52c7ps0yi7wmjbnl5hf5blm5wizgk0j9qfsz5dli7xp88fhjq5"; depends=[]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.8.0"; sha256="0llcpgp325hzjjhk05l9yhmfsksr6i4sxqvik7b80jd1978wklxm"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.12.0"; sha256="1fya1ma1yi5426l6m4hgisyg54y1pa7j86q5kn0dzibhijn7is4d"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.10.0"; sha256="0pnvl1bhfxa6s94csgzbnkfgbryd8yk4x8619794cdgvbxkfy11l"; depends=[synapter]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.2.4"; sha256="00difbsafgzxw2n7k5d5rf50sjahrxxdqv65a1vl7ij5vkv1fg6f"; depends=[BiocGenerics]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.10.0"; sha256="1ang51lcj9vm1jx2hxm1dmgpl9gii9gkjzcvy0kik5ljkzwp5m6b"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.10.0"; sha256="018xp85f8k1m59vf6yymba5nx1cgq2v3jg029gj2i2k63d59iwx1"; depends=[AnnotationDbi]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.0.2"; sha256="1kkl337qpipxbq99k2s84398pdfi1mmzddvwj5g3ni95ibgppipz"; depends=[]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.10.0"; sha256="0hcg3d55lklfkqbrbir3q9qsbb3r9nqk3g2qmipjfa1s16vdbmvj"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.0.2"; sha256="1my9afgaazmh8rif298iym9hw0ld9iy18fbz78p5qxxr016j1vqz"; depends=[]; }; + waveTilingData = derive2 { name="waveTilingData"; version="1.8.0"; sha256="0qc512xw3mpmx3dchwlpp8wsapk9jghnfgpq7f6332592r9dsr5k"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.12.0"; sha256="0j90r5mhx44x85n42a5ljyhk5xs7mpjjckrqgc5y5rlbas3922jm"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.18.0"; sha256="1cpn0jwxlpzyv3fjg72z87wfc6l3l39yzdkyyaqkwk55fqgzgg24"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.10.0"; sha256="1dfdi86qdpcx62hpmdrkhw4qcs9nnsyn3pf8535ky9g9x9004p2m"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.8.0"; sha256="15cmh17lzmbby3z028wrd90aycd64r70i9r15lffvkbp7f443q63"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.10.0"; sha256="1xj2bszfyzm440nf0w4gbskh1j0lbzqdhr0c88ilppmmbfmgv9nq"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.14.0"; sha256="1a0811vzim9cv3p37s6hbd4pqvzf4xnzi53w0kc5wrc8mz1634aa"; depends=[Biobase GGBase]; }; + yriMulti = derive2 { name="yriMulti"; version="0.0.9"; sha256="0v984z7bvqzpsj0d0zw1dqi6zavv3s5mgx7p2sbm433wfk1jjs0a"; depends=[dsQTL GenomicRanges geuvPack gQTLBase Homo_sapiens SummarizedExperiment]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.106.2"; sha256="0v3j968815jwcxpj11hml5z6a06kcgvmh8lz539c2nryixr5dj53"; depends=[]; }; } diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 391de183df6..7d5db5a744a 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -4,1110 +4,1217 @@ # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.2"; }; +let derive2 = derive { rVersion = "3.3"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.0.0"; sha256="0mxw5s4cfh9dhlwm485n3x7wf81hww1353ilz1zy1wvjx0dacb99"; depends=[ABAData gplots Rcpp]; }; - ABSSeq = derive2 { name="ABSSeq"; version="1.6.1"; sha256="0cqscx7mxady04k3f4s24rbx961sj95i2wwysxkcc0a9my25sqfg"; depends=[limma locfit]; }; - ABarray = derive2 { name="ABarray"; version="1.38.0"; sha256="15zdfwpi3hgadydxlsksr7gh7wg577qcwp47zm8mxh28mcl9l048"; depends=[Biobase multtest]; }; - ACME = derive2 { name="ACME"; version="2.26.0"; sha256="020cfccwkpk5w8xpg3xn2pcrksda67r4yg6im2qlljqrmaijjb9k"; depends=[Biobase BiocGenerics]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.10.0"; sha256="11hhmap9f8iqcxf4n4didb6isswjqdwwdc1yfm2056mcgny16r91"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; - AGDEX = derive2 { name="AGDEX"; version="1.18.0"; sha256="0hy5kl6j8hx10a03x44lqij0j7bkg4rx5lf5aicx0mrd1g59b6w1"; depends=[Biobase GSEABase]; }; - AIMS = derive2 { name="AIMS"; version="1.2.0"; sha256="14xpa2590rkqbmq8kfm356syas117342pn1wah67mb9r45klipb9"; depends=[Biobase e1071]; }; - ALDEx2 = derive2 { name="ALDEx2"; version="1.2.0"; sha256="0p59g70472b11ab1ggzxb7l6rg5sxmb8nk47b5z4qb1lf0a0x576"; depends=[GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.10.0"; sha256="11qhbvgyimfnclmn7jyl9rsvkphh854a28d29rr6fc6gvmns7y40"; depends=[ARRmData]; }; - ASEB = derive2 { name="ASEB"; version="1.14.0"; sha256="1wr7n250gv1xmnkp5xvbvc3ccwm3ffdj63bj5ifarphb4xs16kf6"; depends=[]; }; - ASGSCA = derive2 { name="ASGSCA"; version="1.4.0"; sha256="1xp7g1vhvk4m3z88pnnchjxk03q5vadrvzrb1p5rys6svfk4z9vp"; depends=[MASS Matrix]; }; - ASSET = derive2 { name="ASSET"; version="1.8.0"; sha256="17pswg3babj454rr6hcnk8k3bgm9rcw2zn8yvvd1jx79bairz47p"; depends=[MASS msm rmeta]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.6.0"; sha256="1kmm72vlxlx8nk6xd1akm9bmkmqmmazxgixjjarwp2r8drhv8447"; depends=[gplots msm Rlab]; }; - AffyCompatible = derive2 { name="AffyCompatible"; version="1.30.0"; sha256="1qw741j4d9b7bczjz3s72a9d0dcxbh5a2raak3ggwmz72p53axfz"; depends=[Biostrings RCurl XML]; }; - AffyExpress = derive2 { name="AffyExpress"; version="1.36.0"; sha256="186gc8c3bj070zvwyy4vz44wx1r85bbmil78b6m9kvwp6q1856d7"; depends=[affy limma]; }; - AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.16.0"; sha256="122v40vq7pzl1qlycv8rvsq3r9ialkvsa8qm5drybf5f4nlk6wm8"; depends=[affy]; }; - AffyTiling = derive2 { name="AffyTiling"; version="1.28.0"; sha256="08n1w64yk1pxb9d8dpa86y3mqxrsvyq0gsfzlsqg6fz8jz497fhr"; depends=[affxparser affy preprocessCore]; }; - AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.20.0"; sha256="1pb0491rgcjfnnv4xmf73bdawiggi4872w238qlf96i9a9r0gik2"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.8.1"; sha256="1410sr3xfjwz7szl9w17h9n03im3wd9w1q25cnlyg4ipmp2xc89h"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges lattice Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; - AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.4.1"; sha256="0zq0h9abswvhkpgb6f966rhgj7lh02aykq88fphxfv9zzkjfxbjp"; depends=[Biobase graph log4r rjson]; }; - AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.32.3"; sha256="1v6x62hgys5827yg2xayjrd9xawbayzm6wy0q4vxh1s6yxc9bklj"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.12.2"; sha256="0dybwq4v6f99w5v2hg519wc3y01i1hq1jd250dkj9976y8lhx0b8"; depends=[AnnotationDbi Biobase BiocGenerics DBI org_Hs_eg_db RSQLite S4Vectors]; }; - AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.20.0"; sha256="03rznpbsgq3pdh0id35vp8984f57ws2jpb0cww1qxglf967gy028"; depends=[AnnotationDbi]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.2.5"; sha256="11vyppg8zgfdd6s7457991l7j6l7jd4p2ah1m89bg226pakfi552"; depends=[AnnotationDbi BiocGenerics BiocInstaller httr interactiveDisplayBase RSQLite S4Vectors]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.0.2"; sha256="1d2xisxzn0cic5p5412zks5chr16g9xj159kxpkkqk1wvif6im33"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery httr IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML xml2]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.30.1"; sha256="09z680q1l8fp2y389n6ik8mjymqn688j333c5fgdpmdqg1z5acx4"; depends=[Biobase limma oligo XML]; }; - ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.20.0"; sha256="00a5h3nwwhi9phrys2gj0ba8a24iqxk09licb0jn1qzdz9mrfxmq"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; - ArrayTV = derive2 { name="ArrayTV"; version="1.8.0"; sha256="0ny5x2w0n3di5wzywfngsfdxaciczs24cnbvk75mv6hf4bdwfp74"; depends=[DNAcopy foreach oligoClasses]; }; - ArrayTools = derive2 { name="ArrayTools"; version="1.30.0"; sha256="168llqk8w1b54xy0ijg0m8mzcwggawkdr4s7abi2fv4q5007s1jv"; depends=[affy Biobase limma xtable]; }; - AtlasRDF = derive2 { name="AtlasRDF"; version="1.6.0"; sha256="16hgw47px7ig6hrm90y5nzy3dgdfm5my58bli20aj6dhnh2yvhxd"; depends=[hash SPARQL]; }; - BAC = derive2 { name="BAC"; version="1.30.0"; sha256="1yrw01m8fd54v352pcb7904f8wi3il83nx8ywf6m968x33y2npxn"; depends=[]; }; - BADER = derive2 { name="BADER"; version="1.8.0"; sha256="0zw02zrxl9587qkfy6ayhqx66rqk9i80g9zgcywa69npr439qrmh"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.10.0"; sha256="00absrj8rlwcfa4pv3fhmb0561b2rxmr8c7lqq8jc5sncw8bay51"; depends=[Biobase breastCancerVDX]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.0.0"; sha256="12r0pn3nn6q725qrrwzmmzg6x58kqr89s3b536ld11jp4081yb6c"; depends=[Rsamtools VariantAnnotation]; }; - BCRANK = derive2 { name="BCRANK"; version="1.32.0"; sha256="14akhngl88ywirpax984vwmzg5rp57034g2kdy0sz5x283mcmav6"; depends=[Biostrings]; }; - BEAT = derive2 { name="BEAT"; version="1.8.0"; sha256="1amk6812hy56j22mdmjxjpiak60cv59plz9j7gar3nr9g6yl3c7p"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="1.2.0"; sha256="1s96gdgf54ijbsy29a4ac3y1z3d8y4iyv669mjiyx2qnnylb2gm9"; depends=[Matrix snowfall]; }; - BGmix = derive2 { name="BGmix"; version="1.30.0"; sha256="1ii0cvqpz7ai779r4hx8yimsx69ln1f7qlw7jvp3k606z52kqkp2"; depends=[KernSmooth]; }; - BHC = derive2 { name="BHC"; version="1.22.0"; sha256="0m8w4b3ihnmvccy32nwvgzwn7k9i018ydw8iz19b6kz5r5c89q17"; depends=[]; }; - BRAIN = derive2 { name="BRAIN"; version="1.16.0"; sha256="09f82dppd9zb3qf5y507yrnv1xsp4cgbwiz068ib0qjfaygmvb02"; depends=[Biostrings lattice PolynomF]; }; - BSgenome = derive2 { name="BSgenome"; version="1.38.0"; sha256="130w0m6q8kkca7gyz1aqj5jjhalwvwi6rk2yvbjrnj4gpnncyrd2"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; - BUS = derive2 { name="BUS"; version="1.26.0"; sha256="0sggag0n66n25h6g2hlk194p6fxjaapqf8bwnzw18bkpbldm3hwg"; depends=[infotheo minet]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.14.0"; sha256="0a1ksw3i7fkp84pxki5d1pnw8zryq9qapv4vxf7sgpi0q9gl1dci"; depends=[RCurl RJSONIO]; }; - Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.6.0"; sha256="0z7l5xbc23ws7jdzgx58y8nia8a588hfi785aislw7gsnki3qyry"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; - BayesPeak = derive2 { name="BayesPeak"; version="1.22.0"; sha256="1jmn8p461rmgjarf4rlhyqzrjg8xkpq56rlrk6964kqxp6jkh8bi"; depends=[IRanges]; }; - BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.22.0"; sha256="04ww55171fbv9170aknl2gbc0mqlpcvwjl9146xamxskc5hxivnh"; depends=[]; }; - BiGGR = derive2 { name="BiGGR"; version="1.6.0"; sha256="1bhjw46mwqyz67p82ag8y4jxvkhpd7d3a8flrs7h28d8srp9jvf8"; depends=[hyperdraw hypergraph LIM rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="2.4.2"; sha256="0xzdbh0didyk4wwr1ac9n1dj1473iqgn7s3i5spj2mrvqkj6jrgm"; depends=[igraph Matrix slam tsne]; }; - BiSeq = derive2 { name="BiSeq"; version="1.10.0"; sha256="0vl0arr6chqvyysmajga91m5as54jsnx2z5a23pa7lzgvgv5xzij"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; - BicARE = derive2 { name="BicARE"; version="1.28.0"; sha256="1bnwnrv6bb5va2l54y1c560s7fkmknaayf0vs4pm2s4mdamy0k2k"; depends=[Biobase GSEABase multtest]; }; - BioMVCClass = derive2 { name="BioMVCClass"; version="1.38.0"; sha256="00dzbfq1rxwpp09cg2cl7rm989jidjnvw4rmmkiq8hkqv5r1mssn"; depends=[Biobase graph MVCClass Rgraphviz]; }; - BioNet = derive2 { name="BioNet"; version="1.30.0"; sha256="0h6s83fd2y8x1l5vibj4y154ljlbjybm91l42h0yf6gyymqci5g6"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioSeqClass = derive2 { name="BioSeqClass"; version="1.28.0"; sha256="0pv63d57hck04dpha20pzyzz7przzvi536nmgnsig5zw16lis4f2"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; - Biobase = derive2 { name="Biobase"; version="2.30.0"; sha256="1qasjpq3kw8h7qw8cin3bjvv1256hqr1mm24fq3v0ymxzlb66szi"; depends=[BiocGenerics]; }; - BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.32.0"; sha256="0wn3a01l6d62prrncmy22dx4nqsgzq3lw24ybf676ghrmjaygmyc"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.6.1"; sha256="1vkhriswlk3p0xynbj2pjs9zkg9v168g3sbi0ripcbn9v93mcp89"; depends=[BiocInstaller biocViews codetools devtools graph httr knitr optparse]; }; - BiocGenerics = derive2 { name="BiocGenerics"; version="0.16.1"; sha256="0f16ryy5f012hvksrwlmm33bcl7lw97i2jvhbnwfwl03j4w7nhc1"; depends=[]; }; - BiocInstaller = derive2 { name="BiocInstaller"; version="1.20.1"; sha256="0lsqkx8q98rix4g7wfx78fnkzmz2mjb7m9wc9zgm69m0iyp50aad"; depends=[]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.4.3"; sha256="1f5mndx66vampcsq0n66afg6x851crl0h3nyv2nyp9bsgzj9cdzq"; depends=[futile_logger snow]; }; - BiocStyle = derive2 { name="BiocStyle"; version="1.8.0"; sha256="03lmw649fch64kcwyps6ry9qmjz7f0ydwhc4yzkl7d6lffgfvihc"; depends=[]; }; - Biostrings = derive2 { name="Biostrings"; version="2.38.4"; sha256="0cjd7i4bdwabzb02gm753aji5xaihkj5ak8nb0d32cclxbj0hp33"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.14.0"; sha256="1q58za8jd96bk2wxy7np0b7lar3v0pk6ll833k10x1b260rvpgbp"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; - BrainStars = derive2 { name="BrainStars"; version="1.14.0"; sha256="0r6jd6h48c15sg655079lwr9v1gl79wk8773w2q9fyfmakhj15vx"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="1.4.0"; sha256="0qb1xiyq993hfzdgjaw982hhvnd9lwwdzq6anr2r9dbpzsini136"; depends=[RCurl rJava]; }; - BrowserViz = derive2 { name="BrowserViz"; version="1.2.3"; sha256="009bpkns2kbg77lpxzy3jship1yvrff72kacb8zcdyg7npn64jcz"; depends=[BiocGenerics httpuv jsonlite Rcpp]; }; - BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.2.3"; sha256="1pj9b0nhkrc3bcs36dpm2hy9lsfp2xwnrlf99b9v6n96ijki8bg9"; depends=[BiocGenerics BrowserViz httpuv jsonlite]; }; - BubbleTree = derive2 { name="BubbleTree"; version="2.0.1"; sha256="1qkvmddd7l1xg5459gd9w86d4k4rjm40c93k6piwzv8hrzr4mjzc"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer rgl scales WriteXLS]; }; - BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.34.0"; sha256="0f345lsj5khgys2apjid513psx79fdpzg6vm5ndn9iw1rkgafv9f"; depends=[]; }; - BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.34.0"; sha256="1i8b0s0g4yk8s99iw6bli494rbg169306b8idwl4sncjyl6mzj0c"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.6.0"; sha256="0mmfjb93apnn39g3jrfan4zmxz7axlc6mnv6464n44kysdxyh5a4"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEr = derive2 { name="CAGEr"; version="1.12.0"; sha256="05hv46dqvqrw4kn9975wdbvvrk8hm07qjvx8dsdb4smaq67139kx"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; }; - CALIB = derive2 { name="CALIB"; version="1.36.0"; sha256="1b21f0zg4czhk4pbd3c3vbl0p4qpw0l4wg17lm1gw4b6d6ml7jsb"; depends=[limma]; }; - CAMERA = derive2 { name="CAMERA"; version="1.26.0"; sha256="0cjm98bzg5snpgd8kjj8nmk1j851rbdlidk2dbrjv373i31nf2gj"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CAnD = derive2 { name="CAnD"; version="1.2.1"; sha256="0ncpa81ac6dzkhqnr56i4nzzipsmzy44n71z6sdhpa39rgdar2a7"; depends=[ggplot2 reshape]; }; - CFAssay = derive2 { name="CFAssay"; version="1.4.0"; sha256="09bc40dck4xihksji1nmzls7qmlrgwqn2jav95x0i0461l20x2v9"; depends=[]; }; - CGEN = derive2 { name="CGEN"; version="3.6.2"; sha256="13p2f92sh6l7bqrigqaqpcbyk3czby82r2wdr3gmz6xfwsjxkfmc"; depends=[mvtnorm survival]; }; - CGHbase = derive2 { name="CGHbase"; version="1.30.0"; sha256="02q2yv7mbdjq1xby5bxydd0w6vzw9nim7ac6fb0rjpcnsxng0j82"; depends=[Biobase marray]; }; - CGHcall = derive2 { name="CGHcall"; version="2.32.0"; sha256="13f3dyska147cl2q5kn42fz3d9dm8j06cmszc4ssc0i2256cp6q0"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; - CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.24.0"; sha256="08paz9ij387b8x6bg1931q553j69ajk6i3lmj2jriqjdjii8wkv1"; depends=[Biobase CGHbase CGHcall]; }; - CGHregions = derive2 { name="CGHregions"; version="1.28.0"; sha256="1lnd6vwfdb1f6da4701f38vq8x4pqdp5f3p0m2j8g32qfj64vsz5"; depends=[Biobase CGHbase]; }; - CMA = derive2 { name="CMA"; version="1.28.0"; sha256="1jpjfcjhxjw3ghwr7bgkwyx7lx07v0kn1pxkhb6hs2jc7fyc8jp8"; depends=[Biobase]; }; - CNAnorm = derive2 { name="CNAnorm"; version="1.16.0"; sha256="06i4i4qbd0k0rs8l244igr6qrnfjsk5wqsxdc9vydxmnid15i7fk"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.6.2"; sha256="1ch2pwjimgrld501lfx213mbaz8a467m7mmd78ci9p2lhwyhl8xm"; depends=[Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges IRanges RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.12.0"; sha256="1ral42sa8ha43g3bsk3f9v9lz9962rhyjpzxa5ciq9zc1s0ymwfq"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.10.0"; sha256="1wgndfl1r21nrwr3gdrgz7qnnwcw5x6w55c3m5fjw6ypy8npsn1b"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.12.0"; sha256="0636czqfy3jyhzi8xpplzxyxi9in9qysshld6pfqbx89l0nhagvm"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.12.0"; sha256="0q65285v4szwaq87skga9xcxixg1hbm3jw4ydv1k2g84b40611qs"; depends=[CellNOptR genalg]; }; - CNPBayes = derive2 { name="CNPBayes"; version="1.0.0"; sha256="06jw9xi0q5slh1xghgj1js5bn1gsmpag0w84cxa7qf5ls1bw4xp6"; depends=[BiocGenerics combinat foreach GenomeInfoDb GenomicRanges gtools IRanges matrixStats oligoClasses RColorBrewer Rcpp S4Vectors]; }; - CNTools = derive2 { name="CNTools"; version="1.26.0"; sha256="1dc57fyi0mr8y0kx17m2cnhwzn9cyc7f4fpmn1yr34ngvaj3dw66"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.0.0"; sha256="0m37asnrdm7zl70j2d477lpxydnliv1d9bgb0vn0hkfrwsky5fhy"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq plyr Rsamtools xlsx]; }; - CNVrd2 = derive2 { name="CNVrd2"; version="1.8.1"; sha256="0xbibar60gm0jj5si1br26vkbw6kqf82796i3p5512wqvwfsbk8j"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; - CNVtools = derive2 { name="CNVtools"; version="1.64.0"; sha256="1sm28sl7ghcfrgjd0d741zfy21r6vxkhj8cn510z95aa49icpd8j"; depends=[survival]; }; - CODEX = derive2 { name="CODEX"; version="1.2.0"; sha256="006dmjcd84gnagm2gfqdxwfnrq30sc3zfvqz67wl3vpg951hpjws"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb Rsamtools]; }; - COHCAP = derive2 { name="COHCAP"; version="1.8.0"; sha256="1lak57k8b8jcd21wajr1ivi1sml73fsvb6jbdz6nxgjbq7al1hgk"; depends=[COHCAPanno WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.8.1"; sha256="1gqly197m0r9c8zbj7673ns94q3x7cwjdajv5aj714j63vmnv6fz"; depends=[abind clue data_table knitr plyr RColorBrewer Rcpp scales]; }; - CORREP = derive2 { name="CORREP"; version="1.36.0"; sha256="0hjkwl2mf173mfdrziiadf5hacz6j67skizch44rxc2kfj7sbhyb"; depends=[e1071]; }; - COSNet = derive2 { name="COSNet"; version="1.4.1"; sha256="0myckn066xjdm8kikqjcv1sarr8hdls1js4ak2hc97cl8is20a1r"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.10.1"; sha256="1pyif3a67z9fw3q2960sbbrb5si0xrdf04hahzm6vsqzryyvizkl"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table IRanges S4Vectors seqinr]; }; - CRImage = derive2 { name="CRImage"; version="1.18.0"; sha256="04nk7xx870hzvdnx5763v2rr82314zv6ydwhv8gmxpp2lg23hsdy"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; - CSAR = derive2 { name="CSAR"; version="1.22.0"; sha256="0d6adk3mq7grf8dsx822d2qf5jrdhvm551z26injic8i7v4i0s3h"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - CSSP = derive2 { name="CSSP"; version="1.8.0"; sha256="05x0agbcpns8s3vmbs7ygdny249vcahzk7sqv50nz39ap2c7i309"; depends=[]; }; - CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.13.0"; sha256="0c3yjscd1jlgfl869vnv37qdb0y5gicnja1why9ws95qqgmij6zl"; depends=[AnnotationDbi limma qvalue]; }; - Cardinal = derive2 { name="Cardinal"; version="1.2.1"; sha256="1r3plzx39d85ipihsflliiczig3329frmxzyd2bwnmd3l91jf5dh"; depends=[Biobase BiocGenerics irlba lattice ProtGenerics signal sp]; }; - Category = derive2 { name="Category"; version="2.36.0"; sha256="0z6sj43y3wqfvkjvlk7hh08h5447bm3szcmd44y8s9lbkq954rxx"; depends=[annotate AnnotationDbi Biobase BiocGenerics genefilter GO_db graph GSEABase Matrix RBGL]; }; - CausalR = derive2 { name="CausalR"; version="1.0.1"; sha256="0z1vv5j4q9ap54w2xf923gdjdix7xd16k6lqvk5s5vapcnyy7v3r"; depends=[igraph]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.16.0"; sha256="1fig3brrc0hv48kx7lqbbykc9m2dzwy93cy70hlwqcs7b6phxq11"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; - CexoR = derive2 { name="CexoR"; version="1.8.0"; sha256="0h0q2a9k084dycxnj5lvdqs31hqqi7iza732m7kdgsazjfk5fzxg"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChAMP = derive2 { name="ChAMP"; version="1.8.0"; sha256="079ks6ds7k2mphfw73zqldi4s6zn961qkynhnqiw6fmph9gg785z"; depends=[ChAMPdata DNAcopy GenomicRanges Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest impute IRanges limma marray minfi plyr preprocessCore RPMM sva wateRmelon]; }; - ChIPComp = derive2 { name="ChIPComp"; version="1.0.0"; sha256="1ayg98kvh9yqj132r2fw9cdq38na64rw6rmrpqkgfj1csv4q7wiy"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.6.1"; sha256="1mw17flai6gk3sp08776sdl3mlmdq5xla7ghjq2rqk89qn5grpci"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors]; }; - ChIPXpress = derive2 { name="ChIPXpress"; version="1.12.0"; sha256="0k7z1ndjl869nqc0ajl437994qrfrfj5hi92h0z5qyv3vailfgsy"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.4.6"; sha256="0pgy2x80y7rxbarbczrz8ijacc1pv05c8y42a47zc4yaxg14pzfj"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI ensembldb GenomeInfoDb GenomicFeatures GenomicRanges GO_db graph IRanges limma matrixStats multtest RBGL regioneR S4Vectors VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.6.7"; sha256="0ffs87i1kc8ckx29rdx173fzyaiqmpw1h5rgy39dk5r6mla4xj0k"; depends=[AnnotationDbi BiocGenerics boot dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix plyr RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.24.1"; sha256="17v7wlkf4hblp499v90fxai710fn4syx1n3dbfa1kbiyr218gdbz"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.24.0"; sha256="0nazrzjpc1y88d1yj1qpmkcjnds4w6921ag7m6gypp8hwzzypqnn"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.8.2"; sha256="02bsf78skr7mi725h0qmjixlfjq456y23cyjjmkrk6wivkjd806d"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="2.22.3"; sha256="0s1hwvfpf90j74gwj1hbd4mm84qf5l0hz5wd3l1fd2jnavv4z8x8"; depends=[BH BiocGenerics DBI digest ggplot2 Rcpp RCurl rjson]; }; - ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.24.0"; sha256="1pjw05ig4wyh455z0xwplfl12z8mbi25k5ylwmymgm41pqy5n2a6"; depends=[annotate AnnotationDbi Biobase BiocGenerics IRanges rtracklayer]; }; - ClassifyR = derive2 { name="ClassifyR"; version="1.4.15"; sha256="0zxvk875y05z52mp8v09wvrxfxs8qacpcll4cg9px5pyx361fbkj"; depends=[Biobase BiocParallel locfit ROCR]; }; - Clomial = derive2 { name="Clomial"; version="1.6.0"; sha256="0x6j3qjnwh31c11gq2fqyhapc5wrd9szk9bphcgsbf7n317gbf61"; depends=[matrixStats permute]; }; - Clonality = derive2 { name="Clonality"; version="1.18.0"; sha256="0rx3k8c55q831dhfh5dpkl3px8jj6glx6i3la80r9krx68mbp947"; depends=[DNAcopy]; }; - CoCiteStats = derive2 { name="CoCiteStats"; version="1.42.0"; sha256="08xg3583qx0v5agsq1im5f1sna32i58mhpgvvsa0ccfnbbh9klpw"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="2.4.0"; sha256="1dl3dmhfp2sjmqnvpgpqggnzrfg1w6yf5r34al2y4yngkg8s6cds"; depends=[BH gplots RColorBrewer Rcpp]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.6.0"; sha256="0ynizawrygpka2isldbfmnlz1zqczx2fv1kbvz1lbm9qwbpj7rn4"; depends=[arules igraph shiny]; }; - CompGO = derive2 { name="CompGO"; version="1.6.0"; sha256="0n84z3mhg6zb3yafz0803g6cggzpbw31fn933q9bg7pybij0nf1p"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.6.0"; sha256="113l7ykgxqnrbr4rz3cpa39k3n6i67zkxindcacpv35pncmasi6c"; depends=[circlize colorspace dendextend GetoptLong GlobalOptions RColorBrewer]; }; - ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.24.0"; sha256="13fy6qzqnph6xlbkshz2x8n20s5fhx6agawqb1wpvpvh4gcpa6g3"; depends=[ALL Biobase cluster]; }; - CopyNumber450k = derive2 { name="CopyNumber450k"; version="1.6.0"; sha256="0z4v6x140gzaxf06a73d2qd6dp8gvq62l8xb7bii21r7n089m14i"; depends=[Biobase BiocGenerics DNAcopy minfi preprocessCore]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.2.0"; sha256="0hmww433hyg4wgi2hx49mwrd4y65myyi00akys3mhdsxn3s0al13"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; - CorMut = derive2 { name="CorMut"; version="1.12.0"; sha256="0ldqw4g15i4r1nv74msn97c75wcr1nvwk1ffnkafvnc8bwcfzfmy"; depends=[igraph seqinr]; }; - Cormotif = derive2 { name="Cormotif"; version="1.16.0"; sha256="0kx4h5c3vqr0x7swgq7fbkfqpknkapvqwvfmk42yh26vlabaf9cr"; depends=[affy limma]; }; - CoverageView = derive2 { name="CoverageView"; version="1.6.0"; sha256="0z3z2s5p1xrc04gzmmry3n9qqk4cam2p7pw7mak8kiswdraba7iz"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - DAPAR = derive2 { name="DAPAR"; version="1.0.0"; sha256="1fcsgrhs64dbr11bzi9zr4ddam5z0an26pfdd06v6i80yxx95zsq"; depends=[Cairo ggplot2 gplots impute imputeLCMD knitr lattice limma MSnbase norm pcaMethods png preprocessCore RColorBrewer reshape2 tmvtnorm XLConnect]; }; - DART = derive2 { name="DART"; version="1.18.0"; sha256="0xghg36gfd6hyd8zd3l9c2ffk2s0c8jpgg8skvg7d70hzhm47ldb"; depends=[igraph]; }; - DASiR = derive2 { name="DASiR"; version="1.10.0"; sha256="1by2655qvskzynvbh47vydm6nl2cmnfqqs25453k29n672a6yyw4"; depends=[Biostrings GenomicRanges IRanges XML]; }; - DAVIDQuery = derive2 { name="DAVIDQuery"; version="1.29.0"; sha256="0gvm6qjx8y61nbnbz66md74pfc4awj4900pjr8q1m5sip5yzbxj2"; depends=[RCurl]; }; - DBChIP = derive2 { name="DBChIP"; version="1.14.0"; sha256="1x876cv2j0bdb7jflm663bp7xk32rsxpf9jwwskbl8r4r1ffsapa"; depends=[DESeq edgeR]; }; - DChIPRep = derive2 { name="DChIPRep"; version="1.0.4"; sha256="0cwggkpbza25r2yssyhs9zkwzncmxkd406k2sn2y0rq1kdi08hj2"; depends=[assertthat DESeq2 fdrtool GenomicRanges ggplot2 plyr reshape2 S4Vectors smoothmest tidyr]; }; - DECIPHER = derive2 { name="DECIPHER"; version="1.16.1"; sha256="0bh3c0v3fpvb9k7n3d405615hgp08fq463xlc67wz9h3l47wjrh7"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEDS = derive2 { name="DEDS"; version="1.44.0"; sha256="079c3in183ybp0c46hqh99grqmbshsnrcax3qz08z5xbc394azna"; depends=[]; }; - DEGraph = derive2 { name="DEGraph"; version="1.22.0"; sha256="0bjyvw218f8z0qn655idvrhg79jshya9qprmlwy28h81cn548pm8"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.6.1"; sha256="09srzwgjqwbadxj7a7rs1dylyqm8k7f4hjrhsb3k06nsbjfbfyd0"; depends=[edgeR ggplot2 Nozzle_R1 plyr quantreg]; }; - DEGseq = derive2 { name="DEGseq"; version="1.24.0"; sha256="0yzi6bil4qj85qxa843j3s6m6qb33gy73s6fyap94cjqj72v6809"; depends=[qvalue samr]; }; - DESeq = derive2 { name="DESeq"; version="1.22.1"; sha256="14rc1zcn4a7hkm43ca9js5ffhcm3awjrpl5bx66fj3szibjnnzcb"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.10.1"; sha256="0f3jz578z83bzlqv27vhbcrz4lab6qycf6dy4cdfgvybx1k35dn9"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.16.10"; sha256="0rz2zvwwc13zjxlfqv38kx1kid6qqsii5gflhaaa4xgp8qk3y9f1"; depends=[Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools statmod stringr]; }; - DFP = derive2 { name="DFP"; version="1.28.0"; sha256="186f8lkw7c37mxixp8qa0xg21c47yf6da1l80k7ngdan86q80cs2"; depends=[Biobase]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.2.0"; sha256="1rkzbfaa7bx3bpfdppx3xzrpxinmgj1frzxird966xk2b40m4bd4"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="1.6.52"; sha256="0nvwh7jd62yh5v12s1b71797zawkaj3x4ibmgmzisg8zkxpl8fwq"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi plyr]; }; - DMRforPairs = derive2 { name="DMRforPairs"; version="1.6.0"; sha256="0b5mkhb5gkvfccvpgvklb3ksnq9gv6napcvxzcrph46nmm11i8zc"; depends=[GenomicRanges Gviz R2HTML]; }; - DNABarcodes = derive2 { name="DNABarcodes"; version="1.0.0"; sha256="1wc2rcd7bc2yawm20frnx6xrkflglkcc9l27l91l349pdgsidcpm"; depends=[BH Matrix Rcpp]; }; - DNAcopy = derive2 { name="DNAcopy"; version="1.44.0"; sha256="1c1px4rbr36xx929hp59k7ca9k5ab66qmn8k63fk13278ncm6h66"; depends=[]; }; - DOQTL = derive2 { name="DOQTL"; version="1.6.0"; sha256="0sl7a1hhszrfxn52iw7cz6sl38y7mwk4giw3a7kqj22f1p6bhc6y"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; - DOSE = derive2 { name="DOSE"; version="2.8.2"; sha256="1mbp55swmnb8ag5c8cz30wxrr0xiwhrbl6z6r6ls20cvldzc2dfa"; depends=[AnnotationDbi DO_db ggplot2 GOSemSim igraph plyr qvalue reshape2 scales]; }; - DSS = derive2 { name="DSS"; version="2.10.0"; sha256="06a7cs9i12p9zfv52hl4v3fll4dhaapjhq6fqc58mqlzfa8qlwdm"; depends=[Biobase bsseq]; }; - DTA = derive2 { name="DTA"; version="2.16.0"; sha256="1j3dab7w9nqnbxyckwxhm733dvpdqyg22h60ipijyjwq2d1l8znc"; depends=[LSD scatterplot3d]; }; - DeMAND = derive2 { name="DeMAND"; version="1.0.0"; sha256="1dcq5hvpdaihagg1rasbrhamaf938zh5b1lh7ynd0q52qpr5fm56"; depends=[KernSmooth]; }; - DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.12.0"; sha256="1dnq44l20b2n9skyz9kl4dck5vlir2jiyy265jgvgw4xji1gwi7l"; depends=[ggplot2 limSolve pcaMethods]; }; - DiffBind = derive2 { name="DiffBind"; version="1.16.3"; sha256="1mgnjfd3k5d44lzlzs4wms7mljbfrpqcs50g7jj4wk8y7jb21qyx"; depends=[amap edgeR GenomicAlignments GenomicRanges gplots IRanges lattice limma locfit RColorBrewer Rsamtools SummarizedExperiment systemPipeR zlibbioc]; }; - DiffLogo = derive2 { name="DiffLogo"; version="1.0.0"; sha256="10p93wwndvr2y4mfnh7y23gyr9i7lskgp1sa43261s4zjhynsp1k"; depends=[cba]; }; - DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.12.1"; sha256="1izxlcj4niyj2f4wqfjpajrki7lggr1xd8kvjmhmbqz1p932rryf"; depends=[IRanges S4Vectors]; }; - DriverNet = derive2 { name="DriverNet"; version="1.10.0"; sha256="15iimcjdj28nbiksc9v6gw2i9mpkvbwkk8zcia1b7yklwb33assp"; depends=[]; }; - DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.10.2"; sha256="168dajb9ism63k4kgj37b6znkia3ch6p3rzbzzjy3qbyyazzd9b2"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - DupChecker = derive2 { name="DupChecker"; version="1.8.0"; sha256="0p75kq178mls765q2v22bj7a727hb1v5rj4wkcagxavcls92vg0p"; depends=[R_utils RCurl]; }; - DynDoc = derive2 { name="DynDoc"; version="1.48.0"; sha256="098idkx8m01gy0rylh67v5qnbx8bplyymc9il5sfpdv1hpc9abm3"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.12.2"; sha256="1p49dap5nn9nwpglssl7fmlgvi1a1k0cpzdxph6x82kcm346srn4"; depends=[abind BiocGenerics fftwtools jpeg locfit png tiff]; }; - EBSeq = derive2 { name="EBSeq"; version="1.10.0"; sha256="19slkx8b9p54vg4d3895kjsz4gij9pag1i3f351ypn0yx19skb80"; depends=[blockmodeling gplots testthat]; }; - EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.4.0"; sha256="02ba8famhbp4nxkg8jkwzs63qkfi7hi03h6w1igl2xn2343fnla3"; depends=[EBSeq]; }; - EBarrays = derive2 { name="EBarrays"; version="2.34.0"; sha256="06kh68i7fjbi99rl8jp9vhbpywsr0x0fmyny83gzkbr192c8dvdw"; depends=[Biobase cluster lattice]; }; - EBcoexpress = derive2 { name="EBcoexpress"; version="1.14.1"; sha256="1xdgzw4pik02mzs6h4fv3x3z4kgmz2am7562b7q83ppv4hr2qjgq"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.4.1"; sha256="1jjk36sjbxs4sa2j87bayi5prgk3zmkc9vnm0grj9lgjdm6ficbb"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.8.0"; sha256="0gqgq57a11k7iygjyf3bszx8gm90a8frabmzib7kk84k3wrvynqg"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; - ELBOW = derive2 { name="ELBOW"; version="1.6.0"; sha256="1kpprsv1s08qks10raqdh82c9w8dg0saxa1ahhnk1a2whzxj0n3m"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="1.2.1"; sha256="0ppr30l43fiak0x798w3i2w1as1gycxnd34iplm1i39lzsdni7z4"; depends=[BiocGenerics ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra Homo_sapiens IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi reshape S4Vectors]; }; - EMDomics = derive2 { name="EMDomics"; version="2.0.0"; sha256="13rcbkyyk1l6xqklmws1ilnzyhal7g99499rnh0wlxbrwsb9n51w"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; - ENCODExplorer = derive2 { name="ENCODExplorer"; version="1.2.1"; sha256="18m42w9amjxz3d50zx5p7nvjc4kjbqhlmrqcnxy4jfyzm7sm7qby"; depends=[jsonlite RSQLite]; }; - ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.18.0"; sha256="1fyp6qyvw5cbapnpjx1s86pss2xhv98s4lqxfxwrsng6p1jh5z89"; depends=[rJava XML]; }; - ENmix = derive2 { name="ENmix"; version="1.4.1"; sha256="191mm9pn53sys62736qf8kn84jxr9x5r39j4qbwyqq32gsjvq6ji"; depends=[Biobase doParallel foreach geneplotter impute MASS minfi preprocessCore sva wateRmelon]; }; - EasyqpcR = derive2 { name="EasyqpcR"; version="1.12.0"; sha256="0s0ir8bpj3fwg79mzqz57c0crkqqq7hywiwyihcz2cykhsm1r11g"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.0.0"; sha256="02mdn7isc58fznm55qxfp1an19wfl3kj509467c9r10b5zl5mglk"; depends=[ComplexHeatmap GenomicRanges IRanges locfit matrixStats]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.0.14"; sha256="1sia76zmcpb8r3fq136ilcpnwpsa3myl385b3k2kc3hpqchi0rj1"; depends=[AnnotationDbi Biobase biocGraph biomaRt ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS mixtools neaGUI npGSEA PathNet pathview ReportingTools Rgraphviz S4Vectors safe SparseM SPIA stringr SummarizedExperiment topGO]; }; - ExiMiR = derive2 { name="ExiMiR"; version="2.12.0"; sha256="0c37jkych7pgahfdbwqqffg6746cfxwv7q10pqpnjsdg075pw8q9"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExpressionView = derive2 { name="ExpressionView"; version="1.22.0"; sha256="1gwhz8q5kyi01jwlwpd39dp292pc6k4v1w0al4653151qb5m55ja"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FEM = derive2 { name="FEM"; version="2.6.0"; sha256="1pwbn2igwrd50wn8402f3zwd22h4c8anjmbrls2i6h86ardl046f"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; - FGNet = derive2 { name="FGNet"; version="3.4.0"; sha256="0pvzy185wqd9rnzc2py92zmpxywi8ysk9a7dh3415m748knw4rz8"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; - FISHalyseR = derive2 { name="FISHalyseR"; version="1.4.0"; sha256="0vn83slaaphw9nxp7yp6v8xp5n6kqd2zzvv7v4bn9jfi4cskxbib"; depends=[abind EBImage]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.6.0"; sha256="05q3cbm9v9wq0av607gx526989a88lsbdaaskgac4dcfwwb6s5xy"; depends=[fda MASS]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.0.7"; sha256="0ga0iwscbcczysldizgp8g19gsyszfw4vgbgs45q9px95603z0cg"; depends=[Biobase BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.2.0"; sha256="1y1y7g9111z55cwi2ph44yqib41234g77xwsybk6irlq1anizz7p"; depends=[RCurl XML]; }; - FlowSOM = derive2 { name="FlowSOM"; version="1.2.0"; sha256="019qzh7h0bygxi4b4si1zxavx99121has7jry7swkglwss2qx0ri"; depends=[BiocGenerics ConsensusClusterPlus flowCore igraph tsne]; }; - FourCSeq = derive2 { name="FourCSeq"; version="1.4.0"; sha256="1xh0l90hp6jy9j0xkh78dm9kyk90zzlg04yfrzd4v12mwljs8r19"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.12.0"; sha256="1125ismkp2sprshv4b39l6bycdlry3933jaliva17c0bgjr27jhm"; depends=[AnnotationDbi ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges org_Hs_eg_db plyr reshape Rsamtools rtracklayer scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - GENE_E = derive2 { name="GENE.E"; version="1.10.0"; sha256="1czm1j144i842d7lf01c9gmyifikp4a66sq49i7rgpzbiz3pndkf"; depends=[RCurl rhdf5]; }; - GENESIS = derive2 { name="GENESIS"; version="2.0.1"; sha256="1v8d114z6sbqqvf4sbw3wzifzqrig2yjmppmq0jnjyrjag3ph1ab"; depends=[gdsfmt GWASTools]; }; - GEOmetadb = derive2 { name="GEOmetadb"; version="1.30.0"; sha256="1jw4n5p7vd75qhz7r7ll6ydsdrgmrclb8p0sks4xz3l87cd03pb3"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.36.0"; sha256="18scw6jx4z7zab653if686cn1kyy0v2i7dfvvxb05wsrj7blmai1"; depends=[Biobase RCurl XML]; }; - GEOsearch = derive2 { name="GEOsearch"; version="1.0.1"; sha256="1zag3rg2cfs0zfh092rzwhshnkncrv2p88flz9hy2n350k1xnyc4"; depends=[org_Hs_eg_db org_Mm_eg_db]; }; - GEOsubmission = derive2 { name="GEOsubmission"; version="1.22.0"; sha256="0djm7r2g2c0k5img45v9a56gfppx0qwfla8di01fvphlwag21gi1"; depends=[affy Biobase]; }; - GEWIST = derive2 { name="GEWIST"; version="1.14.0"; sha256="0k6zk4g0rsfjvf30sx588xfrvi31vwnh5fysz9rigbkvrhayv12r"; depends=[car]; }; - GGBase = derive2 { name="GGBase"; version="3.32.0"; sha256="15vvwigv9xy87dl2c795c3abpnrzr364m4sbslmns403rg8dpsiw"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGtools = derive2 { name="GGtools"; version="5.6.0"; sha256="1ndvlyfzjn519z9zh6kf5sdjaz3ckracgyf2lxp23nchm2311lf0"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - GLAD = derive2 { name="GLAD"; version="2.34.0"; sha256="18ahik48499j6yf6h7k8f05s7w50b5fzs2hcz33zz36mlppz4xnr"; depends=[]; }; - GOFunction = derive2 { name="GOFunction"; version="1.18.0"; sha256="00pdxf24sxdnh31h69c5zjhl1j2jv1ag91ay3a9w62p07bcg82l6"; depends=[AnnotationDbi Biobase GO_db graph Rgraphviz SparseM]; }; - GOSemSim = derive2 { name="GOSemSim"; version="1.28.2"; sha256="04qyxy9adqk37hwgnx4kqa8p8fsrl1d1cf0cc9y2mq6wxq0ilw27"; depends=[AnnotationDbi GO_db Rcpp]; }; - GOSim = derive2 { name="GOSim"; version="1.8.0"; sha256="14dyazr7p9p7h1cckbmd5yjj76718lqgfnqbcrrz52qyk0dqz6wx"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.6.0"; sha256="0fbrflqyfihks23mxmqn8v4mm5m1ff4zzg52lfxdz3an72mvznv6"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges rtracklayer S4Vectors ShortRead]; }; - GOexpress = derive2 { name="GOexpress"; version="1.4.1"; sha256="16ckxdlzsx8p2qli55008j59xf88yf7b62z3nilxh5fvnr92900w"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer stringr VennDiagram]; }; - GOstats = derive2 { name="GOstats"; version="2.36.0"; sha256="0jxzlipz27pm2iijgiczpnjlda9fj8y00sbbksyyr3i1rjx72vp5"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL]; }; - GOsummaries = derive2 { name="GOsummaries"; version="2.4.5"; sha256="0qbvgg1g17dxrn80smrd0ab0mk63xbzv8zrrdrlwd4fdvr0ysc96"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; - GRENITS = derive2 { name="GRENITS"; version="1.22.0"; sha256="1i1mbc7sd0irc0da0pz876dibvyx451h9475hlq9ydw6q04kfjzq"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GSAR = derive2 { name="GSAR"; version="1.4.0"; sha256="0l0vid5ba3yj8ywdj904zvm6gyvig1drxvr1b4xidyd0g0fpl6a9"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="1.8.0"; sha256="06pjmi5xc8hld09pmw87lwk5wa7cyd9qb2h32qmblc56wai7qxny"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.32.0"; sha256="1jjl5x7qrw83v0g0d6c27g5jk5zwjd31h0p4ghprr7y34cbddaas"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEAlm = derive2 { name="GSEAlm"; version="1.30.0"; sha256="1gxa973l3m3jdxmvx0y0fnhpxd81bg03j6p9b0dcbhw93pdnjhsv"; depends=[Biobase]; }; - GSRI = derive2 { name="GSRI"; version="2.18.0"; sha256="1jjzkgaf2scnqasjd1nbxrfm5k97psyxy0d2grb23aznfviynmsy"; depends=[Biobase fdrtool genefilter GSEABase les]; }; - GSReg = derive2 { name="GSReg"; version="1.4.0"; sha256="1qq0lrx2mvwzf7s4v8i162fpb68njm5sscz4h22hyskdxrjkk8vp"; depends=[]; }; - GSVA = derive2 { name="GSVA"; version="1.18.0"; sha256="1w17a5d4vd4gibg88npbx86pmcg7wzqnih1a3g4mpvld0wf2xs8q"; depends=[Biobase BiocGenerics GSEABase]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.0.4"; sha256="03hswcshnvb7pmacxnx6lrqqy6fxprjkv9sydjkca5nvd84i7bdz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomicRanges IRanges matrixStats S4Vectors]; }; - GWASTools = derive2 { name="GWASTools"; version="1.16.1"; sha256="09zkwh5zcrfss2kdj81jdcs6i9i123xis3myj73f4si74bd1dq83"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.12.0"; sha256="1gacvc1vd0sl6jn0r14w4n37hsrmx6m5k1l7d2a5m3qssyk6l6n3"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.0.0"; sha256="0bzb1wzj9jj069x6ikns4743h5kc4nmdf5j7mm2w2lrfa1x1v1dd"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; - GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.16.0"; sha256="1vb7qj2pgg8s51c43y12r1ar68jdaf3xrmmwvq8r182ky3cs45j7"; depends=[Biobase PGSEA]; }; - GeneGA = derive2 { name="GeneGA"; version="1.20.0"; sha256="1pnpcqrfvzff2fyakapkk48l76vx960617l2nbm0pbsv98sdygb2"; depends=[hash seqinr]; }; - GeneMeta = derive2 { name="GeneMeta"; version="1.42.0"; sha256="0r6ch9xylv3zfcfm95fy6civcg322dw43vadlw9asv9pkd80fai9"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.12.0"; sha256="00gqrsnfizf2gspqazjg6iyhvazgs67jsakx588643ss5fbdmxkv"; depends=[graph plyr Rcpp]; }; - GeneOverlap = derive2 { name="GeneOverlap"; version="1.6.0"; sha256="0hc7khxgpic2h5s60gnjrr89i4lq4v3jb8d1333bvi5yqvj45qip"; depends=[gplots RColorBrewer]; }; - GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.26.0"; sha256="08wi95jgbf3ldylfhx78kc390bfj3wvl2ymvs9yqpjk57q8hjq8w"; depends=[affxparser Biobase Biostrings RColorBrewer]; }; - GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.14.0"; sha256="05wcx826932i78k1fnl1ifjwzdz95i4bq0picm44wb4s13pv31my"; depends=[Biobase limma MASS survival]; }; - GeneSelector = derive2 { name="GeneSelector"; version="2.20.0"; sha256="179mjqk9w4zm33mhja7hmwphpnxsv32mh60avs2mqmq9fi9z6pdh"; depends=[Biobase limma multtest samr siggenes]; }; - GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.38.0"; sha256="1yh8s40fr0yqbch7ix9y4p22ih0008xpjy5nn5x37y575l41hhwh"; depends=[gmodels gtools mvtnorm]; }; - GeneticsPed = derive2 { name="GeneticsPed"; version="1.32.0"; sha256="0ysrjrs30kqcfafjc5wzz2f4w59jhfk5ywyzn8rgagajvdzcg6z4"; depends=[gdata genetics MASS]; }; - GenoView = derive2 { name="GenoView"; version="1.3.0"; sha256="09k9xjmx3qmsfr3a4vrfgs73r0xsymf5m4gl0zjjk4cnfk7bs41v"; depends=[biovizBase GenomicRanges ggbio ggplot2 gridExtra]; }; - GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.30.0"; sha256="1wkjcg6w95wlrdgaskc3xndl0azmxhxnsipf9qrj057gf2rpx7zf"; depends=[biomaRt]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.6.3"; sha256="1ggp005n2rlkad00ilzn95y4rd484yr1chdhnd6fwg45rbi94d63"; depends=[BiocGenerics IRanges S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.6.3"; sha256="02b9j1pfd39bkvb623k5k0ziq9rpw093hifqw65vb954dwj29jhd"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.22.13"; sha256="0n3rkj66la6wizgcsf2rmwcsyfxz9kv5zak337lmk1raqfnancz4"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.6.2"; sha256="14f3zw2vxmb3b6gxxvdvfj34hxp3b3n4k6qx80ycw8kpdr5r73n4"; depends=[BiocGenerics BiocParallel GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.4.2"; sha256="1a8b57dxla9hqzdn22jxb3ivl3i2xz41abrb7mgkxphgv55jf190"; depends=[BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph IRanges Rsamtools S4Vectors stringr]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.22.4"; sha256="02df5683nrpn9d10ws8jz9b55nr9055hh882xp2i154xdddir0k0"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.4.5"; sha256="0aiyk5hd6i6j5f2lp72nyqh8arp41aadzamdgkghwmnxhipm3czs"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - Genominator = derive2 { name="Genominator"; version="1.24.0"; sha256="1rqzxbji5wh6dshjsprj1mzps08l07gxmjir9naj6lsj2q0xhn9p"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="3.38.0"; sha256="011yf2bng9qb7rgds670ranp9z5qm569405qpk5y6xb9rvnpnxy3"; depends=[annotate AnnotationDbi corpcor globaltest]; }; - GoogleGenomics = derive2 { name="GoogleGenomics"; version="1.2.0"; sha256="1z87jmd5vzg5v93bv9k3998wqhnk5p2v9d2qr9g0xxjvxw2q78fm"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; - GraphAT = derive2 { name="GraphAT"; version="1.42.0"; sha256="036g6cc9r96jgj7nhlgmq0jn553hajyalwibkdnw7qy88d45c8qz"; depends=[graph MCMCpack]; }; - GraphAlignment = derive2 { name="GraphAlignment"; version="1.34.0"; sha256="0af3m51zs35v84h4vj02fwm50iw2rk32jrixdbcw033ispl7wrkv"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.12.1"; sha256="1fa64jam3cl1khv8jspwjb9myifmgx0kwg0b601bia578bjcdj7d"; depends=[igraph iPAC RMallow TSP]; }; - GreyListChIP = derive2 { name="GreyListChIP"; version="1.2.0"; sha256="0pnyk05fri2pgin9ppyq2lk5rsc4cays5za6vhgdsjvv08sxyykz"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer]; }; - Guitar = derive2 { name="Guitar"; version="1.7.0"; sha256="0ld2ghyq3f02as01jzwkbc0wbly1g40bqy5mmvvrj87b8l235h10"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; - Gviz = derive2 { name="Gviz"; version="1.14.4"; sha256="16vca86mrpl2m9w0456cj7wj6dhdg0iqxj3z9dlia5wh56p00ryp"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HCsnip = derive2 { name="HCsnip"; version="1.10.0"; sha256="0x4lpx13bhr2w5yhrcsc89g0x4q1dy0j588h210ziizgh67qqcrs"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; }; - HDTD = derive2 { name="HDTD"; version="1.4.0"; sha256="0d3aycz0j34iqg8xqqnga8x6ynwn0b551qizpqby8j5whlrgdw76"; depends=[]; }; - HELP = derive2 { name="HELP"; version="1.28.0"; sha256="0m5hk3215q2gr59agzjzdbqkxkf292injxrn1ji1n29vbfzjhd41"; depends=[Biobase]; }; - HEM = derive2 { name="HEM"; version="1.42.0"; sha256="08xbpvw3bm3hsri7z8gvivffi99ai0b4a17jkah1siy5d3wnzvci"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.6.0"; sha256="0haxbzylzprcylc90aw9637g7isdvrd1j9936rnzjv442qp6a0i0"; depends=[]; }; - HMMcopy = derive2 { name="HMMcopy"; version="1.12.0"; sha256="1l0ynzk8cg9i1dcb2q724p0gk0gxcrcmr9ndlvjm1jq9f2cd9lma"; depends=[geneplotter IRanges]; }; - HTSFilter = derive2 { name="HTSFilter"; version="1.10.0"; sha256="0yfmjn1hq2dr8bh3f77kl0i4md18q4l6sfpvlsi7bf12r9cg3677"; depends=[Biobase DESeq DESeq2 edgeR]; }; - HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.22.0"; sha256="01mb273v1i9k0d2gbl9mpmr4rrnx49s3srv0yh1znvmwx0hmfyq2"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; - HTSeqGenie = derive2 { name="HTSeqGenie"; version="3.20.1"; sha256="0bg86jiv45899gw9x4hhvqf525vfwkzj2b5jk7026cq5vmjc0k5j"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead VariantAnnotation VariantTools]; }; - HTqPCR = derive2 { name="HTqPCR"; version="1.24.0"; sha256="1bjnirp3ha5ymnv1xyh02d77w7gp36qk62gjfzkbsnhwbwajpdkx"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harshlight = derive2 { name="Harshlight"; version="1.42.0"; sha256="1b2ggv680ckj0350a2y36vlm1dszk5gx3b60qf61cqb8a0mzcyb4"; depends=[affy altcdfenvs Biobase]; }; - Heatplus = derive2 { name="Heatplus"; version="2.16.0"; sha256="1mp31d9gd313kzx2d6nymapqxhzpd8n15li5xl52wq10w574lpc0"; depends=[RColorBrewer]; }; - HiTC = derive2 { name="HiTC"; version="1.14.0"; sha256="0vdlj9jslvqx73d766bn9zr8drnhd334n053xmc340s2vjs7s4nq"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.0.0"; sha256="03yb9w4qn7c1p4yvgkcf6bjq3ms52w9jydknjryzf65gciy9m2mj"; depends=[GenomicRanges HilbertVis IRanges png]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.28.0"; sha256="1shs6frmbfvkl8pg1nbiqlm5i9ngq6pin67gkxs5v8xw5q9rk7ya"; depends=[lattice]; }; - HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.28.1"; sha256="1hqfjy4c4vqyz62ycia8b696cglqxbav97cxbivd6f8a578a4d5f"; depends=[HilbertVis]; }; - HybridMTest = derive2 { name="HybridMTest"; version="1.14.0"; sha256="0mgdqp6s7lfywxqymap27lbz6hgmq6rczmy2dnhdk2wwl96gp68k"; depends=[Biobase fdrtool MASS survival]; }; - IMPCdata = derive2 { name="IMPCdata"; version="1.4.0"; sha256="06ch3cp15ffch82gdqiwnnlakshdl2mmvq99c9iq5prp89vk41d6"; depends=[rjson]; }; - INPower = derive2 { name="INPower"; version="1.6.0"; sha256="1jdsvglgipmzjjaz972b7xbcykynck4326r8d5bxm8yh2hv7nshv"; depends=[mvtnorm]; }; - INSPEcT = derive2 { name="INSPEcT"; version="1.0.0"; sha256="0a7jkw4wlp05aknzc9mf9r3kfrzgmhdjmykp796s3cyjjxksk74j"; depends=[Biobase BiocParallel deSolve GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve]; }; - IONiseR = derive2 { name="IONiseR"; version="1.0.1"; sha256="0qfvrzc0ik868160zz7pwlcq1mycf9ax0mdx5gv2zvqmaxibjkiz"; depends=[BiocGenerics Biostrings data_table dplyr ggplot2 magrittr rhdf5 ShortRead tidyr XVector]; }; - IPPD = derive2 { name="IPPD"; version="1.18.0"; sha256="1kl4rx6rdmpkm7bd2w8ncvz4sb8x6wljvxkif2l17yflsp1wjvp2"; depends=[bitops digest MASS Matrix XML]; }; - IRanges = derive2 { name="IRanges"; version="2.4.8"; sha256="0hi5k1j5jm4xrg1l506g279qw1xkvp1gg1zgsjzpbng4vx4k4iyl"; depends=[BiocGenerics S4Vectors]; }; - ITALICS = derive2 { name="ITALICS"; version="2.30.0"; sha256="0bm38swbkqnf6nq17p49bh1lvpdvyz4vqv645awmfb5h7sfkhc3v"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; - IVAS = derive2 { name="IVAS"; version="1.2.0"; sha256="05sm8zhjqm3b966s9hc9dmsxajzry60wcz1qbxn989nly270cnqh"; depends=[AnnotationDbi BiocGenerics doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges lme4 Matrix S4Vectors]; }; - Icens = derive2 { name="Icens"; version="1.42.0"; sha256="14a2fsddq2vq7b5yaairxg2p3ivrfck1r91sc2izbiyvkqk5qjb4"; depends=[survival]; }; - IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.14.0"; sha256="11rn1b6665b64h3a4mb8qkg5kp5l9ha6aa14f512k7lzs1vcczpm"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; - IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.18.2"; sha256="0wl2ybv23z84rlq2szk46kvcdm0bmqy0mjga9n33wz1c04br2bxj"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; - IdeoViz = derive2 { name="IdeoViz"; version="1.4.0"; sha256="17rdvqim46q3lwm4c4k1xyayn8x76v9sj34x2xsr7day1r5kssq3"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; - Imetagene = derive2 { name="Imetagene"; version="1.0.0"; sha256="1di9nx5ad0wd17byn740azx9yb6hd12dzvlfl8s5iyas4z9qzwya"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - InPAS = derive2 { name="InPAS"; version="1.2.1"; sha256="0vwzm9cf2zzc7pzw2xp7a7jpg9phzcskb6zm6jwx23p005pd8qv3"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; - IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.6.0"; sha256="1b7my9ri3kwi4rbdymcnwdjzv88pgdfjf2ax4gls0v4460hwg5az"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - KCsmart = derive2 { name="KCsmart"; version="2.28.0"; sha256="1bkc3ih97g0sr53wi4r0hdi6c46a7iabdsb7qy04mz7a8pa1g5ja"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.10.1"; sha256="05mn2wp5xg5xpwm8wdpzv4xhcrv08qmyqi5i3ssa46nj4yn8zcc4"; depends=[Biostrings httr png]; }; - KEGGgraph = derive2 { name="KEGGgraph"; version="1.28.0"; sha256="03lvm6qjalqwbi9i84b3glwf0kkagl3zh7cxhjd0jn7xzr20iw7q"; depends=[graph XML]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.12.0"; sha256="08yg0vn7d0yyamwj8s9bg9130y1dag34w5j9dhi00x7381jnrxwr"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png TeachingDemos XML]; }; - LBE = derive2 { name="LBE"; version="1.38.0"; sha256="0gsckpx2903pz55mjc8a3g3w4w3q58cly40mnjb82aqjc5vd8zzk"; depends=[]; }; - LEA = derive2 { name="LEA"; version="1.2.0"; sha256="1mq5yhs9gq321ngrfqra3isfjp5isxz00f14ify4h7wjn2w5abnp"; depends=[]; }; - LMGene = derive2 { name="LMGene"; version="2.26.0"; sha256="0mfs8kpirwkv8salg6aacy0hr0zwmmxr7pzh88sxj3x71k2dclzi"; depends=[affy Biobase multtest survival]; }; - LOLA = derive2 { name="LOLA"; version="1.0.0"; sha256="0lr8rzgzimmnwz9q0yyxxpa8prc06rzy1agz4in6r2iqjwpb9dq9"; depends=[data_table GenomicRanges IRanges]; }; - LPE = derive2 { name="LPE"; version="1.44.0"; sha256="16cynjjqzji4ys6k61p9wgrwz0bnvcrqadq32i49ppfyxnf248pd"; depends=[]; }; - LPEadj = derive2 { name="LPEadj"; version="1.30.0"; sha256="0ll9n3wkaink16laj2y98hb0kx5dglz776zlwdfkw54l1fjvvj5h"; depends=[LPE]; }; - LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.20.0"; sha256="1q43harvk7q5wb8yjffhvzs4dxl8h5vp60ngym5vcvapxr8iym3w"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; - LedPred = derive2 { name="LedPred"; version="1.2.0"; sha256="0zripgxpy0fr8d02k716frzbrrh1hdp85l7agk58yyhzw086b0bl"; depends=[akima e1071 GenomicRanges irr jsonlite plot3D plyr RCurl ROCR testthat]; }; - LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.24.0"; sha256="0h20asshxybng9apaqlvwfl30db7cwf2nqknwrd52rdh3b2x4025"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - LowMACA = derive2 { name="LowMACA"; version="1.2.0"; sha256="12jm8psg7rnrsxydcqzfgiryy6lk5mxyximfzn7hnqqvxbs3wc55"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - M3D = derive2 { name="M3D"; version="1.4.0"; sha256="088ghd9r5jr51179cj9hbk1dpj4f9fkrbgyghlq29w2bbgzc57xx"; depends=[BiSeq GenomicRanges IRanges]; }; - MAIT = derive2 { name="MAIT"; version="1.4.0"; sha256="0yhslwqij9b073if2zp7f9w4fcxx02w9qjp2sj29g9gj1xfyij5b"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; - MANOR = derive2 { name="MANOR"; version="1.42.0"; sha256="0k2mg4bchjaabbbxhnjgc0j3r10hngc1al06dp7077h1yqrcr9v2"; depends=[GLAD]; }; - MBASED = derive2 { name="MBASED"; version="1.4.0"; sha256="0v56m2cdwq59drqxnpg3cg8cmwkq75wzrscyj7ajy1zp71m4kn4b"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; - MBAmethyl = derive2 { name="MBAmethyl"; version="1.4.0"; sha256="0knn0fgrqmddwiyip49gchp5fzz77fb3fndhyddb0xw752nqvw8p"; depends=[]; }; - MBCB = derive2 { name="MBCB"; version="1.24.0"; sha256="1qryzcjf3w138n12amch1zq2nl5nvagqqv422kcladapaq2lsgi2"; depends=[preprocessCore tcltk2]; }; - MCRestimate = derive2 { name="MCRestimate"; version="2.26.0"; sha256="1igfffsgz6m4rl2a5fnkb92r5x4qjr2yl8gaj3ws8478q3aq0bgd"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; - MEAL = derive2 { name="MEAL"; version="1.0.3"; sha256="1jrg6vw34hc8cg1ifyihrvya40x3f6ad77vp56wxdizr2wqp6h3q"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 IRanges limma minfi S4Vectors SNPassoc snpStats sva vegan]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.20.1"; sha256="0p5cg0nak7b6dr6l3j2abpm45dg644gbwl4w50ksqc1ahjksh3ir"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; - MEDME = derive2 { name="MEDME"; version="1.30.0"; sha256="0j2zgd9lx3cbbv2vyqb4nd9rk3lxk33az50n8b9sn4cab7yws54x"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.4.0"; sha256="1nywi9cndvkabiryrq72vxgrhz9d8jvzjvzhz9i4mx6g8xvphjng"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.4.0"; sha256="1ffmz1cbk0bhswrjkjg1mg3cslmx2k2sxhhggv9s2wavx2s4q3ba"; depends=[annotate AnnotationDbi]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.8.0"; sha256="1kc7qszpcxp82f56yxa7s1bcs5wblm4ywj5izgdf981qq16d6s2h"; depends=[Biobase coda data_table Formula ggplot2 Kmisc MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.50.0"; sha256="16lf1hmjdmsh9r8qh9042k1rzvl8r39n71f2qs6ca79qcwpb9k6j"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rgl rpart sfsmisc shiny threejs]; }; - MLP = derive2 { name="MLP"; version="1.18.0"; sha256="1g45rnj58bkp7n6paz7713ny0lc6v7lxigqsnvq4w460sg9k060d"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="1.8.1"; sha256="0s324105s96jjasbbf9yri9bdkcwx8siwyg602fyrfkfh0888d3r"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; }; - MMDiff = derive2 { name="MMDiff"; version="1.10.0"; sha256="0v000a87ciw83xj6p2443k1zs1w98ax38nzaf643wqmb8szwr6vf"; depends=[Biobase DiffBind GenomicRanges GMD IRanges Rsamtools]; }; - MPFE = derive2 { name="MPFE"; version="1.6.0"; sha256="1n12bpb8jqddrcpdbbpfxzk4r44kg3p8bg8an5drzbv6rmyhdxwn"; depends=[]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.4.0"; sha256="0pb9i81pqnz05jrwqh9myz5zchdn8ng5nrsv3cmdg4713yskqpcw"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.4.0"; sha256="1hw40kyhkxm0iy60n3y1cw2k52q5vjl47k4z5x34syq5d14iplva"; depends=[mzID]; }; - MSnID = derive2 { name="MSnID"; version="1.4.0"; sha256="1my0kg8wi7f73sgy8brczkdxvjc2mslv3akk69bqw6j0lk1kaqir"; depends=[Biobase data_table doParallel foreach iterators MSnbase mzID ProtGenerics R_cache Rcpp reshape2]; }; - MSnbase = derive2 { name="MSnbase"; version="1.18.1"; sha256="09gv73ykvi6fcaxwclfmg99qbqwkxg8sn5b5nnwlyzin3g11fyq6"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp reshape2 S4Vectors vsn]; }; - MSstats = derive2 { name="MSstats"; version="3.2.1"; sha256="1zyxawn4zzfg6xdk2pawd5qdmfp9r98bvryb5qklbyqn0azakina"; depends=[data_table ggplot2 ggrepel gplots limma lme4 marray MSnbase preprocessCore Rcpp reshape reshape2 survival]; }; - MVCClass = derive2 { name="MVCClass"; version="1.44.0"; sha256="04mk9mp6kfjdbb1i9ivj1f2h5hm3nzhzznyc8w2vcihkf48gl89d"; depends=[]; }; - MantelCorr = derive2 { name="MantelCorr"; version="1.40.0"; sha256="00603yxak0c7pif6acccvzkhp0jsw2n22l7awc2v0za25xjwn3mr"; depends=[]; }; - MassArray = derive2 { name="MassArray"; version="1.22.0"; sha256="0z7na1ylvga5c42s0lh5shr1y316nla8rfd6wc9amkabsprfngqm"; depends=[]; }; - MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.36.0"; sha256="0gprvc3fflfxflx0d65sja569lf41rrdlfyggf3b2pvqvd59pyfv"; depends=[waveslim]; }; - MatrixRider = derive2 { name="MatrixRider"; version="1.2.0"; sha256="0ss39c235awrmqbkz3yzjly88dvp79bz4ycdz467rasd45wlvz64"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.6.0"; sha256="19c0llv894mdx52nqf7flz4bpxid5f6nsg535031prqgd2bdslnq"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; - MeSHSim = derive2 { name="MeSHSim"; version="1.2.0"; sha256="1wgc2s1080sm2dn9ny4c1kpbcmbv4gv91h7jmgya9p8lk224aasr"; depends=[RCurl XML]; }; - MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.42.0"; sha256="0x6jlza4ip0zscmmxlmy9w6r6cgpdawpxw00cvyrw4pswzhsaz03"; depends=[]; }; - MergeMaid = derive2 { name="MergeMaid"; version="2.42.0"; sha256="1ajmrcpvzfjk0bkm2v3yklry91w5cxpjhgjr9hfszzldfhh5sfw4"; depends=[Biobase MASS survival]; }; - Metab = derive2 { name="Metab"; version="1.4.1"; sha256="0wi45k7lx7f7y8bfpa4d1lggnkxlwwyjgzw22xyfw9yj40ma5x9g"; depends=[pander svDialogs xcms]; }; - MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.2.0"; sha256="1pykrqvblmxwbxwyps3gn2vm6ch6cn9199g6a1fix2dwj26y66yf"; depends=[Biostrings gplots seqinr stringr]; }; - MethylAid = derive2 { name="MethylAid"; version="1.4.0"; sha256="0k8vl8ijgdvci8j1nkq7d4j4naxgsz5wdac5zk093zzjfrq2xmmg"; depends=[Biobase BiocGenerics BiocParallel FDb_InfiniumMethylation_hg19 ggplot2 gridBase hexbin IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - MethylMix = derive2 { name="MethylMix"; version="1.4.0"; sha256="17f32y50aywvyhfm60rr7dyjq3y56i4bysdzmin5plqlyq0gmx30"; depends=[doParallel foreach optimx RColorBrewer RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.10.0"; sha256="0aa3p5qmprka7v6v3alhnag6qr853wvcib9vj0nj803saa34hil8"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; - Mfuzz = derive2 { name="Mfuzz"; version="2.30.0"; sha256="02a3xrsd3nzr278zq8j7s9bq89v30v5yxcdmzcf480n1pqw66ayz"; depends=[Biobase e1071 tkWidgets]; }; - MiChip = derive2 { name="MiChip"; version="1.24.0"; sha256="1jqhmrzi87g3fyfy0xbwcbkh5hhr9b1sa3lp9rxlxrijlxv35mb4"; depends=[Biobase]; }; - MiPP = derive2 { name="MiPP"; version="1.42.0"; sha256="07flpzyr9jj50789ap78an6qygb3y9b87dkaami6aadpphp2ggn0"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.12.0"; sha256="0j8qip9sz4ifk7p6a41258lsw26i92qcrl72h4y43l2bln4r74ng"; depends=[AnnotationDbi Biobase BiocGenerics]; }; - MineICA = derive2 { name="MineICA"; version="1.10.0"; sha256="1vdnc25wbbsdx4z9c8x0asar6a50hzwvlkxrgn10dlm96jihmgdf"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; - MinimumDistance = derive2 { name="MinimumDistance"; version="1.14.0"; sha256="0i3iag5a705q33vxqyb7pqpgmc8whpvy96yvidk2gyfh6lwqjsmn"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Mirsynergy = derive2 { name="Mirsynergy"; version="1.6.0"; sha256="0wb257fi5wygky6iqaxdhp8n3pxzknv1vy44ay55y0bal1nbkzwa"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; - MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.20.0"; sha256="1salsb4askcv6xgzfwcwxkrr8qx7pjzqgljbw3ips2f4n6vqvyzj"; depends=[Biobase lattice limma statmod vsn xtable]; }; - MoPS = derive2 { name="MoPS"; version="1.4.0"; sha256="07bylvhv1wnzj3z2ycw4rb29mlz34sbpksl0sdk47q9f5cjgvlnf"; depends=[Biobase]; }; - MotIV = derive2 { name="MotIV"; version="1.26.0"; sha256="0s26dklw8kav8lz0245as7y9znj4yfiknpmcgrdmm62rq04c11mp"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; - MotifDb = derive2 { name="MotifDb"; version="1.12.1"; sha256="0n3kh8k0gbdc571bb45argxwsv6waaalgf9b6rzd3prnizkxzq4q"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors]; }; - Mulcom = derive2 { name="Mulcom"; version="1.20.0"; sha256="0rf5haxfmf0zs42b9pinngbr4clnm0h707zplmig8dpaq5myski9"; depends=[Biobase fields]; }; - MultiMed = derive2 { name="MultiMed"; version="1.4.0"; sha256="0vd8akfy23rx37b98z9g7x7hz0xjba912kvkwcd9m0k6fv4n2s5g"; depends=[]; }; - NCIgraph = derive2 { name="NCIgraph"; version="1.18.0"; sha256="0ip8ds4jafb7nhfbz81gs9fl83a6b88di1z3nmkh31aqd4awrgim"; depends=[graph KEGGgraph R_methodsS3 RBGL RCytoscape]; }; - NGScopy = derive2 { name="NGScopy"; version="1.4.0"; sha256="1vs7mi0lb8jcm9yc0jz7rvdnj95fr06cf1jkb9p84pnm9vpn63d6"; depends=[changepoint rbamtools Xmisc]; }; - NOISeq = derive2 { name="NOISeq"; version="2.14.1"; sha256="1z8ka9rbs6q267g3cjmgvdvp5ramk3dnlwry46wswifqihalhf9p"; depends=[Biobase Matrix]; }; - NTW = derive2 { name="NTW"; version="1.20.0"; sha256="1p9hhjzh1mq907czbnjp7gg6n8ip4hzcq7x46bmmxpibi3wy64vp"; depends=[mvtnorm]; }; - NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.0.0"; sha256="11mdy4ms3fvia04njjxj35p1kgbl3i2wzgplzl42yymm61xgcar2"; depends=[Biobase matrixStats]; }; - NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.2.0"; sha256="1cbja0bi4sw3n4f1wkgbvmwh1hr49hhrybqxc6a7f8lvq11s28rf"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; - NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.14.0"; sha256="08nhw2ira3amjs9zl134afjqwi0hniq0g3mgmljjp1l0277b8acg"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.6.0"; sha256="0rvar97f22n2afy185521wqh2scmzgw5fj2pv5dzydn0ybfnpn3j"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.10.0"; sha256="001jdmc1qb2gcwkfy98az66b52hcp0cqvjqp0yzj598523983v5i"; depends=[graph igraph seriation]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.16.0"; sha256="16mm6b656gamvlr3gj5l7957h5fvzz221vggfjvab92khp3p8c16"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; - NuPoP = derive2 { name="NuPoP"; version="1.20.0"; sha256="0wy63x8jdlldb8f28csm611fx7sahvkz1g0gcslp4babsm3368y6"; depends=[]; }; - OCplus = derive2 { name="OCplus"; version="1.44.0"; sha256="05v5fdcgkigisrpfyka8k7caz739ys1ycy8lljqj6ivq94gmi44m"; depends=[akima multtest]; }; - OGSA = derive2 { name="OGSA"; version="1.0.0"; sha256="058lfd60w905jvhq99dsdcvl1q6h9dnwhqdqn942yr54jlkc7fjy"; depends=[Biobase gplots limma]; }; - OLIN = derive2 { name="OLIN"; version="1.48.0"; sha256="1qqvxl8xw02xawxgb82fnxjkss5cy813li4vp7wc70srcxyd1j63"; depends=[limma locfit marray]; }; - OLINgui = derive2 { name="OLINgui"; version="1.44.0"; sha256="0477llp7g2bs7h4756qildpscllk5wdk303gkaaiv5ap6n8s8smj"; depends=[marray OLIN tkWidgets widgetTools]; }; - OSAT = derive2 { name="OSAT"; version="1.18.0"; sha256="063jpwmhsnhi7al88mwcgbnd9azn2z3afxnjd2syf0mv156v86j0"; depends=[]; }; - OTUbase = derive2 { name="OTUbase"; version="1.20.0"; sha256="0h9fgnc0saz8gsx6wgjigs4aiacbw03vzzxfc04wzfcdjgcm731p"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OmicCircos = derive2 { name="OmicCircos"; version="1.8.1"; sha256="1xmf4wbij8lczj8jp1vj546gzv6210qcx30dpf4f3zqy083d583v"; depends=[GenomicRanges]; }; - OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.2.0"; sha256="1r4qn2p5fxyi6r9l7zgbga1n5wcy18whcvyx0cwrr7lawbzjn6yg"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.0.0"; sha256="1q2kwszqf1ki8whchbx537sv6gah4ibclabhkgycd183rd0jv71r"; depends=[data_table graph gtools igraph Rcpp Rgraphviz]; }; - OperaMate = derive2 { name="OperaMate"; version="1.2.3"; sha256="1zgqf2ywazrxc66l2x8280izrzanan51b8vz5jwy8i7gnrm4gaa0"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; }; - OrderedList = derive2 { name="OrderedList"; version="1.42.0"; sha256="0jk753xfyksv3vcgxd3z7nwh9cnjfdljzma4vc7kkdsblx5mpjyi"; depends=[Biobase twilight]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.12.1"; sha256="1rda35kjh3l5w5dz153x4p6adwm8apkljg5021a1rcs2x58q6z91"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller GenomicFeatures GenomicRanges graph IRanges RBGL RSQLite S4Vectors]; }; - Oscope = derive2 { name="Oscope"; version="1.0.0"; sha256="08gyfjkimv8fj54kfnalpy1v72sv8vr0pjxyj52sb0hh0xcj2jqk"; depends=[BiocParallel cluster EBSeq testthat]; }; - OutlierD = derive2 { name="OutlierD"; version="1.34.0"; sha256="19wrakxv833r5jqcrk627kgn6pissna9xdfnhn389a0j50xb02is"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.4.1"; sha256="1g1yv95p9i58c4w3nsg490mn4c5qh4q4lfx1jj1ff7h3w7i6ds9d"; depends=[e1071 gplots limma MASS mRMRe randomForest Rcpp ROCR sva]; }; - PADOG = derive2 { name="PADOG"; version="1.12.0"; sha256="0qswjj0iskdinap0mdgh1vpsjx80hs5g1ikm7r3yrz3784577ji8"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; - PANR = derive2 { name="PANR"; version="1.16.0"; sha256="19q7vxhq2kazjf3wxvzl0cvfyd49b00r0daf7vgzjv1smjq1czhq"; depends=[igraph MASS pvclust RedeR]; }; - PAPi = derive2 { name="PAPi"; version="1.10.0"; sha256="0q90yi4s3jln713cpylgan7fzw7c536kw7bqlnkkaw6rjj1k6vvg"; depends=[KEGGREST svDialogs]; }; - PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.34.0"; sha256="086hgqx9svn1pfzcz6affj2p9kvjk5k4viqkmwknlk9smw53l40l"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - PCpheno = derive2 { name="PCpheno"; version="1.32.0"; sha256="023dkbi3r1bs9wiihx3rcdc1dx5w21pfmk0n3n7zan4k5jkz4rwx"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; - PECA = derive2 { name="PECA"; version="1.6.0"; sha256="00arj7ni6vdhsa3j9dvid997hqzw3kbznxgsfrjcda68gl28v8m0"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore]; }; - PGA = derive2 { name="PGA"; version="1.0.0"; sha256="1s4ddjlnxh1waw1sm428lnaq655qfzlmabcjgdm95fi2cg66vs86"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer stringr VariantAnnotation]; }; - PGSEA = derive2 { name="PGSEA"; version="1.44.0"; sha256="0cfz479nlmbal4bs5ah12q6jpp7989xic59rml87i19bcbhz8z26"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; - PICS = derive2 { name="PICS"; version="2.14.0"; sha256="01pc4nayj4iyrm18clb66f6f1a7y2w56l2z976xca86fhv6qgp4x"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; - PING = derive2 { name="PING"; version="2.14.0"; sha256="0gpc9x9qn1m1rqdls54yfqlph84937fb3f5mf89yi6zcjh41yhlb"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; - PLPE = derive2 { name="PLPE"; version="1.30.0"; sha256="0j6x0c7aigq5n2qwvn0bzcbzi8xqi9szbqfk58jr7ppgaxl1ljyw"; depends=[Biobase LPE MASS]; }; - PREDA = derive2 { name="PREDA"; version="1.16.0"; sha256="050a1a02ck11yklmd104b2hnal9q8g171nyq0qd1v1i2mhg02jyn"; depends=[annotate Biobase lokern multtest]; }; - PROMISE = derive2 { name="PROMISE"; version="1.22.0"; sha256="12virpc3m8ikwkz600bfg1aycxxks6g8km6gd7y01yyxybsqjplq"; depends=[Biobase GSEABase]; }; - PROPER = derive2 { name="PROPER"; version="1.2.0"; sha256="1xhq14wpd9j9g0zzb99mib46miciw6dhp4gvkpdvlfwhh3j8m8fb"; depends=[edgeR]; }; - PROcess = derive2 { name="PROcess"; version="1.46.0"; sha256="0ysp2f2kx5p701ww81ip8n4617qs6rcjfrj62657j143ajz27py3"; depends=[Icens]; }; - PSEA = derive2 { name="PSEA"; version="1.4.0"; sha256="1df2v472s2g4qcylvg9y5gahgjzq0m753j65736c8lc7g2zbpacp"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.8.3"; sha256="1g3xkbgr3by0gd8ngiavxyy14ixdhrwcf5ka329k3129d816425p"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; - PWMEnrich = derive2 { name="PWMEnrich"; version="4.6.0"; sha256="0gvnky8k6v518g2a4lrvb5w7s1m3icckmlvyxcbvxdfyb5krdzh2"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; - Path2PPI = derive2 { name="Path2PPI"; version="1.0.0"; sha256="15cf7r1aswc1agdkc7k8dbazscqnyrbfg68ms248gri3qrplkq0k"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.10.0"; sha256="07b6c8ry6a0ni8c88wccv69ksk5c6w3wwwp6cl3gcm7kv7r2qd00"; depends=[]; }; - Pbase = derive2 { name="Pbase"; version="0.10.0"; sha256="02b2vw63gwssy6bz8v6dvfmz2ak5pa7wzz341nrbr3mwv0k27j4q"; depends=[Biobase BiocGenerics biomaRt Biostrings cleaver GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; - PhenStat = derive2 { name="PhenStat"; version="2.4.0"; sha256="02x8502j7c8jb9xpy01dlr89qwhlakzvn7rhl4mb8qd37lrvc3kf"; depends=[car logistf MASS nlme nortest]; }; - Polyfit = derive2 { name="Polyfit"; version="1.4.0"; sha256="0rhs81hclz59nqirpp9y5n7qmg343s260n1gv8ma3c8j2jicb333"; depends=[DESeq]; }; - Prize = derive2 { name="Prize"; version="1.0.0"; sha256="1a9hvhpa29ns7lhzmdqjlasp6rwrzng8klaw9cz54vdvc7al49wn"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; - ProCoNA = derive2 { name="ProCoNA"; version="1.8.0"; sha256="0j0ld484cd98304fncyixi86qnxh72m8s83xxyk8c81kf7lzvhw1"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; - Prostar = derive2 { name="Prostar"; version="1.0.1"; sha256="1rnbx41f07c9y6ba7p9lb6wi22kf3w5jg8h8di3grfgyq4dw3n39"; depends=[DAPAR data_table quantmod rhandsontable shiny shinyTree]; }; - ProtGenerics = derive2 { name="ProtGenerics"; version="1.2.1"; sha256="1hrds64ijygmilig3l99aj5cqqp8cr74x1jfs5qfw9xkma0ggz3r"; depends=[BiocGenerics]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.0.0"; sha256="1ss1kamy3djmxvr838bkh6jd93br8hql9a3aanqml7fzz3pvdq1p"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR]; }; - Pviz = derive2 { name="Pviz"; version="1.4.0"; sha256="02p4l8svrmh0jh1xlgngbdc0h96m2jw15x1ld05p23acj44sacgh"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; - QDNAseq = derive2 { name="QDNAseq"; version="1.6.1"; sha256="1jbnmvf3i4kimk7s558sbvkb0l6gb8hsbfvxdw93sfk4dwsi5c12"; depends=[Biobase CGHbase CGHcall DNAcopy matrixStats R_utils Rsamtools]; }; - QUALIFIER = derive2 { name="QUALIFIER"; version="1.14.1"; sha256="1h87y2q8x4ri6sv7nbppzpqa96m99mijq1739h8cfab5wmi0bcl5"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.2.0"; sha256="0nx3a9jsp2rq61jszm6kgpbqi9m5jkqfvk94npp7nk3qwhfi00j8"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.10.1"; sha256="1sdk1kh8365bp8w8xl06lhqdw0kprqj4gvwhw46lyiw1r3xapqd5"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; - R3CPET = derive2 { name="R3CPET"; version="1.2.0"; sha256="10ps9l6cc61m32a5b0b0y51sf8ci8drrpk02781p3i23jyamx8gz"; depends=[clues clValid data_table GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; - R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.20.0"; sha256="118gdmlqgy6nn55vq7nvyqvlwbg2vca7fkw0gjvb63ymv8lhfm7p"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; - RBGL = derive2 { name="RBGL"; version="1.46.0"; sha256="1zl2cvzhrm01hkqvzqrf37bnh0snm49594lk6ydiafn3s31rhk6f"; depends=[graph]; }; - RBM = derive2 { name="RBM"; version="1.2.0"; sha256="148is7ddwj8siik6a6svghnyl3ix8yf6ywnp90fxb8x0c5yknvmm"; depends=[limma marray]; }; - RBioinf = derive2 { name="RBioinf"; version="1.30.0"; sha256="038xqmbsajkcj5s0pjv0jb9lizq555kxabxjj3pgipjbqfjbj0xg"; depends=[graph]; }; - RCASPAR = derive2 { name="RCASPAR"; version="1.16.0"; sha256="0rliirdsd89lzr4ych9r7x90d4nzz1p036cmj8k01lzs6nvckh05"; depends=[]; }; - RCy3 = derive2 { name="RCy3"; version="1.0.1"; sha256="0bqn2k7k1007ih48inmdjnl0pan2q86p9p4c8hkbgv6r2alxc0d1"; depends=[graph httr RCurl RJSONIO]; }; - RCyjs = derive2 { name="RCyjs"; version="1.2.3"; sha256="1z3a80j9wcr2jsv35chqqqc95dcjsmz48hylvc432p2jwy572phn"; depends=[BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; }; - RCytoscape = derive2 { name="RCytoscape"; version="1.20.1"; sha256="1ymbj8xlny9bsbcxyvg9si7v2rlc7bw3sq0424bsfc92l3as0rjj"; depends=[BiocGenerics graph]; }; - RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.8.0"; sha256="1f92a80zksp90wlj2iymdf20hqkbp1aw7mdb7w5r19zckskcrg1m"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; - RDRToolbox = derive2 { name="RDRToolbox"; version="1.20.0"; sha256="1an5sz2lcq9n0h0i8s6g9jqaskbi7drwib8a1zwlpim1f399h45d"; depends=[MASS rgl]; }; - REDseq = derive2 { name="REDseq"; version="1.16.0"; sha256="13lglqabk3ij37i469s40gagb57z7mqcmdwahvf60rrgxvhbxkwz"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - RGSEA = derive2 { name="RGSEA"; version="1.4.0"; sha256="1dqw1vppxsr14sr94sz4ca2vacky70r0ingkq8cghsbvwp73i6vp"; depends=[BiocGenerics]; }; - RGalaxy = derive2 { name="RGalaxy"; version="1.14.0"; sha256="1g63kmfywmnjammifjkqiy8cnqvb77d2x4yff8bgz2ib60gyqm14"; depends=[Biobase BiocGenerics digest optparse roxygen2 XML]; }; - RIPSeeker = derive2 { name="RIPSeeker"; version="1.10.0"; sha256="09pr25pf488vdim3k6mvbvqqyxhl2dfs4y699x8xyhym34c74xcj"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer SummarizedExperiment]; }; - RLMM = derive2 { name="RLMM"; version="1.32.0"; sha256="15hkzfsr3qpyd72m5bf208ivcki1dkk5qigz6dxshqy803ax60ca"; depends=[MASS]; }; - RMassBank = derive2 { name="RMassBank"; version="1.12.0"; sha256="1rsvdai5fhkx9pgj14mm2x1xr4h8l0ppakxp8j3aicih92cvdd55"; depends=[mzR rcdk Rcpp RCurl rjson XML yaml]; }; - RNASeqPower = derive2 { name="RNASeqPower"; version="1.10.0"; sha256="16nhhmww8awf5rp6j8hrmz9riw4gppmvd4a2vlp57sr6y82krlsz"; depends=[]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.18.0"; sha256="0v7hz20nsc2dkb4xjzdhib2rj8k9zkn2c71rhg46b6hy3jxrm7m1"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.18.4"; sha256="15kr629g5l6isa4069fibgdh9j5zkmjll5anpigfbmdb85dhwlbc"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; - RNAprobR = derive2 { name="RNAprobR"; version="1.2.0"; sha256="017sc7ba5kw55rc74acv3i5i0mg7h5hblaqxy4j2ln6iqm1h38fi"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges plyr Rsamtools rtracklayer]; }; - ROC = derive2 { name="ROC"; version="1.46.0"; sha256="15m52d3z10nrzh7slc6b7js1dybh0dg4pd6nnjbjkc2m5axra09g"; depends=[]; }; - ROntoTools = derive2 { name="ROntoTools"; version="1.10.0"; sha256="0bsab4glgazf3x2rg96shks4vqkarqpls71699q7v7zaw7ay7hra"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.26.0"; sha256="09mjbxxx2ggf3c3v8d2wxvgpp14fmhp7yv9w1vxdj4kbzpdagpz0"; depends=[affy]; }; - RRHO = derive2 { name="RRHO"; version="1.10.0"; sha256="11iarlljr6lrq6nf36pdxf7p54mk6xwsz8ssfsg8zmpcpvb8adgc"; depends=[VennDiagram]; }; - RSVSim = derive2 { name="RSVSim"; version="1.10.0"; sha256="1ipzsgm7p2xf8v3asc6gcwvl6gnrn8nkg45iyl948kgys9izrng3"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; - RTCA = derive2 { name="RTCA"; version="1.22.0"; sha256="1rwgrac92n7ghk417sj3p80ahlnn8c9nq8af999a825bjbi90qd5"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.0.2"; sha256="14lxdzrii9xvpjvflqim2kasx2xd5pk9rijpad2pkm8yq5cs662p"; depends=[assertthat data_table knitr magrittr rvest stringi XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.0.0"; sha256="0bwdh52qsl2bawr8s4q92mrx1wn4yyc4qbag97w469ixlsr7fcx2"; depends=[data_table limma RCircos RCurl RJSONIO survival XML]; }; - RTN = derive2 { name="RTN"; version="1.8.4"; sha256="17znp5k4jrxnl3iq5mlljkjzm5lhi5a5pw06gkd081zs6bwhi9v3"; depends=[car data_table ff igraph IRanges limma minet RedeR snow]; }; - RTopper = derive2 { name="RTopper"; version="1.16.0"; sha256="0ikhlz9fa21ij9ikira4grc6fahjd8n2fwsdgkxr058zlzyw0c7b"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.4.0"; sha256="0xqma406k3sd47r830jc00al2xmx3wmfg5q0zk3b29bxiklj5w4f"; depends=[Biobase EDASeq edgeR MASS]; }; - RUVcorr = derive2 { name="RUVcorr"; version="1.2.0"; sha256="1iaja7xcmih63vp9g4km8yx2rrafkybp3azrxw5i28sv1hl7187j"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; - RUVnormalize = derive2 { name="RUVnormalize"; version="1.4.1"; sha256="13ksgz1givgy3ws97xa1x8v96ikpia5s9675l3xkz1fzsm3wmbzi"; depends=[Biobase RUVnormalizeData]; }; - RWebServices = derive2 { name="RWebServices"; version="1.34.0"; sha256="05czankzfvgsfrs2am8dkglzcix22s7gc4bgci0a66x8z31dlkx0"; depends=[RCurl SJava TypeInfo]; }; - RamiGO = derive2 { name="RamiGO"; version="1.16.0"; sha256="12mwfcljw323aqpzc4z5hl2h5qy51bpi5z59x4hx8inw3vc3n55y"; depends=[graph gsubfn igraph png RCurl RCytoscape]; }; - RankProd = derive2 { name="RankProd"; version="2.42.0"; sha256="0ma0mmj335v04bx96wssas81hx9apv6gv9y54cgac4n6v1ci9a9y"; depends=[]; }; - RareVariantVis = derive2 { name="RareVariantVis"; version="1.2.0"; sha256="1azfhbb9hpahpglwal4qd8c91zkjhda42ljn2jjd8ylvl4mgzv96"; depends=[BiocGenerics GenomeInfoDb GenomicRanges googleVis IRanges S4Vectors VariantAnnotation]; }; - Rariant = derive2 { name="Rariant"; version="1.6.1"; sha256="00q303w8gmp7p8s0k10l6w524d1yjjxhwckgg7g34hgvak75dqdg"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; - RbcBook1 = derive2 { name="RbcBook1"; version="1.38.0"; sha256="1pg6bg2q9whz4g0483ll3l71w7jiy68xd8l71vgr8zy0nip1kmg1"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.10.0"; sha256="1pdkircilkk9cnb556jmmany1c1xjg29blrs0knribzn6h6bm76s"; depends=[]; }; - Rcade = derive2 { name="Rcade"; version="1.12.0"; sha256="08q62agkyb810b0hfvs9vb9rh0ls8zrz83558xprijjizrkg9cg2"; depends=[baySeq GenomicRanges plotrix rgl Rsamtools S4Vectors]; }; - Rchemcpp = derive2 { name="Rchemcpp"; version="2.8.0"; sha256="0zz9s3zvxgs6mpiq085zy20sqajyx1645cz3848h2l0w1w5m6lga"; depends=[ChemmineR Rcpp]; }; - RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.10.0"; sha256="0cmyjyr3dn8df9ss4zhhm6y1lhf68msl5br070x01i8kgh4dagky"; depends=[flowType graph Rgraphviz sfsmisc]; }; - Rcpi = derive2 { name="Rcpi"; version="1.6.0"; sha256="19h9zxkb4zw9c46fvd0yn7bzy03a73glc4yyla0fzrngk1vs2s5q"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; - Rdisop = derive2 { name="Rdisop"; version="1.30.0"; sha256="0v9dm982y2f6gd4lxr2c123a4ijsa8sbn6mkcchwlli8hbxxvpcf"; depends=[Rcpp RcppClassic]; }; - ReQON = derive2 { name="ReQON"; version="1.16.0"; sha256="1j79vmhk34argysbjyxcsmfjsplkxq4cn8gprm6min1v08xzryg0"; depends=[rJava Rsamtools seqbias]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.14.4"; sha256="1dywrigxh29i50k607fi4p33dxjw2dlm5q86i0400l99lp0xj0di"; depends=[AnnotationDbi DOSE graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.16.0"; sha256="04d3gam21cia44w7wz1ai8a60igsbjslac25rb7z5i9ijbx8jk9q"; depends=[affy Biobase]; }; - RedeR = derive2 { name="RedeR"; version="1.18.1"; sha256="0arhg8zav0h3ivinnyl6b4z85b4l3w9vlzxiixnwzdmnr2ch78dc"; depends=[igraph pvclust RCurl XML]; }; - RefNet = derive2 { name="RefNet"; version="1.6.1"; sha256="0l0krjjk1jld7z5zy6k3z6m2qkqd86yj92xfck75q3bq3jm96h0j"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; - RefPlus = derive2 { name="RefPlus"; version="1.40.0"; sha256="13qlm4smaafx1x78wn959wc1rm4wns7l6qgdmh1lg5khkrrh3x19"; depends=[affy affyPLM Biobase preprocessCore]; }; - Repitools = derive2 { name="Repitools"; version="1.16.0"; sha256="1jsimbrnfzvdydb4s6zvimj58gpxyydyngq2dflacg1gd7msq66a"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; - ReportingTools = derive2 { name="ReportingTools"; version="2.10.0"; sha256="1zlxr7z7c3vlkbmpcmw88a9caaf1gwhh8jv31fg2njy60vysb0m0"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.14.0"; sha256="0lwg57kja3r7ij1d3yp5g3r0zbzn2nannlvsh029sd626yfp6fb6"; depends=[graph]; }; - Rhtslib = derive2 { name="Rhtslib"; version="1.2.1"; sha256="0x7x8sbzjxssnnfa43kh38nlkqz6qvj41xdbgniyp7b6kyyr0na4"; depends=[zlibbioc]; }; - RiboProfiling = derive2 { name="RiboProfiling"; version="1.0.3"; sha256="096lpmrdwbsw71k4qdx9d0zgs83r0ixphkg60p40vgvpmhq1c3dh"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors]; }; - Ringo = derive2 { name="Ringo"; version="1.34.0"; sha256="0r549n840sq9whaz8nk7rz3wardxc8jvwdni4bd5f7zzrhj0ynhl"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.12.0"; sha256="0s23fbdk1v1cg0c67vhkz53wava1swjig8fz8jsv8av0pqb0rg17"; depends=[affy Biobase biocViews Rcpp xcms]; }; - Rmagpie = derive2 { name="Rmagpie"; version="1.26.0"; sha256="1iwiy8d5cvrmk6jgwaplx980gzdgxp9k53zjwmzya8bar7386sgs"; depends=[Biobase e1071 kernlab pamr]; }; - RmiR = derive2 { name="RmiR"; version="1.26.0"; sha256="1nnpr5jp5anbqbgyg53qqjhi49bibymc0l3yj6ar5d6csavrympb"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; - RnBeads = derive2 { name="RnBeads"; version="1.2.2"; sha256="1nn64lqnzvvlms8m0i3rn5mrp12xxjra8wssabbbnbdg60a1g7i1"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr RColorBrewer]; }; - RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.2.0"; sha256="11zkq3i8pn9qfs8qynnrlfmr9fdnmqayqmgxzw54fzpj62b0y894"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; - Rnits = derive2 { name="Rnits"; version="1.4.0"; sha256="0igqimvync5sz1hsn3m9ijivw1vxi8vjpsdcjzf9dkyqhkand6r3"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; - Roleswitch = derive2 { name="Roleswitch"; version="1.8.0"; sha256="0libkpp9scrbakhzp030bx86f4np6ijn01r8xzn02f5106h23gz7"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; - Rolexa = derive2 { name="Rolexa"; version="1.26.0"; sha256="184v27zycmqnj4fpjgrxl3vcxxfxwkbfqdzm6wsyxixm93rmz7v4"; depends=[Biostrings IRanges mclust ShortRead]; }; - RpsiXML = derive2 { name="RpsiXML"; version="2.12.0"; sha256="0zlcr1f5sf98bwxakbmq33kniwlpxcc32z5fz7vqsasyv5vbz1ks"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.4.2"; sha256="0kmp69c2hinfh5bn8ka5rsd4fl14gh4xjj24gw5kasjfbhy5l90x"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="1.22.0"; sha256="1yc3nzzms3igjwr4l9yd3wdac95glcs08b4cfp7disyly0wcskjd"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="1.20.3"; sha256="0i0dns4392cflajx58x3wy8m6fbh4pb6vyiliisws1cxdq3yilk4"; depends=[]; }; - Rtreemix = derive2 { name="Rtreemix"; version="1.32.0"; sha256="0snj644rc6cyjcswckz88fihd6ynjq3sj7qf733vbvqj8d12dqk8"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.8.11"; sha256="12iibcs63m9iy7f45wgjcqsna2dnqwckphk682389grshz0g4x66"; depends=[BiocGenerics]; }; - SAGx = derive2 { name="SAGx"; version="1.44.0"; sha256="0rrw1y80ybpskwvcdbyqq8m4d17sz07bv9gpa27rvfq2sy4znsk6"; depends=[Biobase multtest]; }; - SANTA = derive2 { name="SANTA"; version="2.8.0"; sha256="1dlc6m8lq9cyvxqrp0gnrfx1ksfl5p2hvgl5n67sag3z40vdhflc"; depends=[igraph Matrix snow]; }; - SBMLR = derive2 { name="SBMLR"; version="1.66.0"; sha256="0xa9s382nd8gpkx2lp02iarjqqs2w4qp6xzg9sy654yg4iyjmnms"; depends=[deSolve XML]; }; - SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.12.1"; sha256="0z5qp738xwwnsiv5bygfyljxld0vw805xl3plh5wrwy9gsxn2c7v"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SELEX = derive2 { name="SELEX"; version="1.2.0"; sha256="019142j9x7p38mi3wvzxm138s9cmq8ljkb5i5lk5pj1z8cc3ci0d"; depends=[Biostrings rJava]; }; - SEPA = derive2 { name="SEPA"; version="1.0.0"; sha256="1hvkz3pyp8qkq1mjw9wl426db6n3ay05bx2djkdpvpbai4fjwgvc"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; - SGSeq = derive2 { name="SGSeq"; version="1.4.3"; sha256="09x0mw1xil0p3742w031ljrh5ywr1axsakw7j6300v98j87l2ymv"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; - SICtools = derive2 { name="SICtools"; version="1.0.0"; sha256="16yzykl4s1b2nkgarxsrgvk6cvjdfla3x3ijjn1yxj22wjdzfg9m"; depends=[Biostrings doMC foreach GenomicRanges IRanges matrixStats Rsamtools stringr]; }; - SIM = derive2 { name="SIM"; version="1.40.0"; sha256="02v2fi0yw1sxj5f41h7lihs96y9crca2srwflpdjif8sx6pk6yvq"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.2.0"; sha256="1qwird1yqwdh7085d4k7zgy1ld0c6215ks6i3d3d71pwg22agiw4"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SISPA = derive2 { name="SISPA"; version="1.0.0"; sha256="01kf83hlc7qyyxr4dx86m9vc16cydrkw4sajs2ikpn2fnrqkx6z1"; depends=[changepoint data_table ggplot2 GSVA plyr]; }; - SJava = derive2 { name="SJava"; version="0.96.0"; sha256="17qvrd8n0vrn9fn9p31s2bhzf6064hnf89c54hbx3flzki73waaz"; depends=[]; }; - SLGI = derive2 { name="SLGI"; version="1.30.0"; sha256="1pardqmvmi4877q09n3379wq57pyqla53s8gxvygrqny2drb5crj"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; - SLqPCR = derive2 { name="SLqPCR"; version="1.36.0"; sha256="02i77a1rrz46sgrji57nm92d6w50wcwdagxa6y2a6rdcjcv2g66n"; depends=[]; }; - SMAP = derive2 { name="SMAP"; version="1.34.0"; sha256="07mdnmirsbz8m5zky169q2mqdn1sdh1nlx8qsgdf8h0n0vcs2h3z"; depends=[]; }; - SNAGEE = derive2 { name="SNAGEE"; version="1.10.0"; sha256="187xcsdpbjdiabzjg3gggnz1rcwgjzj4279i26h879ijs7hli19w"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.4.2"; sha256="0iy4y58bhkr6ig1n2arw7pra29fsrxp10kzf9a479jrn3jdxxb0q"; depends=[gdsfmt]; }; - SNPchip = derive2 { name="SNPchip"; version="2.16.0"; sha256="1fxskvkzn0mfcg2zjs2r2fr0pifrha54a15vbxxcawy4pggf7fdv"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses SummarizedExperiment]; }; - SNPhood = derive2 { name="SNPhood"; version="1.0.7"; sha256="1kr86xm2w6pmwbglhl97qpxyzsyqzrkzkjav6dm0zqn24f1q9579"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools VariantAnnotation]; }; - SPEM = derive2 { name="SPEM"; version="1.10.0"; sha256="1b6r9x5q06ai6fh99a0qcx3lnjdqip7vhy32i38s16ixw9g94rcf"; depends=[Biobase Rsolnp]; }; - SPIA = derive2 { name="SPIA"; version="2.22.0"; sha256="0103aapq3p6il4acaa9fna1a5iri3fb656r60xg6ljyywcgy55yl"; depends=[KEGGgraph]; }; - SQUADD = derive2 { name="SQUADD"; version="1.20.0"; sha256="1nxf68waqnm9jaj0r8z1499kw5c6l1sykj38wikcc39bsyy23kxm"; depends=[RColorBrewer]; }; - SRAdb = derive2 { name="SRAdb"; version="1.28.0"; sha256="0savk9qi8x2vyrn2f29pzjd14ngczw3qidfggqwksayd2kx4nh1j"; depends=[GEOquery graph RCurl RSQLite]; }; - SSPA = derive2 { name="SSPA"; version="2.10.0"; sha256="1835g6chjrl1kz5zc710jy0lx04b84khk2kx981ga6rmlihn5xyc"; depends=[lattice limma qvalue]; }; - STAN = derive2 { name="STAN"; version="1.4.0"; sha256="0phrznzv3n9nvjbxb172ywxcc6dfjz2gw21w4nzxiwcjaf3kg841"; depends=[Rsolnp]; }; - STATegRa = derive2 { name="STATegRa"; version="1.4.0"; sha256="1nw4r8h8gv8y8a6qhh8gnsdc7pyp3h762ayhgkjy844kmxn316ad"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; - STRINGdb = derive2 { name="STRINGdb"; version="1.10.1"; sha256="0wj8rrm7syvgisv6cn7zh81fpg33qbyzacv69d96wdwp8jsspdh2"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - SVM2CRM = derive2 { name="SVM2CRM"; version="1.2.0"; sha256="06jhyvq3j35skvkf57iqfphypsv43k12i0wybhhvx4wjsdrrhmwq"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.0.3"; sha256="03p18b0kz33g7jldynxsk561xrrl547m3w7cb2gq766k56fv93m6"; depends=[data_table reshape2]; }; - SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.24.0"; sha256="1bpaz8vzk3iysbcsdky2vcwvkc38m66b4bh1jnxgh6ld318pkllz"; depends=[]; }; - ScISI = derive2 { name="ScISI"; version="1.42.0"; sha256="0bmpl2zaalwxhhc9vj9v3x8ig6hbj4lrbfl2dxmivgsh1hqvbcli"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; - SemDist = derive2 { name="SemDist"; version="1.4.0"; sha256="13wazcicjss3ybj20n958qjxk34aylpza4nggk0np8bjs5460i6j"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.10.6"; sha256="1x9zf02h1x1sqypf5663hjl6xvq8d0q4h6ls1ndagkaqkrwqhgyd"; depends=[Biostrings gdsfmt GenomicRanges IRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - SeqGSEA = derive2 { name="SeqGSEA"; version="1.10.0"; sha256="02jbxncy2y2p7xg33xpv4hwcd8344qsfy3ibb9d4c8kf9b5wj9f1"; depends=[Biobase biomaRt DESeq doParallel]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.8.1"; sha256="1sgkcqhqhrxzipwcwn5kvhsns08dh1fdpd8xzhmzylsr5yb9cbsy"; depends=[Biobase gdsfmt GenomicRanges GWASExactHW IRanges S4Vectors SeqArray stringr VariantAnnotation]; }; - ShortRead = derive2 { name="ShortRead"; version="1.28.0"; sha256="00awzvdpd21shixcx03mjqz8bqww2z96ffkna2gpqh3f7d2pmhii"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; - SigCheck = derive2 { name="SigCheck"; version="2.2.1"; sha256="001i9izz5g9p8ymxicx884gsqc53jq6pck4al3s2i0y0mhv9dw8m"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; - SigFuge = derive2 { name="SigFuge"; version="1.8.0"; sha256="1bs55pc5z3x22708pdr551rxvq66i2xyi9l9j1i6vnl7h1433iy3"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; - SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.8.0"; sha256="1cyqlzb6vykxndslwvmj9sn7hzrq3lqjwsmvkvl7ivfigrslg142"; depends=[Biobase limma mclust Ringo]; }; - SomatiCA = derive2 { name="SomatiCA"; version="1.14.0"; sha256="0a6l05zvc8jkckaznflrkknm144179hp77ck0pwrcp2065bglb1z"; depends=[DNAcopy doParallel foreach GenomicRanges IRanges lars rebmix sn]; }; - SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.6.0"; sha256="14w5p7vv8nyxmbfc9yxsc21xrzi8rfylw0dcpkv0p1l431qc8icg"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.8.0"; sha256="11szjavnv8b3sdqdzda3vsx3rbzmnzdimm4b37lm3rfqzrs14qhc"; depends=[iPAC]; }; - SpeCond = derive2 { name="SpeCond"; version="1.24.0"; sha256="1a9nxq2zdv1qvqk5byi8nrazkgqkdna8i4h2vibng33cjzjvxrdv"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.10.0"; sha256="0p43f313qhhrpvkdsr7qzp825am6yv0cg1ypbw0kfbkgsysi7z5v"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - Starr = derive2 { name="Starr"; version="1.26.0"; sha256="0ra9x1kzr0r2wa1ihapzmldq0fdr91rfbbglmzjnq92wrw6rvkd2"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; - Streamer = derive2 { name="Streamer"; version="1.16.0"; sha256="09bjwj9ynhjl1lgwh4444xjs4l1vj8sar5d1ph1b12fl48rb62zm"; depends=[BiocGenerics graph RBGL]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.0.2"; sha256="1gpmh1mi70m5k5qnyjs1h0qn8ajrzalzic7k3762xchxsmmdvxn4"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.8.0"; sha256="1ldvv1028chnh8ng85534k924cgdmzqb3i18z6xpacsjgg5k7s7l"; depends=[biomaRt zoo]; }; - SwimR = derive2 { name="SwimR"; version="1.8.0"; sha256="0vwjrpm4qbhc8afv0zj0al3rv06izp649kz8h3pb1yixw4bwrxg8"; depends=[gplots heatmap_plus R2HTML signal]; }; - TCC = derive2 { name="TCC"; version="1.10.0"; sha256="1r56h2l2jcva4fi6yzch4rwllyp5hwvy93dn1rna9jjf8q5m4nkp"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="1.0.9"; sha256="12rg49xqfbgh1djirlj9bs29c6iksjs7szrd62lwpi9ljdn1sqsc"; depends=[affy Biobase BiocGenerics biomaRt coin ConsensusClusterPlus data_table devtools dnet doParallel downloader dplyr EDASeq edgeR genefilter GenomicFeatures GenomicRanges GGally ggplot2 gplots heatmap_plus igraph IRanges limma plyr RColorBrewer RCurl rjson rvest S4Vectors scales stringr SummarizedExperiment supraHex survival TxDb_Hsapiens_UCSC_hg19_knownGene xlsx XML xml2 xtable]; }; - TDARACNE = derive2 { name="TDARACNE"; version="1.20.0"; sha256="0jf89s2bnz8psd7vqh3l29ch5mb2ilky2jmv8db4kcqaw9157kn8"; depends=[Biobase GenKern Rgraphviz]; }; - TEQC = derive2 { name="TEQC"; version="3.10.0"; sha256="1kpibmaqqrdshbrw94080zxjlscfssddzjaqlx3l9zvhrw9sbl38"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.8.2"; sha256="1fnfm3masx093p879ak193v2nf62rlncq1j6wbjkhq61imyr02pm"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TIN = derive2 { name="TIN"; version="1.2.0"; sha256="051v518zyqz2lrp886hqapchngqxj2kz58dchjvafgaa2l5zyy9z"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; - TPP = derive2 { name="TPP"; version="2.0.3"; sha256="152hay6h8nwjp2yfqz8wl7y6jv32h6aq9kn58vsyrjaay6kd9v2g"; depends=[Biobase doParallel foreach ggplot2 gridExtra nls2 openxlsx plyr RColorBrewer RCurl reshape2 VennDiagram VGAM]; }; - TRONCO = derive2 { name="TRONCO"; version="2.2.0"; sha256="1ljciqm93iqr184pyyw1rdqdqllkk548zp68zpcvv91g7kdgf7ii"; depends=[bnlearn cgdsr doParallel ggplot2 gridExtra gtable igraph RColorBrewer reshape2 Rgraphviz scales xtable]; }; - TSCAN = derive2 { name="TSCAN"; version="1.8.0"; sha256="1cp723wp4g4g42l25p313lyc7hv4lp8fg95k60kpnqql356b0c7p"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; - TSSi = derive2 { name="TSSi"; version="1.16.0"; sha256="16cry226v35mjgw1w1sk4kgi8cjqwkls563y088mfz6fygfmg4ld"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.0.2"; sha256="1k9wf8q82yx6ygvxl9vaj8ypwaljxjv76jk8xwf994hxn1sjx7v4"; depends=[BiocGenerics BiocParallel cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; - TargetScore = derive2 { name="TargetScore"; version="1.8.0"; sha256="184n05p2c9g5yc53sx29dxq1pqa3appb2s7wr6n0271c08lkqc11"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.26.0"; sha256="1kk8qnrp8x4iijmkbqrvpyjvf7z8yd1jwp6mgjlqba5l09n65g29"; depends=[]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.8.0"; sha256="06i4gbpw356m9qxl5kj0xgnr6kvcl85qnq1z6aqjhy2x5qdiw92n"; depends=[foreach GenomeInfoDb IRanges Rsamtools]; }; - ToPASeq = derive2 { name="ToPASeq"; version="1.4.0"; sha256="18fwifmih7x4wr7s3nr8qwvxbp0a33qj39sfwkvhr97jqdggb78j"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields GenomicRanges graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz TeachingDemos]; }; - TransView = derive2 { name="TransView"; version="1.14.0"; sha256="02as66pzhgls2papji5mqpaczvdfpi6af0mafip8i9hj06z41wci"; depends=[GenomicRanges gplots IRanges Rsamtools zlibbioc]; }; - TurboNorm = derive2 { name="TurboNorm"; version="1.18.0"; sha256="145fb32c5zi7rhnqxad6nq1vx61vc1f28qjxvnccxxb2ia3b8jcd"; depends=[affy convert lattice limma marray]; }; - TypeInfo = derive2 { name="TypeInfo"; version="1.36.0"; sha256="0f0cllsf0pw2bgvq9fhfksqsxb2820js5y125vhcr0ns5kcvi07y"; depends=[]; }; - UNDO = derive2 { name="UNDO"; version="1.12.0"; sha256="1qz9md9j8jhrgl7iap6im4y08nwnydzgxpanpnpsaad1irrlgcaq"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.10.4"; sha256="0wx5jd45b69id7ffhyc8py15kw8nl0ii0j528xfw7m2x1xzydn6w"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; }; - VanillaICE = derive2 { name="VanillaICE"; version="1.32.2"; sha256="0qbj7rqhwmyz7dgljx6f9viy3gxnb2hnmnp8pnrj454l2hn30yj6"; depends=[Biobase BiocGenerics crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.16.4"; sha256="1z42j3p9b8h725inq8n0230llsdbav3gwcxy1nliypzfkxbzahsb"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.6.20"; sha256="1bfp9x4njgmzqc17c2mv5s9lvrzymjr2rjyhng5d8sq2ms7da9kp"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges graph Gviz IRanges RBGL Rsamtools RSQLite S4Vectors shiny VariantAnnotation XVector]; }; - VariantTools = derive2 { name="VariantTools"; version="1.12.0"; sha256="0c2sh4fda4gjxazxzd694a5cqj57mpa7f6hvafn6k40iz816x22f"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges gmapR IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - Vega = derive2 { name="Vega"; version="1.18.0"; sha256="0f7rzzckd69xbnism0v7jl0dly55lwj30nla7yj88qqalnb7ajzs"; depends=[]; }; - VegaMC = derive2 { name="VegaMC"; version="3.8.0"; sha256="004zx8hihj503g5fiq5njk09fns6ra7qvzbzb44q2dpd0n02ifqc"; depends=[Biobase biomaRt genoset]; }; - XBSeq = derive2 { name="XBSeq"; version="1.0.2"; sha256="01h3hj4mm7dr16vwbra5iazrgar9nbh2gs2gklyx0wqjfzm3gj49"; depends=[Biobase Delaporte DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma]; }; - XDE = derive2 { name="XDE"; version="2.16.0"; sha256="0zwp1vqjp3bfxvnkik9k57djnyf29qm57wlldv3zgk65lqxrdm5n"; depends=[Biobase BiocGenerics genefilter gtools MergeMaid mvtnorm]; }; - XVector = derive2 { name="XVector"; version="0.10.0"; sha256="0havwyr6xqk7w0rmbwfj9jq1djz7wzdz7w39adhklwzwz9l4ih3a"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; - a4 = derive2 { name="a4"; version="1.18.0"; sha256="07969ixxf20i2xh8c29s6qgghk7qndlc8b30w9ydq5yfd8v1wdys"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; - a4Base = derive2 { name="a4Base"; version="1.18.0"; sha256="1xqdkax03yqnzzyys3zdzndgzp5z52zpvbllqnnlhpf7j0wgqms4"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; - a4Classif = derive2 { name="a4Classif"; version="1.18.0"; sha256="1bci0b09h5622xn195mrf3s2h7mngjvnx7h5z4smykja7fxn839p"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; - a4Core = derive2 { name="a4Core"; version="1.18.0"; sha256="0zchs5rii0215x6vk3ma210l1j9m5hlmpfs973h3lia7qb2amjkp"; depends=[Biobase glmnet]; }; - a4Preproc = derive2 { name="a4Preproc"; version="1.18.0"; sha256="1hil6m4mqjw6ppn13ljpji1vdinsc6lsibknm974ykjjh1nkx9sx"; depends=[AnnotationDbi]; }; - a4Reporting = derive2 { name="a4Reporting"; version="1.18.0"; sha256="156l5qrhwlsr3vvxwpxzkgajb6pcz0ilfm4dw4jinm1kyy3k7fkr"; depends=[annaffy xtable]; }; - aCGH = derive2 { name="aCGH"; version="1.48.0"; sha256="0pch06jwwdn6s6cphrn4qn0syc47crliw9s5ii3dm03nh4z6p668"; depends=[Biobase cluster multtest survival]; }; - acde = derive2 { name="acde"; version="1.0.0"; sha256="039dy5ssrnf9i8ahjfmf18f3z8vk2x61zkx3snm27mr0vi7nw84n"; depends=[boot]; }; - adSplit = derive2 { name="adSplit"; version="1.40.0"; sha256="1djrgfspgi5aijpplqcq61mc4sbnfjj3rk1w3q714y2qazm0675i"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - affxparser = derive2 { name="affxparser"; version="1.42.0"; sha256="13asms378wid2kw0p2qz6q3bq6didpgkv58sbl6f8amcy5yxvkf9"; depends=[]; }; - affy = derive2 { name="affy"; version="1.48.0"; sha256="1k26qw2iirhsgfmkii49azcfki5hk9lpz6v9glayq78j3rspn1sk"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; }; - affyContam = derive2 { name="affyContam"; version="1.28.0"; sha256="04xq22z965pdh5sy5lgfh2asqjxydm4mzgkz6wqk479xfqdhny5k"; depends=[affy affydata Biobase]; }; - affyILM = derive2 { name="affyILM"; version="1.22.0"; sha256="0a51ynrzhb2w2gkgnnnyi36xljmkjkw954541ah82x5hq14aj0wc"; depends=[affxparser affy Biobase gcrma]; }; - affyPLM = derive2 { name="affyPLM"; version="1.46.0"; sha256="19ci6vc899j39s2w48f64wy9yl5ls8xmxv7gmdwk4dmp2xm6ys2h"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; - affyPara = derive2 { name="affyPara"; version="1.30.0"; sha256="14g7xrzsqqsr2h20nv000dd3v71wq18bq78r345w29fs53kipxxd"; depends=[affy affyio aplpack snow vsn]; }; - affyQCReport = derive2 { name="affyQCReport"; version="1.48.0"; sha256="0cw6z8idar5qa9y3svrm5fdimdamb2xjjj59d107h2in7bvgni7j"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; - affycomp = derive2 { name="affycomp"; version="1.46.0"; sha256="0irzcp3b070b4hm0x2cn8fxm9rn1nlgspjl3la37v4jpmvzldi90"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.42.0"; sha256="0b2wsxd293p8l7q6gci6gnqb0vw4r52mixrwz2af8cj6gs28l3vc"; depends=[affy AnnotationDbi Biobase gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools xtable]; }; - affyio = derive2 { name="affyio"; version="1.40.0"; sha256="0xza3c9b5a3ibwif7dl92gcj44yv56m9mw7fv00ldx2pygw20nyv"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.44.0"; sha256="0gs6yc9xfjcf9jp1kg1vc4qrxs9vjm1ddhw3x3v87ywmba03xivw"; depends=[affy affyio affyPLM AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; - affypdnn = derive2 { name="affypdnn"; version="1.44.0"; sha256="1av7a8w86wcslbl3q2zbnga8rww3n7dmwdywq4fm86pbmwh1jz9v"; depends=[affy]; }; - agilp = derive2 { name="agilp"; version="3.2.0"; sha256="1xfa6f78410fdggsp9mlj4102i3rzcxp78n37bkprk4sib3dvmgq"; depends=[]; }; - alsace = derive2 { name="alsace"; version="1.6.0"; sha256="1vrwi2rkccgiwgshz5rxyr55dl7awbh1drbhhsrbpjsbzxwmiv4a"; depends=[ALS ptw]; }; - altcdfenvs = derive2 { name="altcdfenvs"; version="2.32.0"; sha256="1sb516qazxvad2vayd7sai1vg6vq9g7vjy4cyx6c0mqw7sl0pagl"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv]; }; - ampliQueso = derive2 { name="ampliQueso"; version="1.8.0"; sha256="0v21y2nd0qwnag0n6h0krr9c0vpv6ig89d0jsi58x3pi5m0mypip"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; - annaffy = derive2 { name="annaffy"; version="1.42.0"; sha256="1fygm19y0ixh5ir7pldx26xck3w9pz1r26ddkj6ffnp4bljd35lk"; depends=[AnnotationDbi Biobase GO_db KEGG_db]; }; - annmap = derive2 { name="annmap"; version="1.12.0"; sha256="12ixjb9bg49wdzjl0dpxl7lv7yj63fzsjgw2pqjwcimvgamk0vdw"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.48.0"; sha256="1b9fm7b5j2vknf5bm1dj17g6wb3smzq8s02dhx4mlqnpif1av6dk"; depends=[AnnotationDbi Biobase BiocGenerics DBI XML xtable]; }; - annotationTools = derive2 { name="annotationTools"; version="1.44.0"; sha256="0qqkvibnz9j8p0007zahcc07y2avgcrbsxpj5hsdn4q4qs4igjxa"; depends=[Biobase]; }; - anota = derive2 { name="anota"; version="1.18.0"; sha256="0nqshv23gz2q8mqmakw0blbrynbxp2s09i120yhci4qrvay5in7w"; depends=[multtest qvalue]; }; - antiProfiles = derive2 { name="antiProfiles"; version="1.10.0"; sha256="0a707qd525265am6sc8l1k9161cjm8vblkgyzmvgy14zdw4pk479"; depends=[locfit matrixStats]; }; - apComplex = derive2 { name="apComplex"; version="2.36.0"; sha256="0y84hiyzc5i7l2k1nfjfkq5gfll8nli1bqci5jl13207zhhc8jnq"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - aroma_light = derive2 { name="aroma.light"; version="3.0.0"; sha256="1mdncg64h9d7ppg626q42xyimz1s6arj5774hxhc06hq2isb5isi"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; - arrayMvout = derive2 { name="arrayMvout"; version="1.28.0"; sha256="09jvfpzc1hz07rbsgkxcwiib6ihipq75k9w95bv4fdgd9i3jz4yb"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; - arrayQuality = derive2 { name="arrayQuality"; version="1.48.0"; sha256="0cqmbf47rxa2d3is999abwk7j4kakwlb7fhxv0qw8x2j2r33vsrl"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.26.1"; sha256="0wqxlpppysl9kwmbppnvl78rr7f8z9787yfmr02grqrly3ag83fl"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; - attract = derive2 { name="attract"; version="1.22.0"; sha256="09nizaqjnsqkxkyiyp0amyc04z2yf23gp3wqf4y1jy5x9y1kkyqz"; depends=[AnnotationDbi Biobase cluster GOstats KEGG_db limma]; }; - ballgown = derive2 { name="ballgown"; version="2.2.0"; sha256="12j7y2ldnbawqyfxaybb1a9ndylvw09n0d3p001wd1inqnml4xns"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bamsignals = derive2 { name="bamsignals"; version="1.2.0"; sha256="11yix7rzk54zy1mh49d96kvz6ka8rlb66whb6mdkd5lyx32w8lwf"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - baySeq = derive2 { name="baySeq"; version="2.4.1"; sha256="0q3gfdg9l1ipz67bcjaly6fl4pfgwd95cy2hpk4sck59lknh1jm4"; depends=[abind GenomicRanges perm]; }; - beadarray = derive2 { name="beadarray"; version="2.20.1"; sha256="1kgabdnq20i5p0yyim0m2vcp3lkn39fzlghahj9nrvrl9i4n3gyn"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; - beadarraySNP = derive2 { name="beadarraySNP"; version="1.36.0"; sha256="1dj5zi9lkyq5lgrcmr08cjdv3ysfa6p9zc8jza8mm6vy14qsl5ah"; depends=[Biobase quantsmooth]; }; - betr = derive2 { name="betr"; version="1.26.0"; sha256="1rs2xajrac3a4sk88i7zq3v849969iw0k8wmpbc0ihw9m4ljb0sx"; depends=[Biobase limma mvtnorm]; }; - bgafun = derive2 { name="bgafun"; version="1.32.0"; sha256="1wakjjdcgzl9snsa9i1f7kk0ppwiccxmznd93yawvjk74gqwnkp3"; depends=[ade4 made4 seqinr]; }; - bgx = derive2 { name="bgx"; version="1.36.0"; sha256="1x0i4llp6yrfybp7lwqwc7kb1s12dl8a0nwymhjd3fkfv5lslfbx"; depends=[affy Biobase gcrma]; }; - bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.14.2"; sha256="05ksk3phvh4wc3vgfj5bl1jfxhndia90bkq9s91wfjzcfkrd41q8"; depends=[bigmemory Biobase]; }; - bioDist = derive2 { name="bioDist"; version="1.42.0"; sha256="0l5f8yj76sdx7c2zf50h395a4hbqnycnzx5iw3by4rh45xs6pcxj"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.8.25"; sha256="0fnqdkzpyk6zr5s2yb2sr5gp4vaga0qrdxcffcri39wvzpfny4h0"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.2.0"; sha256="15v4s9cdvl4n5sx0n2sskhmq9xvs2cdrxxd7y4l59jgg421fzg7i"; depends=[Biobase broom dplyr tidyr]; }; - biocGraph = derive2 { name="biocGraph"; version="1.32.0"; sha256="0sdnysj0dds74a7jb9qrpkix34d8ray5sp4v6c0kwzcqvax47a1s"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.38.1"; sha256="1ydgxnzkmdfydj6x1pi46qaf8l0nlvw9ycx91zwylwbpz37mss49"; depends=[Biobase graph knitr RBGL RCurl RUnit XML]; }; - biomaRt = derive2 { name="biomaRt"; version="2.26.1"; sha256="1s709055abj2gd35g6nnk5d2ai5ii09iir270l2xika6pi62gj3f"; depends=[AnnotationDbi RCurl XML]; }; - biomvRCNS = derive2 { name="biomvRCNS"; version="1.10.0"; sha256="1vma189z83hvq90g6vaaw87znpk7srl2s1vikicah40s72awywm6"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; - biosvd = derive2 { name="biosvd"; version="2.6.0"; sha256="0mjkan7drib9v49dk3rnrkydm1dxfqimk5gk4jm9qv8kdfcjk0zh"; depends=[Biobase BiocGenerics NMF]; }; - biovizBase = derive2 { name="biovizBase"; version="1.18.0"; sha256="1lp89grxfgkhc9h5jmqs2nr9gr8321nyzwimrszls9dcc787xf00"; depends=[AnnotationDbi BiocGenerics Biostrings dichromat GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - birta = derive2 { name="birta"; version="1.14.0"; sha256="1pszpvmvjp1r0bwj7w9ws0y8xmb3yfmq5gifj9jwvgw2p7y718zr"; depends=[Biobase limma MASS]; }; - birte = derive2 { name="birte"; version="1.6.1"; sha256="08jkjlkjswz3x4sxw80xr9ck6277ag1gzv5y1dxh7aa6i644w48p"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; - blima = derive2 { name="blima"; version="1.4.0"; sha256="1mv153f42x0pjva03gw8b064qmf2558p82xqzvxqycyn7ry3riyz"; depends=[beadarray Biobase BiocGenerics]; }; - bridge = derive2 { name="bridge"; version="1.34.0"; sha256="08lfbczaj7hkgqfsm060z56anx1yvsfwknzw40gq919k0zm9vfcf"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.6.0"; sha256="1bz3b79iiqz251nq54lybxd9bfyzm44p1dbb3nxmjdnf2n1gxs5w"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges gtools IRanges locfit matrixStats R_utils S4Vectors scales SummarizedExperiment]; }; - bumphunter = derive2 { name="bumphunter"; version="1.10.0"; sha256="086rin3gzzxf0lin5fymmsws1k7jhsy4psrkrcpajq09b2qy2s6b"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; - caOmicsV = derive2 { name="caOmicsV"; version="1.0.0"; sha256="0162h17szpr98g4lgz5nypcrslk4103hdn5qdxfxv6frssn9l9g3"; depends=[bc3net igraph]; }; - canceR = derive2 { name="canceR"; version="1.2.0"; sha256="1a9vd2mvz22ajgcxw0k57965gnx91lf7ki6cdc5gsqcfib7xj9n5"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; - cancerclass = derive2 { name="cancerclass"; version="1.14.0"; sha256="0sgiy31h24wlz2q54ssygbdvikzlp8sqf4knkfxc7178a2aq41p4"; depends=[binom Biobase]; }; - casper = derive2 { name="casper"; version="2.4.0"; sha256="19wx4h2pgvi3kdcr28spagjg9qy4g2n5pspv8jn7s9crydihq1v9"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.14.0"; sha256="12gqbmkh5rpbp2nqn8j1mhss3v67jiphqxw0cfgb97y6hh7bcfg6"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCytoscape]; }; - ccrepe = derive2 { name="ccrepe"; version="1.6.0"; sha256="1h96ga660yp1bd20f5ykywybhiwzxrll2p0shkk7wqbn1x7rz1wj"; depends=[infotheo]; }; - cellGrowth = derive2 { name="cellGrowth"; version="1.14.0"; sha256="0d40kll2rkzijyk0d0xb9rzyck5r0hkybv0j1ba72g9kk2mdmz7z"; depends=[lattice locfit]; }; - cellHTS = derive2 { name="cellHTS"; version="1.40.1"; sha256="1pfvndkcmnq1jawijl7yd46jj92d6xlzhv717sd03a6skk11hwwi"; depends=[Biobase genefilter prada RColorBrewer]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.34.1"; sha256="068lqpxhy04fhpma8cbd79jwg0cifvg8qhav5a4p22dgmalvajw1"; depends=[Biobase Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; - cghMCR = derive2 { name="cghMCR"; version="1.28.0"; sha256="02a5a2aj35n3y34gv1j6mk3ahm27i10ahj1msbzp62w8ph9lnasx"; depends=[BiocGenerics CNTools DNAcopy limma]; }; - charm = derive2 { name="charm"; version="2.16.0"; sha256="14nlmii9rqgl6y0fk0gxk11dnjr33mavchp0iban0cr0hn44inm0"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; - chimera = derive2 { name="chimera"; version="1.12.0"; sha256="11arbg6c76rx4zyylp6ga8ygx8890h0pkg4ciwhy4xc8x1smmq7r"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chipenrich = derive2 { name="chipenrich"; version="1.8.0"; sha256="0xzh3nrw62ars7xnnj9qkdsg9yaq1q3xx63l1bi91lxbfih7k9wr"; depends=[chipenrich_data GenomicRanges IRanges lattice latticeExtra mgcv plyr rms stringr]; }; - chipseq = derive2 { name="chipseq"; version="1.20.0"; sha256="1j3kh5alahrqfp0sxkz9b9v8fm8p5gm3nyw1nbcj20ajiapi1gnp"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; - chopsticks = derive2 { name="chopsticks"; version="1.34.0"; sha256="112d4r6ns916yjxzaakghwvbin4cadijpxanm6qs08lyap5imz4s"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="1.14.0"; sha256="0i0hrf38sjsay6r6zh69cy6xki17cjw427szq4h7770jlphiq8n1"; depends=[Biobase changepoint cluster DPpackage ICSNP IRanges MASS]; }; - chromDraw = derive2 { name="chromDraw"; version="1.2.0"; sha256="04zcx2y8x4s3rmfljxgm4h7p7gjrhfgqfhyx6h9f96l734l4f8hs"; depends=[GenomicRanges Rcpp]; }; - cisPath = derive2 { name="cisPath"; version="1.10.0"; sha256="0wqbmqpm6qbrwfnl0s4dn569s74x8g9501ckx0h2g38w961z36k3"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.8.0"; sha256="1ck58mxnx4q1y8wdi8mbp8ijbg30zmfbhp5ldp09zq2m0j746183"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; - cleaver = derive2 { name="cleaver"; version="1.8.0"; sha256="057nvg1cf0prbwarqwv53r651pc1i5sjj6x9nlnshxrgjrwa47ff"; depends=[Biostrings IRanges S4Vectors]; }; - clippda = derive2 { name="clippda"; version="1.20.0"; sha256="1d76air1vf29b9bmycak9fx5silkx9d8k6cpding6pw50d63wcb1"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; - clipper = derive2 { name="clipper"; version="1.10.0"; sha256="1dyaazkwrrh6s3f2a0yj3i92jg16azf92az9lsjy3dbrwi8zhi7l"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; - clonotypeR = derive2 { name="clonotypeR"; version="1.8.0"; sha256="1fj00hrxijkn002ixa7kn07jq94mlsgz99xr3sapzg0jqacgp9q0"; depends=[]; }; - clst = derive2 { name="clst"; version="1.18.0"; sha256="0zg3cdd8j46lm750q0ckin42pmvj0hddl1j2j4lh7x50gvqwyjyz"; depends=[lattice ROC]; }; - clstutils = derive2 { name="clstutils"; version="1.18.0"; sha256="169pzadyhszaxc8r7z1qysmcsijp2x5pw9bizbkkw7i92r8gf4n7"; depends=[ape clst lattice rjson RSQLite]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="2.4.3"; sha256="0fhi1dm8xifz5wzg756y12980a46cqk3mn32i7rg60f0iy2ax0s0"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim KEGGREST magrittr plyr qvalue topGO]; }; - clusterStab = derive2 { name="clusterStab"; version="1.42.0"; sha256="162kq03vs5d3rnmh9kh5djal6vgyr3pzmihjgq50dp04b89ha2d8"; depends=[Biobase]; }; - cn_farms = derive2 { name="cn.farms"; version="1.18.0"; sha256="0d4xwdzccs5wk52ifqryj3cp60vf4yga6ddhs97p0znafh4gfsjv"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; - cn_mops = derive2 { name="cn.mops"; version="1.16.2"; sha256="0c325s454rjiiyydf82vg72a7rfkj36s1dxbib42qvp1pc35rmj3"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools]; }; - cnvGSA = derive2 { name="cnvGSA"; version="1.14.0"; sha256="1kw5161fnlc7b1b03a4kpqz4hlrknyj8dlm8wffjj1d45g1rpvwd"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; - coGPS = derive2 { name="coGPS"; version="1.14.0"; sha256="1bylnhcvbrimjld5nar42kr577lzw97d2f4bibrbqysp332wi1iz"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.2.0"; sha256="0nsz6ci6kcnanm465420sicbp84w2rg58j1550jhnrn4cx4pxm4j"; depends=[biomaRt colortools GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; }; - coRNAi = derive2 { name="coRNAi"; version="1.20.0"; sha256="05jv85jbb5lz0x0cmg52sn6gnsscyq939yyk6ll9061bx51as7cv"; depends=[cellHTS2 gplots lattice limma locfit MASS]; }; - cobindR = derive2 { name="cobindR"; version="1.8.0"; sha256="06nckxm5hz6c336p5fvfmccfzdri68qcmagkyjg7nnfsyl66fri1"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; - codelink = derive2 { name="codelink"; version="1.38.0"; sha256="11rs0nr0nqfmy0v4yfzd7wgq9g0rqzr7r7jcr16z79lc6f5lqm9z"; depends=[annotate Biobase BiocGenerics limma]; }; - cogena = derive2 { name="cogena"; version="1.4.0"; sha256="16imyy9y4jd71pnaf41isrmw711kp4ky61bljn8kmlm9kqf2lbm0"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; - compEpiTools = derive2 { name="compEpiTools"; version="1.4.0"; sha256="0pygd78pi7h050fra41kvwcx5id9ivisdlnaqdxwk1xd07xb67ck"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; - compcodeR = derive2 { name="compcodeR"; version="1.6.0"; sha256="1f84n01c83p5x72ws7a7cam0g0l7n2wjy5pyf06hbwgc0ziz57cs"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - conumee = derive2 { name="conumee"; version="1.2.0"; sha256="1410a8sby4azkj14wqxrsi5i4kiyhgnpidj70ysygk5y2mlghs4x"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges minfi rtracklayer]; }; - convert = derive2 { name="convert"; version="1.46.0"; sha256="04zg65yylg3rifn49k015nf38v3ga0kwq4m9hykb8lfqiw63sxgq"; depends=[Biobase limma marray]; }; - copa = derive2 { name="copa"; version="1.38.0"; sha256="0dmrmf60q83srilzxgwcknnd4wsx4xdlf6plfgz3wks6nyfwy256"; depends=[Biobase]; }; - copynumber = derive2 { name="copynumber"; version="1.10.0"; sha256="1g03cy5inbhzhl5hj8vma34xm8lixilhalavjysp93bwg4dfskv6"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - cosmiq = derive2 { name="cosmiq"; version="1.4.0"; sha256="079423bhmjk5c0x4xq8kxqbcvj8mvh30gy31zr5xn7m9lysmzglc"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; - cpvSNP = derive2 { name="cpvSNP"; version="1.2.0"; sha256="1wnbl6wgflfhjkrv8l5i182mpfxk440rzacpsij0xq0f823nxxgf"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; - cqn = derive2 { name="cqn"; version="1.16.0"; sha256="0cmi8nfk5yh4mma43kay8pglysd26kq17kxa98yirwgdj8cgq5rj"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crlmm = derive2 { name="crlmm"; version="1.28.2"; sha256="1acfd5w2h6z5ksclp7grb42p59jyjm2q4cx9pjc32y0cdvndqhy8"; depends=[affyio Biobase BiocGenerics ellipse ff foreach illuminaio lattice matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; - csaw = derive2 { name="csaw"; version="1.4.1"; sha256="1yl4ckh0289k633kj6msl6rj7rdvcd9h8gnscz6p63n4c6mfpy13"; depends=[AnnotationDbi edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges limma Rsamtools S4Vectors SummarizedExperiment]; }; - ctc = derive2 { name="ctc"; version="1.44.0"; sha256="1wlk1skc6vg10gdcdqdwc5mnh5ags7f13sxmjc19gg6n7wfkjrqg"; depends=[amap]; }; - cummeRbund = derive2 { name="cummeRbund"; version="2.12.1"; sha256="02d9g8rzwj47faijk26q6jg7p687gw87knyycxmljr9vn7157d20"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer]; }; - customProDB = derive2 { name="customProDB"; version="1.10.0"; sha256="04iiwfvjavn3zz6fhf24wd3xy0svviqqklg64hnwza2m4w50awag"; depends=[AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer stringr VariantAnnotation]; }; - cycle = derive2 { name="cycle"; version="1.24.0"; sha256="14xzwlwkb93bhqwwy36bsqimabpmg5an6n6y8xkh5zsxw2c7m1qi"; depends=[Biobase Mfuzz]; }; - cytofkit = derive2 { name="cytofkit"; version="1.2.2"; sha256="1sg6phm9lxw341rangllkiq81bz4073y6zg0d5qz0gyxywv2ycfs"; depends=[Biobase doParallel e1071 flowCore ggplot2 gplots igraph pdist plyr RANN Rcpp reshape reshape2 Rtsne shiny vegan VGAM]; }; - daMA = derive2 { name="daMA"; version="1.42.0"; sha256="1qggz9hrgm2xb2dz9k9gqwygj1ywy0qwzv7lqpn58pz590mz1xds"; depends=[MASS]; }; - dagLogo = derive2 { name="dagLogo"; version="1.8.0"; sha256="0knsvldhdmprqjdxcdi9ccva4fi8vx86mc257nbmj21ac72bynx3"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; - ddCt = derive2 { name="ddCt"; version="1.26.0"; sha256="1rqh6sgw7qlyrpyxgmg6xl7df2jicxzxzq6xnp7l40w6vnjc595a"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddgraph = derive2 { name="ddgraph"; version="1.14.0"; sha256="0nmrz9cy7l31vym3fcc9m3dmgmbnd5r91p3fxpziaarphi27zszl"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; }; - deepSNV = derive2 { name="deepSNV"; version="1.16.0"; sha256="1vzcyqvjzzjlm3np3yyazdvj7jdiwc2wnxghaz8rnxyzm42bmjha"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.10.1"; sha256="0dakvg2m99wm7zg84w3pzvpwi7sjdarib8bl14wyv2bh9lxq93s3"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - derfinder = derive2 { name="derfinder"; version="1.4.4"; sha256="0pjsah2rgxy4584p815zwacspjwx42wv5q1h9v1rywmsbhhfmrdr"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.4.1"; sha256="1mbhr766vl8skcs74xdfx5p7812x5xbv9pgn9nl2s1d9ifcs8zf8"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.4.1"; sha256="16zsq13v86h5zfngh8621ayw5dvb14r486dzak6lz59pqzmviw8g"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 scales]; }; - destiny = derive2 { name="destiny"; version="1.0.0"; sha256="1k8nf9gws6d60fp7mh43hjiaza7zxxfkpjzmi5qj2davjqbx1wn0"; depends=[Biobase BiocGenerics FNN igraph Matrix proxy Rcpp RcppEigen scatterplot3d VIM]; }; - dexus = derive2 { name="dexus"; version="1.10.0"; sha256="0hc28mkmnr37fmw6xw2cywla946gm0cxa8k4hi32d12cm9c24xqx"; depends=[BiocGenerics]; }; - diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.52.0"; sha256="1w44iihckyjw8hpzwr0dsc558c3vzdiw2nbwysmqn0dn4w18xkj2"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.2.2"; sha256="1qa21hqsmxi2f168z6r0qlv2453ljdnldc90c789dwi3067ysjnj"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges IRanges limma locfit rhdf5 Rsamtools S4Vectors]; }; - diggit = derive2 { name="diggit"; version="1.2.0"; sha256="1c83jhih9sg39n7sf83ddsxwjjcqklh0ssb9a4jfyvfahsqcghcb"; depends=[Biobase ks viper]; }; - dks = derive2 { name="dks"; version="1.16.0"; sha256="1l98ya4f8mnzvpj1igzbn6s9yvmv3i31ll5l7hbipk4g7n1lyqal"; depends=[cubature]; }; - domainsignatures = derive2 { name="domainsignatures"; version="1.30.0"; sha256="0rr5d57cjkp46qp2908vh3wyfdgiyaikdgbcxipizcv5a00nq0rx"; depends=[AnnotationDbi biomaRt KEGG_db prada]; }; - dualKS = derive2 { name="dualKS"; version="1.30.0"; sha256="02j9l73brxa4fgsp9cbd3w7dxllvj744rby21dkfnw2c42rcxpvz"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.0.0"; sha256="1fk58zdrw8nwjq1cq7k3rb6nx5fxhkj1p6b6mv32ha8bxwdl3dj0"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.28.0"; sha256="0vahrl947rf0wlz38v7jippdlvd5yhr02y554hs1ilcdz1czmyvn"; depends=[Biobase marray]; }; - easyRNASeq = derive2 { name="easyRNASeq"; version="2.6.3"; sha256="1r6q3f8zril2l0a6l18yw0is85nh4xn759mv8mxc2cmh0d4f60d5"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; - ecolitk = derive2 { name="ecolitk"; version="1.42.0"; sha256="0hcigc60k11s3ha0jwxlvw9zf66x8090yq5m72q6nzzjzr9rvv1r"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.2.1"; sha256="1hmk7ncjgb0lwm7964b6c7c425jw3d8cd3zcvrv1k5359wxzfwmc"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.12.0"; sha256="1n3fmrms48z7bh1sz64j242f08jg32dp0l25kba60abgypg2f2fw"; depends=[limma]; }; - eiR = derive2 { name="eiR"; version="1.10.1"; sha256="0770rawqw6ys1594f8xpnjjh0p7fav5qmbbq64byzv4hb5ldl7p0"; depends=[BH BiocGenerics ChemmineR DBI digest RCurl RUnit snow snowfall]; }; - eisa = derive2 { name="eisa"; version="1.22.0"; sha256="0p3s6z7s4d165h4w5g1h273626h5j255c0hyjv5dlrdhr4ign7v6"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.10.2"; sha256="0yhpqpjdr5z9m8khiyl8qh0sh6mqwalv6441qfmyq5wivv1nx2is"; depends=[BiocGenerics Biostrings GenomicRanges VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="1.2.2"; sha256="08mj3ccskslwqbnk0yz7s5rdh9vvp2adi7hqbz76w7zbvflfsm1v"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; }; - epigenomix = derive2 { name="epigenomix"; version="1.10.0"; sha256="03nv36zldpjwbwassn5ca26ibdy7cd148ywp7wd6igqjg2lcgich"; depends=[beadarray Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - epivizr = derive2 { name="epivizr"; version="1.8.1"; sha256="1zgxmck5rry5h6jyi5kvbf4sf8902q21b172r25i1mzyiygqwpvn"; depends=[Biobase GenomeInfoDb GenomicFeatures GenomicRanges httpuv mime OrganismDbi R6 rjson rtracklayer S4Vectors SummarizedExperiment]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.4.0"; sha256="1fj9wbm5sgshpnq855bq6cf13b9141p6r8gq2053k8p1gvb9gbxi"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr QuasiSeq qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="0.2.0"; sha256="1pw5n5m0nis8crzpwd4wbfk7vija5r6r2g6jshc07vd2nya5fxsk"; depends=[Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny]; }; - eudysbiome = derive2 { name="eudysbiome"; version="1.0.0"; sha256="10id5pcs29xsicr9ffpd8rd2fqvj776wgdbn80vvym87gyn3kxxh"; depends=[plyr]; }; - exomeCopy = derive2 { name="exomeCopy"; version="1.16.0"; sha256="09awyyfgs0k639nqrcrbq1k875qlyac1146w4ay6nxgijqy7iv82"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - exomePeak = derive2 { name="exomePeak"; version="2.2.2"; sha256="03xj0h1cgxzbp2fk830l771jmmcll1bq81xips8hjgng3ywz5m1a"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; - explorase = derive2 { name="explorase"; version="1.34.0"; sha256="108p864qq8zh4x7p765ygrdkj4r0vm3s2fmi3scswkhcv3vjcjg3"; depends=[limma rggobi RGtk2]; }; - fCI = derive2 { name="fCI"; version="1.0.0"; sha256="17d592qmyia0j91sx8qlsv5xi3d4akd41rdqz0gsvnsbc5c494qn"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; - fabia = derive2 { name="fabia"; version="2.16.0"; sha256="0fm7bkqydks0qqfiifbkf5i7z8jb9l8bpbwkfy0kw4wfnzn4j7n8"; depends=[Biobase]; }; - facopy = derive2 { name="facopy"; version="1.4.1"; sha256="07ggz86c48rz8asqvfglrvsimnzh3ii43kzpm8ji6sd43i141650"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz scales]; }; - factDesign = derive2 { name="factDesign"; version="1.46.0"; sha256="0i9aqf0asg0jzvb0ngdyfydgxgwwbxkhmzgc20r8ybjc3rgw0xk6"; depends=[Biobase]; }; - farms = derive2 { name="farms"; version="1.22.0"; sha256="1jmx5rajm6fkhx5gfpwh8nsqw0plhfzy1bibvkdf83arxjjr6s59"; depends=[affy Biobase MASS]; }; - fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.6.1"; sha256="188jq7g1qy5m05aqsyq51cq56zwf6k3awk3285kx4w3328gr6s2m"; depends=[Hmisc LiquidAssociation WGCNA]; }; - fastseg = derive2 { name="fastseg"; version="1.16.0"; sha256="0js8vf2s8vya0iwd8158agbhzppgicvsnvm5lhyhhg5zs49b71hb"; depends=[Biobase BiocGenerics GenomicRanges IRanges]; }; - fdrame = derive2 { name="fdrame"; version="1.42.0"; sha256="1kqhryvy4wb0c3dj76crlxvgr0h41znh8kn624n51ipfp34n5fgi"; depends=[]; }; - ffpe = derive2 { name="ffpe"; version="1.14.0"; sha256="0vdssf9ljk3x7zhx5x5af5wqhynkaz8pb6sr8zp6ihqfiw498r0q"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; - flagme = derive2 { name="flagme"; version="1.26.0"; sha256="1h9aa6s1r2g6sr81aslqq6jydyn98j9bbcy5q7dp9zf4agfd2n8h"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; - flipflop = derive2 { name="flipflop"; version="1.8.0"; sha256="1blqi39kmyy2zq6lb42nk30dcc0ivgqf8hifvil2j4iv650i5476"; depends=[GenomicRanges IRanges Matrix]; }; - flowBeads = derive2 { name="flowBeads"; version="1.8.0"; sha256="0nshbwv0wma33di9q1cih4kvfsfwvzwj0nd6qymq6zvxijl57231"; depends=[Biobase flowCore knitr rrcov xtable]; }; - flowBin = derive2 { name="flowBin"; version="1.6.0"; sha256="0icz00h87gmwl04kbbjkrsr2k6d8migkcgcld8hag23bspdfphrl"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; - flowCHIC = derive2 { name="flowCHIC"; version="1.4.0"; sha256="0j7kvlc6l6cigz88r4jxws04xs628j272crvihh4fgklp83jqyr7"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.8.0"; sha256="064946w944gw7l0hizw974i21cahzvfj1xza8f7ay9rx2baz28sh"; depends=[Rgraphviz SPARQL]; }; - flowClean = derive2 { name="flowClean"; version="1.6.0"; sha256="0ck0fqbx7zrj56nn4c30qgbn5rncqch8kcc6dra6nxib9p9hy0db"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.8.0"; sha256="1w2a9ls1cyvfwx8b7vcmxxzyj1crdpyifqld99lcwcnz5g6cw9cj"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; }; - flowCore = derive2 { name="flowCore"; version="1.36.9"; sha256="0fzjc76p6d7w4rl57qc7vqc6bn9f6xy8dvdgrdh6hksqxrdxgl3a"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; }; - flowCyBar = derive2 { name="flowCyBar"; version="1.6.0"; sha256="0j9hdcgkh1glfyxa9wcwpdxrkn3vgfns7w15xp341m2c4lf7rq7s"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.4.0"; sha256="1gr9rd3brxqpg3dzgsrvrz104lvzcs8kf50zbx2nh22viyv1kmfp"; depends=[car flowCore GEOmap gplots RFOC]; }; - flowFP = derive2 { name="flowFP"; version="1.28.0"; sha256="0sa17dnn2x1wq4mk719nbfpabjslyv8aafc8i0g09dlb9zm303q7"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowFit = derive2 { name="flowFit"; version="1.8.0"; sha256="1fja1d5irh71a3rqdsbw5sb14ss2xmird6vxcps96r6s6rz2bra3"; depends=[flowCore flowViz gplots kza minpack_lm]; }; - flowMap = derive2 { name="flowMap"; version="1.8.0"; sha256="0rkdspl9lnasc8axlsx076g14pkgwrlz9nbxy0f1z67w991d823p"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.6.0"; sha256="121a6khppgrdim1g5yi67s74npgvg73qb741x9gry5zz4q0z70fq"; depends=[Biobase flowCore Rcpp]; }; - flowMeans = derive2 { name="flowMeans"; version="1.30.0"; sha256="08dvpfvpqp99lm1lj5fryqqmskgqpx58m62n96ff319wzxmf1ass"; depends=[Biobase feature flowCore rrcov]; }; - flowMerge = derive2 { name="flowMerge"; version="2.18.0"; sha256="109rx6pyyvc451rl31lb6qxajmsml2jsp81dd2d3shv1zdc3jj2c"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.12.0"; sha256="1wm24xdzlbrr1j676h5padc87b9qz8x54zp2lkfag4g6iqbgflyg"; depends=[]; }; - flowPlots = derive2 { name="flowPlots"; version="1.18.0"; sha256="14mnkzyszmzl4wdc8g2b9m53h5k2b7mcm23xqldnxx88w4jqc66q"; depends=[]; }; - flowQ = derive2 { name="flowQ"; version="1.30.0"; sha256="1yz0w0bpv98l319y8dw82qaykg6w70sxpzmhxdckwdqjpixq5sf5"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; - flowQB = derive2 { name="flowQB"; version="1.14.0"; sha256="1swsdqra8w8z27p2mv1q37ydak7rjifxm78h5x6mhv1vfq4faz12"; depends=[Biobase flowCore MASS]; }; - flowStats = derive2 { name="flowStats"; version="3.28.1"; sha256="1i9x94qk4cq1fkix9r2qn34k74v2i732ldj2s68ynqniyvsj6vdb"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS mvoutlier]; }; - flowTrans = derive2 { name="flowTrans"; version="1.22.0"; sha256="0rqg12avmpr169i3jd1rd1ncpzkplm840nhv9h0gcqirai70pqhc"; depends=[flowClust flowCore flowViz]; }; - flowType = derive2 { name="flowType"; version="2.8.1"; sha256="1ck940f18s89h8iqbkspibykr68473vb93graah3gqn7svw6970g"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; - flowUtils = derive2 { name="flowUtils"; version="1.34.0"; sha256="0qba66cfsy8facvdpnl5jf71xwaqs3w6j2z0ph7c39zyng0nibwp"; depends=[Biobase corpcor flowCore flowViz graph RUnit XML]; }; - flowVS = derive2 { name="flowVS"; version="1.2.0"; sha256="0hls6c9s3h470hzayfd1k9vn5v146cymfp2b20hzjyc6dg20fj2s"; depends=[flowCore flowStats flowViz]; }; - flowViz = derive2 { name="flowViz"; version="1.34.1"; sha256="1ggy8lgkf2j00l8cg4mijg9yydxr4gmfnby0ngiynk94h3i68z94"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="3.16.15"; sha256="1pydk53x2myb97lfyc5wkynbwxb23p519m0krcq3g77n2baa9567"; depends=[BH Biobase BiocGenerics data_table dplyr flowCore flowUtils flowViz graph gridExtra jsonlite lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz stringr XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.4.0"; sha256="0rd9sg3d17ihrm4zz4jpvv3n4xcz4djcfnsvx6qzkri2vjmk7spj"; depends=[abind BiocParallel colorRamps EBImage rgl]; }; - fmcsR = derive2 { name="fmcsR"; version="1.12.2"; sha256="1mv6ds20m9b0b2326cxy486kri2fa40lm23ck2sx1vf6lsnfh6g6"; depends=[BiocGenerics ChemmineR RUnit]; }; - focalCall = derive2 { name="focalCall"; version="1.4.0"; sha256="1dqk0lda24lkhfsid15c6n121s63zbk6658za5qxqkxdd82z7axf"; depends=[CGHcall]; }; - frma = derive2 { name="frma"; version="1.22.0"; sha256="0j4zxxmmgd9jq9g7if7y0i7fkiynfikkll05p14h2jrmn2ywimdm"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; - frmaTools = derive2 { name="frmaTools"; version="1.22.0"; sha256="1lxjr8yzi2hna5yygyaqxr5fqxfis4k3aczljlpm86mp8r6f80qa"; depends=[affy Biobase DBI preprocessCore]; }; - gCMAP = derive2 { name="gCMAP"; version="1.14.0"; sha256="09dcaq0763kb399wh232n6r1s8qkj0c4zcmpjp6cz08w6n7lchgx"; depends=[annotate AnnotationDbi Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; - gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.10.0"; sha256="00qx90gycqqca8b3brkl0bkckn7saqz9z38vinhjxlyaanc9v6ml"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; - gQTLBase = derive2 { name="gQTLBase"; version="1.2.1"; sha256="1a1ndjjp2zn1lsfahpvi3xhkdgwl5wk0bdm7kc92aidq50a2db42"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors]; }; - gQTLstats = derive2 { name="gQTLstats"; version="1.2.0"; sha256="1cwri36z85zyyr48dkkl7qkgbx9fpv7y38mbbm470adc7ac56zbv"; depends=[AnnotationDbi BatchJobs Biobase BiocGenerics doParallel dplyr ffbase foreach gam GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gQTLBase IRanges limma reshape2 S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; - gaga = derive2 { name="gaga"; version="2.16.0"; sha256="198521xnznvwg8k5l6pak3jcyp9ml3hbzjk10vdj926izslnfavw"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.20.1"; sha256="08lq8j07c855v54xia97ykkd81307xyh30lbcwv7by5grnkrxqbp"; depends=[AnnotationDbi graph KEGGREST]; }; - gaggle = derive2 { name="gaggle"; version="1.38.0"; sha256="0bl60nca27rkij061h6g16ddlkq29rb1wh5pr2hz87y74pmb8m2w"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.14.0"; sha256="099imzsa7pghp7qbxjjnfrqc8zkn25wm5xj9jn40m9as11zxdrsx"; depends=[]; }; - gaucho = derive2 { name="gaucho"; version="1.6.0"; sha256="1c1aaidhdv9rr2v3q6832q0ajc3g7l4gfx1rhf27kv4pn1j5s23s"; depends=[GA graph heatmap_plus png Rgraphviz]; }; - gcatest = derive2 { name="gcatest"; version="1.0.0"; sha256="1kjz7msk59y4vdhm9wi25yia5d4glgpdrd7ykl3fb5sz83vggmw1"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.42.0"; sha256="1bzrr6q9m8i6316iamx10fk9y06yv628m8prsn5fhggjawyzp6di"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.6.2"; sha256="104r6wl5vwncq38gd93sjzwkqlxqkr60qq300rmwk14p288fr9kh"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.10.0"; sha256="183aa5mzdm97rxzpcy0m93ywm7p5xvv38lsly6mb6y0afc3slfb4"; depends=[Biobase e1071 EBarrays minet]; }; - geecc = derive2 { name="geecc"; version="1.4.0"; sha256="00dkp4ldnpadvw6fdva0gg0m843j7i667r0i33c9dsrjfc7k7z8q"; depends=[gplots hypergea MASS]; }; - genArise = derive2 { name="genArise"; version="1.46.0"; sha256="1a85r7lbbz090k2kiza97b18vh4gn01wqp7qs8a8skxina6qsig6"; depends=[locfit tkrplot xtable]; }; - geneRecommender = derive2 { name="geneRecommender"; version="1.42.0"; sha256="0823w9haab5wc06rk9853l07vgwpzxpivh84y3av6mhfn36lz0id"; depends=[Biobase]; }; - geneRxCluster = derive2 { name="geneRxCluster"; version="1.6.0"; sha256="1blkzf503bfdfvbagbk41167qkd05mdxd96lav5fz1ry780i8lb7"; depends=[GenomicRanges IRanges]; }; - genefilter = derive2 { name="genefilter"; version="1.52.1"; sha256="1pl1vbxfajms26734iprqlb4w1ly2w5101z8d895znc4lfbp6mvs"; depends=[annotate AnnotationDbi Biobase survival]; }; - genefu = derive2 { name="genefu"; version="2.2.0"; sha256="0q49hnxz59hack7j28haazia6qd5pkmgyq5jaypvaa3jnvcsfij7"; depends=[AIMS amap biomaRt iC10 mclust survcomp]; }; - geneplotter = derive2 { name="geneplotter"; version="1.48.0"; sha256="13ivmp486m1ka0ww3kdg5k5czps9plnrn9p6maq2gdq8dlkgvdly"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; - genoCN = derive2 { name="genoCN"; version="1.22.0"; sha256="0irc6cwlaf71g76vrijw6z499aiw0h8mll0521cc12hs4wq9060z"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.2.2"; sha256="0kvzwc21zsh2c8d34yn935ncn38bfkpzmknycd8h7b0521x20mi9"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr readr reshape2 Rsamtools rtracklayer seqPattern]; }; - genomeIntervals = derive2 { name="genomeIntervals"; version="1.26.0"; sha256="0fnxrxb1lk59608kcpc19yxrz3all346qh7rs668f3kk7hj456gb"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; - genomes = derive2 { name="genomes"; version="2.16.1"; sha256="1wcb1x0srfk36r70xn80fka33942c4jn0qq1rhg375m9bqmrwj84"; depends=[Biostrings GenomicRanges IRanges RCurl XML]; }; - genoset = derive2 { name="genoset"; version="1.24.0"; sha256="0xxh23sdb5qjfh97a2psp70zb54zx40x8501bpp7gzgqbfn1wf7w"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.0.0"; sha256="1clljhqy57yy0ss9700zfnsgnby3dism8z2682xjhzzprg049cx4"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - gespeR = derive2 { name="gespeR"; version="1.2.0"; sha256="0s8lndwwqkkkiyqzi8xpqz6clzjrkmkkrh2f1ch80hvfj83rb89d"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - ggbio = derive2 { name="ggbio"; version="1.18.5"; sha256="0pj0v4frj9dhyyq5mb8vls1dnlv1lvah9csrg9rz33x61px7iplq"; depends=[Biobase BiocGenerics Biostrings biovizBase BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggtree = derive2 { name="ggtree"; version="1.2.17"; sha256="1r0zxwab7pp5zhxgcpir24kzwv2vgw1fm04wqbfy2in3pj2phr64"; depends=[ape Biostrings ggplot2 jsonlite magrittr tidyr]; }; - girafe = derive2 { name="girafe"; version="1.22.0"; sha256="1l7vdfrvr0y0l1lwnsyzkbx8p35rkmxnnclfqqqailhy5q5prjp2"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - globaltest = derive2 { name="globaltest"; version="5.24.0"; sha256="0a1q8r581vq4srpy57ixbcnb87ajiazj5dzyswyjfhs2l9z5zhdq"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.12.0"; sha256="1zzhy2cmqg0npyc6zilsjb8dn48dyva7xb8b7d6czgwb4rvyrsrr"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - goProfiles = derive2 { name="goProfiles"; version="1.32.0"; sha256="0knflwy6yarkp5r3l5q14pkcmbwpivgylfd33a8xwn3w87qk9gxw"; depends=[AnnotationDbi Biobase GO_db]; }; - goTools = derive2 { name="goTools"; version="1.44.0"; sha256="0sq4l1ayh65x7b0spmffxqx68cll8wgbj30cp0ylnyb6s78whr6q"; depends=[AnnotationDbi GO_db]; }; - goseq = derive2 { name="goseq"; version="1.22.0"; sha256="0zfly8fl77s59j6sdgn4c0gfwwsm1q8r57pf4h6zgxnbahll2b10"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; - gpls = derive2 { name="gpls"; version="1.42.0"; sha256="1a8qhyyidx3rnipjr42q2jzgcjljij2g6a22dlk9p350sf426i0f"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.14.0"; sha256="0mc8x8faj8pf8zb3mywjscn2rzs7bc0ws507a32r7zl5j8p9rzag"; depends=[gptk]; }; - graph = derive2 { name="graph"; version="1.48.0"; sha256="16w75rji3kv24gfv44w66y1a2y75ax26rl470y3ypna0ndc3rrcd"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.16.0"; sha256="19dzzmy3jm555iz3wn6m0izn7xpl66q1rfngfcyg3czz266x4kv4"; depends=[AnnotationDbi BiocGenerics graph rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.4.1"; sha256="0ndbdn2jqnyla7malppza9f92x7wybbg0n7lfl1ydwx53mwndpz6"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; - gtrellis = derive2 { name="gtrellis"; version="1.2.0"; sha256="00alv9amhwgcpzy8g2av46r183070nansvswai0m9ppd4rhc53zh"; depends=[circlize GetoptLong]; }; - gwascat = derive2 { name="gwascat"; version="2.2.0"; sha256="06v3rc21riv53qpvaizsbrsi5zdmz1fzjhbjf741wkgbh280g6gl"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.4.1"; sha256="17d5y6hzwjmj9dayrdss0shjqkphv12p70s8g7052q6sljx8iwc2"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; - hapFabia = derive2 { name="hapFabia"; version="1.12.0"; sha256="019fsyc3a2myxapjk2wx978q9jkhsz2889rkvs7vb0aqf8bg0psr"; depends=[Biobase fabia]; }; - hiAnnotator = derive2 { name="hiAnnotator"; version="1.4.0"; sha256="0i4bxzxvqll1n5ardclkfg70hijy3mv4la90g4y6ycl66q0mycrn"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; - hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.6.0"; sha256="1cszyap1cngrfx59mf76826iiwahlhj2l6iv97470nmx5a9rymkh"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator rSFFreader sonicLength xlsx]; }; - hierGWAS = derive2 { name="hierGWAS"; version="1.0.0"; sha256="0hff1vi86mh0nqgld206bp18swzxnrkr5miagnmbr0v7ayh70lxb"; depends=[fastcluster fmsb glmnet]; }; - hopach = derive2 { name="hopach"; version="2.30.0"; sha256="0yggs5f425g5q04lwischjilzl0q8dsnfaf5hk078h0fzpm4j3vs"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.12.0"; sha256="0dmzn44lh6mfdpxfqvz3jp0q8xx9j6y8nqqp9xw3wp2ahf3p30k7"; depends=[]; }; - htSeqTools = derive2 { name="htSeqTools"; version="1.16.0"; sha256="1bjbagx6s66fiia71n7ljg5rfc2v22bbp2sk718mf1i9i38c58lm"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS]; }; - hyperdraw = derive2 { name="hyperdraw"; version="1.22.0"; sha256="1axxdll3mfnslgx6a1b6kfjvimbkgna73qmpvz8aslhihry7c7hi"; depends=[graph hypergraph Rgraphviz]; }; - hypergraph = derive2 { name="hypergraph"; version="1.42.0"; sha256="1z2x22xm7609sjma54i48f5fax0fm56mjmzqk55p5x3jyq53j0jw"; depends=[graph]; }; - iASeq = derive2 { name="iASeq"; version="1.14.0"; sha256="0l3vzbin04sb3z0zzgzbp68clp23cg3pyid9aj3p67z38gy42024"; depends=[]; }; - iBBiG = derive2 { name="iBBiG"; version="1.14.0"; sha256="13z2i2yp7bxn8v8in3nrw3blj2dd4kcf1hjawww1yzl1q8zasxx2"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.10.0"; sha256="1hdzqz19akdsmswspq13n99magn8v4r7zlb684hljnr05jbczrcp"; depends=[Biobase ggplot2]; }; - iCheck = derive2 { name="iCheck"; version="1.0.0"; sha256="1bhnbiwihln9xbl0s4lp70y6qcc1i3hm4n34dndx5frwnm8g1zc2"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d vsn]; }; - iChip = derive2 { name="iChip"; version="1.24.0"; sha256="09vx2sz88gii3d0wi0sf3m1hi7i2737mp2xzawchdh9pr9i7p2qw"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.6.0"; sha256="1a0a6pyv10fy7hhfsar14wrwqzj4dd1qlcvgkc4cs3sbrns2gjw2"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.0.0"; sha256="091bm1qssl8ngiv9cbl6i7mdgi65l1ywk5a78jl01j414h190bra"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.14.0"; sha256="1gzxv6jkn7crylklmnvhm86gczmsr80dmw1a7flaisiiy40k128g"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSeq = derive2 { name="iSeq"; version="1.22.0"; sha256="1bh2s5cc7jsz1gdh0f5f09izm3b2pjmzbhmr0vyp1b9nc12i35v9"; depends=[]; }; - ibh = derive2 { name="ibh"; version="1.18.0"; sha256="0damqv5bn9fyki7ghqflz8bzg42v3wf1gi173adk9hpj9glic73j"; depends=[simpIntLists]; }; - idiogram = derive2 { name="idiogram"; version="1.46.0"; sha256="154hrvq86bm8f51mbgzfzg3gjyzzlnsl3yfmqglk78smj2a152lf"; depends=[annotate Biobase plotrix]; }; - illuminaio = derive2 { name="illuminaio"; version="0.12.0"; sha256="1mjgs1kf4wzb3zvqyq4w81sqrb4nrf6qwdlg6hz471xh6c3b7avb"; depends=[base64]; }; - imageHTS = derive2 { name="imageHTS"; version="1.20.0"; sha256="1dg8cmrnzlv2qm5lf9771fiir5l0cql6pmfmv0l3037wisdgz1jw"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.2.0"; sha256="1hgla6chdpbc3yk8k5i8pzkxr17clirpcihp5gczr9xnqx9k8i2h"; depends=[flowCore lattice]; }; - impute = derive2 { name="impute"; version="1.44.0"; sha256="0y4x5jk7gsf4xn56jrkdcdnxpcfll4h6ivncd7n4snmzixldvmvw"; depends=[]; }; - inSilicoDb = derive2 { name="inSilicoDb"; version="2.6.0"; sha256="1avxm8qm9rblck94v0aq0na70jfl2cyr9xmbbk27n5hgp1cnaizf"; depends=[Biobase RCurl rjson]; }; - inSilicoMerging = derive2 { name="inSilicoMerging"; version="1.14.0"; sha256="1xiq66b0vjrcxf4nbmk5mmn1dlxbpa879z04f00w3yz1k7rx6782"; depends=[Biobase]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.2.2"; sha256="1jb88iwgp80i3ir1509chr7cjrjvk92a2d5hcdyl0vg9b0qxymbj"; depends=[ABAData gplots Rcpp]; }; + ABSSeq = derive2 { name="ABSSeq"; version="1.8.1"; sha256="099z80h097sf0slj3m29nfdmn1a5p3b0c7sgh1wfnm6dg6y7g26k"; depends=[limma locfit]; }; + ABarray = derive2 { name="ABarray"; version="1.40.0"; sha256="1qylnf9x8hihc9g64xpcb6jrphysmlg61aa14jd3afjak3xh52g4"; depends=[Biobase multtest]; }; + ACME = derive2 { name="ACME"; version="2.28.0"; sha256="0l56y211r9i50gksv7bm7jzdpk8b3dmc83vkpd5xfnbigdfn7al4"; depends=[Biobase BiocGenerics]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.12.0"; sha256="0ndgqrg0d02yx9ykgqss9n21dfmldfmgx1hpfj9bmsblyf074gxm"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + AGDEX = derive2 { name="AGDEX"; version="1.20.0"; sha256="0j1n9r8xagb5wrwhs7sdmvzg2vz9nwl9rf3214kq87hgwbkqn64m"; depends=[Biobase GSEABase]; }; + AIMS = derive2 { name="AIMS"; version="1.4.0"; sha256="1sq9gwsmvrq4fdhh5p9wwrikrhgpzw5pv07ncvmirpkhh0qi50l6"; depends=[Biobase e1071]; }; + ALDEx2 = derive2 { name="ALDEx2"; version="1.4.0"; sha256="0vhsfa7asfd8rwvi9z1g0wjsx91dldfhisa6a447wahb7m73cs4y"; depends=[GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.12.0"; sha256="1y79fll7jxw8h80h0zld0ys4an23f0f86phl8r40kbxlk002mpsq"; depends=[ARRmData]; }; + ASEB = derive2 { name="ASEB"; version="1.16.0"; sha256="0g2qsmqmsk1ka4mvf2qkh9pxdi0xm1n7csqhwsfbmlmv3za0zkdy"; depends=[]; }; + ASGSCA = derive2 { name="ASGSCA"; version="1.6.0"; sha256="0y1gq5xii5p5m0x19xmbs00hlc68zgw7nqnpxkk3jf8g995gvsvb"; depends=[MASS Matrix]; }; + ASSET = derive2 { name="ASSET"; version="1.10.0"; sha256="0yb1ps4cwb36zr6f3na3wp6v6l0wi1x1hqck4irzpwmlh7vazkqj"; depends=[MASS msm mvtnorm rmeta tmvnsim]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.8.0"; sha256="18pdw43ibbhqf25z1vcm34gpyxwxm96d28clqp8grq50zr60n9ii"; depends=[gplots msm Rlab]; }; + AffyCompatible = derive2 { name="AffyCompatible"; version="1.32.0"; sha256="15cg6jbmn7fq89cmmfkwykmxqrz8fvq59ip691ai93n18js8hzwf"; depends=[Biostrings RCurl XML]; }; + AffyExpress = derive2 { name="AffyExpress"; version="1.38.0"; sha256="1kq17y9864d94pvpw9hvrrl8s8fh9c7sd6cf4cykzj34729k6xm1"; depends=[affy limma]; }; + AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.18.0"; sha256="1p8j3286ix36sckzrw726q7nsxivcgxggkmp76vmrd6l0a67bz75"; depends=[affy]; }; + AffyTiling = derive2 { name="AffyTiling"; version="1.29.0"; sha256="0s5hrlzzxpyw52lpp7xq7vd5wds5ymph2gav4mhbbplvism7wnjz"; depends=[affxparser affy preprocessCore]; }; + AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.22.0"; sha256="1fkl1rnj9pj654pdjfs2k6r74yvpbm331gf9cdcsq3baafygv48z"; depends=[affy affycoretools Biobase limma preprocessCore]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.10.2"; sha256="09p2z1vh7hq7fkfz49n7c8yfsji66p6dry5dmi6b6gm22fj5q7f2"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.6.2"; sha256="0fws4b2cln0i9fn5cnvggjk86y2mcbzvd1r5gfs8idjsm79mzaxn"; depends=[Biobase graph log4r rjson]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.0.3"; sha256="1a0kaxd65r9453cx8jw5y2zvybqxjlyw68x3vn0kvgz6pv84dwq1"; depends=[AneuFinderData BiocGenerics Biostrings cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 IRanges mclust preseqR ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.34.4"; sha256="1k3gfsjrivc7467vg0h705hh4dvzgdhknz62j7zmfxm67qk9r8rq"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.14.2"; sha256="1vkdd1qdv5g680ipw4vwjvn52xn66xpg6ngmwyknz77ckxnnpf4q"; depends=[AnnotationDbi Biobase BiocGenerics DBI RSQLite S4Vectors XML]; }; + AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.22.0"; sha256="1mc2y5ra8cmbmr10vnywx4hjdklrq3ihwl9m11g2vaqylwy7gh1c"; depends=[AnnotationDbi DBI]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="2.4.2"; sha256="1jjl1q5wgwfjhrm96c7wh0w8dpaxzqy9wjisy3pmg483vg0960y4"; depends=[AnnotationDbi BiocGenerics BiocInstaller httr interactiveDisplayBase RSQLite S4Vectors]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.2.2"; sha256="1h9qljbyjg2qgxx9knwwyfiy0kw7wp2k281hxzq66c24idp3kkrl"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller Biostrings curl DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery httr IRanges jsonlite OrganismDbi rBiopaxParser Rsamtools RSQLite rtracklayer S4Vectors XML xml2]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.32.0"; sha256="08fcvhjmpr1fx90qyik12hc3yb3v6i4bvx62xadxm3m2zq52nmgl"; depends=[Biobase limma oligo XML]; }; + ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.22.1"; sha256="1p5flrkb8xwhw51fjr8zm27qgzm5v10s4kccjajiykiv0v301snh"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; + ArrayTV = derive2 { name="ArrayTV"; version="1.10.0"; sha256="0vh53xlg4yidmk39rxa0nw2cr12f6mld1vwiq6jba5j51szqm0aw"; depends=[DNAcopy foreach oligoClasses S4Vectors]; }; + ArrayTools = derive2 { name="ArrayTools"; version="1.32.0"; sha256="09cqab10xh052d0932p2y3svspn9lqi1zylkm7kglkksn7j27vih"; depends=[affy Biobase limma xtable]; }; + AtlasRDF = derive2 { name="AtlasRDF"; version="1.8.0"; sha256="1hw5i074cxkwqi4gkb3abqvl9q3wz93s5fvym28id63qsmpdssl9"; depends=[hash SPARQL]; }; + BAC = derive2 { name="BAC"; version="1.32.0"; sha256="07f8vcbdqlq4i0b6xqrlf6fr3zj8kbbjssc3pf9gy2s0kf1da6p0"; depends=[]; }; + BADER = derive2 { name="BADER"; version="1.10.0"; sha256="1ibcchi6qgd49m4kjz3dx8nc31nkg5bjw8g5w5ih05pki0gl4219"; depends=[]; }; + BAGS = derive2 { name="BAGS"; version="2.12.0"; sha256="1krnkamjxk71lxmm1n1zg8c2agv4w0xksz3gngpjjgzcybfnnn2i"; depends=[Biobase breastCancerVDX]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.2.0"; sha256="0q8kj2gp0j6xrmgq1zd1230hddiy139qrdrz64m2nab5avn1fmlm"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BCRANK = derive2 { name="BCRANK"; version="1.34.0"; sha256="0y6dj26qd6a3jm7lp0jcdkpvdc4jq3gp11mvv1ix724zasb57k3d"; depends=[Biostrings]; }; + BEAT = derive2 { name="BEAT"; version="1.10.0"; sha256="0v7hl5v84bn2iik89j4wsq9vnnr392n4h2x2n8x9fdips2bjpq3w"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; + BEclear = derive2 { name="BEclear"; version="1.4.0"; sha256="17p4g4gh6vnnymsrhfh1xhjj4ahm0dilapnlh4mf883x9q8acbda"; depends=[Matrix snowfall]; }; + BGmix = derive2 { name="BGmix"; version="1.32.0"; sha256="1z0i0h43din2659yzzjx10bzmbak5nwrbgnab4ifq8hq6sgxyzg2"; depends=[KernSmooth]; }; + BHC = derive2 { name="BHC"; version="1.24.0"; sha256="0v906vnh5ph1srr1s5i4cbplkyqfim6fmxn0wp290jb0ilkp3ziv"; depends=[]; }; + BRAIN = derive2 { name="BRAIN"; version="1.18.0"; sha256="0iwz6yy164hwy1mqa869y6d1qs69ijx566dfff8mj0ym655pd3rz"; depends=[Biostrings lattice PolynomF]; }; + BSgenome = derive2 { name="BSgenome"; version="1.40.1"; sha256="0zmlzlcwairka59is5wmkh6knh6j4d328z9fsw3v91fx6gavjl2n"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; + BUS = derive2 { name="BUS"; version="1.28.0"; sha256="1z8l27rsz6zz8d0sga5pwn77iv5pwjgy3zjm8rcc6w3ql86za5m3"; depends=[infotheo minet]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.0.0"; sha256="1rxncqjv7bw4f17ra00cq1xp9g72mlj1wc335g5ln7778wiax1g9"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.16.0"; sha256="1w1n9m5j9mcphvhsdj7dh8awvj1r10zna7dx13b2f280jmglg215"; depends=[RCurl RJSONIO]; }; + Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.8.0"; sha256="0216xhqj4ysscj4lr66vibijrac7kmkmxnqsqcwwxwzqsrk5gh7z"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; + BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.0.2"; sha256="1ryarcvb9cpmgc3yzd7qck46ff2xc417dhnfiwma3gy3gm2g4lyi"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; + BatchQC = derive2 { name="BatchQC"; version="1.0.22"; sha256="18c675pnah7xc089ny6h8zf4150d9f3ayf5wyxji0zdkvk2gnxjv"; depends=[corpcor d3heatmap ggvis gplots knitr limma matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BayesPeak = derive2 { name="BayesPeak"; version="1.24.0"; sha256="1m8c6akdi4mw1aj6482s9x8918m2a3d58s0fvvhpwzcppz7yjw33"; depends=[IRanges]; }; + BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.24.2"; sha256="04jviwwx4brbv19kzzw69vjqhprl8sgsghw71gxmp91c6i1pv5a2"; depends=[]; }; + BgeeDB = derive2 { name="BgeeDB"; version="1.0.3"; sha256="0g84hyirg3blbk6vxwjazgvpqzn384i6i01r7fxyqfdyfczprsfp"; depends=[Biobase data_table dplyr graph RCurl tidyr topGO]; }; + BiGGR = derive2 { name="BiGGR"; version="1.8.0"; sha256="15ffri2xdjwqxf7mn6mxk5h9c7m0xkq2di6nlvdwvapwm9945ldq"; depends=[hyperdraw hypergraph LIM rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.2.1"; sha256="0y32y9vfs1sh7lwpkzpsmvgrll3x5l7y8xm3rcxalag17lkfax65"; depends=[igraph Matrix slam tsne]; }; + BiSeq = derive2 { name="BiSeq"; version="1.12.0"; sha256="14gr8dmkpm2wzdwlhrf9gkj9307cxpsap7a0a6bfip2zgrp82414"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; + BicARE = derive2 { name="BicARE"; version="1.30.0"; sha256="0faq2w40ikgrzcf39908icb0kph9sxbrplh86m12xwjwsbfwys47"; depends=[Biobase GSEABase multtest]; }; + BioMVCClass = derive2 { name="BioMVCClass"; version="1.40.0"; sha256="1249q8qpnva9a1wh1q8mi0x2yggbg5kmfkcv75wdbzmc82hkck42"; depends=[Biobase graph MVCClass Rgraphviz]; }; + BioNet = derive2 { name="BioNet"; version="1.32.0"; sha256="0zrfdlqfy18zk6z8a3slg8ksywknjbywr5r90ksyfqmvd869ick2"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; + BioQC = derive2 { name="BioQC"; version="1.0.0"; sha256="0zqpdfdjlsfm203kva8jfv09rwdwmr47daz1zjj06p1m82bwhg1v"; depends=[Biobase Rcpp]; }; + BioSeqClass = derive2 { name="BioSeqClass"; version="1.30.0"; sha256="1gcy27f9jim5b5q7979pz5m9rbphij0cln4mhvzwmkdwvi2ddyj8"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; + Biobase = derive2 { name="Biobase"; version="2.32.0"; sha256="0q4icv9n5rc2qfkv6k1wjhmfcpzcyr8f45m2z3xharbdv912kl1i"; depends=[BiocGenerics]; }; + BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.34.0"; sha256="1g4307x962ccvxdb421n3cksrrydglmp0hjhwlqlvfyddmkxmym0"; depends=[Biobase]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.8.2"; sha256="0bvkhxmr25nb0gkncifbc3x48i5zgls3737g3xais6jx16wd4q35"; depends=[BiocInstaller biocViews codetools devtools graph httr knitr optparse]; }; + BiocGenerics = derive2 { name="BiocGenerics"; version="0.18.0"; sha256="1jjp48vbph09w5bmc7368gjjywsa1lmzfybpiwlypr60b51vlkp6"; depends=[]; }; + BiocInstaller = derive2 { name="BiocInstaller"; version="1.22.3"; sha256="02qkfq6f2b7v9klri6d1nv21r54bywv1zd5x47ka0jhhp946cqpr"; depends=[]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.6.6"; sha256="1l39zmvhjlvlczrk5wal4y2s4g0b2kmaczgq5biah9qn45y474mw"; depends=[futile_logger snow]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.0.3"; sha256="06aaj0snj0y3bhhfh7lr949fi6cg7gz6fwf5drdm10ckbs4zp9dk"; depends=[]; }; + Biostrings = derive2 { name="Biostrings"; version="2.40.2"; sha256="153rfws5sdha324p1nv7jp75ip6ny0f62jzhqcvs46l85h3i8zgh"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.16.0"; sha256="1w585sk92053pwhw1h1qd421rr7s42cm8l8b6mm9cdvrf9095p9r"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; + BrainStars = derive2 { name="BrainStars"; version="1.16.0"; sha256="0y6l0c17xlm8q3nbhy21bk2mrbb0a660x6h19q14x01jm58gxwis"; depends=[Biobase RCurl RJSONIO]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="1.6.0"; sha256="0i5cqyvgyk9yjd8sc8mqrbw0dvkr24hkzlwvw3dn1zk553nwyg98"; depends=[RCurl rJava]; }; + BrowserViz = derive2 { name="BrowserViz"; version="1.4.0"; sha256="15j9cz4x9azn81myjnhckcil24ql3lbf83dfyl33qndszi9aqin4"; depends=[BiocGenerics httpuv jsonlite]; }; + BrowserVizDemo = derive2 { name="BrowserVizDemo"; version="1.4.0"; sha256="1krl88q9z7y2f25p8c9ghr9iyrldgw64xa5za6dv35d7aiihgr9s"; depends=[BiocGenerics BrowserViz httpuv jsonlite Rcpp]; }; + BubbleTree = derive2 { name="BubbleTree"; version="2.2.2"; sha256="1gg1qxvs930lq7f2awpgmfq455306snzvyp4qxx1cm25yklvc0h6"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr rainbow RColorBrewer WriteXLS]; }; + BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.36.0"; sha256="19yxbw4g4l1gmn14yrr8lmd627f4br5gkgzxpif21gmjvq2iaal1"; depends=[]; }; + BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.36.0"; sha256="00jwgdk1y8is5256q664ph9rhsm4n1pqzrzrbabf9ahq2cm75f96"; depends=[BufferedMatrix]; }; + CAFE = derive2 { name="CAFE"; version="1.8.0"; sha256="13lf4xm55qr8knjh644gb9a610lxxn8b97lkcprjv4n7pbc4vqxp"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEr = derive2 { name="CAGEr"; version="1.14.0"; sha256="14fkr47hq97wh6a9ig4k4gnybzwvcgf61yqqay4wma0aqi07cd3l"; depends=[beanplot BSgenome data_table GenomicRanges IRanges Rsamtools rtracklayer som VGAM]; }; + CALIB = derive2 { name="CALIB"; version="1.38.0"; sha256="1fb5w9bhwd9n818mrahbv2i6bllgzq2lslzkcybyp3llbrckbigy"; depends=[limma]; }; + CAMERA = derive2 { name="CAMERA"; version="1.28.0"; sha256="02shq9gh2zpj2vkpzyslqzqa5q68lzz6hr07pklj5qldyvgxma52"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; + CAnD = derive2 { name="CAnD"; version="1.4.0"; sha256="1hmyi76bhjihj7313f9jxcpnmpzs8r59s2prc2in4p1xmj2v26ha"; depends=[ggplot2 reshape]; }; + CFAssay = derive2 { name="CFAssay"; version="1.6.0"; sha256="1ni4hss9m2i8cxjnsslp0s2rlpikd78w3c0x1590l0pqki5kbgbq"; depends=[]; }; + CGEN = derive2 { name="CGEN"; version="3.8.0"; sha256="1zandlkv5fnm4zk6xpakpqbadrc9bgd73716rlwmlxrqqbqhqzdb"; depends=[mvtnorm survival]; }; + CGHbase = derive2 { name="CGHbase"; version="1.32.0"; sha256="1v4h2zlfrb45y80skl3f2hqnzz8gk1k387m7sz2izx33dwfxgdpd"; depends=[Biobase marray]; }; + CGHcall = derive2 { name="CGHcall"; version="2.34.1"; sha256="0vpvlddkihsvhr03m6kvn72p3dl2qd9ncr46va05hrvhgqxr976k"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; + CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.26.0"; sha256="033ckmn74zhmmy3fi8sbrvb2zzxyzwzmkdyal7djm63rf8f52km1"; depends=[Biobase CGHbase CGHcall]; }; + CGHregions = derive2 { name="CGHregions"; version="1.30.0"; sha256="1lglc0wglckc6c24yzjjc9l86p7i37ag837n75d0h4lv8x1yfzik"; depends=[Biobase CGHbase]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.0.3"; sha256="1a87shlr88i0ampzayybpnhmzd9k9j05fylb2q6n4ykk1igq5mdy"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; }; + CINdex = derive2 { name="CINdex"; version="1.0.2"; sha256="1f2gqfj88dlihqw0ba24sygcg7sr7pm91hv7s2jylys3r1013r0f"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CMA = derive2 { name="CMA"; version="1.30.0"; sha256="03yirnn476as8ml97valczx2ad6a2g22mfp4czg1a3kblw4s3r3k"; depends=[Biobase]; }; + CNAnorm = derive2 { name="CNAnorm"; version="1.18.0"; sha256="0wi76k3qz5zvhqyhx2zabw7baj1pyzi0srynbdws3zdcc2qaks57"; depends=[DNAcopy]; }; + CNEr = derive2 { name="CNEr"; version="1.8.3"; sha256="169pbzm6k1kqy5214s7ka5snmbz98zi515nfjki2crnvr1fjjgxb"; depends=[BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges IRanges readr RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.14.0"; sha256="0gp0fb1rqjlcxf3sa1miq5abzcmqnpnp62lmb88a6ljkisi2hqnq"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.12.0"; sha256="19yggabd3m5afd1lbivhqninfif4ra88nlf3kv4qi6ixvbp685km"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.14.0"; sha256="052hb464pq3sr513rmn8i12mz6xczfaqd9fax6djfwwdzprva315"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.14.0"; sha256="07xyqd51pz7ygvya4pvqpapglj82w4fwmra7c7r1yny7lcq7ylh6"; depends=[CellNOptR genalg]; }; + CNPBayes = derive2 { name="CNPBayes"; version="1.2.2"; sha256="1r1spk29zy7sc9kgyh1r2s7awc3hh5rl2c1p5chhik39lpdvmnbs"; depends=[BiocGenerics coda combinat GenomeInfoDb GenomicRanges gtools IRanges matrixStats RColorBrewer Rcpp S4Vectors SummarizedExperiment]; }; + CNTools = derive2 { name="CNTools"; version="1.28.0"; sha256="1iwgcphdcd5hxb4a61s30lgdp10s0435vkjz6cvhriimwq0bia4z"; depends=[genefilter]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.2.2"; sha256="1mcdyib8gbg4w9m3r437z3a1az249pgad0db2w9cjk78hblxsi8d"; depends=[exomeCopy foreach GenomicRanges ggplot2 IRanges NOISeq openxlsx plyr Rsamtools S4Vectors]; }; + CNVrd2 = derive2 { name="CNVrd2"; version="1.10.2"; sha256="1r0fjb6br699rkkqpkpwi8s8bk9gv5lgck4xfgbydjllbbvmiq35"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; + CNVtools = derive2 { name="CNVtools"; version="1.66.0"; sha256="1v6y0j20d306snr3r8zrvk574ybcyg00pjxjya09r6srmci2bz74"; depends=[survival]; }; + CODEX = derive2 { name="CODEX"; version="1.4.0"; sha256="0cjfnryzxxhmhcbwsf34509b7srgxzlv4barrh8h8dyq2wfzzrqp"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools]; }; + COHCAP = derive2 { name="COHCAP"; version="1.10.0"; sha256="0qdwd7igd2aaqbwl5lpfrzw9qilz651b1p88794qmxwih7lmd6s5"; depends=[COHCAPanno WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.10.2"; sha256="1y9r6d9gd1fbvmxi3cvxcmz2b3n9gbncw6p2s8gjdzqj7i0nar7x"; depends=[abind clue data_table knitr plyr RColorBrewer Rcpp scales]; }; + CONFESS = derive2 { name="CONFESS"; version="1.0.2"; sha256="0xc8bns00980fwxdpbx48r6h7pddv2jiplw38svmsv497zcb2mny"; depends=[changepoint cluster contrast EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + CORREP = derive2 { name="CORREP"; version="1.38.0"; sha256="16zhb5ajkh10azb2mkjbq6hmf6vqvxz3bzm4q424ir4azfqrd3qs"; depends=[e1071]; }; + COSNet = derive2 { name="COSNet"; version="1.6.0"; sha256="16gfbz6i5kmi8msgs0n5igybxz9kd4qyqv3p2dhr6n5nxzcqlhfw"; depends=[]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.12.0"; sha256="0kl20amakkyl3296zbfifi669ajm6i9x4hslav20ibzykgdwkscc"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; + CRImage = derive2 { name="CRImage"; version="1.20.0"; sha256="0061qhplzjwhdyqa1m4jzwfmpjlc24a87b5z3p7yr2vrihp66n7y"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; + CSAR = derive2 { name="CSAR"; version="1.24.0"; sha256="1m48njl4w0x7dyxqsfpflchclwy8nj07ldwckkh6522zdqmijb46"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + CSSP = derive2 { name="CSSP"; version="1.10.0"; sha256="0p2zs1ny4khmdpnbma53npb1lh4d8fh7szp2g8xhnilvmj744y1q"; depends=[]; }; + CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.14.0"; sha256="13nivw19hqaglg3v6pmqshwy2gnfjvigciw3wpl2791a22iaimn2"; depends=[AnnotationDbi limma qvalue]; }; + Cardinal = derive2 { name="Cardinal"; version="1.4.0"; sha256="0b4yb6sf27by2cjqy6cr4qrzs5ms83h210m1777vy33c7l4idlc7"; depends=[Biobase BiocGenerics irlba lattice ProtGenerics signal sp]; }; + Category = derive2 { name="Category"; version="2.38.0"; sha256="0c8px9ar589f3iqkbk9vfhwj30dpnxj81h8sfq20cl1cbmcx2a04"; depends=[annotate AnnotationDbi Biobase BiocGenerics genefilter graph GSEABase Matrix RBGL RSQLite]; }; + CausalR = derive2 { name="CausalR"; version="1.4.3"; sha256="0307k6wnhar675l25xvwi0h97x6jpi64a5y874h8gqm2a5f0ybyl"; depends=[igraph]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.18.0"; sha256="0vqjyjn2248mpc1lc4p4sivf1lhvjiwvgyi0jifm9as2yqz2np7k"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; + CexoR = derive2 { name="CexoR"; version="1.10.0"; sha256="0g2ln2l3vlp86zymyf2bdlc3g2piwv65vaxb7w7wd8ngp06zqais"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + ChAMP = derive2 { name="ChAMP"; version="1.10.0"; sha256="168z9lgfmhmymflfiml8g8kq6v695r94sfjhcng8wjkjn8dfbz6x"; depends=[bumphunter ChAMPdata DNAcopy doParallel GenomicRanges Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest impute isva limma marray minfi plyr preprocessCore quadprog qvalue RefFreeEWAS RPMM sva wateRmelon]; }; + ChIPComp = derive2 { name="ChIPComp"; version="1.2.0"; sha256="1l120wiq8xmvxa513vy4vgz34ddbh870djr776yvlcsrapxdl2iz"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.8.9"; sha256="1d3rm2shs2f66dahllspb4sgnqzkds6ds0b1pp6jnrzkqhw07s5h"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.14.0"; sha256="1ilqkx21jsvj3x0im4fgp4kacspynqn234pjj6vpsx1981lvavxy"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.6.5"; sha256="0mncyh1ixsp4ngpc8flmkq1czi1kkgcy14ws556rymkx02v3c9pc"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR S4Vectors seqinr SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.8.9"; sha256="0c2sm9zs377iq9fhpqlmqkfxxldww97yd0p1isbvmzz4m8j81nqb"; depends=[AnnotationDbi BiocGenerics boot DOSE dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.26.0"; sha256="14c4hyzj19c4r8s74zfpkslv0nswmb2pqf0pihn43hycn1z9dhfi"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.26.0"; sha256="0b992sv8xrrafrj30bmgmy1p7zb5qdw5kyjm23bmnk7jd9fck382"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.10.2"; sha256="0jxnlwprn8r8mwqgkij6r4xrh94rxx8l44h1x3scplkphdwslxbk"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="2.24.2"; sha256="02idsylmrpm2g20vbg81i12r6snp95lg0wbljcvrri91p09xb8xy"; depends=[BH BiocGenerics DBI digest ggplot2 Rcpp RCurl rjson]; }; + Chicago = derive2 { name="Chicago"; version="1.0.4"; sha256="10dx3ka4habmgw1ykybpb3f93qn4xghy2mivmym904i8fgli28ys"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; + ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.26.0"; sha256="08zpng276f2dq56sgmzrjpf76plh9778f11liw01yx0c16ysxvj5"; depends=[annotate AnnotationDbi Biobase BiocGenerics IRanges rtracklayer]; }; + ClassifyR = derive2 { name="ClassifyR"; version="1.6.2"; sha256="1vz569b6prmndq4vw7g6xprx39ckprhi8bk0hn7gj62hv4drcalv"; depends=[Biobase BiocParallel locfit ROCR]; }; + Clomial = derive2 { name="Clomial"; version="1.8.0"; sha256="1vzzb1lxmzwihihi4241xhj3l0szllzvq70da6nsir4sqikfljdm"; depends=[matrixStats permute]; }; + Clonality = derive2 { name="Clonality"; version="1.20.0"; sha256="19fizpvnpzqcjlkyalg341c3v5w9ll7a6h3g2fqnq4ffn1n61a05"; depends=[DNAcopy]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.0.3"; sha256="15pfs74k6ggp2v1ilbgzv5ab0w2rvq9f4igxzaq17krdakgq2krs"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + CoCiteStats = derive2 { name="CoCiteStats"; version="1.44.0"; sha256="1v22ld0iprp2c3hrr0vnfga2j1wvlay43p9g4mdbkiw7a6mxi21x"; depends=[AnnotationDbi org_Hs_eg_db]; }; + CoGAPS = derive2 { name="CoGAPS"; version="2.6.0"; sha256="0wy072pdjss5jzk5s9vm70y9xj6basqwhbiawllr716c7shcgmlb"; depends=[BH gplots RColorBrewer Rcpp]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.8.2"; sha256="19i9mnbqnfaglfljgngcqw63gg1nka4qcqrn1l6siqx15sfc77zb"; depends=[arules igraph shiny]; }; + CompGO = derive2 { name="CompGO"; version="1.8.1"; sha256="18vlkgrdsd2hq2w787zqg2b0hyqnxsjnx82nnk024fsirgrb5p6a"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.10.2"; sha256="0974qmzy93msn0xr1bz98bzmmq3pnc2y43116yv7vnaabqb2mml1"; depends=[circlize colorspace dendextend GetoptLong GlobalOptions RColorBrewer]; }; + ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.36.0"; sha256="1kb2h46hp20b2mij120nz8lmn8icbjm0ixchg0p4izhsj1g3l8s2"; depends=[ALL Biobase cluster]; }; + CopyNumber450k = derive2 { name="CopyNumber450k"; version="1.8.0"; sha256="0swjl0jh25ybnayx2q7kk6f01q1vjgplp5791im5r4q6djdisfay"; depends=[Biobase BiocGenerics DNAcopy minfi preprocessCore]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.4.0"; sha256="0lr9m7b5hn3a983y6614905yhs86676x53d78i2bk0ndh7p5hah9"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CorMut = derive2 { name="CorMut"; version="1.14.0"; sha256="0asakw2bqwb8qp0zcwjachyx4w7kiw8fzwwa7sllfpa57m5m1v64"; depends=[igraph seqinr]; }; + Cormotif = derive2 { name="Cormotif"; version="1.18.0"; sha256="17ldh2yfiapka2clz6j71jqla6a7avas3hnnxpi0p0598vawp6x0"; depends=[affy limma]; }; + CountClust = derive2 { name="CountClust"; version="1.0.2"; sha256="192i2mvzsf558lsh2zshvgrm9q0a4xbhbgjjma1403v5cyrks8j1"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam]; }; + CoverageView = derive2 { name="CoverageView"; version="1.8.0"; sha256="1z4prmf20r2y872yjlj5zza31rn5dlcn95348gib04hwwba6d5ak"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.0.2"; sha256="0y16rlk5yi2bsq28m0gw4sbr0w1rf4msyimgh28rh0imd63rmmwc"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + DAPAR = derive2 { name="DAPAR"; version="1.4.8"; sha256="0m1jbv3l3qz972q53wylrybl872ldxm1sscyw8l8p7rcznk0q5fl"; depends=[Cairo cp4p doParallel foreach ggplot2 gplots impute imputeLCMD knitr lattice limma Matrix MSnbase norm pcaMethods png preprocessCore RColorBrewer reshape2 scales tmvtnorm XLConnect]; }; + DART = derive2 { name="DART"; version="1.20.0"; sha256="17x980mix19pb72yag6v0ingq64vn6hpynfpy4vcjrlhf9874pf6"; depends=[igraph]; }; + DASiR = derive2 { name="DASiR"; version="1.11.0"; sha256="078ligzx37pa3apd5xpjbf8pq0i1q7cz709767aalbwhbw2zf6ak"; depends=[Biostrings GenomicRanges IRanges XML]; }; + DBChIP = derive2 { name="DBChIP"; version="1.16.0"; sha256="1ilq33jpynz51ipsrjdbwcbl6h6a40l7d230mfqzq922347dd9ll"; depends=[DESeq edgeR]; }; + DChIPRep = derive2 { name="DChIPRep"; version="1.2.3"; sha256="10h2nwzd9z7c0nb1pw28zivq0fjpn7slzavhcwjfbynixhq2v84i"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.0.2"; sha256="01plhsbw94pjvj9hc9css0zj7vp3xzad39sbwicx7rc0wpzk5knw"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEDS = derive2 { name="DEDS"; version="1.46.0"; sha256="1pli8wgcgcsdv2r4gw9fygiv842iyi1a2w80axla98l53wjzljyw"; depends=[]; }; + DEFormats = derive2 { name="DEFormats"; version="1.0.2"; sha256="034kbmsjgdg916cgihjmaa237dx6xn24ndz50a5fxvjmpy8y99am"; depends=[checkmate DESeq2 edgeR GenomicRanges SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.24.0"; sha256="1yarc6xr0swlc6q583kmm65vpp195v86h8gsidr9as2y6cm6ggww"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.8.2"; sha256="1763z307m4k8h66xd7fjzljxggcgnf74k0rhdn40j83mbvcs4ar4"; depends=[BiocGenerics edgeR ggplot2 plyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.26.0"; sha256="04fxbnhgg6l674vr0xav0fl7vg8isqsnksvhanssarvaa1wqlrys"; depends=[qvalue samr]; }; + DESeq = derive2 { name="DESeq"; version="1.24.0"; sha256="01v5ikwpzxlp6f9p17qrvxbigxdhr0y24b9pjkh7n6ak2faqz5k7"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.12.4"; sha256="12h77f0dpi5xaj7aqf50kkyn6lq9j7bcsly1r0ffmyfcszrp1sfx"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.18.4"; sha256="0dm9n0k26gg78v8qmnjly3mdigfjdp2lzaabyss8ilcbx81z64ic"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DFP = derive2 { name="DFP"; version="1.30.0"; sha256="0r5jjzmirnb4ngcb497yqg0fg1di1lcax2nlhbq27v1grb9001q9"; depends=[Biobase]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.4.2"; sha256="1s57yfjajjw9m5i15p3wywfc1dins22fwd18bly7a14yxb6qdyrk"; depends=[GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="1.8.6"; sha256="0y1ysmavim5jc0mr1higk5sz9cg8bydav7zj2vn0p6da45ijjzqd"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi plyr S4Vectors]; }; + DMRforPairs = derive2 { name="DMRforPairs"; version="1.8.0"; sha256="1hjw3d3pwdg10bwkxwjcrcjxrcanyk13zbrhb50p0zhys5gksp78"; depends=[GenomicRanges Gviz R2HTML]; }; + DNABarcodes = derive2 { name="DNABarcodes"; version="1.2.2"; sha256="12qw1f3h4sb89fv5i9wr65hb86x84a6j5f3khwv8r9w0y6cp9llq"; depends=[BH Matrix Rcpp]; }; + DNAcopy = derive2 { name="DNAcopy"; version="1.46.0"; sha256="0vwv2mndfjpcjp4sybg75abc7xnx8zyw8zjk717k6xh8c33ymcip"; depends=[]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.0.2"; sha256="10x1331rmvdywsfd9agzir4lalv97bzwsa4vwifw7gizdbb3a5b8"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOQTL = derive2 { name="DOQTL"; version="1.8.0"; sha256="0vlvvwhqg8vw45p6kp3p3nazvy9hkpr8wz8sxrvkdy6pyj4nwws1"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; + DOSE = derive2 { name="DOSE"; version="2.10.7"; sha256="1i3pfkvx7z1n6wzb4rnmdrnsjisfl0lnh29wl1k8kj1pgj1qbjy5"; depends=[AnnotationDbi DO_db ggplot2 GOSemSim igraph plyr qvalue reshape2 scales]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.0.2"; sha256="0gkv3xvsklnhsyiwzxwqvsj3nii9rqswfbvw7nxk209zrmmqkj7l"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges reshape2 S4Vectors]; }; + DSS = derive2 { name="DSS"; version="2.12.0"; sha256="0l9sgp198pdmd36hipsk3whf29d44qqay2d1k4mchsbq0qbmwsza"; depends=[Biobase bsseq]; }; + DTA = derive2 { name="DTA"; version="2.18.0"; sha256="0y7516d5yxijnl15wmvh8n5wyp3551ph5vzdm6i0yy0riaihqki8"; depends=[LSD scatterplot3d]; }; + DeMAND = derive2 { name="DeMAND"; version="1.2.1"; sha256="1haqr8mq77jvvkrc1pfs37i89fd3zjjdi59nnl9qlll1k761qh99"; depends=[KernSmooth]; }; + DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.14.0"; sha256="14bd8yd5zy4nagmcfr9r510410va9avcljaxxwjbbprp6chxm64h"; depends=[ggplot2 limSolve pcaMethods]; }; + DiffBind = derive2 { name="DiffBind"; version="2.0.9"; sha256="0sy1mb986mi1cxzy1ar5hmshzmqdw8082h725d0yiinymqbfc529"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; }; + DiffLogo = derive2 { name="DiffLogo"; version="1.2.1"; sha256="0dj8qkxx17sn1yh5wwcb4mmghsigicfz5kb5sldk3j988f0pnbcj"; depends=[cba]; }; + DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.14.0"; sha256="14xr8g3bzhni780pafi2jm53fd124xw9rnvdanhqzwqk5l8mrqzn"; depends=[BiocGenerics IRanges S4Vectors]; }; + DriverNet = derive2 { name="DriverNet"; version="1.12.0"; sha256="1xwvryjf98hi4l5g4qwg8ilw3kw206r9ipn4dy5jv5kzgirp3p4f"; depends=[]; }; + DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.12.0"; sha256="1bj86zlcp73km49zqv8ijlq9zq7bjnmf2bhcdhrcf0rixph52q62"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; + DupChecker = derive2 { name="DupChecker"; version="1.10.2"; sha256="0npx294zvpypk23z0h2pmyazc7w8d5wywl6psyr2m2vhmcrax5xl"; depends=[R_utils RCurl]; }; + DynDoc = derive2 { name="DynDoc"; version="1.50.0"; sha256="0j00kjlv1h9vx5jmq7cwj2vwnif52rqcs4mb0j9dv1mndqcdf2p6"; depends=[]; }; + EBImage = derive2 { name="EBImage"; version="4.14.2"; sha256="1dvjnkzjfsshm15jxcmzs82jarxqx9dr8z5kafyxjklh2arivwgx"; depends=[abind BiocGenerics fftwtools jpeg locfit png tiff]; }; + EBSEA = derive2 { name="EBSEA"; version="1.0.0"; sha256="11wgdgrqv83bhlngl9wqrazydsjvawnwrdb9b82h50hd5h080vvh"; depends=[edgeR gtools limma]; }; + EBSeq = derive2 { name="EBSeq"; version="1.12.0"; sha256="0yqrrabx78ml8na1ppwg6b0a47pc2c488c5pfavyi75v04k708yp"; depends=[blockmodeling gplots testthat]; }; + EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.6.0"; sha256="001swq9m414mk6r8j5iglfbp1cw3xp165hf68jk2dy9sz0p0l25j"; depends=[EBSeq]; }; + EBarrays = derive2 { name="EBarrays"; version="2.36.0"; sha256="1jvfk0f4rr8f502vhgh4fq5x7m9823xl3ncyl032rdsrwbildbxp"; depends=[Biobase cluster lattice]; }; + EBcoexpress = derive2 { name="EBcoexpress"; version="1.16.0"; sha256="069smdyv8bpd5v2nz2i67h6vqpfdf5r9n5s2cyk7g136a0p29zca"; depends=[EBarrays mclust minqa]; }; + EDASeq = derive2 { name="EDASeq"; version="2.6.2"; sha256="05infzrah41xh3mzbckh2g9hywbn3xqwx3jjzvyxs3q5z209av91"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EDDA = derive2 { name="EDDA"; version="1.10.0"; sha256="10rlahznhva9b6f4isb604a7di753md6l260z987291vp70m0pyf"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; + EGAD = derive2 { name="EGAD"; version="1.0.4"; sha256="0ysn42wpji4nphdwdy2j25v137rlxpyvg2wqifqm0vh09m7mgwr5"; depends=[arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.0.3"; sha256="1f7fsh3kzhq3l55lczxmv724hwy6pq4gb1rnhc4pkqandl7vvsig"; depends=[AnnotationDbi Biobase edgeR EGSEAdata gage ggplot2 globaltest gplots GSVA HTMLUtils hwriter limma org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview safe stringi topGO]; }; + ELBOW = derive2 { name="ELBOW"; version="1.8.0"; sha256="0133j9zdmpy22l4672dhz8y1i2hi8a1izxakrvd0ldbmg502jscw"; depends=[]; }; + ELMER = derive2 { name="ELMER"; version="1.4.2"; sha256="0nbbh2rwynr28y2rmsd0nmpc5b22x5bbvhgrh447w9znl05smqx6"; depends=[BiocGenerics ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra Homo_sapiens IlluminaHumanMethylation450kanno_ilmn12_hg19 IRanges minfi reshape S4Vectors]; }; + EMDomics = derive2 { name="EMDomics"; version="2.2.2"; sha256="0qdachnnhvwyh9v3s9isd6yyksxi8gs56nf29v5rfw7429v2wgmf"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; + ENCODExplorer = derive2 { name="ENCODExplorer"; version="1.4.3"; sha256="0khc5qfwjl2adqgayjz5yhg0g3jw0blkqxqih9jxkccrw83b28b6"; depends=[jsonlite RCurl RSQLite]; }; + ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.20.0"; sha256="012f7scrmnxqjg52gjhswrrxbvagsdxmiwbxs4n6358yf214wr2h"; depends=[rJava XML]; }; + ENmix = derive2 { name="ENmix"; version="1.8.0"; sha256="01r332wngrvzg5daspaf6dqkwanyc40mv2k6qc8iz2wvh3vdpg4q"; depends=[Biobase doParallel foreach geneplotter impute MASS minfi preprocessCore sva wateRmelon]; }; + EWCE = derive2 { name="EWCE"; version="1.0.2"; sha256="1qcqadqfjmhr96mnd86wx9x5ncc6pm593kcqx8wnlgkkdzr6flq5"; depends=[biomaRt ggplot2 reshape2]; }; + EasyqpcR = derive2 { name="EasyqpcR"; version="1.14.0"; sha256="1vnh0g87x52qlrqk1nwfcaa4r7nb7mr6xdzrxqsivrx13k5d070q"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; + EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.0.2"; sha256="183zn477pjrj71d5b3dnkf4mgvjb8razply0lrpq8ickvqn3z3s6"; depends=[]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.2.2"; sha256="1fky5gb6ix2y0xfn8whwsrw793msmcrf5bjlpzk1vmvyyc5pvc9a"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.2.3"; sha256="0l1zxb5425li1jzhqd0x1dwwhl92g2d5j5jrms2bpl70klyy2af1"; depends=[AnnotationDbi Biobase biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; + ExiMiR = derive2 { name="ExiMiR"; version="2.14.0"; sha256="0krk4dgnla63dmn5r3qy5nmq0rkmff26qdhw7rilmh3yb95ri7lx"; depends=[affy affyio Biobase limma preprocessCore]; }; + ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.0.3"; sha256="1yvvqhd2d7lz8fwfrag68xn7sndhag89dnj37w5zwg0hfippyas9"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; + ExpressionView = derive2 { name="ExpressionView"; version="1.24.0"; sha256="1sirhz91xfcbsya2s9y565hffrsjbyd4bippn92x5c8y4qhyw11z"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; + FEM = derive2 { name="FEM"; version="2.8.0"; sha256="1jgy0k5a7h46vda32a2m077w4z1gif3vvxxch7qp7hx982y4xyjy"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; + FGNet = derive2 { name="FGNet"; version="3.6.2"; sha256="1b4v0hx1xrzi7zyah8wb983akr9jl3f4xqr9b5yy8cv72bqvch0x"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; + FISHalyseR = derive2 { name="FISHalyseR"; version="1.6.2"; sha256="1j4gsmzzkbz0mifqqrfgaxxrvprc1rp62dhv897wx0yhn893fynv"; depends=[abind EBImage]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.8.0"; sha256="02y0jx0lqsikh947cs6byjahbi6yxplwv6gqfrdv2imd47g38309"; depends=[fda MASS]; }; + FamAgg = derive2 { name="FamAgg"; version="1.0.2"; sha256="17v6jy03f3x6a09f5fdqkw0gd4h5ipl1bcsqzq39vvkmrvdr6q09"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.2.2"; sha256="18wz62sr4nf3df165bik57khz7wq5xab6s6b100ml7crn912a7li"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.4.0"; sha256="1rixa090sdbv8crfccygaq3lhx5171fqaf7vn8dsbawfqczzmyam"; depends=[jsonlite RCurl XML]; }; + FlowSOM = derive2 { name="FlowSOM"; version="1.4.0"; sha256="05rsy2hdjv4fr9bv1b8phzdj0xw4ilgk8m3dgqlnlm6m8sylhnk2"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; }; + FourCSeq = derive2 { name="FourCSeq"; version="1.6.2"; sha256="13c23ndssfhzcqv8wl37zmswajyk4x08aj0v562j0zcqnqcrscg1"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; + FunciSNP = derive2 { name="FunciSNP"; version="1.14.0"; sha256="197v7kf6xl3b4jkyjpzgy1z49dh4dbrf8nsfa9mlzi114l5kbyy8"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + GENE_E = derive2 { name="GENE.E"; version="1.12.2"; sha256="0ri377knly3cwlif64c68rsk8f1fjdfx1abq55j3lr30pxyphc97"; depends=[RCurl rhdf5]; }; + GENESIS = derive2 { name="GENESIS"; version="2.2.7"; sha256="1dllw2kjrnmp61xakxavwbrgr1rfrad7hs2msbc8k6axw4n90hl4"; depends=[Biobase gdsfmt graph GWASTools SeqArray SeqVarTools]; }; + GEOmetadb = derive2 { name="GEOmetadb"; version="1.32.2"; sha256="1pr2zl4814b5zpzn0msyy2hwf39kv03ci3fi5113xlpbiy1rj9ch"; depends=[GEOquery RSQLite]; }; + GEOquery = derive2 { name="GEOquery"; version="2.38.4"; sha256="1ckgxd7h8009h0bnmvggpd6yppp461zw2bcqkda5hiwys8mfb78x"; depends=[Biobase httr RCurl XML]; }; + GEOsearch = derive2 { name="GEOsearch"; version="1.2.2"; sha256="0fdkf590kvjscvvjg2lfkz7bw7jg2vpay1z99l9yrnpgaqv146vl"; depends=[org_Hs_eg_db org_Mm_eg_db]; }; + GEOsubmission = derive2 { name="GEOsubmission"; version="1.24.0"; sha256="0fvdps5ly55j442lisg6hj96wn6821427xc1bdfyc7ri1ds4fxgy"; depends=[affy Biobase]; }; + GEWIST = derive2 { name="GEWIST"; version="1.16.0"; sha256="1qrs0apb27isv8aabv64ym1rr4zvv201v43zhmgdjdlbmwcfyjky"; depends=[car]; }; + GGBase = derive2 { name="GGBase"; version="3.34.0"; sha256="1nbqpfdpi3bh26wqmvrrfk8khpy6sgsrvkj7b193ycbdnsjv2iqk"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; + GGtools = derive2 { name="GGtools"; version="5.8.0"; sha256="1zrl22p5cfhw6w0034176js8y0rzmdhdias1acin7dwbw588rp5l"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; + GLAD = derive2 { name="GLAD"; version="2.36.0"; sha256="09wpmh5mahvg16hfl8h5rqvrxpc81df4k7z5wv93s0p41kx6kil7"; depends=[]; }; + GMRP = derive2 { name="GMRP"; version="1.0.0"; sha256="15rh0sy29v91c0s91vjfmci64ar6x58lfm3ixgwm6z7lf0xhbrl3"; depends=[diagram GenomicRanges plotrix]; }; + GOFunction = derive2 { name="GOFunction"; version="1.20.0"; sha256="06y42nydbc19z5kzp80iy3b3xhq0wmk2mfsp9chxvgrc54a21ynj"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; + GOSemSim = derive2 { name="GOSemSim"; version="1.30.3"; sha256="15g7r0cccfphm32pw9bmk28k54vl21b0jczx8nr1z2q5kgg04ca8"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOSim = derive2 { name="GOSim"; version="1.10.0"; sha256="03s79r03f2nv6blf3qrvfazx89jiyyn9bm41b53rig1lpadp2fzh"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.8.1"; sha256="0s4jsk4j2yxh5mqvvni5c606hyfqjgh9p7g4rssh9gq9saglpgni"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOexpress = derive2 { name="GOexpress"; version="1.6.1"; sha256="09m0g03f0s9fnp1c1h1d1mv0dw73msbifpdf8ldyqcx75c3xdx6k"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer stringr VennDiagram]; }; + GOstats = derive2 { name="GOstats"; version="2.38.1"; sha256="1hhw6vqr8f3g4jzq0v8f2za0r1h117j5s6av87zxs41cv7dq1wb3"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.6.0"; sha256="0skhvpr80jgxfzk1c7jf2206jnxs44v6r2j39l4xj4llcfjf46b1"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; + GRENITS = derive2 { name="GRENITS"; version="1.24.0"; sha256="1qhjqpjdasql1i8njnq431qp8zqklb1xh170lqlwjcfhhmnprzai"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; + GSALightning = derive2 { name="GSALightning"; version="1.0.2"; sha256="1ahcm9iikql1d73ng7irs37rwp99q1jp5g2nbxdk7436f7hglcgv"; depends=[data_table Matrix]; }; + GSAR = derive2 { name="GSAR"; version="1.6.0"; sha256="1q3pjwf66mi3kws88whw72xfh5xskvw55g7wiq3dp0kr0r45d5am"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.2.0"; sha256="0vq94s36yq591lgva3v1317kh6dpq3wvy38ayxab0zmxzqhnighb"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.34.1"; sha256="1mvgja8malrnbzfakzjl5mmi7g080kj8zgxwc5964hcmn33i937j"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEAlm = derive2 { name="GSEAlm"; version="1.32.0"; sha256="0axqalz4ixjsv91ga3sc9f9f5ncm8lr5fk6v40ng58nzb6xsk0sc"; depends=[Biobase]; }; + GSRI = derive2 { name="GSRI"; version="2.20.0"; sha256="0mwv7riwgg0jc06skna8cph7q7ry1a9k7alrhxxgysd9458m8v9l"; depends=[Biobase fdrtool genefilter GSEABase les]; }; + GSReg = derive2 { name="GSReg"; version="1.6.0"; sha256="1wibhyqi2kfbi5fqmx867lxb4dw8ymfk6xkg0vjws5d2a5r5yf1d"; depends=[]; }; + GSVA = derive2 { name="GSVA"; version="1.20.0"; sha256="1n3hi48p7p5alzlw4rlxk7mp5bp3ybkf76a8b2swa7ifq52jiin2"; depends=[Biobase BiocGenerics GSEABase]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.2.1"; sha256="07ihkg1am7mfwc6f51zwpmm41sh1a3fsdkbdwk0p396f3069lva7"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors]; }; + GWASTools = derive2 { name="GWASTools"; version="1.18.0"; sha256="07rxyl5b32ydnywx6z9ic156s1q6nn8wqx096pknyawi7wi9k3ad"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf ncdf4 quantsmooth RSQLite sandwich survival]; }; + GenRank = derive2 { name="GenRank"; version="1.0.2"; sha256="0dipv90wskcymvkmdw0313w5asz6wcnpx4nph3ab7kidgii6d8gp"; depends=[matrixStats reshape2 survcomp]; }; + GenVisR = derive2 { name="GenVisR"; version="1.0.4"; sha256="1593xfyk9pz92ndxgjr0ma4b1q7kjkx03a9kln4y16y2rxvfm4zh"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; }; + GeneAnswers = derive2 { name="GeneAnswers"; version="2.14.0"; sha256="17zfm2zm52m6x4kc07d9n06xyfw4ym7rk6d8z4mgxrmns7v83dkw"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.2.0"; sha256="1k9f4vdg09h2bxs5gn7fjc6vm9zdq3afdcjl0bv33m6703k50k6i"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.18.0"; sha256="055n0m0nwblasr6rwd28zpq6iranyymm403dd5bqi4kq6zg6ld4a"; depends=[Biobase PGSEA]; }; + GeneGA = derive2 { name="GeneGA"; version="1.22.0"; sha256="1p77yncy6frzqyc22yhaqx63j8xkv4idfqysald7bc8n8cvk7x03"; depends=[hash seqinr]; }; + GeneMeta = derive2 { name="GeneMeta"; version="1.44.0"; sha256="1l1ldj01a7p0ygb055kfbl2j2cj0y9xgalbq9fdn07j21jxf6wxl"; depends=[Biobase genefilter]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.14.4"; sha256="0560351z8f7rv7jn1ff88y1z9lyn7hd53zghfkhy2mbkjwvbn3lw"; depends=[graph plyr Rcpp]; }; + GeneOverlap = derive2 { name="GeneOverlap"; version="1.8.0"; sha256="0dnp91knca25l5q62ga36p04kwb7a1drmzjcbyvhkxxfd6d7h6jh"; depends=[gplots RColorBrewer]; }; + GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.28.0"; sha256="0z2m96i7rv9vffw5h70lgkq9b6wj8m0p8n6nl184rkpq1d14fhk3"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; + GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.16.0"; sha256="1kj1xdscqhi84x89ygw9sc8yr991y19bc932ynhblhjrxs1fxrjb"; depends=[Biobase limma MASS survival]; }; + GeneSelector = derive2 { name="GeneSelector"; version="2.22.0"; sha256="1ykmmzr2cal43n72547ywl5w871pfxilhxnqdl2ki0dxss9l8cap"; depends=[Biobase limma multtest samr siggenes]; }; + GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.40.0"; sha256="17r1bqa0ay6d5dyihgxwv4i1mc12980dkc5j995c5qkpcg0f3zv2"; depends=[gmodels gtools mvtnorm]; }; + GeneticsPed = derive2 { name="GeneticsPed"; version="1.34.0"; sha256="04lgnrpx8zd1rz7zdsyvjbvnlg6l4r4rbf82xdr5bhrn9805hw7c"; depends=[gdata genetics MASS]; }; + GenoGAM = derive2 { name="GenoGAM"; version="1.0.3"; sha256="0ag9v97hdk7vi0052ksapvsgh61w6i5g4fp9lygyfvb5kbzh6k5n"; depends=[BiocParallel data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; }; + GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.32.0"; sha256="17w40q7ykmc01xgr72z2j5yk3gyvf5y62s17n0yk4vlary01g9iv"; depends=[biomaRt]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.8.7"; sha256="1x96468bbjx7z3ikp1dgr2krnz9pwx86vmssfbfrsikaxfs4q829"; depends=[BiocGenerics IRanges S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.8.4"; sha256="1cccvalmm83ilk1kpq31ll8kdy9xclsr4pm4mlcc7bmp0rwkd2p2"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.24.5"; sha256="17qpisdgqyjz2mnaiwc4dx7dg11pwq3mkvmkah9zn07g9rhh8f7p"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.8.0"; sha256="1blvi0817c2926msjiggmrizchqzmsa2ksvfl8yg13a45s52rkil"; depends=[Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.6.2"; sha256="1cm2zp9l9jdb6bgpq1sx799j24gs077ysvg02yn4qvag0p0xf1h5"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.24.3"; sha256="098a34hfgb5z120v6wpl5nv8v61nm65yg6xq0j7i9bigvxr7apg2"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.6.2"; sha256="04pq3f474lbhdni2hx942qs1wbsbq4454pgnr75bfj7q94rbx0fr"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + Genominator = derive2 { name="Genominator"; version="1.26.0"; sha256="1d4j1k2m19w7bh41xjpl898yxhd05b2ja2ysrrpnincigdzsrczk"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; + Glimma = derive2 { name="Glimma"; version="1.0.0"; sha256="147bjpll9rjz77wdhmn75pjxv8znihix5f5sm539m897inviabcm"; depends=[DESeq2 edgeR]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="3.40.0"; sha256="0ir53i68zvb9vjvsiwqhqgppkk6r6jm6ydjcff6264mhp5pbmjsf"; depends=[annotate AnnotationDbi corpcor globaltest]; }; + GoogleGenomics = derive2 { name="GoogleGenomics"; version="1.4.2"; sha256="03y56akzkz7dy6868kcy03gqsnsjl7si5cfsx972m8wrhx5wa466"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; + GraphAT = derive2 { name="GraphAT"; version="1.44.0"; sha256="1rb4zvlbljpvb0091j0phv6fdcpvk3f9b77dg3x2jcj321kbcgd2"; depends=[graph MCMCpack]; }; + GraphAlignment = derive2 { name="GraphAlignment"; version="1.36.0"; sha256="1nayinwnpqsn66idxyliwi6md7c7w3j9bdn4b049sqk45yq25v05"; depends=[]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.14.0"; sha256="14ia19g7k05r7hljybl8ipqh6bk2yc04l7vq3j30fxq9ahjx0l5h"; depends=[igraph iPAC RMallow TSP]; }; + GreyListChIP = derive2 { name="GreyListChIP"; version="1.4.1"; sha256="18fxm3mns373ljdsc6aqm9k3m6088fhg095bg6gamyd99dyf7y9p"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; + Guitar = derive2 { name="Guitar"; version="1.10.0"; sha256="1mgswk1gr2y5ilj8v07rincibg941i4rbmk8nd73xvw2pg83gvx8"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; + Gviz = derive2 { name="Gviz"; version="1.16.5"; sha256="0r83ml7jfpdn2286wh1614arla3ih5nqvjjnsb3n9883j2prakr4"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; + HCsnip = derive2 { name="HCsnip"; version="1.12.0"; sha256="11sfhf931xnk6qmxmfiybfs5izgr932r3r0xxbbm96xbm6xxk7n5"; depends=[Biobase clusterRepro coin fpc impute randomForestSRC sigaR sm survival]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.0.2"; sha256="0df0xyn8f58vycyakx1xsv0jz43mkhbr3d9bb2cc0p5082hwk65a"; depends=[BiocGenerics IRanges rhdf5 S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.6.0"; sha256="0838l4fnfany068fz20vrcr4m4yb6di88i0whn8hyfjm8ws21461"; depends=[]; }; + HELP = derive2 { name="HELP"; version="1.30.0"; sha256="0aql69piqrfgav9fh3ff1byamd3c9k8nil3a09k4affdxl3nhqah"; depends=[Biobase]; }; + HEM = derive2 { name="HEM"; version="1.44.0"; sha256="1fj92nzkng5cgy2wkifjmcpn2lfqw3ginyxzs36pxryz12v8yg2f"; depends=[Biobase]; }; + HIBAG = derive2 { name="HIBAG"; version="1.8.3"; sha256="0s6vcx03kzxyqddzr7h3qhf6m9ax7l9n9jx9amk2f046wfhy4z7d"; depends=[]; }; + HMMcopy = derive2 { name="HMMcopy"; version="1.14.0"; sha256="0ac2d8byinx6li1r622k960lpyihgf5xp0jdifvl5dmn1va0gmdl"; depends=[geneplotter IRanges]; }; + HTSFilter = derive2 { name="HTSFilter"; version="1.12.0"; sha256="03bd29q6irgq6nqfp1grq3dzv1x1pz5bl2sx1z4714i75i8wildw"; depends=[Biobase DESeq DESeq2 edgeR]; }; + HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.24.0"; sha256="0cmcihsqxacvxf4nan48i1f22bzz4g0j2vcn0vc3r4jirznxcjs6"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; + HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.2.0"; sha256="0v5m8ix7j6db2fa461w4c50rn7xp415gaa3dl78hwbhns30f0il0"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; + HTqPCR = derive2 { name="HTqPCR"; version="1.26.0"; sha256="0lk6qrq6in9y8xg1656m1j9mrwfajbadhr2ry7lyp8wx5acai7nz"; depends=[affy Biobase gplots limma RColorBrewer]; }; + Harman = derive2 { name="Harman"; version="1.0.2"; sha256="0v7szj4xh8xr4zg3p0x1gf7b278a6y8blz962ygj77pnccmqikf6"; depends=[Rcpp]; }; + Harshlight = derive2 { name="Harshlight"; version="1.44.0"; sha256="10dq78la4kby2zay69l3s9plrd271w5f8kmkmwxmscfqbv0zhi59"; depends=[affy altcdfenvs Biobase]; }; + Heatplus = derive2 { name="Heatplus"; version="2.18.0"; sha256="13rzsahx3a4w2s1v99kz4lg6sgll2md9ibf2jz7dkk8gafbn1yri"; depends=[RColorBrewer]; }; + HiTC = derive2 { name="HiTC"; version="1.16.0"; sha256="1rk3q4s4kpcbkm23ccw61p1isvrim3y3dhvi1kcs6yqbb3lg1nvl"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.2.2"; sha256="0gjv39l5sxsllc3c620ndnarvl4x2fd3i86pwy4wqy5riq5xxaph"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.30.0"; sha256="0przsvy6zqs4chwn0m625h421zi7dpapma7wib6v8i5lf85d4d2a"; depends=[lattice]; }; + HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.30.0"; sha256="0w2n511dkazajbm80kq9paypwphryf61x2rpfprc5va5wxhs36x8"; depends=[HilbertVis]; }; + HybridMTest = derive2 { name="HybridMTest"; version="1.16.0"; sha256="0g2cknzbj043m8gm8qps0mdnamcqg08pd40hm7fmz70piw7sjw3f"; depends=[Biobase fdrtool MASS survival]; }; + IHW = derive2 { name="IHW"; version="1.0.2"; sha256="1drhgvgl6gfzi0ii5dw86mw8bm6f008v07nbzn3865vq4l99kmm1"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IMPCdata = derive2 { name="IMPCdata"; version="1.6.0"; sha256="155633pgv06qqch0x8isczm7i5w4azg99vfzbbx31xh7y0dawb8y"; depends=[rjson]; }; + INPower = derive2 { name="INPower"; version="1.8.0"; sha256="12xixf4wzsa5fbcp7prbj7lg0aswlcqcx6f6q2y6x34g7jyh047n"; depends=[mvtnorm]; }; + INSPEcT = derive2 { name="INSPEcT"; version="1.2.2"; sha256="1bmd1f662nf6s2aw2lg7pfq2d5rqbmpj7zp7wp6abc94gm8vsxzx"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; }; + IONiseR = derive2 { name="IONiseR"; version="1.2.3"; sha256="1dwdkqf493c19p5b3phbj4g364h0aj32szjq3n3h3rn8aw0cjs87"; depends=[BiocGenerics Biostrings data_table dplyr ggplot2 magrittr rhdf5 ShortRead tidyr XVector]; }; + IPPD = derive2 { name="IPPD"; version="1.20.0"; sha256="030pyqdmlqmriwcm3bikk0wf4qjhkrdjb306csr7327iqq4kbm0d"; depends=[bitops digest MASS Matrix XML]; }; + IRanges = derive2 { name="IRanges"; version="2.6.1"; sha256="06pyam3bjjfw2m3l86rda503lsz2jcg645lcnhvrz6qi0nv359yg"; depends=[BiocGenerics S4Vectors]; }; + ISoLDE = derive2 { name="ISoLDE"; version="1.0.2"; sha256="1nc3r8y49fgvgx0vj2m79cd5ywnm93a6vqy20cr1llg4fpnmdlb4"; depends=[]; }; + ITALICS = derive2 { name="ITALICS"; version="2.32.0"; sha256="18afl5gkrzh89wzmlpsfjzcm32yl1521dm2vrdhmy1kjjsy1g1f6"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; + IVAS = derive2 { name="IVAS"; version="1.4.0"; sha256="10q5wmvwi10f81a0gss0shjv947yfghib1pk26cj04icr96v6b6f"; depends=[AnnotationDbi BiocGenerics doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges lme4 Matrix S4Vectors]; }; + Icens = derive2 { name="Icens"; version="1.44.0"; sha256="0aw92cq446dpwi6nnck72xvk67jwfr829klzbn9a6b0z53qmlb1w"; depends=[survival]; }; + IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.16.0"; sha256="1q7s0zy9bx1ypca232yqj25k8g3w33078dp5ik48j1ga71bp1xwk"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; + IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.20.0"; sha256="1z67dj5qil8l2acryqvax6v1qp0z4jnf1iiy1l87j09kyn2949p4"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; + IdeoViz = derive2 { name="IdeoViz"; version="1.6.0"; sha256="111vqwx7cxi419jzcz3yqhzv4436flj1h839rimn5vhlk9dlq6zr"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; + Imetagene = derive2 { name="Imetagene"; version="1.2.2"; sha256="1bfqjq3c62j5hirx95bi03q0mxnizgqsm6mf6snfd8b33752fy0r"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.0.2"; sha256="08nfnvchbimhdrywcf8bsghml5pwhb2ys2jyqh0nvmj9g19khhg5"; depends=[Biobase data_table ggplot2 gplots gtools pheatmap RCurl reshape2 Rlabkey scales]; }; + InPAS = derive2 { name="InPAS"; version="1.4.4"; sha256="0939f6ag20im9n8vq04k2nza1hl32mwm1xr9lyg4kpbq80gyscs4"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.0.4"; sha256="05sa7rrgw7563af9fzy8r1ndhy9f8cd2ymxc9p9fd4xmw1yk31s9"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors SummarizedExperiment]; }; + IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.8.0"; sha256="0sg1fqsblhxynm4yvh5jzkrjw7h7rqi3n5ck5996xd0r5zhyqd1q"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; + JunctionSeq = derive2 { name="JunctionSeq"; version="1.2.4"; sha256="1allsshg9bbl0krx9as31g41px0fvk3hn00vis3saxshq95mcn76"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix S4Vectors statmod stringr SummarizedExperiment]; }; + KCsmart = derive2 { name="KCsmart"; version="2.30.0"; sha256="0fpmjdlnvrcj6s3pnrhvb09hm1ws2nqxw7is7rdx4grq1j21ppgj"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.12.3"; sha256="14p6506ml6l1h2j3pr1hda8475sa4rvph4vc1z3h84bj0czciibz"; depends=[Biostrings httr png]; }; + KEGGgraph = derive2 { name="KEGGgraph"; version="1.30.0"; sha256="14zwnncks3ayb4dwa2i08aqf7abyxcwpd95dag6si8fwhz1di4v9"; depends=[graph XML]; }; + KEGGprofile = derive2 { name="KEGGprofile"; version="1.14.0"; sha256="04997klqr44vi87zasvr41bgjjn2gfa3abv23zqjmj4xqr5693r8"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png TeachingDemos XML]; }; + LBE = derive2 { name="LBE"; version="1.40.0"; sha256="174bwp93lnb1lg19yd1r1piza23zm8wi2mnk3kk0r79hj9y1vx04"; depends=[]; }; + LEA = derive2 { name="LEA"; version="1.4.0"; sha256="1srrabmvb9ghvhi3vqmr348as0vjzqfmcln2lclsc6za5prqnaja"; depends=[]; }; + LMGene = derive2 { name="LMGene"; version="2.28.0"; sha256="0d0nvkcrg8hqrjlhhmcw1194w2aw363xr5dfqv9r10r618x5s5zy"; depends=[affy Biobase multtest survival]; }; + LOLA = derive2 { name="LOLA"; version="1.2.2"; sha256="0fjs5z64s6xd62161qkpb38dblsl9dycw4ij0kggrkrjsfqnnapa"; depends=[BiocGenerics data_table GenomicRanges IRanges S4Vectors]; }; + LPE = derive2 { name="LPE"; version="1.46.0"; sha256="14j8ha907nsj382hx67ci0675n15j7anxg95kz7v4lrd5w6bbb5f"; depends=[]; }; + LPEadj = derive2 { name="LPEadj"; version="1.32.0"; sha256="1lx2p99dyjg1vamglnc2j1qan52wpz2sn9lyzhq9gxh77716rxlj"; depends=[LPE]; }; + LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.22.0"; sha256="0cx9msy13cdihpdl92xz66c9hi5lblmfm113zmd6p7zzpfjzb8rg"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; + LedPred = derive2 { name="LedPred"; version="1.6.1"; sha256="1ryggr2n2rhsxcgxy3rkxhvvjxcmbj8rm274qyzi0i7na4m98jkq"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + Linnorm = derive2 { name="Linnorm"; version="1.0.6"; sha256="1s66vzwyrmxwd3y52nxikcplbl5crvcamr0cfyg5hw5hmhbx4n1g"; depends=[limma MASS Rcpp RcppArmadillo statmod]; }; + LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.26.0"; sha256="04g4rh6digbdymlbbblvscsdvkq6nxnbsc7g5y2zp1afn175wg45"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; + LowMACA = derive2 { name="LowMACA"; version="1.4.2"; sha256="1aj59sxnbxwl5lz9nk18jb6n2da0qr3b3zz2fiw5z5bd8qd06aj1"; depends=[BiocParallel Biostrings cgdsr data_table LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.0.2"; sha256="0gii3d4w8219p8lc4isbkh3y6hhz2mhgr3qb5cm7hq0v10a9w85w"; depends=[circlize data_table dplyr ggplot2 ineq LymphoSeqDB plyr RColorBrewer reshape VennDiagram]; }; + M3D = derive2 { name="M3D"; version="1.6.2"; sha256="0z20kfhx8p8l6c2lh4mhnmp8ib8jcb3ld5h2sw7n5prsd22qs1mv"; depends=[BiocGenerics BiSeq GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + MAIT = derive2 { name="MAIT"; version="1.6.0"; sha256="0qbpdilk9h6sz64p4r18iay9v8kh19y3sgik9h8mmlywfvjl2d36"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; + MANOR = derive2 { name="MANOR"; version="1.44.0"; sha256="1h3ia41anx3bg2nzfa40vjzgrd30aayprlhj2amgiidv37xam7jd"; depends=[GLAD]; }; + MBASED = derive2 { name="MBASED"; version="1.6.0"; sha256="1a69ymyn817qn5xdm1lnc5nf1iir8sshj4awkn2vm7nc5zf0yyw6"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; + MBAmethyl = derive2 { name="MBAmethyl"; version="1.6.0"; sha256="1wjd3v2kj1g7hc39rg5g8npvppyrdp99fvcqiyv7fybpp4i106ws"; depends=[]; }; + MBCB = derive2 { name="MBCB"; version="1.26.0"; sha256="1hv14jmmh8vzispdbww3hpbkb57naxqy7wcy5ilc1kz2sg4a6h30"; depends=[preprocessCore tcltk2]; }; + MBttest = derive2 { name="MBttest"; version="1.0.0"; sha256="1df76rma5j9nc4pzz7ql9zs08hzvsclh8crhrh3pwgidny6i485h"; depends=[gplots gtools]; }; + MCRestimate = derive2 { name="MCRestimate"; version="2.28.0"; sha256="02zlkrkzia1398wxvrqgdhika3v7nnkcy4w6bd0s1c3mzri3br4i"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; + MEAL = derive2 { name="MEAL"; version="1.2.3"; sha256="0jji6c0g6ks13g52v0xdzk97g6ifh2jkphlbwhs1qz930wmzmyk1"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 IRanges limma minfi MultiDataSet permute S4Vectors SNPassoc snpStats sva vegan]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.22.0"; sha256="1c6p2jkx3p8fgxah1qs74ia4934m9cbw8gdmm9kig1sfipmw5rjs"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEDME = derive2 { name="MEDME"; version="1.32.0"; sha256="062dqr4l6fg6azalfl93zrfzj7xnx9fn0l4gbn5gmmvxz5ldqp86"; depends=[Biostrings drc MASS]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.6.0"; sha256="1bmb27ka2d4khghzp8wja5aqh82jlkqsjiqg3vc550k02g9yyf2j"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.6.0"; sha256="1ly89riycn4x92q58jhmdpqpk3y069cpipbajwla59iczjl333qj"; depends=[annotate AnnotationDbi]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.10.2"; sha256="0c82szbvk84h8p4zws8za1lk0hchf2n9p38m9dav8g8p8p2mvm37"; depends=[Biobase coda data_table Formula ggplot2 Kmisc MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.52.0"; sha256="17plgfwj8n4861rpg4a5qlp951v5wsdr6p7xplb2did0hz555lw2"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rgl rpart sfsmisc shiny threejs]; }; + MLP = derive2 { name="MLP"; version="1.20.0"; sha256="0s923x14xdbfqa6vnmsijfw7bifvkj4dpbvkqnnppgdm0n0y42gq"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; + MLSeq = derive2 { name="MLSeq"; version="1.12.2"; sha256="045nbqn369lisnn5b6y1lq4xhzd724dv3b58zcl3mgi3yja3rzq5"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; }; + MMDiff = derive2 { name="MMDiff"; version="1.12.0"; sha256="11gzg1qshfrhf7m7w60pqfndpq9xbjns1kzq83fhmg3xydw8byb5"; depends=[Biobase DiffBind GenomicRanges GMD IRanges Rsamtools]; }; + MMDiff2 = derive2 { name="MMDiff2"; version="1.0.2"; sha256="05nnk927h0bywcwkqasyhb6zq8iky18bcjhiavmjbm6rs44x8r38"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; + MPFE = derive2 { name="MPFE"; version="1.8.0"; sha256="0ipsvsan3z0z7ax94fg7vmmzyhzh9184nd0k1b26sr0ddqk36n8k"; depends=[]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.6.2"; sha256="1b7bv47avxhvnr0ilbsfmr2yg6q3k5m62qkmxn9fapar0c7w6my1"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.6.2"; sha256="04jqff48h48s7kwhai76y1y80hwgpw8x5svl0xzb6qvqwz12lsc9"; depends=[mzID]; }; + MSnID = derive2 { name="MSnID"; version="1.6.0"; sha256="0xgqq5gx9jgk0hflbmwsbp9l3652mm2l0jkyanxqbwn5ys6k9l2n"; depends=[Biobase data_table doParallel foreach iterators MSnbase mzID ProtGenerics R_cache Rcpp reshape2]; }; + MSnbase = derive2 { name="MSnbase"; version="1.20.7"; sha256="0540ha72mkd9paylq5qzpcxw63d6b4rzjplg2rdixzzdhfg5rcgc"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp reshape2 S4Vectors vsn]; }; + MSstats = derive2 { name="MSstats"; version="3.4.0"; sha256="0fkdfvd0fm5p5x5a23n2hnysawl6idwni0ib1a4ckdgx9mb183dm"; depends=[data_table ggplot2 ggrepel gplots limma lme4 marray minpack_lm MSnbase preprocessCore Rcpp reshape reshape2 survival]; }; + MVCClass = derive2 { name="MVCClass"; version="1.46.0"; sha256="1aa63zn86m9nc3pr9y4rnzh5irfmkqkxbgbx5qf87x0rxnl7b8c2"; depends=[]; }; + MantelCorr = derive2 { name="MantelCorr"; version="1.42.0"; sha256="1123cvr1psl5hvin8fw3zx3rp0317pfs7jzliyl1namkyz86nmyy"; depends=[]; }; + MassArray = derive2 { name="MassArray"; version="1.24.0"; sha256="1ijrsgfzfqg4knvfdd2jlhzc0d58q90phwjkfklxq416r68za7sh"; depends=[]; }; + MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.38.0"; sha256="0xyilbr0qcli8qkj5nj3zydgpbx6xlqf9877vyyb471isd0h764p"; depends=[waveslim]; }; + MatrixRider = derive2 { name="MatrixRider"; version="1.4.0"; sha256="1f114p00splb8rkz0s4l44m16xf4i00ig6h56jvca3i9knhv9g4p"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.8.0"; sha256="1jf4jx7cybivlasmlsn369fwcjv4jyid0i5p7aj5hqs9cb48kzfz"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MeSHSim = derive2 { name="MeSHSim"; version="1.4.0"; sha256="1dgvpqfg41kawmdy9vag6ysm3iwkfijc48blw6rr5pbjmx75f3wg"; depends=[RCurl XML]; }; + MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.44.0"; sha256="1snrpm5dx9rwb2i7g0y6q80cdjmmw5pcybifq3z1li86i5w1llic"; depends=[]; }; + MergeMaid = derive2 { name="MergeMaid"; version="2.44.0"; sha256="1dblfravkmvjcwmd9c9c5gzl68ygczsvpydcz6n2qjfnvv2qz3cq"; depends=[Biobase MASS survival]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.0.0"; sha256="01fz5ms2giwj18irr2rdm98hzg0hscai9zi3zwyqmkjwpifz845g"; depends=[]; }; + Metab = derive2 { name="Metab"; version="1.6.0"; sha256="0v6003ra26lm7gcadlc8ijn3lfiqrbc3i3bqwfmgsrd477kb3ppg"; depends=[pander svDialogs xcms]; }; + MethPed = derive2 { name="MethPed"; version="1.0.2"; sha256="0ijvk0pmjgr0x12hv12p7lbvarlaz5pg7nc2nly8hh7hmv8y807p"; depends=[Biobase randomForest]; }; + MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.4.0"; sha256="19yws0346kia30p4sjmikbsvzfynl920n8ici3wpmcks2vs1a1xd"; depends=[Biostrings gplots seqinr stringr]; }; + MethylAid = derive2 { name="MethylAid"; version="1.6.2"; sha256="1ih9s9jmixfa1h060y7sqmip1rwz32a445cfjhcff20bsjblld42"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny]; }; + MethylMix = derive2 { name="MethylMix"; version="1.6.0"; sha256="0waq027d51gnz6l883dph2srklzf3d1fwlan3khzcmi8yq75ciar"; depends=[doParallel foreach optimx RColorBrewer RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.12.0"; sha256="1x6kc2xl2jf8f6r2yjpybh51kk75xhmpb7m9j1zs1hzi0aqd0rz4"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + Mfuzz = derive2 { name="Mfuzz"; version="2.32.0"; sha256="17afgpshz7nb0kcdks19z6izb6hrmgy9rigzw3mvk488mxhczlw8"; depends=[Biobase e1071 tkWidgets]; }; + MiChip = derive2 { name="MiChip"; version="1.26.0"; sha256="0fddfvay8zjamb6gzmf6f6xvqjh163ss3wikf1a04ihj7if8x6nf"; depends=[Biobase]; }; + MiPP = derive2 { name="MiPP"; version="1.44.0"; sha256="0ffiyrkda0hwjg4l062kxx5rrp57q2f716gk6n3f8dicx938fc4d"; depends=[Biobase e1071 MASS]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.14.0"; sha256="02x8p9l48g0b7s2pjq5j3w4dxnr6r0495di1y7sknrsbc2gdczib"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; }; + MineICA = derive2 { name="MineICA"; version="1.12.0"; sha256="0155kj48kxajd4sg1ajvppk1jss1wqkkyjz6xhzr3xpl9g2jnh51"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.16.0"; sha256="1yw8ym00bkvn955d8yrz068yxszy3jv7gh55z3357k9spf1r9kmi"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; + Mirsynergy = derive2 { name="Mirsynergy"; version="1.8.1"; sha256="1zs09wm9n51d1bswbl6q9xmd5kb9rgbjgmqniq4nril18cqksqnp"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; + MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.22.0"; sha256="05fnam7yak4jxjwmkzmczwrfvbqw7y91layz6g7kgzz56ifqj33s"; depends=[Biobase lattice limma statmod vsn xtable]; }; + MoPS = derive2 { name="MoPS"; version="1.6.0"; sha256="19bkydam974lam2v7ljzmj6xs8hw5ggd839j5mld1in44q7p8y3h"; depends=[Biobase]; }; + MotIV = derive2 { name="MotIV"; version="1.28.0"; sha256="1yzx1m1csi9x8i0jljcqla3hgwly3yb9r710q23f5kswir3qdawn"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; + MotifDb = derive2 { name="MotifDb"; version="1.14.0"; sha256="05pbqrq547am6l74cv3pqnlw6kiasnlfx9hgicfp290ir6ws0clx"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors]; }; + Mulcom = derive2 { name="Mulcom"; version="1.22.0"; sha256="08h94yykypmm5zshmf0i547g6lw4bsyn5zw8swgpiv4c2p46drhd"; depends=[Biobase fields]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.0.2"; sha256="05gx3kdzrc1lyw2xx1w2vw0c562x7cj3raqi6mafs40dlxyplf0h"; depends=[Biobase BiocGenerics GenomicRanges IRanges minfi S4Vectors SummarizedExperiment]; }; + MultiMed = derive2 { name="MultiMed"; version="1.6.0"; sha256="1shl11v2m926c2ccypj561rb17h490bndw2nflcpg19bgw43smj6"; depends=[]; }; + NCIgraph = derive2 { name="NCIgraph"; version="1.20.0"; sha256="08kjg6ynynbccdi57hns1bxnr9cjh07w71rah8zkx2irsgg22485"; depends=[graph KEGGgraph R_methodsS3 RBGL RCytoscape]; }; + NGScopy = derive2 { name="NGScopy"; version="1.6.0"; sha256="07hrqv4xdsi2w3ln4lbjgfkyqv22m9nj9zwcaxdxhy8sr3dr7zzw"; depends=[changepoint rbamtools Xmisc]; }; + NOISeq = derive2 { name="NOISeq"; version="2.16.0"; sha256="0j2698rsdbm76rcdc9b1ddhrs7ka0qwi51p8cqzcymkjks4pb4jh"; depends=[Biobase Matrix]; }; + NTW = derive2 { name="NTW"; version="1.22.0"; sha256="094lwailsdl889h880igkwmg1vkbs4k44m5l9zdncy2d4cbmz9fx"; depends=[mvtnorm]; }; + NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.2.0"; sha256="00bw33qa0szb0g46ni35jaxk848pbfqcy5z7jv3sbfc3kfv2qzki"; depends=[Biobase matrixStats]; }; + NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.4.0"; sha256="1y68zx0psvnyfxbslw59spdv054shrfj3m8l30f13x734ff2bcd2"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; + NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.16.0"; sha256="08x5hv0qpkg241pxzgfs5pbs5vmf7bj36hdhr1iakmqic3p88xaf"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.8.0"; sha256="1brr77b0gj4mbfcxiwk0ip11shj1829i12ivwjhls2f2iwn72s4b"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.12.0"; sha256="16hcg60fnqznjj218ms3i9yz8sw9r5fgbcbg7m6fbqdf9wvblbdn"; depends=[graph igraph seriation]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.18.0"; sha256="1h2x08ns8q4fr26mk3sqn65rqb3j6i7a0ni3fasbjsbc6yhbi2lf"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NuPoP = derive2 { name="NuPoP"; version="1.22.0"; sha256="0q0qh9xwlz6flhqzvmc438h0ywj66y794mzlqyjm648qc33csd2x"; depends=[]; }; + OCplus = derive2 { name="OCplus"; version="1.46.0"; sha256="1qib8knxymmdy0a7afmjg1zvrpb4nx1mkdc53zpdicjrv1k64v6h"; depends=[akima multtest]; }; + OGSA = derive2 { name="OGSA"; version="1.2.0"; sha256="17cc03pv4lgs7306mhwd62hnkl74gvqpaw71rk8sas2iy0rd2xnf"; depends=[Biobase gplots limma]; }; + OLIN = derive2 { name="OLIN"; version="1.50.0"; sha256="0a4ahksrng4bvcslx7mw6q3gf6wlgkskqigk1axaxa6jy6jyg70c"; depends=[limma locfit marray]; }; + OLINgui = derive2 { name="OLINgui"; version="1.46.0"; sha256="1vdkxkbwxf42fp9y24xqd598ksif4najbp77s689qr2hbi3mw0rp"; depends=[marray OLIN tkWidgets widgetTools]; }; + OSAT = derive2 { name="OSAT"; version="1.20.0"; sha256="0hccp457gqb2c1qs9jlwglvhm8dqazxgk3qj6cidh9wmdd97ppcw"; depends=[]; }; + OTUbase = derive2 { name="OTUbase"; version="1.22.0"; sha256="0i14424m00ivvssb9qax48dxk2pm68hkwykd1xqpl38p0p4d1fh5"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; + OmicCircos = derive2 { name="OmicCircos"; version="1.10.0"; sha256="0s55hrr712z15v0svrijgr0gvn5r8c39jyff0ihl7wyddvyky982"; depends=[GenomicRanges]; }; + OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.4.2"; sha256="05vjkr2gaa1w8lnrxpmqnf1a89clwlzjq4vb9nxmjk21gp6dgqf8"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; + OncoScore = derive2 { name="OncoScore"; version="1.0.2"; sha256="1wynyfc76vz1qinfvbyzgawcwwyic1khdsmjqkr2b8mcs3sb97xs"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="2.2.2"; sha256="06i2scrv2dh5yhpaf2dnhjmmdknm0x06597baxk85k95q1m4zpg2"; depends=[data_table graph gtools igraph RColorBrewer Rcpp Rgraphviz]; }; + OperaMate = derive2 { name="OperaMate"; version="1.4.0"; sha256="0qn2r3347khd671yf200p2wfbqysi2k4wk0y52vr1kji39shjqy4"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; }; + OrderedList = derive2 { name="OrderedList"; version="1.44.0"; sha256="0z32bp9gjy0sf7qw626p2dignrcq22h6l5zwza2ap5c0hr0m7l2r"; depends=[Biobase twilight]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.14.1"; sha256="0h48qkliiyl4fk1dnk2310gy76bj7nhgnw92cxllvbcq4caakv52"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller GenomicFeatures GenomicRanges graph IRanges RBGL RSQLite S4Vectors]; }; + Oscope = derive2 { name="Oscope"; version="1.2.0"; sha256="0p9ri0djqf87jbb6pcjz5m8l0vgjc04mspdahqaj258yg2zgkvdp"; depends=[BiocParallel cluster EBSeq testthat]; }; + OutlierD = derive2 { name="OutlierD"; version="1.36.0"; sha256="1carw9ylv7gwcawfdpx3aahbw1hnglila3miry5vhg978lk662f2"; depends=[Biobase quantreg]; }; + PAA = derive2 { name="PAA"; version="1.7.1"; sha256="1kgqb4q6jmr34w7pkgksbzbhvvlyr57xgv7k17hibggy0b1ykp1j"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PADOG = derive2 { name="PADOG"; version="1.14.0"; sha256="1s1adlswz3na5k072nbsp419ix75jg4h94jgg1w54730dymphasm"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; + PANR = derive2 { name="PANR"; version="1.18.0"; sha256="1b4r8bz22rfykysbp2cfxa98gq2hsig8nx2kfizx5z7z28gnsfba"; depends=[igraph MASS pvclust RedeR]; }; + PAPi = derive2 { name="PAPi"; version="1.12.0"; sha256="1dvhghn0g7ka2qvfyj785ma6pm25p7j8j76cqwjhg9n8kja9999i"; depends=[KEGGREST svDialogs]; }; + PAnnBuilder = derive2 { name="PAnnBuilder"; version="1.36.0"; sha256="1s2b0s5pb2yhji756y21sy22sypvp3zkmdg7jv7xnsrrnvkqjnqd"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + PCAN = derive2 { name="PCAN"; version="1.0.2"; sha256="1rkgkash3y07srq2y5r0hrhs8gzzwn739g5jhjdmky73m7xbdc3p"; depends=[BiocParallel]; }; + PCpheno = derive2 { name="PCpheno"; version="1.34.0"; sha256="0y93qv6gghr461rqbq11vl0khf25n6pvrqzszybwbrw9q6hynzhw"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; + PECA = derive2 { name="PECA"; version="1.8.0"; sha256="0qm40zwmbzj06z18k8wyqvlk6rvv70h7m8g4zrrslsjdx8anhzll"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; + PGA = derive2 { name="PGA"; version="1.2.2"; sha256="13a4q8dldyp2djc2f33w8kj6vpaa7xzymf3p1l47mmv6gz9n17yv"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; + PGSEA = derive2 { name="PGSEA"; version="1.46.0"; sha256="1sx7ffg0sjzs9hxh1fhp0149h6j4fhaqqrq56aanmacqpcd8lhna"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; + PICS = derive2 { name="PICS"; version="2.16.0"; sha256="0gn1dqmhii2ys95gs85sm812kgw2pnph7mv6yml0xg0929rph3pa"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; + PING = derive2 { name="PING"; version="2.16.0"; sha256="13yhwmcvhcvn99x6czq09zhrqaw0p644iw3jhw2gv3r93q39blci"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; + PLPE = derive2 { name="PLPE"; version="1.32.0"; sha256="0i114wl9w4ka7w8w1jllfcq436mgpjkxaaymbxn81kfjw3jp4pql"; depends=[Biobase LPE MASS]; }; + PREDA = derive2 { name="PREDA"; version="1.18.0"; sha256="10bnsf62vlxzymwlh683g0asmkwldgr66fwfxhdlk807lh4phi8k"; depends=[annotate Biobase lokern multtest]; }; + PROMISE = derive2 { name="PROMISE"; version="1.24.0"; sha256="04wd1s0ki10scspd48h2m0y5wzxab2q6jd8farnca62sr7nzz46x"; depends=[Biobase GSEABase]; }; + PROPER = derive2 { name="PROPER"; version="1.4.2"; sha256="1pqa3k4id6j1j8nwrp4ax3fbpxc9vhkyddy9vylg0s6l5c3jnqkh"; depends=[edgeR]; }; + PROcess = derive2 { name="PROcess"; version="1.48.0"; sha256="0dna1smq8phmm2xd4928wbr2y9a4l3yv98ss8ida1fxmbxhy3sxy"; depends=[Icens]; }; + PSEA = derive2 { name="PSEA"; version="1.6.0"; sha256="07bsdx8vclk2mjpq65zqgzx8l9pb31vj00j1qi3krk2gjb64pj1j"; depends=[Biobase MASS]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.10.0"; sha256="1psivm4zlg0nidg0kzy61m0my0y8pdjwprlyzcidbjqal1s8mpzc"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PWMEnrich = derive2 { name="PWMEnrich"; version="4.8.2"; sha256="1afyrrqdxacnnx1r0pzqp1nhbjrb0wqaamycvxmap9x0nq96a6ww"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; + PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.0.3"; sha256="0n3i9385zq09jqwp81q869h5qk4xjnrnx7mlcsyng087h2sgnmvh"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; + Path2PPI = derive2 { name="Path2PPI"; version="1.2.2"; sha256="00cbchrvqwxdv777f3rbgdqj127wi5383gk7j0amxvdx9xrkjyp1"; depends=[igraph]; }; + PathNet = derive2 { name="PathNet"; version="1.12.0"; sha256="12wv9izq6hk27v2x8dv7mfvp9s51jyjydwdd2vb44a6d1pz8fn94"; depends=[]; }; + Pbase = derive2 { name="Pbase"; version="0.12.2"; sha256="1cl9j8s5hxib5wzj42rbp747ckbidni5dii6qxylp89msvp1wlia"; depends=[Biobase BiocGenerics biomaRt Biostrings cleaver GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; + PhenStat = derive2 { name="PhenStat"; version="2.6.0"; sha256="0f69r7qg6cbpmlrbcz8ddmcfkzx5bixry0nksmkfbf6hbw08pgn1"; depends=[car logistf MASS nlme nortest]; }; + Polyfit = derive2 { name="Polyfit"; version="1.6.0"; sha256="1szx61apdn014496qzr5aqzy9nfyvnbhc7w949kxmw1vrgjkrdmc"; depends=[DESeq]; }; + Prize = derive2 { name="Prize"; version="1.2.0"; sha256="0birhqvk5myb1j41hffy71dmshc43vfx5qd9rnpwylq66dp9f9f9"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; + ProCoNA = derive2 { name="ProCoNA"; version="1.10.0"; sha256="0hh21hdhgaf63mbbfi5pnpds2bgkybnr1xrc0w2siqnyfvva1613"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; + Prostar = derive2 { name="Prostar"; version="1.4.12"; sha256="0720rlql0wq9spxrr438gsjn3xd7hci6vssdxa1mqq1p8xcv12ik"; depends=[DAPAR DAPARdata data_table DT rhandsontable shiny shinyAce shinyjs]; }; + ProtGenerics = derive2 { name="ProtGenerics"; version="1.4.0"; sha256="15n8ykfwh8zng8px25qybskwcr627xwap3wzz3qs8g9mgxk69avn"; depends=[]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.2.2"; sha256="1z5708sh0ar98xyrj3xpl87pn9zwj19wa2yq30kspp84kl924dz4"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PureCN = derive2 { name="PureCN"; version="1.0.4"; sha256="1nprrvr5mfccji6iw7cfwvi1d087nxa43l30lvi0fkqnaw5ba7x2"; depends=[data_table DNAcopy GenomeInfoDb GenomicRanges IRanges RColorBrewer S4Vectors SummarizedExperiment VariantAnnotation]; }; + Pviz = derive2 { name="Pviz"; version="1.6.2"; sha256="1kqamr8ir84jy6ija3y3v99wadrfajwycwb687x9l219a0l8h5k4"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; + QDNAseq = derive2 { name="QDNAseq"; version="1.8.1"; sha256="1r9j3324qc3r597gry39jbkvzhwgmsqkn8ss5z78k84b97n7raz9"; depends=[Biobase CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QUALIFIER = derive2 { name="QUALIFIER"; version="1.16.1"; sha256="00303dl9sypzl2zii1jyjmjvcmq4ff5qqy5i4aavzq1d82slf5g4"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; + QUBIC = derive2 { name="QUBIC"; version="1.0.3"; sha256="12qrk97m42ifqj6mk8alrhr4pxqddb2ca23raf528hxphc6z7hml"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.4.0"; sha256="1gw79h59xl45k89hj2d3l964y7w61svwlyjibz17z1r2pxc9vzj1"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.12.0"; sha256="15f9xqvhf7c57l12xapm4jfm32np0y8lgi31vp44dwz281gxh61q"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.0.2"; sha256="152iby14x0xx8h05c1c5wqk6ndv38hl3zzwj7iiw9m2apbfms9fs"; depends=[Rcpp]; }; + R3CPET = derive2 { name="R3CPET"; version="1.4.2"; sha256="1cv4dxlvxdbcynm49syajhlrk9vak54v6gmljsbry0g6hjiyfiv1"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.22.0"; sha256="11clxpbkzkvjrj6s0415285ajjziymmn5hgz61n61sjxm08al6qj"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; + R4RNA = derive2 { name="R4RNA"; version="1.0.0"; sha256="0v6sl6xxnwkkkvs2j496kv9hqk7f5lbgpgk39fz2pyvxysccwi5y"; depends=[Biostrings]; }; + RBGL = derive2 { name="RBGL"; version="1.48.1"; sha256="1k82zcbyfx3p9hc8r0hwq73krbhakjan8fgbfr6w8z2crfkv3zmz"; depends=[graph]; }; + RBM = derive2 { name="RBM"; version="1.4.0"; sha256="0a17l6wmlqimb3jlh5i4qjyyhkymv4mcdhjbkis2qrf4zx6yn428"; depends=[limma marray]; }; + RBioinf = derive2 { name="RBioinf"; version="1.32.0"; sha256="0yvbvhcydsqx2c4vmdbgcsccn71yswci82xb2qcjbps4z1q31g4x"; depends=[graph]; }; + RCASPAR = derive2 { name="RCASPAR"; version="1.18.0"; sha256="15har8sa0drdjn033fia2gny1iacb5q06h2hr36k6hqr42y33p07"; depends=[]; }; + RCy3 = derive2 { name="RCy3"; version="1.2.0"; sha256="020j4ay8r4rsbwpc9bjgw96hwp4m4q4rg078grg9scqfz9jjpksw"; depends=[graph httr RCurl RJSONIO]; }; + RCyjs = derive2 { name="RCyjs"; version="1.4.0"; sha256="10d55bjav4fshn92fiif63fb17b58wsbg39fxslcyg5hl2wa8vhl"; depends=[BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; }; + RCytoscape = derive2 { name="RCytoscape"; version="1.21.1"; sha256="0jr3wlqk8aghaxdpq9a9z7gp7hmdfgmzkflv561p9g6yawv3v1q2"; depends=[BiocGenerics graph]; }; + RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.10.0"; sha256="1ly2xfmq3vwp2zxjqlmsjfy415h3zf6hhb71blf56g0naws7j5xh"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; + RDRToolbox = derive2 { name="RDRToolbox"; version="1.22.0"; sha256="1p2c7l16q9lyiki1a6vq076r9crjqpr6pgjckhpcis9p9gh5gapy"; depends=[MASS rgl]; }; + REDseq = derive2 { name="REDseq"; version="1.18.0"; sha256="14f2vh1s16dmar21h673qx8ypq5rbajazvmw6iw0bvxzbk6fy7f6"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; + RGSEA = derive2 { name="RGSEA"; version="1.6.2"; sha256="1y5qfcspj0l1ckfqlyy0dhl3aaach2mhk8bkqyx4qr68rh496y3s"; depends=[BiocGenerics]; }; + RGalaxy = derive2 { name="RGalaxy"; version="1.16.2"; sha256="03ippdid60iql6dlc5c7f2njfjfs7ssgfs8gl1p8kmrg4c4hd3p0"; depends=[Biobase BiocGenerics digest optparse roxygen2 XML]; }; + RGraph2js = derive2 { name="RGraph2js"; version="1.0.0"; sha256="0mhj021nczpf6ji5297zx0k7kc7503i2w5z9js5irlj5d6552700"; depends=[digest graph rjson whisker]; }; + RIPSeeker = derive2 { name="RIPSeeker"; version="1.12.0"; sha256="1dymn67l2d6165misxh4p6j8cwlydkh75j77pxx5wdnr2x2nfkcb"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + RImmPort = derive2 { name="RImmPort"; version="1.0.2"; sha256="0278fgq6b9jl5qy2nf6r1qijcrwkzyi6wpx1hq0021k3m1q2sl0b"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RLMM = derive2 { name="RLMM"; version="1.34.0"; sha256="0inyvbr5khwf24j7wdnn6x0b8zqcqf11jm5jqn6lgyxwljl5j0lq"; depends=[MASS]; }; + RMassBank = derive2 { name="RMassBank"; version="2.0.0"; sha256="0b0aghrr1s9izk7bsxj6qr2gdavxpyjk5ks7zbnqdjwc95hprndv"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; + RNASeqPower = derive2 { name="RNASeqPower"; version="1.12.0"; sha256="0y5cgdcj4wn3j9pxyv0hsjpbsc7ahl2a19mj6agjf8l4hn3wg3ky"; depends=[]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.20.0"; sha256="0a33sr1iqsym990d76rhrxpmcf0g0zzg7waidc5i608496kx3012"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNAither = derive2 { name="RNAither"; version="2.20.0"; sha256="0a4h1wmr158wmm477pbn2jkn5hcfj0w5dxi071shbv26b88lvfgg"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; + RNAprobR = derive2 { name="RNAprobR"; version="1.4.0"; sha256="08cp1ycx6h9h7df58v84x5l7a3b2as27hap4jd37frvhy8bwkkay"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges plyr Rsamtools rtracklayer]; }; + ROC = derive2 { name="ROC"; version="1.48.0"; sha256="01n66xmy2wsh2m7vxvlnvh5n40cfnqngsgzywnx5ywbq3g570328"; depends=[]; }; + ROTS = derive2 { name="ROTS"; version="1.0.0"; sha256="1s48zavs9w3swn3q0hjq6rnld28hd8jsbqq1jr38dd4rmh1mxgxr"; depends=[Biobase Rcpp]; }; + ROntoTools = derive2 { name="ROntoTools"; version="2.0.0"; sha256="0rmi1f8nr1ks5mwqmriqyh025qzs7j8a5fmfk7y3kb9wm5is7dm7"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; + RPA = derive2 { name="RPA"; version="1.28.0"; sha256="08cj1li41vgxg61bgbv5gw6fnqsc1hgsm6xl3yldpy33rl3q0sg2"; depends=[affy BiocGenerics phyloseq]; }; + RRHO = derive2 { name="RRHO"; version="1.12.0"; sha256="0vv4lxavgm1jfj2lvm7j589cbnd23mp77jfwacaswgz8q3s7l936"; depends=[VennDiagram]; }; + RSVSim = derive2 { name="RSVSim"; version="1.12.0"; sha256="1pbsp2an6y4mgcwcsc25v6v68yn8fxpkn4anmx6rmhpdl2dvwpzc"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; + RTCA = derive2 { name="RTCA"; version="1.24.0"; sha256="0q7cfkhayir6a437q7glyk536jhlq61kpapsrh6kvl0m5jcknai8"; depends=[Biobase gtools RColorBrewer]; }; + RTCGA = derive2 { name="RTCGA"; version="1.2.5"; sha256="112xmvk4cx6y4ma9kmrl6yryadml3mwd1i2924gbj1xy3wk0p0f2"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.2.2"; sha256="0gfhvzswjdlxpy6i7bhni39a5qvqdkdqiwrm411g2mx38zicgnxm"; depends=[data_table limma RCircos RCurl RJSONIO survival XML]; }; + RTN = derive2 { name="RTN"; version="1.10.0"; sha256="14dixlh8fr7kjzf6jrgcr7qhqpdbwl5r76c78mzqig5lzba3s0gy"; depends=[car data_table ff igraph IRanges limma minet RedeR snow]; }; + RTopper = derive2 { name="RTopper"; version="1.18.0"; sha256="0bmgyn74h0i2jbqw470l3ffv6lv7iwqilgb2zx6zh1f0gsy11km9"; depends=[Biobase limma multtest]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.6.2"; sha256="0kwgf512gld4vdmygwps0zqlas936fg05b573xvhag88rcdx8b5b"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVcorr = derive2 { name="RUVcorr"; version="1.4.2"; sha256="0japqgx5jvava36hsc3jjx5x762ayhsklnn7m242wb77k97qwi4p"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; + RUVnormalize = derive2 { name="RUVnormalize"; version="1.6.0"; sha256="0pnx0zxacwi5qbm4cy83da60r306phzc9j8sib2n166g9wpqiypw"; depends=[Biobase RUVnormalizeData]; }; + RWebServices = derive2 { name="RWebServices"; version="1.36.0"; sha256="03x97qwv3nryazz4d3g70lfs6la2v79favlgskbr3x3ajjc2n0cg"; depends=[RCurl SJava TypeInfo]; }; + RamiGO = derive2 { name="RamiGO"; version="1.18.0"; sha256="0rq2xvb4gpcj5daczrj2if7v3kzs00kkvsa7kb78v37vvhif4rh8"; depends=[graph gsubfn igraph png RCurl RCytoscape]; }; + RankProd = derive2 { name="RankProd"; version="2.44.0"; sha256="1vyghlm4a1wvq6mcw7ls0jnwf0q64730zvvycjb34x38v18wml3y"; depends=[]; }; + RareVariantVis = derive2 { name="RareVariantVis"; version="1.6.2"; sha256="1ia1gdaw8n3v091yp1hsgy6i2dcshcm179vnm3q40ip05mm9yshz"; depends=[BiocGenerics GenomeInfoDb GenomicRanges googleVis IRanges S4Vectors VariantAnnotation]; }; + Rariant = derive2 { name="Rariant"; version="1.8.3"; sha256="0cnqrl8n9piyzbrxpk22nqkkmrnnz7vrhpbg20i6sfyp34353gzj"; depends=[dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; + RbcBook1 = derive2 { name="RbcBook1"; version="1.40.0"; sha256="19cwhsshw9fgq933cgrr9j31n9nf85jjix7ykdcs43rbfryzy99s"; depends=[Biobase graph rpart]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.12.0"; sha256="1gpjc4h11g4c0v2g6fpf1kjyws93i7w1slh12gwpn4hfbha1vsp2"; depends=[]; }; + Rcade = derive2 { name="Rcade"; version="1.14.0"; sha256="0z2rd8g9dbw2q48jmw0d25qrq4x47n708kryp5r7ssb78jmvk7nc"; depends=[baySeq GenomicRanges plotrix rgl Rsamtools S4Vectors]; }; + Rchemcpp = derive2 { name="Rchemcpp"; version="2.10.0"; sha256="1i4fm7ybclj5c87azqv2kjijq28wklrhs3vclyjfk5wapf6kfj5d"; depends=[ChemmineR Rcpp]; }; + RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.12.0"; sha256="1vkfsjl0krp69vhg5riq0bnlmij1qg8xbip5sd2m48z13qwysv6b"; depends=[flowType graph Rgraphviz sfsmisc]; }; + Rcpi = derive2 { name="Rcpi"; version="1.8.0"; sha256="0zx2x5zzx8n4ixyqk5h9sbd48nx3y68cknjpmby8j06csdzjdcc1"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + Rdisop = derive2 { name="Rdisop"; version="1.32.0"; sha256="1x8sdgksx4wh3kdapfmlgq312ip3a8lwi4diafgjkzjyb3rpqwgd"; depends=[Rcpp RcppClassic]; }; + ReQON = derive2 { name="ReQON"; version="1.18.0"; sha256="0kx7mz8m4siygdg1saq1xk9n4qxpz6ymsm6hf3d566sn3ldb97dr"; depends=[rJava Rsamtools seqbias]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.16.2"; sha256="1rd58nfkbjkryg5z2if9g2lck3da65bbr4pkph3wnlhxdn1i5q9l"; depends=[AnnotationDbi DOSE GOSemSim graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.18.0"; sha256="11hzn2lvgjys8jj5y6999s90jngmj8gnnq7cywql0l6dg7y4mjgq"; depends=[affy Biobase]; }; + RedeR = derive2 { name="RedeR"; version="1.20.0"; sha256="1gy2i8kkakv89d335cj0agdbdbrrcaaz5ykpgh46aphag2z2z3fw"; depends=[igraph pvclust RCurl XML]; }; + RefNet = derive2 { name="RefNet"; version="1.8.0"; sha256="0wc93cq5g9x7ah925k7jcz4cnlpccfkrzq4l3ahzxc338xyrsj5j"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; + RefPlus = derive2 { name="RefPlus"; version="1.42.0"; sha256="18pnia63wxqanc8v2ljlhvxiff0l9dshfm68rq5kwlhzmihxdz9q"; depends=[affy affyPLM Biobase preprocessCore]; }; + Repitools = derive2 { name="Repitools"; version="1.18.3"; sha256="0h1sm6jq0kn1ahkj9k8xlj9smb8j63d482wvknmx8j3xn3qmjg1r"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; + ReportingTools = derive2 { name="ReportingTools"; version="2.12.2"; sha256="04acgb7gqf6p0dgimi5sm54kwppclamayfk8m7373bjnzd25m88w"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.16.0"; sha256="0zspfl87qz60hlnc6hcbd2sjjc9fgcq72zd75wnmf20h7ry1ngd7"; depends=[graph]; }; + Rhtslib = derive2 { name="Rhtslib"; version="1.4.3"; sha256="1wgpn9x8abjj7fc087pdavqc3fz0pl5xdh231mgjila18irwlhb3"; depends=[zlibbioc]; }; + RiboProfiling = derive2 { name="RiboProfiling"; version="1.2.1"; sha256="18s35h70isvy6q4psa5j04x7w0srvd3rlslzvkmb0qs2m2x786mz"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; + Ringo = derive2 { name="Ringo"; version="1.36.0"; sha256="18rbl1mvhmh31wvlvh1mjcmy4r7688alzzg0hjswvs8dmb66pr86"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Risa = derive2 { name="Risa"; version="1.14.0"; sha256="0lss7cx84f2sm4r6g1r3m8qpv0ml5y0mkgdbigx49676d8hir9d8"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Rmagpie = derive2 { name="Rmagpie"; version="1.28.0"; sha256="19hvhrbzca631n4jz88k52zlaxj21lpcfcz6gdwqiibpa8p0hqhd"; depends=[Biobase e1071 kernlab pamr]; }; + RmiR = derive2 { name="RmiR"; version="1.28.0"; sha256="10bbwcwssidad2lvk25nm9n40dgmklj7k5m7fps61ny1my4bmbhs"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; + RnBeads = derive2 { name="RnBeads"; version="1.4.0"; sha256="0jmlcjxiri356ykg6dm0cxbmh85kljq8m3cndrfqc1wdj3jg3my3"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr RColorBrewer S4Vectors]; }; + RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.4.2"; sha256="1jrf22a8f5g8scpaqwyp62hlpkfa9cm9y8ifqzz6fkr319i892yy"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; + Rnits = derive2 { name="Rnits"; version="1.6.2"; sha256="1h1g3wqrcsgmixs8bqbray6p0zknfh2gr47dxlwcmlb6gacwzkra"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; + Roleswitch = derive2 { name="Roleswitch"; version="1.10.0"; sha256="1vfywgjnk0dgr47brpalcg8dwgway5lkc4b320mxrpjvkfa9nh60"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; + Rolexa = derive2 { name="Rolexa"; version="1.27.0"; sha256="002bsgk5b7zkxzf26wj53k5qjfjqn55fy3qfaql6xa78yb8kzfad"; depends=[Biostrings IRanges mclust ShortRead]; }; + RpsiXML = derive2 { name="RpsiXML"; version="2.14.0"; sha256="018l540g50nsnqwazpkla2sqf2zvsnlp4ps6j7rly2cl3qay2kzn"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; + Rqc = derive2 { name="Rqc"; version="1.6.2"; sha256="0jm2ib52fjy13lh31xm8fn0z2rkx8sld7zykhjj2ci8514hqcczm"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="1.24.0"; sha256="0w0drs8cpk8nlazq64ag7nm1w5jd1m8riialivm01hz5zcra7scb"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="1.22.3"; sha256="0p7d542gbk5d9pqlyhvqmapfqbay2cgdrs83dvyq0fbg98nzf32l"; depends=[]; }; + Rtreemix = derive2 { name="Rtreemix"; version="1.34.0"; sha256="0xxkii2fmkphxj478ykdym1z09asz28cyzg8r7h6f4adns2rby7h"; depends=[Biobase graph Hmisc]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.10.3"; sha256="09lrvy3d5q58hsgw9as4hyyx07k1vyy2zjn3xsvhyfd97yk6w6lv"; depends=[BiocGenerics]; }; + SAGx = derive2 { name="SAGx"; version="1.46.0"; sha256="1rp190n21p5cav07rkm400al354b4wwqicz3nk095jdrjw6d5pcx"; depends=[Biobase multtest]; }; + SANTA = derive2 { name="SANTA"; version="2.10.2"; sha256="19v4kvfsj6zqv18q1hhl1r0ngkxd3b18h19mbpd4p0chzrfzj36d"; depends=[igraph Matrix snow]; }; + SBMLR = derive2 { name="SBMLR"; version="1.68.0"; sha256="0xamsiq5dqmb2l52ckzbra5q072s5y1xbg6983fp9626mns350ry"; depends=[deSolve XML]; }; + SC3 = derive2 { name="SC3"; version="1.1.4"; sha256="1laxigz5141s877f22dkw4r0icq282s2s4wxlaapdnyg062m2qic"; depends=[cluster colorspace doParallel doRNG e1071 foreach ggplot2 pheatmap RColorBrewer robustbase ROCR rrcov RSelenium Rtsne shiny WriteXLS]; }; + SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.14.0"; sha256="038d5rd649xyfl66h0gmfgp9ldmikl39qivmz0knl4g20b8p5ma0"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; + SELEX = derive2 { name="SELEX"; version="1.4.0"; sha256="1gxdcql81l8anjdrpi4mc8aw36srry076yhi7vwlia3s9rg3371i"; depends=[Biostrings rJava]; }; + SEPA = derive2 { name="SEPA"; version="1.2.2"; sha256="0nmi87s9288p5mrqajpkqq80y17lh71dhr996snp9przq00g2ga4"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; + SGSeq = derive2 { name="SGSeq"; version="1.6.12"; sha256="1swb3yac81s97m2bp15j02x0s364rf1szbhfmfpnmxmqmm9jdpsb"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; + SICtools = derive2 { name="SICtools"; version="1.2.2"; sha256="12jpr2w61pyx61rliz0snsa1ynyxl0kszvjqvk12rkihwgfrmld9"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; + SIM = derive2 { name="SIM"; version="1.42.0"; sha256="0sqm6rgfillq0fbiisy0g3cy0xyaaa7l93vw0gcjcyysyy0gls7c"; depends=[globaltest quantreg quantsmooth]; }; + SIMAT = derive2 { name="SIMAT"; version="1.4.0"; sha256="1z53q0f862irgdplszcpljkf27lsgw20055w0g80knygf6kkzyvq"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SISPA = derive2 { name="SISPA"; version="1.2.1"; sha256="17qvzlmbb4mpijfglfgnmk6xvirdc3xfi2fc8wwgcv4f3vw2sqmw"; depends=[changepoint data_table ggplot2 GSVA plyr]; }; + SJava = derive2 { name="SJava"; version="0.98.0"; sha256="05y04474frdm78lpwvbqsqbg9d1nw746j0ndllh2489p6qk0w2ky"; depends=[]; }; + SLGI = derive2 { name="SLGI"; version="1.32.0"; sha256="1ki1vyaabzlcjkmmdf1rj73wadnahdgvnyz5zkasfszxfifxa5x5"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; + SLqPCR = derive2 { name="SLqPCR"; version="1.38.0"; sha256="0jzfcbhm45sgppxm21y969l2wwvvi3i0k73pgi91djxww9iax302"; depends=[]; }; + SMAP = derive2 { name="SMAP"; version="1.36.0"; sha256="0w43xrmcy6rk0rfrd5jx3s646bk2nwjcignd8gh4wg9x2wp03f9n"; depends=[]; }; + SMITE = derive2 { name="SMITE"; version="1.0.2"; sha256="1y6i5bifxfabhpp60np60rxqj5flxwrc3dxz5nclgm4c3kr95gk1"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; + SNAGEE = derive2 { name="SNAGEE"; version="1.12.0"; sha256="00vxji06x84fh3sfgpdfk67ll1mxvbh58p16dyhd5xjw2rb37s6q"; depends=[SNAGEEdata]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.6.6"; sha256="0cjgzww9pj4ivg8rdiaz1v1kv83ghsypjm57pqbx093b1xdjgkq8"; depends=[gdsfmt]; }; + SNPchip = derive2 { name="SNPchip"; version="2.18.0"; sha256="0ajzpwspbw9jn6lpf5z0rgg1gxfr8d4qw8pwxd64784lwfcvn063"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; + SNPhood = derive2 { name="SNPhood"; version="1.2.3"; sha256="00kr6ri7vv7m0qz5wzx7bd6hj92mp2pbprbyc79ggan5dzpfaxsc"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + SPEM = derive2 { name="SPEM"; version="1.12.0"; sha256="0m3cd58nm3jmdzsph3yq8ndp8civmckhf553yl1q8y4v99y9dpa4"; depends=[Biobase Rsolnp]; }; + SPIA = derive2 { name="SPIA"; version="2.24.0"; sha256="1mp626ygyyyi2faad0qg5bi86rg21sq2bs0jxs95fwcwyziwj8np"; depends=[KEGGgraph]; }; + SQUADD = derive2 { name="SQUADD"; version="1.22.0"; sha256="098621vqfykkry6hf06yg4fg4ickrcb8wscv89s763kjc1nlkly8"; depends=[RColorBrewer]; }; + SRAdb = derive2 { name="SRAdb"; version="1.30.0"; sha256="0adrrs5bcpxqsji41wah2pww591wv8g1abrkim08cry5wpprznj9"; depends=[GEOquery graph RCurl RSQLite]; }; + SSPA = derive2 { name="SSPA"; version="2.12.0"; sha256="0v9xi3s7ayab6qcark77kblnyzh2jp0vschh4ylpfgjqljy0cing"; depends=[lattice limma qvalue]; }; + STAN = derive2 { name="STAN"; version="2.0.3"; sha256="0fkiskqylpdwgwr9nanf4xajdq9v09f6dqja69d4rw2bksb1xxqs"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; + STATegRa = derive2 { name="STATegRa"; version="1.6.2"; sha256="1np76zcxqh3yqjbxqvlzfasf95bjp3sa5f7nwyzz3xffykb4fzbp"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; + STRINGdb = derive2 { name="STRINGdb"; version="1.12.0"; sha256="0vww6nqv00n1230xqf48j99252dmpwa9sd9pgsjlvcgzbwgnccnk"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; + SVM2CRM = derive2 { name="SVM2CRM"; version="1.4.0"; sha256="10418yvdyw9n74qjhlm9zcdnw2qpyxc75j5i3ayqdnym2xq5qfvm"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.2.3"; sha256="06pajvvis9wi9pn9rfgsdwhpvdyp6zf2iv0kd3rjkvr9ypl9m0z4"; depends=[data_table ggplot2 reshape2]; }; + SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.26.0"; sha256="1m47ysqnihm0kggqwzczvl8c2njcv7whbl1pz7q75bn02wn2nx09"; depends=[]; }; + ScISI = derive2 { name="ScISI"; version="1.44.0"; sha256="0yqq5jnyksnlwpxq9n5ajg7h0fzvm4pphsc6xks0fx7zkb7j65b2"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; + SemDist = derive2 { name="SemDist"; version="1.6.0"; sha256="1na6imf2n5q3sjfrjnhyf8jwygn4h5mafsnmlqpjjsamn7jnnp2d"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.12.9"; sha256="083wkjbmph9lw9psfb8gvmkpwwgrs6p8l6wldcffq1bp46kzmlpk"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + SeqGSEA = derive2 { name="SeqGSEA"; version="1.12.0"; sha256="06srbq183hdgvjg7dlx9iycb557j9pv9ip9ffm66kigwyyyg7ys0"; depends=[Biobase biomaRt DESeq doParallel]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.10.1"; sha256="1jali8s39gc9v9r69gknwsgkjxjp4sqyv45gkri289qx1cv4ck69"; depends=[Biobase gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray stringr VariantAnnotation]; }; + ShortRead = derive2 { name="ShortRead"; version="1.30.0"; sha256="0qlxns4bhwfpafx3km2lnivgl2qyp7n4g1ardm6vrinpq8paxbjg"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; + SigCheck = derive2 { name="SigCheck"; version="2.4.0"; sha256="0c2wlp96dvwjxaa533lf0dqn42nbiilca0klzw8ca0b8qq81506c"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; + SigFuge = derive2 { name="SigFuge"; version="1.10.0"; sha256="142aas9vcsf9n69c22rfmz1aidr6r9bi6q2vzl5dcj9yyfgm44h7"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; + SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.10.0"; sha256="11k8vwwjiz5q586cqcc4z2yr9h6kj78n3k4kwc33cb5yxvv5yf4p"; depends=[Biobase limma mclust Ringo]; }; + SomatiCA = derive2 { name="SomatiCA"; version="2.2.1"; sha256="17kmqrqjis7zg4wn2h1jmq27q57l3p8fb8sy9x3wm5wh2kh476nn"; depends=[DNAcopy doParallel foreach GenomicRanges IRanges lars rebmix sn]; }; + SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.8.4"; sha256="1mkwsvn5z78sba9sx0hxrfnpkqz5xjs0zhc2a93ljx1fxzsxx8kh"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.10.0"; sha256="11vn9l50ndkxb0yi4nx1g23hzmcwlgiqjrv74vyncpkc8dw6kx76"; depends=[iPAC]; }; + SpeCond = derive2 { name="SpeCond"; version="1.26.0"; sha256="0f2m2cyqnr495hlv167hpki2syn8pq3aicsnn52qycyx7ym4rywa"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.2.5"; sha256="0q3l0fw9yx47d02w4ivaafrb4rclnd85fmyf46lxhjaskmsb10gl"; depends=[AnnotationDbi ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.12.0"; sha256="1jqngzakzc28vclxd14cbgfihvh161qh665ps5zmc00sjiapfh14"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; + Starr = derive2 { name="Starr"; version="1.28.0"; sha256="15h869kg4ba6qcx0gvjfp3k4dkdxxl9pbr1cpmyjha05zvbk3zss"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; + Streamer = derive2 { name="Streamer"; version="1.18.0"; sha256="03p4dpi5lfl3q4wfh2q26vmshawxzpj5linh1933724lip4bn20l"; depends=[BiocGenerics graph RBGL]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.2.3"; sha256="0c43fsrha886sd0diislnlf8r5h5x7fbhphkzcm0rw3k2jz8wlyk"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + Sushi = derive2 { name="Sushi"; version="1.10.0"; sha256="0y9gz80xf5y2pilcg7c3gffsdspgr2hr51jbk4xhazijzimwf70k"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="1.0.0"; sha256="1j0dzmx8d247s206cfzf80p6gjgh44qfccvbn0xmjrpswbwsj3sy"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.10.0"; sha256="0prwypkjq3kry70akfah50bfh6rdhfwgcc5a7wp7vd7nz2sn78cs"; depends=[gplots heatmap_plus R2HTML signal]; }; + TCC = derive2 { name="TCC"; version="1.12.1"; sha256="1zk7njhdv50lryrdnlnvrbkzpjz4zizwzv0v7hdxg45jak1q7zvd"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.0.13"; sha256="0hs370sjkx5x8fgz902a91q1r5p9am6s0a2sscsw1x391xz659ad"; depends=[affy Biobase BiocGenerics biomaRt circlize coin ComplexHeatmap ConsensusClusterPlus data_table dnet doParallel downloader dplyr EDASeq edgeR genefilter GenomicFeatures GenomicRanges GGally ggplot2 ggrepel ggthemes gplots httr igraph IRanges jsonlite knitr limma matlab parmigene plyr R_utils RColorBrewer readr reshape2 rvest S4Vectors scales stringr SummarizedExperiment supraHex survival TxDb_Hsapiens_UCSC_hg19_knownGene XML xml2 xtable]; }; + TDARACNE = derive2 { name="TDARACNE"; version="1.22.0"; sha256="11hy6j6yv008bfkggjyb08k9dzk2xy5sdklga62v8lczpwd161wn"; depends=[Biobase GenKern Rgraphviz]; }; + TEQC = derive2 { name="TEQC"; version="3.12.0"; sha256="0ayw4ir8rpq1lk2ml7djp8x67fhn43x852p3myjnb0d8war46whm"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.10.4"; sha256="1hgaqng02y0kgmjnxv8z93698hslr7cqbmgdf8rpaxg6zbn9cb0h"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TIN = derive2 { name="TIN"; version="1.4.1"; sha256="1mgbbk2jifb04c07bwhj9azhgsnza05qf28l2jpi9d10qnfn0nxq"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; + TPP = derive2 { name="TPP"; version="2.2.6"; sha256="1xzvd2pf6j7d9wwjsfvxzl4xib0h2nxkp4zzb3g60p6mfydr78gd"; depends=[Biobase doParallel foreach ggplot2 gridExtra nls2 openxlsx plyr RColorBrewer RCurl reshape2 VennDiagram VGAM]; }; + TRONCO = derive2 { name="TRONCO"; version="2.4.3"; sha256="0j32db8d067nd7fiiny4whv1hm4w8fv1ivq91ri728n21f92qw52"; depends=[bnlearn cgdsr circlize doParallel foreach gRapHD gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TSCAN = derive2 { name="TSCAN"; version="1.10.2"; sha256="15mi3qg8qrwa44h52cbrmalyi13bbllzcjc4dglpp9mnybwrs126"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; + TSSi = derive2 { name="TSSi"; version="1.18.0"; sha256="0y2grk912mv2jfadypfrxr5k2kkwl6s2dcnn7g3svj65038b92jw"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.2.0"; sha256="1a2gg203j9djf01w5xk04h79mn7wgd1yibgrvp1qaj3hvl0i0n54"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TargetScore = derive2 { name="TargetScore"; version="1.10.0"; sha256="1rj56jjhp4cz6jp5xrbmj9s3jszq5dmczf5szbzc34fg70y4fbqs"; depends=[Matrix pracma]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.28.1"; sha256="0wl9qx6q1czz2nhzz7di928ldv2x0bwj5si6kfm9rpw9q5v6wcs2"; depends=[ncdf4]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.10.0"; sha256="085z6j0a0rk86lm8c1asks2rvl7f0w1ncvsly2p8s9jfbk8yahwc"; depends=[foreach GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + ToPASeq = derive2 { name="ToPASeq"; version="1.6.0"; sha256="1q9ys84ccv79jm475vm40ncm15dchlw8ak3xarsw9vkdrr4dv5wl"; depends=[AnnotationDbi Biobase clipper DESeq DESeq2 doParallel edgeR fields graph graphite gRbase KEGGgraph limma locfit qpgraph R_utils RBGL Rcpp Rgraphviz SummarizedExperiment TeachingDemos]; }; + TransView = derive2 { name="TransView"; version="1.16.0"; sha256="1s4i694g2qlf9hsci6flm6z7vxic0n63rc1fi4dh8ag9ds2b9wzj"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; + TurboNorm = derive2 { name="TurboNorm"; version="1.20.0"; sha256="0rda1gw43nbs9p3axsiwr3vv2rxnpnpsip8pjk8z6jbk01hc76jx"; depends=[affy convert lattice limma marray]; }; + TypeInfo = derive2 { name="TypeInfo"; version="1.38.0"; sha256="1lg9s53a1cn8zqh4jkns7x9ivp4wc1557nphv6g5m227pi008vrx"; depends=[]; }; + UNDO = derive2 { name="UNDO"; version="1.14.0"; sha256="1i9hsyrmzlnkl37wkxkxb4y26qr3ds987kb0f18c1g75pm3pg5vd"; depends=[Biobase BiocGenerics boot MASS nnls]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.12.0"; sha256="09wayrpkk9mpmm8a6ckjyazlyqy9lfnz89xj665khnpblicn0f89"; depends=[AnnotationDbi BiocGenerics RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="1.0.8"; sha256="04zc53lh2r4mv6sybs3rf4b7gqv66q1gic8fycyba8fhb4p49glp"; depends=[DBI R_utils RSQLite stringr WriteXLS]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.34.0"; sha256="038ziyk80ilfwyxg104sz436all2spblwfy7gk64prshzlb04hbc"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.18.7"; sha256="002kif2c66wbcng953m3g1jys7w1lgz7hh3zsk4jlnhc20jdv1vj"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.8.6"; sha256="1na1z0hk8xyvlwb43d4knnhaggbirlq1bdsb53q3s9agqkc8lki2"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges graph Gviz IRanges RBGL Rsamtools RSQLite S4Vectors shiny SummarizedExperiment VariantAnnotation XVector]; }; + VariantTools = derive2 { name="VariantTools"; version="1.14.1"; sha256="08kasppyj8h2vrs3sk9m8f1ixk5r689j9i43j0qjdp3kl8kr8ply"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges gmapR IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + Vega = derive2 { name="Vega"; version="1.20.0"; sha256="19pd5jgc83gwgdmi1c2n5hjark0qk20svh0w5ay49xs82f939hj2"; depends=[]; }; + VegaMC = derive2 { name="VegaMC"; version="3.10.0"; sha256="05mkdqriizqddi6p9mnb52zamvgm8w967g1jjbinakhb6fbxqv76"; depends=[Biobase biomaRt genoset]; }; + XBSeq = derive2 { name="XBSeq"; version="1.2.2"; sha256="1ilvzhl373lpxsq9ff5i1hx09s0jj3ahkhg6i4x2dnqciq2kkax4"; depends=[Biobase Delaporte DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma]; }; + XDE = derive2 { name="XDE"; version="2.18.0"; sha256="032bvdc2740cni5lkvkiybmyf01y6hg8xmz216p73aj75ggbp6i1"; depends=[Biobase BiocGenerics genefilter gtools MergeMaid mvtnorm]; }; + XVector = derive2 { name="XVector"; version="0.12.1"; sha256="1kydy9f5y0ihn2mbkamr1kh0g1d3g1k9d7s4i09qgw9ysr6j414v"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + a4 = derive2 { name="a4"; version="1.20.0"; sha256="0da0wivzg69f115yc77vajmzkqvb6y98lg35q2gsrb44wyhsvv2f"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; + a4Base = derive2 { name="a4Base"; version="1.20.0"; sha256="0pjanqc2z19ya3p87sqfb6avb3xmmhmr96c2bg0psjrh986d67q9"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; + a4Classif = derive2 { name="a4Classif"; version="1.20.0"; sha256="13a97mbfrzs4wfrm2qswrzw0rxiqc8405imz5lii7qygrmw3l8mr"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; + a4Core = derive2 { name="a4Core"; version="1.20.0"; sha256="0aqrb7d54mbdpkk1q86y5ixfnp569kzrw9azl7v4fwcb9y54k344"; depends=[Biobase glmnet]; }; + a4Preproc = derive2 { name="a4Preproc"; version="1.20.0"; sha256="06y6v1lj3wbhvr6y6q36qvkpxbbj2wcbhzzwkh4dsfvblwr90sw6"; depends=[AnnotationDbi]; }; + a4Reporting = derive2 { name="a4Reporting"; version="1.20.0"; sha256="0rfaqy40m7mhf3zjgcmsz99sm9f4nvbk8sqxn7lswwr42656ga8g"; depends=[annaffy xtable]; }; + aCGH = derive2 { name="aCGH"; version="1.50.0"; sha256="0g5gxc7204171lb1mf00vdi5yj4cfvvaspzd12xxp6z62ndw8ws7"; depends=[Biobase cluster multtest survival]; }; + acde = derive2 { name="acde"; version="1.2.0"; sha256="04r23mxk2srspzl2sghkjvr98apyq2kz213wmks4kpa6lpzvsipx"; depends=[boot]; }; + adSplit = derive2 { name="adSplit"; version="1.42.0"; sha256="1qrni9jsn9q1y9kskxynyi7pihzf79kbgchpfnbqr8q3xfjbfcm1"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; + affxparser = derive2 { name="affxparser"; version="1.44.0"; sha256="125ckbcc1bg041a9khiv9m3hdvzhm7mmi3hk2zp4hzza11a9mww6"; depends=[]; }; + affy = derive2 { name="affy"; version="1.50.0"; sha256="15620q8x0d42izn5hdbbmj7207id5ld1waws2d9ykplbv88ld8a5"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; }; + affyContam = derive2 { name="affyContam"; version="1.30.0"; sha256="0bzifl3dvccy2x2al3p9fqwhznxp8j0hisa2sr9hs896s0frc5a6"; depends=[affy affydata Biobase]; }; + affyILM = derive2 { name="affyILM"; version="1.24.0"; sha256="0w2x43xziy1d5nq6vmgnr753z36841y5n552h1liwbf6wzrwm4mi"; depends=[affxparser affy Biobase gcrma]; }; + affyPLM = derive2 { name="affyPLM"; version="1.48.0"; sha256="1g4ci0k5b8i05wpa4kyxm9f83qyb0ym4v8v5vzqq35yhsh78lhw7"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; + affyPara = derive2 { name="affyPara"; version="1.32.0"; sha256="183npqbc6zr8rwkfrsk78s8vha8fcmahwzn4fh39chf010kkxjvy"; depends=[affy affyio aplpack snow vsn]; }; + affyQCReport = derive2 { name="affyQCReport"; version="1.50.0"; sha256="12yk6qdwj1840kys8j8iipsbyrgqkv826arqsvvb0kk9h0bqw3b8"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; + affycomp = derive2 { name="affycomp"; version="1.48.0"; sha256="0w1095afp97c2qi2rrlp64yhxh0qrlnrgd6d3q1v608lv9nwknxs"; depends=[Biobase]; }; + affycoretools = derive2 { name="affycoretools"; version="1.44.3"; sha256="11cvxkir715kj3z9qsshss6zpxshynzw19nk9dpvvw7g76wvljfn"; depends=[affy AnnotationDbi Biobase edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools S4Vectors xtable]; }; + affyio = derive2 { name="affyio"; version="1.42.0"; sha256="0rx7vf9fpl4jpnvdcvwh250nnpzxarrrl87dp0pwasmghzdyl9vw"; depends=[zlibbioc]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.46.0"; sha256="1xspid2m74cyivhmhx4jlpli9pixvx0jfs5r05w4k9mj7jjxaivv"; depends=[affy affyio affyPLM AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; + affypdnn = derive2 { name="affypdnn"; version="1.46.0"; sha256="1yvr21w5s7kxl8rcp052f440l2czbwchmyi3hcpiqjvxc6fjmb9q"; depends=[affy]; }; + agilp = derive2 { name="agilp"; version="3.4.0"; sha256="18gd0wj3gz0fbasrfi8jx1r6m0nl7q83p9dcp2jqbkgrqk6r3ki5"; depends=[]; }; + alsace = derive2 { name="alsace"; version="1.8.0"; sha256="054pbjii52325xf3ar1ma8afnmxzwirgygj2xl5y2ngq09lyd9m6"; depends=[ALS ptw]; }; + altcdfenvs = derive2 { name="altcdfenvs"; version="2.34.0"; sha256="009cqk05bld0h0p8wmz8103irs1gbgyrpsnq5nsglywk1i5hqq4a"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; + ampliQueso = derive2 { name="ampliQueso"; version="1.10.0"; sha256="1kliy097yycls88cd3qxdg8vjwbb8v8iv9kp12kdq2ws5rc1gcvn"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; + annaffy = derive2 { name="annaffy"; version="1.44.0"; sha256="11dfl5mfzghyc8rc3dnclmwnn4kbrgmzizbqgj5dvy5x70s79hi8"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; + annmap = derive2 { name="annmap"; version="1.14.0"; sha256="01s00vg5p0kcpdsh4mib9xiv6y2fygqxi6n7bm6q94vrwaipjwmd"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; + annotate = derive2 { name="annotate"; version="1.50.1"; sha256="0anjh1b3vckgcfdxdd7jdhzsdivjlgx381i97iz59691kmvf8pqk"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; + annotationTools = derive2 { name="annotationTools"; version="1.46.0"; sha256="1ywpxlb3faikjqvaksr4xx1b48daa6yf6vmhs20llp9rrpwnl51p"; depends=[Biobase]; }; + anota = derive2 { name="anota"; version="1.20.0"; sha256="0kzf4lkgb54w8dy5xkadgnf9j4s47xnc53s3xn824k6sdg0l6grh"; depends=[multtest qvalue]; }; + antiProfiles = derive2 { name="antiProfiles"; version="1.12.0"; sha256="1y2sw41rv92wyq4dsqy45r0yqbmvp0dyh2jq8prqaniiiwhxh1b4"; depends=[locfit matrixStats]; }; + apComplex = derive2 { name="apComplex"; version="2.38.0"; sha256="0virfxj7x7nzs1xhh9cia3c951mlcgj918sfzy9w75p6cpciaww8"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; + aroma_light = derive2 { name="aroma.light"; version="3.2.0"; sha256="0yjmmxh8gl5nr5w3913xvk9nxmxd8qidjmzkdxwf756g01a6gr4m"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; + arrayMvout = derive2 { name="arrayMvout"; version="1.30.0"; sha256="12ws1bc7jwnys7dj43bd2iib7gdak9i3sirsnkldcyk6ndd18wi1"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; + arrayQuality = derive2 { name="arrayQuality"; version="1.50.0"; sha256="0jv03ywh3hngykll9zbywlsdq0wl7629qlm285z3as6kjzv04dkk"; depends=[gridBase hexbin limma marray RColorBrewer]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.28.2"; sha256="08jm8wxrnxik6s9lnchq5crglzxscrnh1a06nbfdaj3h9nxwcb01"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; + attract = derive2 { name="attract"; version="1.24.0"; sha256="0d7bcdmk9dgx2yqsvvmq39l63lajx4nvx4km1b3nnqiwqph3cmlr"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; + bacon = derive2 { name="bacon"; version="1.0.5"; sha256="1cnjlgjivxgswfqvk9yk8b4pi89sr8mxaci486mybpbjvzrjzsc8"; depends=[BiocParallel ellipse ggplot2]; }; + ballgown = derive2 { name="ballgown"; version="2.4.3"; sha256="09nd5792cfi5zbqi58a8ggl4nff6n87jyix0fwn3xgf91qzcrgmr"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bamsignals = derive2 { name="bamsignals"; version="1.4.3"; sha256="1xqiqvg52p6fcvhr4146djbz79r3j1kmh75mq7rndwglmiybpwmy"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + baySeq = derive2 { name="baySeq"; version="2.6.0"; sha256="1c2la9fw65mz4ns07h9n97di1rvzw8q8ga84x4x14y4hcm1zcr5a"; depends=[abind GenomicRanges perm]; }; + beadarray = derive2 { name="beadarray"; version="2.22.2"; sha256="03dzp6fpwwc3znf6by1c1s279ry41c8rlszclixzkmhm1q7vxf43"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; + beadarraySNP = derive2 { name="beadarraySNP"; version="1.38.0"; sha256="0wy6zva0z93i4hgcms8fvsbrhk9kzrapsiha72rsirgsd94zxsrw"; depends=[Biobase quantsmooth]; }; + betr = derive2 { name="betr"; version="1.28.0"; sha256="147i92ki54l0m26i6da1mp4cx7d3g3dd3sp9dk2lz0j46wd3476n"; depends=[Biobase limma mvtnorm]; }; + bgafun = derive2 { name="bgafun"; version="1.34.0"; sha256="0z8p6zl2080kkr48q86kqh2bhs3fiq6zzzjj8vgv7mqjwgwf8w06"; depends=[ade4 made4 seqinr]; }; + bgx = derive2 { name="bgx"; version="1.38.0"; sha256="17dmjh35hr4jbxqwvw5r5w99m27ck8zyfdysd86cc679fc1d6ird"; depends=[affy Biobase gcrma]; }; + bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.18.1"; sha256="0qv3l5yvg530a3mqdgnp01z3idkxr8qlnd30qplr8wr33gxvqa9f"; depends=[bigmemory]; }; + bioDist = derive2 { name="bioDist"; version="1.44.0"; sha256="1z1pgyrz1fswvsjravamx1w756w7y1ld4v8ijbhms8n39397jzza"; depends=[Biobase KernSmooth]; }; + bioassayR = derive2 { name="bioassayR"; version="1.10.15"; sha256="01gr7k0irkblhivnz4vj2y6pxwkhz2ccw9y4wcw4cf6j0yp6aq9x"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.4.2"; sha256="1i5y32sb8zm23nkxx05b05wcqr1zgg2mh2rfdif3a27ax6r6vkiy"; depends=[Biobase broom dplyr tidyr]; }; + biocGraph = derive2 { name="biocGraph"; version="1.34.0"; sha256="0x1ka2b6gwzncb3s8k4dz8wnwfwiwzcmfzp0xrh94mrmwhda618p"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; + biocViews = derive2 { name="biocViews"; version="1.40.1"; sha256="1d1g06zwx3xhc07mdhs5x31730xw08fg3x73xyfj0qdy2ykww3f9"; depends=[Biobase graph knitr RBGL RCurl RUnit XML]; }; + biomaRt = derive2 { name="biomaRt"; version="2.28.0"; sha256="1g0w6an9hkflgyhvq6pmrs92s93qarv23v636b9a4bz771wjvm5v"; depends=[AnnotationDbi RCurl XML]; }; + biomformat = derive2 { name="biomformat"; version="1.0.2"; sha256="1shbf6gscvj6n52azvx6phcql3p462bk68cr9gr44lshq3y3g49d"; depends=[jsonlite Matrix plyr rhdf5]; }; + biomvRCNS = derive2 { name="biomvRCNS"; version="1.12.0"; sha256="1yr8bhqmkmvmw26fv53xkam05z17b0chwziv8b793f8zlkq34hw7"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; + biosigner = derive2 { name="biosigner"; version="1.0.8"; sha256="16v3kvd4zgsws59cz67642dnyzk9a8fjdb5g2mssh6znk9v6ig4a"; depends=[e1071 randomForest ropls]; }; + biosvd = derive2 { name="biosvd"; version="2.8.0"; sha256="11wzvy6x5zvqxl1g3z7xbsmn94ygy7fiazaq97fg88xqcc910kmv"; depends=[Biobase BiocGenerics NMF]; }; + biovizBase = derive2 { name="biovizBase"; version="1.20.0"; sha256="1plrwh1rqm6830xzmws9fna6azyalfnvn6r55bxifnhxy2zi1dpv"; depends=[AnnotationDbi BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + birta = derive2 { name="birta"; version="1.16.0"; sha256="0nrvdpfjra9ndqk2v07pl8srizg5nfigk3l25d28wzz81ngvcdfq"; depends=[Biobase limma MASS]; }; + birte = derive2 { name="birte"; version="1.8.1"; sha256="1d9hvwc7fcdbk4c93qgmgcrs5fpjjl4f469z8sk60ryrc8v58i9f"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; + blima = derive2 { name="blima"; version="1.6.0"; sha256="1hirr1g1q6bn6l877m9zz9vl8vnpdv8ziacp8d2if98anh8xmp4q"; depends=[beadarray Biobase BiocGenerics]; }; + bridge = derive2 { name="bridge"; version="1.36.0"; sha256="027098brim9m6dwf5m5ksjidy4g5q4s7hq92spqvnmjpcfrc9bzx"; depends=[rama]; }; + bsseq = derive2 { name="bsseq"; version="1.8.2"; sha256="0pv4fsw0mjcyq3171d507bwv8aqwzsqdy0v2ghlkx5z94qxsk67g"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges gtools IRanges limma locfit matrixStats permute R_utils S4Vectors scales SummarizedExperiment]; }; + bumphunter = derive2 { name="bumphunter"; version="1.12.0"; sha256="02apjhvwqizlwmcw6qzaqj9p73j5qvnnf7bxzmgqy76m0723k2qi"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + caOmicsV = derive2 { name="caOmicsV"; version="1.2.0"; sha256="1a90karz4m13lpsys9zlif6y95xxh4b5g8l6db2v0hfcfrz5msk5"; depends=[bc3net igraph]; }; + canceR = derive2 { name="canceR"; version="1.4.0"; sha256="1fk8mv5jx22y36m7bb8avf51dgpzyhx5j1kk1vglcyym9g4d39cw"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + cancerclass = derive2 { name="cancerclass"; version="1.16.0"; sha256="0j3apzzkh744hha3nzsg0inhgr24dp9l217vgzjyrxq2x6rq9fra"; depends=[binom Biobase]; }; + casper = derive2 { name="casper"; version="2.6.0"; sha256="071x3182mjwd56dchz6mndzc3gpibxbvh30k957qdmmfc6bpadi0"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.16.2"; sha256="0l4zaw9f3h0innxpxphv46f7blk0aa1xfy6r7rya2rqb89rnf3vk"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCytoscape]; }; + ccrepe = derive2 { name="ccrepe"; version="1.8.2"; sha256="0qh1a5j4i1x4w6d7nvv4fb4prhyfhb54knav3849c6flkx4px2pn"; depends=[infotheo]; }; + cellGrowth = derive2 { name="cellGrowth"; version="1.16.0"; sha256="00qijblp5ycjhl6vrvdjfzx87k95p84mxglk1gpnrsqxkvaf61dx"; depends=[lattice locfit]; }; + cellHTS = derive2 { name="cellHTS"; version="1.42.0"; sha256="0ghls72gnsgqc28km5a1i37y0hg2774b09ws20l6jfgj215lsfas"; depends=[Biobase genefilter prada RColorBrewer]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.36.0"; sha256="0f6406a1r5gqh25kq6fl9hws5bxjcmg8dz93hf24iqfkri8qzzw8"; depends=[Biobase Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.2.2"; sha256="0wzdbyg8yj602mndpmwaqfhyql424w0fgnphyv4v2qr52wwzpz12"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; + cellity = derive2 { name="cellity"; version="1.0.2"; sha256="0qg1g8k6wfamsazj13nlrra3zydj5r2yn42zkzniwyrc40fvlm86"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cghMCR = derive2 { name="cghMCR"; version="1.30.0"; sha256="1g66pc61nj628dip1rysc0mdq6yjhiznv6p8nfw5lmm1kbg3jzn1"; depends=[BiocGenerics CNTools DNAcopy limma]; }; + charm = derive2 { name="charm"; version="2.18.0"; sha256="1lram97r7bqbmi6qxwdjsi4m6vvqry84f2l2afzl1f6v7yjzs1fj"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; + chimera = derive2 { name="chimera"; version="1.14.0"; sha256="01j46sycs492j550n6z38nj23s6v0b0mrffpyc2hv95g6nf5vmx7"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + chipenrich = derive2 { name="chipenrich"; version="1.10.0"; sha256="0nx5mmdxjra1vkdssn3dwf6jafdqvjbc53vcqfva0ns4jyyzx89l"; depends=[chipenrich_data GenomicRanges IRanges lattice latticeExtra mgcv plyr rms stringr]; }; + chipseq = derive2 { name="chipseq"; version="1.22.0"; sha256="0b42aikjq4wk83v314yrq1jjmz0vszk9z00xw069h84shz4zrnng"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; + chopsticks = derive2 { name="chopsticks"; version="1.36.0"; sha256="01r6w9y7gw0zja2vpr5g4mp4400njixc0mrlmy010brdfjx6zgg1"; depends=[survival]; }; + chroGPS = derive2 { name="chroGPS"; version="1.16.0"; sha256="1h0nfn74agdhwcr1w1xj0iid3y0g0mkf22b3zajxyr9yjpjws7z8"; depends=[Biobase changepoint cluster DPpackage ICSNP IRanges MASS]; }; + chromDraw = derive2 { name="chromDraw"; version="2.2.0"; sha256="16p54kd35ghdx67pnlcm6v9paic0iwl5sz4343v8rhf8yf9dxyih"; depends=[GenomicRanges Rcpp]; }; + chromPlot = derive2 { name="chromPlot"; version="1.0.0"; sha256="1qwnqmihapc0xiii8ihpw9xralwaac2jn1k62rd1a83w6b3l76f7"; depends=[biomaRt GenomicRanges]; }; + cisPath = derive2 { name="cisPath"; version="1.12.0"; sha256="1a3kjahscpdpgv07d3sjag29szyjnrn2fmgv534ljasjqdk7ay5k"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.10.2"; sha256="1p2c2a7snnz25msmzxa30aijpha8mivpw6rmbqcqhv78xv5a51qq"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; + cleaver = derive2 { name="cleaver"; version="1.10.2"; sha256="08v4a6rc5yx3vqjdjdzxsxh6m4dnj52ybnchhhx0qq3y8ma4djd3"; depends=[Biostrings IRanges S4Vectors]; }; + clippda = derive2 { name="clippda"; version="1.22.0"; sha256="19in9vc3w35v1ixwc2i7n1nm8zc7i79hhig2n224zjrl15j0bd9a"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; + clipper = derive2 { name="clipper"; version="1.12.0"; sha256="0f8zx4s7linhwflnz57qhgx16zkxlgd8mlsck4py5zvs9zz7ph6c"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; + clonotypeR = derive2 { name="clonotypeR"; version="1.10.2"; sha256="1l4dmbszg4qkw4ksj1lcfrfi5j8fvk51qsc1l7bhvcvzwvbp9p6b"; depends=[]; }; + clst = derive2 { name="clst"; version="1.20.0"; sha256="04wq05qyrxbd138y7npfmnr7d8pngldcm77ksf5ckn92n6gc46nk"; depends=[lattice ROC]; }; + clstutils = derive2 { name="clstutils"; version="1.20.0"; sha256="0fz7mcf7csfmw9r18anliwkh77nv6bhkq6ah6cx1a5nvn05pq4l9"; depends=[ape clst lattice rjson RSQLite]; }; + clustComp = derive2 { name="clustComp"; version="1.0.0"; sha256="0k0l8s50hnpsfsfalfcvjfg38dv9pyi12g8m17nqrrvkldld7p9y"; depends=[sm]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="3.0.5"; sha256="1sm8dcyps81phf2jz7xc27wg3i43nr32883r2pb4s7syqsl4kvn0"; depends=[AnnotationDbi DOSE ggplot2 GO_db GOSemSim GSEABase IRanges magrittr plyr qvalue S4Vectors tidyr topGO]; }; + clusterStab = derive2 { name="clusterStab"; version="1.44.0"; sha256="039xnvsji3aqvxkj4zq02lv5nk0hkgkhhvk7x9bqhgc1jlafgbrf"; depends=[Biobase]; }; + cn_farms = derive2 { name="cn.farms"; version="1.20.0"; sha256="1f55s7x8g7jyljgcdxvcfgy65h5dm7fmgwxb1qdh557sifalvy0v"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_mops = derive2 { name="cn.mops"; version="1.18.0"; sha256="08mhnn6vgbcfb1y84s2f7mk96z5fhafrb72cacfc8ija4l0a86ki"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + cnvGSA = derive2 { name="cnvGSA"; version="1.16.0"; sha256="1ggm0gk6vjx7161xc8pcy7d9z1z4mngxbhjmmnj9w7qd2225yblk"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; + coGPS = derive2 { name="coGPS"; version="1.16.0"; sha256="1y5c43s6ivmin43rahvywm0jqyflw3klzj56b5f5yvbcn13m463w"; depends=[]; }; + coMET = derive2 { name="coMET"; version="1.4.4"; sha256="0cawkc12cj2039p7d416jalz0n6p311lir2f5cdly79n2phi1wyx"; depends=[biomaRt colortools corrplot GenomicRanges ggbio ggplot2 gridExtra Gviz hash IRanges psych rtracklayer S4Vectors trackViewer]; }; + coRNAi = derive2 { name="coRNAi"; version="1.22.0"; sha256="1ib66fljgiqykjs0i9yrqsa979ibz7nllh3f3gybzrs86k8i5p6h"; depends=[cellHTS2 gplots lattice limma locfit MASS]; }; + cobindR = derive2 { name="cobindR"; version="1.10.0"; sha256="16b085jxfc2ph69m8rd7523mkvribbykzv05g54jakqcgz613g6f"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; + codelink = derive2 { name="codelink"; version="1.40.2"; sha256="16a2qshsc7515a35cah6snifv30rbb3gzb034amz1g3a2h24z2bq"; depends=[annotate Biobase BiocGenerics limma]; }; + cogena = derive2 { name="cogena"; version="1.6.2"; sha256="0xy31pr6ginsxzf2lwyd9mnraw690zj37xylm7xfi1w1kchg3nfh"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.6.4"; sha256="1v22hzp89409vfdi6v56cg4galfb8yr3sqpv9igjjvbbyvyil7p2"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compcodeR = derive2 { name="compcodeR"; version="1.8.2"; sha256="0w39pnyygvgicdivmcb6p0691fbrmg628d54i1wan070ndxkqn2x"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.0.2"; sha256="1lwzp5l463xg2q97mhf1cz1fgqyf0gwkzipnw1ars6832vpd579s"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.0.0"; sha256="1apjm3i4vlkwfgrrby58aimixqlmc56l24dc2vff8s8b568582w6"; depends=[BH BiocParallel clue cluster colorspace diagram DNAcopy exomeCopy GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + conumee = derive2 { name="conumee"; version="1.4.2"; sha256="0hk6chlakd2alghnzsfgzw9bw2js4byqd7lsk5kz3iwb3dds8k9b"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges minfi rtracklayer]; }; + convert = derive2 { name="convert"; version="1.48.0"; sha256="1pr5nn3k8a85r1ssp6hvgayrq6hars82m9v6h5arbz93ksjj4ax3"; depends=[Biobase limma marray]; }; + copa = derive2 { name="copa"; version="1.40.0"; sha256="0ly8af559z74v2lkhiviamb54b7jfpmmnqp9fxvv2c2vg56nnigx"; depends=[Biobase]; }; + copynumber = derive2 { name="copynumber"; version="1.12.0"; sha256="1rrc8mbkh73fizp2jdqqiarxbwryf25lwcf05dwvyqbnaz8c94zl"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; + cosmiq = derive2 { name="cosmiq"; version="1.6.0"; sha256="0057j6a4lsmjfvjk48x2axmg13f6qbf4pjzc2ijz98laljlakc18"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + cpvSNP = derive2 { name="cpvSNP"; version="1.4.0"; sha256="0hcamhbxrs5vpgw2rrm399s17ywnqqi4lx78aga2x8v9l9acga1z"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; + cqn = derive2 { name="cqn"; version="1.18.0"; sha256="01rqvs400ldfcyayjbqd2jpp550v8xh4a4kvic4b82dn3cxb301y"; depends=[mclust nor1mix preprocessCore quantreg]; }; + crlmm = derive2 { name="crlmm"; version="1.30.0"; sha256="0z8b97v04gmcv2zs7pnk3bwccx28whzgkgl4d1gah1b9rjpdifaj"; depends=[affyio Biobase BiocGenerics ellipse ff foreach illuminaio lattice matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; + csaw = derive2 { name="csaw"; version="1.6.1"; sha256="18qj9axgs94vkhxwx91lmpm8rssvwiidgbijzrzabss69y1m9g8y"; depends=[AnnotationDbi BiocGenerics edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + ctc = derive2 { name="ctc"; version="1.46.0"; sha256="0568b5b2f97jdsmhf6biixpjxd1wgh2imalcr94szynpsr5j2knz"; depends=[amap]; }; + cummeRbund = derive2 { name="cummeRbund"; version="2.14.0"; sha256="1ni7ldzbj5sjk2124i7s2p840z4igcaak4kjb28yhv7c0c2nx362"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customProDB = derive2 { name="customProDB"; version="1.12.0"; sha256="1nlyb71mrr7dd73n7gq5dvxp9yisqb8skfdabpn67wvx2kl0qq68"; depends=[AnnotationDbi biomaRt Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; + cycle = derive2 { name="cycle"; version="1.26.0"; sha256="0clsi3dm3dbmfd7g03gvfhc4zczfv6lfivrxgjbhs3wm79zgbl7l"; depends=[Biobase Mfuzz]; }; + cytofkit = derive2 { name="cytofkit"; version="1.4.10"; sha256="1gdbc8k0rqrk83h90rshax6bilbb8wip9xa9bf42301a87lysnk3"; depends=[Biobase destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny vegan VGAM]; }; + daMA = derive2 { name="daMA"; version="1.44.0"; sha256="1xx0ba5wjh1ma0fpshy50ajshfpv1w1zdmzrf21jdbq1zz8ciw87"; depends=[MASS]; }; + dada2 = derive2 { name="dada2"; version="1.0.3"; sha256="12bb9vp2yxayzxicnxjs0cb5bria6h9w06qcfn4yhnp4641ql914"; depends=[Biostrings data_table ggplot2 Rcpp reshape2 ShortRead]; }; + dagLogo = derive2 { name="dagLogo"; version="1.10.2"; sha256="018vdgbyfmsrxhkv9kf80yfsgdl3mqmvzfwcw5lanfyipwpl4jgm"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; + dcGSA = derive2 { name="dcGSA"; version="1.0.1"; sha256="1nnh3xa7gg1ap24wf79clkm4vrlr9jbvq5f5crl7f5mmfmxpzp43"; depends=[BiocParallel Matrix]; }; + ddCt = derive2 { name="ddCt"; version="1.28.0"; sha256="1k7r0w22as0226sq11kwfb5ihbim5i5bny2qvn7gx86fzyy0br43"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddgraph = derive2 { name="ddgraph"; version="1.16.0"; sha256="1yqkrzbkjn86mwjf5x5cq1gf8k20hnbhwppzkpspsdcyi68ldbf5"; depends=[bnlearn graph gtools MASS pcalg plotrix RColorBrewer Rcpp]; }; + debrowser = derive2 { name="debrowser"; version="1.0.10"; sha256="1l3pc6xqsvhmjddv27pkndgf9dz529svyj4dkm166yq4vm6pcska"; depends=[annotate AnnotationDbi clusterProfiler DESeq2 DOSE DT edgeR GenomicRanges ggplot2 ggvis gplots igraph IRanges jsonlite org_Hs_eg_db org_Mm_eg_db RColorBrewer ReactomePA reshape2 S4Vectors shiny shinyjs stringi SummarizedExperiment]; }; + deepSNV = derive2 { name="deepSNV"; version="1.18.1"; sha256="150aqdhzzydn2f3nr8zq6r7iwsr8l2jpaig5c8h7li9rhlzjma45"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.12.2"; sha256="0m071s1qs9xv0dxb8applj0dldv4aji9vlrflbszw82gp60wzpvf"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + derfinder = derive2 { name="derfinder"; version="1.6.4"; sha256="1iyabwad32g0p69651zph79zi0rvv7bpdrx66qkp7xqllddhxi8i"; depends=[AnnotationDbi BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.6.3"; sha256="1d58n1xm1rpr65hg5p3y3abylhcp6ih5vnld8ny89492n0ssvf4n"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.6.3"; sha256="1mdcd0cxarbjwq4qznlks9mpfz9x4w2cd04jfhfkywpf45fkc797"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; + destiny = derive2 { name="destiny"; version="1.2.1"; sha256="0cwgdqx07bflrpan49ra2qcxc5dhv5xq733gb3blcam7pvjj7mfw"; depends=[Biobase BiocGenerics FNN Hmisc igraph Matrix proxy Rcpp RcppEigen scatterplot3d VIM]; }; + dexus = derive2 { name="dexus"; version="1.12.1"; sha256="1ra6wxp3wvb9g5qpvh8bm0xb13yqjmnda60mq63hks6jdg2ippmp"; depends=[BiocGenerics]; }; + diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.54.0"; sha256="0fbk3idxd9hzh9v8gk6dma7l4512k0682kcsfr72h8v0l587ayfr"; depends=[minpack_lm]; }; + diffHic = derive2 { name="diffHic"; version="1.4.3"; sha256="1gvw6kslpadlyhslwngjfh81pgdgzn1h8dpxq32l29fpyrhiig9d"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + diffloop = derive2 { name="diffloop"; version="1.0.2"; sha256="0kgzvidpm6zxgh7rjrh4fvzvvkg4p3nm6pa9l57qnb1223r8ygwv"; depends=[Biobase biomaRt dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats plyr readr reshape2 S4Vectors statmod Sushi]; }; + diggit = derive2 { name="diggit"; version="1.5.2"; sha256="1rpp472cx3pvhi2f1xr52hdxkd9s79w4wp1iy89plam86wrp0xh9"; depends=[Biobase ks viper]; }; + dks = derive2 { name="dks"; version="1.18.0"; sha256="1nzpjph8n9s4kzyyffj6k1pbrvgzryagmr10l97dh2j2qsydz5kh"; depends=[cubature]; }; + domainsignatures = derive2 { name="domainsignatures"; version="1.32.0"; sha256="1jv72qiq5hyajryf91f6mnvbqd4klwsb0viiw4ykid02cj14vwz1"; depends=[AnnotationDbi biomaRt KEGG_db prada]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.0.2"; sha256="11g57fwhq7yzrzb5wdd07xxb75plrqdmdlar2qvn6kmbi2knn7dg"; depends=[Biobase BiocParallel digest impute mnormt sva]; }; + dualKS = derive2 { name="dualKS"; version="1.32.0"; sha256="1f31qwds9xb0lymb1cdkspk4r65rm6y7v90zrxdd6j1vij42g6m9"; depends=[affy Biobase]; }; + dupRadar = derive2 { name="dupRadar"; version="1.2.2"; sha256="1n07sr5g2hr7rgpcybcaksrihyxlgyghy5l6ldmxqdchzrz90shc"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.32.0"; sha256="0g3lslnbbqxfbbyg16is33gd4v55cvqx00bcj0ig8w3xk31lpfph"; depends=[Biobase marray]; }; + easyRNASeq = derive2 { name="easyRNASeq"; version="2.8.2"; sha256="0bmwcx8gpr3a1fl4vz41s9k5rsi4l0jivsfxwvsw1kw87py00qvl"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; + ecolitk = derive2 { name="ecolitk"; version="1.44.0"; sha256="16zsqrvbwl8ayh4x87ycnzv3iyqjixwd2rkc5xhk3ywd8khvdp0i"; depends=[Biobase]; }; + edge = derive2 { name="edge"; version="2.4.2"; sha256="168qgzszvmv9rjk999a1csvv9k27bgpjl67m9qi46y14y0mnlgmk"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.14.0"; sha256="14vrygy7rz5ngaap4kgkvr3j18y5l6m742n79h68plk6iqgmsskn"; depends=[limma]; }; + eiR = derive2 { name="eiR"; version="1.12.2"; sha256="00vzydf6nf6cql7qds5nxbw46cr5w4h02xiayi7ayg7nl54xdfa2"; depends=[BH BiocGenerics ChemmineR DBI digest RCurl RUnit snow snowfall]; }; + eisa = derive2 { name="eisa"; version="1.24.0"; sha256="0pn6ilkvnji974j9qjhvqgfh7427nxaqwjvd22mplsnr81mfrr6d"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.12.0"; sha256="1akhzdk9kczy34fczff1j420682rkbniwcjx1bqrml75jd87xz36"; depends=[BiocGenerics Biostrings GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="1.4.7"; sha256="1310n4ws68xw0ymac59w172jd61s547wl6zagzkk2zhk00bfwfma"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; }; + epigenomix = derive2 { name="epigenomix"; version="1.12.0"; sha256="0rhhnh835ah5d9hsv64i6y9hqb9yqmd15f7g4xkc7hws84jw3alb"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; + epivizr = derive2 { name="epivizr"; version="2.2.4"; sha256="0jvp08mfk05v2gmmxnbxbr825w2n75dc7jwvw88aymn0cc4bv5mf"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; + epivizrData = derive2 { name="epivizrData"; version="1.0.3"; sha256="101jn7fabzk3jkn25vn5r3g4iyjjm9qq8gdqq8wk45m0b5gglf7p"; depends=[Biobase epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.0.3"; sha256="1zzixb6gz43l9wlj4g6givax9rykb26xjx0i1xfnlwbxfl62z3wm"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.0.4"; sha256="0sd9vddihba3xwi2yjmzilklavggrwpavffbs9mhrjnh6hl62h73"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.6.0"; sha256="0f4q701yd8zghzxj6mj8ljd0h09q7f694mlm566p4867gc4iqs3c"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr QuasiSeq qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="0.4.2"; sha256="09fmys40b2vz8py69bblq7chxqwn34mcq460zqlxpj51f7d1zn1d"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; }; + eudysbiome = derive2 { name="eudysbiome"; version="1.2.0"; sha256="1pcfbx120vyxvdw7hfaqmy1snc2ksvra59kz0qi0mjimvva69hd9"; depends=[Biostrings plyr R_utils Rsamtools]; }; + exomeCopy = derive2 { name="exomeCopy"; version="1.18.0"; sha256="008dvhcha5jjawzvxknqzxgv3cp0v1nxv60ngjkqczzihac66pby"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + exomePeak = derive2 { name="exomePeak"; version="2.6.0"; sha256="1lwk5y3ma373mcr3l9cq9biq6qj7yc1lljmpa8qndwckgkg2dzl7"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; + explorase = derive2 { name="explorase"; version="1.36.0"; sha256="1aa21qgx59g8iipys9rm57ll3smjwz49wi7l2s833svd5z53amkf"; depends=[limma rggobi RGtk2]; }; + fCI = derive2 { name="fCI"; version="1.2.2"; sha256="1fhxhy6jkkly439l2sfz8mg4nknqgh167j6b413iikl2b7w9sg83"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fabia = derive2 { name="fabia"; version="2.18.1"; sha256="1hm6zlcky156zb3wppmxhkrm8xjkl12kcn8hh2kc95k6hsajc6zb"; depends=[Biobase]; }; + facopy = derive2 { name="facopy"; version="1.6.0"; sha256="0wgd05sg3h9h8v7y9kva0v6296928bbzbifdkfp2910fsjw8pvdl"; depends=[annotate cgdsr coin data_table DOSE facopy_annot FactoMineR ggplot2 GO_db GOstats graphite gridExtra igraph IRanges MASS nnet reshape2 Rgraphviz S4Vectors scales]; }; + factDesign = derive2 { name="factDesign"; version="1.48.0"; sha256="1cxyzxxz0cli21bqcsg2arcdqnimczql8d47skdwv449mxgcan9c"; depends=[Biobase]; }; + farms = derive2 { name="farms"; version="1.24.0"; sha256="06swwfjbaq2xqbkrabv4jk4xxnxkmvjpx3a0rx0mi0j7fv8i5xs8"; depends=[affy Biobase MASS]; }; + fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.8.0"; sha256="1d7y120sxh3dqfyhpc4bayplrfwvarfj31imrad3h8mpk6j7a3jg"; depends=[Hmisc LiquidAssociation WGCNA]; }; + fastseg = derive2 { name="fastseg"; version="1.18.0"; sha256="1dnlws7wv9dl5adimzmzcmhg7zlc7xrfxvbzdf86hnh6ci0wvxji"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; + fdrame = derive2 { name="fdrame"; version="1.44.0"; sha256="16dlcmn8ldh4irxbczr0pyljj98rgjz6xb084nz7gqg7w5mfdakl"; depends=[]; }; + ffpe = derive2 { name="ffpe"; version="1.16.0"; sha256="1nhi0xbicw7iglizq3kxhywmlmyxaj30c588ccaf039v9p0rx165"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; + flagme = derive2 { name="flagme"; version="1.28.0"; sha256="01andc84ls5r3pa0m63mxl3f203kf5i6z00hj4fs1c0999jyv14x"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; + flipflop = derive2 { name="flipflop"; version="1.10.0"; sha256="1pm64f58m3i4vq95s6y4kan2cw5zc70xjh1z3h6343jqn9vfpnxv"; depends=[GenomicRanges IRanges Matrix]; }; + flowAI = derive2 { name="flowAI"; version="1.2.9"; sha256="1gb3a8f4xsjwspyacdbi2h5kicsawh20dd22xnpg8nlviypqz912"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 scales]; }; + flowBeads = derive2 { name="flowBeads"; version="1.10.0"; sha256="1vvggb937iabdn9y6z81sc5vshdyi9017ivz0mf5npi09gm02xb5"; depends=[Biobase flowCore knitr rrcov xtable]; }; + flowBin = derive2 { name="flowBin"; version="1.8.0"; sha256="138h229ny5k9abclby79phlywyckgkqdkd02sdg16028amckmgq7"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; + flowCHIC = derive2 { name="flowCHIC"; version="1.6.0"; sha256="1gy7cgyy1ifn989vgkik3b633li6ir3kznhb4wh21wqvrfy9d39n"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; + flowCL = derive2 { name="flowCL"; version="1.10.0"; sha256="14z6pyjc5v5zi3l9qiz85yrbhaykyfw77vmvb4nzrvm6mdqm1z5r"; depends=[Rgraphviz SPARQL]; }; + flowClean = derive2 { name="flowClean"; version="1.10.0"; sha256="1slf34rss2l1faj2kszgaiafaj0n0wddfgrnpylav62lfricyzih"; depends=[bit changepoint flowCore sfsmisc]; }; + flowClust = derive2 { name="flowClust"; version="3.10.1"; sha256="0y5mylb09fnyk8a8bhr8g3xpzz3l8pcs7xi91gdxjqamkqi8v700"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; }; + flowCore = derive2 { name="flowCore"; version="1.38.2"; sha256="1pspsjmvc3lk06i0mrccdpmp0snpb79ng7dip4lc5rbbr9764ps3"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; }; + flowCyBar = derive2 { name="flowCyBar"; version="1.8.0"; sha256="1vj97swrfqh3v50js0hk1agfnjzdawsc0pjrvcncs3avh9awag1r"; depends=[gplots vegan]; }; + flowDensity = derive2 { name="flowDensity"; version="1.6.0"; sha256="1x9jfkv4s5l1pa4cjm5d96l1s9nvxjv8vxlkyax33h009cci4yzs"; depends=[car flowCore GEOmap gplots RFOC]; }; + flowFP = derive2 { name="flowFP"; version="1.30.0"; sha256="1nqqm0zmv9rf46dflshmhcgwi15kg0f7szljxm4l4j4vg377hc0w"; depends=[Biobase BiocGenerics flowCore flowViz]; }; + flowFit = derive2 { name="flowFit"; version="1.10.0"; sha256="0wfsg359zi7bi8wgf5zfwj3gjk5sghynsd9la5x1idsm2hfkqh7x"; depends=[flowCore flowViz gplots kza minpack_lm]; }; + flowMap = derive2 { name="flowMap"; version="1.10.2"; sha256="11fkd89rcwmzfln375p9hgv1z79ipvvhha7krz6wvi0z63lv1131"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.8.0"; sha256="071fkhwfwwabbrb1vmwwdvg96lizyf67wvf6g080qac9jsqq2xid"; depends=[Biobase flowCore Rcpp]; }; + flowMeans = derive2 { name="flowMeans"; version="1.32.0"; sha256="0z06479v8xihjyvb8y615yqkd5mkw2879z7qciwkyc32dy3kp6zs"; depends=[Biobase feature flowCore rrcov]; }; + flowMerge = derive2 { name="flowMerge"; version="2.20.0"; sha256="1ibclh3wdz07rqzri61y01ijvrrj8bjmv3l9ddlzgzs6wk07r842"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.14.0"; sha256="0ypp5qhl4wxfsbz64d7zvkk606h7wniz4s01zswv61vhygjhr8p0"; depends=[]; }; + flowPlots = derive2 { name="flowPlots"; version="1.20.0"; sha256="01gjkks9cvrjzacpynsv5i9ir4569b7q9yzfzk337xhz5r140brh"; depends=[]; }; + flowQ = derive2 { name="flowQ"; version="1.32.0"; sha256="1bf5avnjn5vg2569pyvrrsq1jv6n0sslyxm9rav2mj321smy05lm"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; + flowQB = derive2 { name="flowQB"; version="1.18.4"; sha256="15gk1nbn4yhjw7378d84y3lh4kr1p2bxdra1wfd8scz7nyd6q8kr"; depends=[extremevalues flowCore]; }; + flowStats = derive2 { name="flowStats"; version="3.30.1"; sha256="0sblxshpkw9sx16p1ni9wg6hmhdv9q5i8ssccq41rhrgnyiahacc"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS]; }; + flowTrans = derive2 { name="flowTrans"; version="1.24.0"; sha256="1ri3frs5z702scn88zrymhm8slwl4g1273yn14w065vay9gq2klr"; depends=[flowClust flowCore flowViz]; }; + flowType = derive2 { name="flowType"; version="2.10.0"; sha256="0w0zgddk89bavjhjnkjv7bmqpg2q3d9fxadll4da2dsqzg4nwpy2"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; + flowUtils = derive2 { name="flowUtils"; version="1.36.0"; sha256="1vd01iw2ki7yqq7g9islqy3z8ks6ciih7j2ja2gff31kvn95lyyc"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowVS = derive2 { name="flowVS"; version="1.4.2"; sha256="0d0xrsscnsxl3b2rm7rhvjm0rhca9x6hckxq5hvnmwdcnyswr2jr"; depends=[flowCore flowStats flowViz]; }; + flowViz = derive2 { name="flowViz"; version="1.36.2"; sha256="1b1sp46lbkdsyx43g3qxx3ggvj8hy17bg71n6l8r6gh0i39fagqn"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="3.18.11"; sha256="0i16fq30lbrjq3nkd6lkkz9c9p2azprnsjw9bm0y01wkzjlhc9hz"; depends=[BH Biobase BiocGenerics data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz scales stringr XML]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.6.2"; sha256="0p1yb5gz2zyc6g9k3jxsbllvysj65srhnj1bsh57qmk7glkda7wl"; depends=[abind BiocParallel colorRamps EBImage rgl]; }; + fmcsR = derive2 { name="fmcsR"; version="1.14.2"; sha256="07c14iix1c31axskgxf8ffwyrryxpdmsq33nwfpv20951c3n9zc1"; depends=[BiocGenerics ChemmineR RUnit]; }; + focalCall = derive2 { name="focalCall"; version="1.6.0"; sha256="16y4ry894ricj3jyq26y5kcyb90za2f7bpc8n9qxb5b69179dsdw"; depends=[CGHcall]; }; + frma = derive2 { name="frma"; version="1.24.0"; sha256="0rglkly4b0n9hsw47hznymmzk1g6c64qk12bkhfj6hcp8hg4swss"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; + frmaTools = derive2 { name="frmaTools"; version="1.24.0"; sha256="1wgybdhqvh1ip9qiqcgnsav0bdm9lspxgb611vh7nga4qlham2y5"; depends=[affy Biobase DBI preprocessCore]; }; + gCMAP = derive2 { name="gCMAP"; version="1.16.0"; sha256="0914vnpzy5kmff9d09x5bdisy01r0j482hm0jy3d7v1c0ij57psl"; depends=[annotate AnnotationDbi Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; + gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.12.0"; sha256="1ba4ayc2ylyrijym48lyrmkn2az3x42n8q0cb7snwb9wc8c4pn5x"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; + gQTLBase = derive2 { name="gQTLBase"; version="1.4.2"; sha256="1xhpxpjhnjzwwpmsm9v0jxqikl52fwaw6h8lyp6svzjwcxni863h"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; + gQTLstats = derive2 { name="gQTLstats"; version="1.4.3"; sha256="0lbhmicn47zqblnanwd8j05lnmcgmxz21n7r3fr1vj3wigkl2p77"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggplot2 gQTLBase IRanges limma mgcv reshape2 S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; + gaga = derive2 { name="gaga"; version="2.18.0"; sha256="0pp0k2gqb5ysxxgfw4551lc87rd5b5n4fxkp0c59hdiwqr2gm9jv"; depends=[Biobase coda EBarrays mgcv]; }; + gage = derive2 { name="gage"; version="2.22.0"; sha256="1hcl0ipripvkz8i9bk6vlb0qhx7mq487vay7668h4byjdxw33axq"; depends=[AnnotationDbi graph KEGGREST]; }; + gaggle = derive2 { name="gaggle"; version="1.40.0"; sha256="0xs2rblfh4wa05jdb6fjf8mgqhfwgjzbrf8gq9nsh8lgv4a8azz0"; depends=[graph rJava RUnit]; }; + gaia = derive2 { name="gaia"; version="2.16.0"; sha256="14fnwf7rizc8vp7mjbnw16ar5l21kkgggxn1rrmwpsjd321rzyc3"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.0.2"; sha256="00xpv7aqx0bh9azmpkxlpwjn0kp0wijpac9ssz9ic9chs2p9b4ga"; depends=[]; }; + gaucho = derive2 { name="gaucho"; version="1.8.2"; sha256="0w09hd7r1y41yv3fyarzrkqw3gzzqk6qplbqrdd74hz7iq4rxcqg"; depends=[GA graph heatmap_plus png Rgraphviz]; }; + gcatest = derive2 { name="gcatest"; version="1.2.2"; sha256="04il1idfisf99d7v50gpk5dscn9vs787mxw4h3ga9f5a73ii1hn9"; depends=[lfa]; }; + gcrma = derive2 { name="gcrma"; version="2.44.0"; sha256="0zvv9wqv5cxs203cfnxgvlf7xmdkcm66jx4jjdamjvvlnlbgbvd4"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.8.3"; sha256="1cvg87fzgd1fzdphxkl5vh0frbjwrghf2i4hrwgh9h9pszkjpirc"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.12.0"; sha256="0i5pbcsz1y9z75yvc7fdk7820y1hmbr28jfmvm382c43namcki55"; depends=[Biobase e1071 EBarrays minet]; }; + geecc = derive2 { name="geecc"; version="1.6.0"; sha256="11a3dlgzaagb6iyx8pa38kxv50wvb1s96m36w0azcg1z3z77h6yy"; depends=[gplots hypergea MASS]; }; + genArise = derive2 { name="genArise"; version="1.48.0"; sha256="0zyxnx2xx5ywz3cgbmkh7ay0fwgmgn320knbs8mz8bniilc2mm0b"; depends=[locfit tkrplot xtable]; }; + genbankr = derive2 { name="genbankr"; version="1.0.4"; sha256="0x6m9qa61cka549gd0fvywc63rkj2afxhgyfjmyfg4x9dxdxc670"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + geneRecommender = derive2 { name="geneRecommender"; version="1.44.0"; sha256="0hij3vx023z9wc905hhq845wya4ivapnpf5cp57vvcssxxks91nl"; depends=[Biobase]; }; + geneRxCluster = derive2 { name="geneRxCluster"; version="1.8.0"; sha256="1nrq2sfazs0zpnlh70lsnalvgqb3z8sqr3fryxqdb4vp26alddbk"; depends=[GenomicRanges IRanges]; }; + genefilter = derive2 { name="genefilter"; version="1.54.2"; sha256="1hmz6as0njvrsrdbgmk72jyclnnqvfdvp6kqv456h43ldq2ajfv5"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; + genefu = derive2 { name="genefu"; version="2.4.2"; sha256="09priw4chfy853dadylfk8h2jjwajccq4kcyjxdfycd8np02f6sq"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; + geneplotter = derive2 { name="geneplotter"; version="1.50.0"; sha256="0lvrywl0251g4y0h0qlgkbg4l83ja5544c85z1wj30qxiy77iqc2"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; + genoCN = derive2 { name="genoCN"; version="1.24.0"; sha256="1wd21qd153lnq8z69mia84ij8v9323is81njxivh4lqcrr2m0lgr"; depends=[]; }; + genomation = derive2 { name="genomation"; version="1.4.2"; sha256="017hxh3yhizlsswd2vw8504arkckrcgq5zraiw67lldq9wzs5qzg"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr readr reshape2 Rsamtools rtracklayer S4Vectors seqPattern]; }; + genomeIntervals = derive2 { name="genomeIntervals"; version="1.28.0"; sha256="0ic0h1jd1qddqg90j7i55cyjc28jqc1s1qvbjdv0xi2zfl0yfi5g"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; + genomes = derive2 { name="genomes"; version="3.2.0"; sha256="16gyr1wb822hw92cf00njkgls1i718n67zprpc9q364b9js1095g"; depends=[curl readr]; }; + genoset = derive2 { name="genoset"; version="1.28.2"; sha256="1zrng0c0yws8hlhz09gm68dlc6xk5kmjz3xxqhfg5dr56sdryg1y"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.2.2"; sha256="1asmy822hb6i02jgbx005zb7p02zladhp5zvbgi3apxy9h17fwlw"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.0.0"; sha256="1030gg9cqmzz4iwssv9y0ai42ar356w6y61aj96p3901jbq78v0v"; depends=[Biostrings e1071 effsize ggplot2 randomForest]; }; + gespeR = derive2 { name="gespeR"; version="1.4.2"; sha256="1npbfm20cbq9raq9d26biy65c1ag705k1s068yc9z6j51w4a9h8m"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + ggbio = derive2 { name="ggbio"; version="1.20.2"; sha256="167ppjb4kkxhgxmlzfcgwa7ggm6mkfg2b0z2q1iav0kc9sdy1zz4"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.0.6"; sha256="1xpavy6dcgq5zwlyi7wb0ldavqdh74bkg2plpbp7lmmn496w26n6"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; + ggtree = derive2 { name="ggtree"; version="1.4.20"; sha256="15fnkbq9jcw5n54z5vm5dj9giaxm0a8w3017gkd3klyywlcpk7mp"; depends=[ape ggplot2 jsonlite magrittr tidyr]; }; + girafe = derive2 { name="girafe"; version="1.24.0"; sha256="0qr0mv1biv6xs86sc3kv97p19kc12hvxa96mhbpw4qabbmaaadh8"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + globalSeq = derive2 { name="globalSeq"; version="1.0.2"; sha256="1hbi19i0jyg3axjgmvakdckk5hdbm6p3hxxnqh2xgnf7qwkj74v3"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.26.0"; sha256="0myg87l3aqrk03qiibzya8fx12xn7w3myizhhvbd84v86xgjl8dp"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.14.0"; sha256="034z2z2gav7nny0c9npn9h71hlq15ag866fbab7ii8rqvapy6vh0"; depends=[Biobase BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + goProfiles = derive2 { name="goProfiles"; version="1.34.0"; sha256="0m2cki0mrf874nhj390zb7i41v6a9lrr22sx2x6yq22qs6067p32"; depends=[AnnotationDbi Biobase GO_db]; }; + goTools = derive2 { name="goTools"; version="1.46.0"; sha256="15n35kp826lgp0bl91p1zxy65a7vx8ln895vqp31ss06hqlgrksf"; depends=[AnnotationDbi GO_db]; }; + goseq = derive2 { name="goseq"; version="1.24.0"; sha256="05zm23bj1i9al9bsg870pyk1r663vsv08sz9wn5dmriwv9rq2i4b"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpls = derive2 { name="gpls"; version="1.44.0"; sha256="07v0k6bsf35rkj7irsz7rwfba3fnnszy2kx6n0qzphlcgwda94hx"; depends=[]; }; + gprege = derive2 { name="gprege"; version="1.16.0"; sha256="103z7bsjqwc4d4mimaavrd46v8l0pchrahhgqkkpyjxq6ibk7krw"; depends=[gptk]; }; + graph = derive2 { name="graph"; version="1.50.0"; sha256="0ys5s19m5r30rlr0fnx2h0z2qw7n2xrad4l2yfb1bbrk8dwyf4pi"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.18.1"; sha256="0s9si7jz044nv80r0zyy4kvc0sjd8mckhnhn05bb16ym5650qg2r"; depends=[AnnotationDbi BiocGenerics graph rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.6.0"; sha256="1l9mcyzyc548114ysb9r0q7hgzw3yy7gpiahrzkzj6hblc4f1jyp"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gtrellis = derive2 { name="gtrellis"; version="1.4.2"; sha256="133wlm7807rz9wa37prjrwginwlljbyvf5j7zlslzihpfj3b1q2n"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.4.2"; sha256="1q6wfp234c2ja2k3r2m21mfgwz3dwy2ayml9vxbdhgsi496ixray"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.6.3"; sha256="0x4frfkx6l30ns686ybqqhqvxn3x8gwm5m9zbcvnk8yd864jxfwh"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; + hapFabia = derive2 { name="hapFabia"; version="1.14.1"; sha256="1fmlw49ab6b5ry7qsh9riismki8slh4kym4agpkfbdj4qjhicdwq"; depends=[Biobase fabia]; }; + hiAnnotator = derive2 { name="hiAnnotator"; version="1.6.2"; sha256="1p6w035pm6ikkf8nv1lah0055rblmj8313bjwxkqm8m5g51imz7b"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; + hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.8.2"; sha256="18iq1f6hvxi3n7bm25np8daa5bvmyayhq47w2qf1nbbl7j8vyi4z"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator rSFFreader sonicLength xlsx]; }; + hierGWAS = derive2 { name="hierGWAS"; version="1.2.0"; sha256="0gnc9cnwy9ji8r7jiy2irsikb06v044cmhpjfgphsqchaf53h4sv"; depends=[fastcluster fmsb glmnet]; }; + hopach = derive2 { name="hopach"; version="2.32.0"; sha256="15x6mrk9f0vjbddafzr8g5p3j1a7z5ws2a361nj83djnx4z7mnh8"; depends=[Biobase BiocGenerics cluster]; }; + hpar = derive2 { name="hpar"; version="1.14.2"; sha256="0rmnwrkblljlpa1d19sxjwqw6hcqx6aajl2vv8g9qlcwklp0igl8"; depends=[]; }; + htSeqTools = derive2 { name="htSeqTools"; version="1.18.0"; sha256="0n05bsqxmji335nkfg7a38i91k8nf7mf1vkhi8mg6mags7sqysl2"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; }; + hyperdraw = derive2 { name="hyperdraw"; version="1.24.0"; sha256="1bng0b48blj3mmga799j2103lwdnrh1shbp0jjczzyrhh8l30xby"; depends=[graph hypergraph Rgraphviz]; }; + hypergraph = derive2 { name="hypergraph"; version="1.44.0"; sha256="10vyxw05a6asyvphzxdv10fl437nqwxcy8z2maqijxhhkrq91mz9"; depends=[graph]; }; + iASeq = derive2 { name="iASeq"; version="1.16.0"; sha256="0ggcpygyf4x39ky1y0p7f67i0knnhrmpab20gcf5cs5239l1k369"; depends=[]; }; + iBBiG = derive2 { name="iBBiG"; version="1.16.0"; sha256="1776i6jsgfhwmbzflx487l7aav5a9xa5v3md6wzwkalmq4vz1h0s"; depends=[ade4 biclust xtable]; }; + iBMQ = derive2 { name="iBMQ"; version="1.12.0"; sha256="14rmnzzq5ix2in0hhz36nzixvm51jgsrhrzp28767vfrw3d59dqn"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.0.0"; sha256="035i02mi92kqsrn1n81j7bqxzf1czra4fdrfya0ihjyvjl363hsx"; depends=[]; }; + iCOBRA = derive2 { name="iCOBRA"; version="1.0.2"; sha256="16f7vdlwnnlk73lwi3y5yvcb5ww9qkc6ynyyafi73a4mj4vyiw0x"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; + iCheck = derive2 { name="iCheck"; version="1.2.0"; sha256="16rr1l1s0kbhk8xhbr4cac0xb7sd9p92y9dm8hyi5hd65w3yryzc"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d vsn]; }; + iChip = derive2 { name="iChip"; version="1.26.0"; sha256="1271033d2rfj4ib50955rk3bspj78h1aslmf8pkfbmb2y1pm1jz9"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.8.0"; sha256="1ryalbvf24pd2lk3brxy6zb616n5sfqn484lxgsl04mb8k4qppzd"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.2.2"; sha256="0p8nhybxn82c82i6z7hy4ddlnkrw5r3zsal67wkvbxw40h0ljpmx"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.16.0"; sha256="0qh1fikcqkl2hxqfkgxy16nlzqnqkkpz93b81kbpj1bgb4y3amnm"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSeq = derive2 { name="iSeq"; version="1.24.0"; sha256="0sbnnr0mcnidvk3bb303a3i4n5f5lf3c2p3rnaj1m96msfjfhfmw"; depends=[]; }; + ibh = derive2 { name="ibh"; version="1.20.0"; sha256="1fx1bb14z0is1zbarxy3bd7ynrlxf97z2501k2ajq5c5ijm05kkr"; depends=[simpIntLists]; }; + idiogram = derive2 { name="idiogram"; version="1.48.0"; sha256="0p0ji1yqp8ygzm8bqdq5zw73rw1n5c9y104k2bnf90vp9q8428kr"; depends=[annotate Biobase plotrix]; }; + illuminaio = derive2 { name="illuminaio"; version="0.14.0"; sha256="0vywygdg57msqm1a9m5ld40rf06fir686gc0h5ygs9gcs2rm7979"; depends=[base64]; }; + imageHTS = derive2 { name="imageHTS"; version="1.22.0"; sha256="0rrjwf1yfdln7xwsizssjfavr4dwmdm1bwys09bk8ja63d5s9zb5"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; + immunoClust = derive2 { name="immunoClust"; version="1.4.0"; sha256="144nhjg6r3jjn7ws0gqfhzsfhkx4b2azvijrjqndr958bip81qnr"; depends=[flowCore lattice]; }; + impute = derive2 { name="impute"; version="1.46.0"; sha256="0v9ibgv8kp8il52miz7b7z65mv6irqxylx6lfzkxgvxd970dgrz0"; depends=[]; }; + inSilicoDb = derive2 { name="inSilicoDb"; version="2.7.0"; sha256="14sv2rwfjv3h5l9qxd4c1wc83gfghmwbwds92g4wfvflbda9i6g8"; depends=[Biobase RCurl rjson]; }; + inSilicoMerging = derive2 { name="inSilicoMerging"; version="1.15.0"; sha256="1dvbkjn5pj6w6ixrkvljbz843dsmihcnhbs6vm6a1iyc2l6dx41k"; depends=[Biobase]; }; intansv = derive2 { name="intansv"; version="1.10.0"; sha256="0fgc45gaqm2vpvcbvwm54w93i7fmp4pv365pqqcq6sy3lilzxn92"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.8.0"; sha256="0gkjjdx20438hnbs6hhshkx0k4ja2xci0mcg2qcbgg0ajsi0zx86"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.8.0"; sha256="1zibrbykz45w04xn9c0fc65jjqcg9dqzlpac248ry4hqfw21yxw8"; depends=[BiocGenerics shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.18.0"; sha256="05jwxwjyvkilfmygf16k3d55ma7s1ya7lyxh8v4pd8gql7v3kllq"; depends=[haplo_stats]; }; - iontree = derive2 { name="iontree"; version="1.16.0"; sha256="1pamgkg85qi3iqqws7a3l8lph428alz1dzf08x309njqz8cbzw91"; depends=[rJava RSQLite XML]; }; - isobar = derive2 { name="isobar"; version="1.16.0"; sha256="1awi1z5aljmagxyrj3xfw0j24r8acrq0vrq691jrfjx625aqq81n"; depends=[Biobase distr plyr]; }; - iterativeBMA = derive2 { name="iterativeBMA"; version="1.28.0"; sha256="0y9api2dibn5n0yqvyc2xag4xlzxq0h9sdf29ri9v1kfvpgksn9y"; depends=[Biobase BMA leaps]; }; - iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.28.0"; sha256="02g355bmjf1lcdkgr62a8sf2vckmdziia45w5gh4mmyf5hk4w9fi"; depends=[BMA leaps survival]; }; - jmosaics = derive2 { name="jmosaics"; version="1.10.0"; sha256="1q67ylrgc2abny2wxgsl1cni225inar1dhim0psrbrf5ik77kgmk"; depends=[mosaics]; }; - joda = derive2 { name="joda"; version="1.18.0"; sha256="0fjbxczwkn8f4p0h8dgi3vfn4qf9a650wmp01q20j7f0jsmmb06x"; depends=[bgmm RBGL]; }; - kebabs = derive2 { name="kebabs"; version="1.4.1"; sha256="1fqvp17x6z7hpgh4z71npvvskhd4j68g3p67ifc8phrmlqyaa84d"; depends=[Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; - keggorthology = derive2 { name="keggorthology"; version="2.22.0"; sha256="1sl0h63f3vvydbbj90hp5arswr6mzj5xlhqa6wbj3jhyq169qi5x"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; - lapmix = derive2 { name="lapmix"; version="1.36.0"; sha256="1ambwxc4j6y959ww48s09pyrf4v1fghv6grybmy41vhczqvqhkdx"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.0.0"; sha256="1snzfyfvji26n5j9jl9ib9wj7m8aln187zchpv182szrivqd1yqc"; depends=[Matrix snpStats]; }; - les = derive2 { name="les"; version="1.20.0"; sha256="0dgajsws35qg1x5i12hnp0p3qixq6nqsxm16qws93vhvgmnl540a"; depends=[boot fdrtool gplots RColorBrewer]; }; - lfa = derive2 { name="lfa"; version="1.0.0"; sha256="1lxirjinq6r3g749li0m8llrv195q9kjcwmd9gyvk84i570nliy9"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.26.8"; sha256="0pw91q8ahjzagyx7p564z812lczvbbc6m4mymwn30di8xv1vd3mv"; depends=[]; }; - limmaGUI = derive2 { name="limmaGUI"; version="1.46.0"; sha256="14avwg48kf0m203yzlz69nbn2zcw65v70d6lkf65ahkl3rapij1h"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; - lmdme = derive2 { name="lmdme"; version="1.12.0"; sha256="102v67asih0czi8yrc9v859dwfb2c3s14qppcjdif6b04xs92pgv"; depends=[limma pls stemHypoxia]; }; - logicFS = derive2 { name="logicFS"; version="1.40.0"; sha256="10c154jy6lrycsnk8912572m5hjv2ngf2q3gr1wmavyan4bsqwvd"; depends=[LogicReg mcbiopi]; }; - logitT = derive2 { name="logitT"; version="1.28.0"; sha256="1qbimjjl5xv5h30r74bd86dg10djajb01qav6gp95l6f59fx2j1q"; depends=[affy]; }; - lol = derive2 { name="lol"; version="1.18.0"; sha256="0dc3ga7yalzfngh3y33sa4bchhbxgndkls3vdxh4yzcsdvk60i1f"; depends=[Matrix penalized]; }; - lpNet = derive2 { name="lpNet"; version="2.2.0"; sha256="0sscs69mwzsz8bifgkmaa08zms6vqqls727p8gz4zq79nlw726yj"; depends=[lpSolve nem]; }; - lumi = derive2 { name="lumi"; version="2.22.1"; sha256="0c1vzplvjk6b9p81cj76vs5rp33swdp0m142hwbw4jfw46rx0aqq"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; - mAPKL = derive2 { name="mAPKL"; version="1.2.0"; sha256="1k1yxxj6371sagiy63fl1dh8d71cqg6gvx8pkjy3ahp1hbh45b6l"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; - mBPCR = derive2 { name="mBPCR"; version="1.24.0"; sha256="1n9s75jx7pkq8vsq2ycyfgnk5mrfx3lr0ykp486ns8xmas3yyn3c"; depends=[Biobase oligoClasses SNPchip]; }; - mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.4.0"; sha256="0flb1lqsq7ldicidag20icnhmds2qr85yrbjsv4h06klggq2vjvg"; depends=[GenABEL MASS outliers qtl]; }; - maCorrPlot = derive2 { name="maCorrPlot"; version="1.40.0"; sha256="1chv95b3fi1jiy7nbxfj4szhjqm1ycb3xarjrd20xln5msainf7h"; depends=[lattice]; }; - maPredictDSC = derive2 { name="maPredictDSC"; version="1.8.0"; sha256="08wb622jp98xnqx8hh09n98ln8ifc21c0bc5gah5y68ldmg0x2iw"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; - maSigPro = derive2 { name="maSigPro"; version="1.42.0"; sha256="06a69r685qpjyi49yq7lw444533m9hhqb56fpki2w0067wh6a54m"; depends=[Biobase limma MASS Mfuzz]; }; - maanova = derive2 { name="maanova"; version="1.40.0"; sha256="112hbyfw18dshshsmbaylwra169w6bbwwqql3d96s0in1fl20mdl"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.44.1"; sha256="061y6a1q7c9r9a01hy6l86wc085f530y7hjw7asx506cf91ifwdk"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.44.0"; sha256="161vs8jbc711n9x67i31818a3nzjp74rm3dw20aqrhfbikvi9r7g"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maigesPack = derive2 { name="maigesPack"; version="1.34.0"; sha256="08pszyq03f1vjgirq0zcv31m4c0acdbfh622qiw0x0w1gz6plm0g"; depends=[convert graph limma marray]; }; - makecdfenv = derive2 { name="makecdfenv"; version="1.46.0"; sha256="0ca7hc4apamg8i2b8fb56mchksw26jj139clq3vxw6nl4ny9ipvg"; depends=[affy affyio Biobase zlibbioc]; }; - manta = derive2 { name="manta"; version="1.16.0"; sha256="0j6zll7b1qqdnydg59hywargw6bivry3cx5m2wpj79wn673kib3c"; depends=[caroline edgeR Hmisc]; }; - marray = derive2 { name="marray"; version="1.48.0"; sha256="103nag8ygjyw8p9v94y2c6lgiynbz2x4s6i71l7ydv2ipfr6b2fb"; depends=[limma]; }; - maskBAD = derive2 { name="maskBAD"; version="1.14.0"; sha256="18lvg85ss29wwxb60a2nwpc1v7d7cdl5al2wki1c0d770f7b232r"; depends=[affy gcrma]; }; - massiR = derive2 { name="massiR"; version="1.6.0"; sha256="1wfvzx2ysl2hlcx4nlzfw5lb4bal6ysmyzf6gw3y4023dyrlzb64"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.12.0"; sha256="1p92c8vp9c65g8qzb3jlz7lniizpkymry1mh4p7izclf5mrrwk3s"; depends=[]; }; - mcaGUI = derive2 { name="mcaGUI"; version="1.18.0"; sha256="0rxhs059z0l6lal33m78hkp73k46c2pdy0nn5lxwxr590fglvh0f"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; - mdgsa = derive2 { name="mdgsa"; version="1.2.0"; sha256="05lqj7d4464z976w4rvnzpv1abihq1fpxhcl2zyg5izwqpq6ga9r"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; - mdqc = derive2 { name="mdqc"; version="1.32.0"; sha256="1aaria9nm9b4bl6r4lx0icjb20zrxcc0g8bj9jn2d04s8bzihmjw"; depends=[cluster MASS]; }; - meshr = derive2 { name="meshr"; version="1.6.2"; sha256="1gpdfgzxcaz0m2a6aji7zmr7bymdh7h4cd5agcwl3ip3lzsj76nb"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; }; - messina = derive2 { name="messina"; version="1.6.0"; sha256="039409wfdbv4hcj4zif581dy03l1wqg7nr1g8yc7ispqwpxnhwzf"; depends=[foreach ggplot2 plyr Rcpp survival]; }; - metaArray = derive2 { name="metaArray"; version="1.48.0"; sha256="1zx9ymjqh851r33jv7fpyy4319fqi2kgjgxxbgpq1xl6cfkglr4h"; depends=[Biobase MergeMaid]; }; - metaMS = derive2 { name="metaMS"; version="1.6.0"; sha256="1kkxx5hvjkljzrdq6g00dzw0k8y15h7q2fa9j8899jvq9p11yyiq"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; - metaSeq = derive2 { name="metaSeq"; version="1.10.0"; sha256="10nx4jr2mwk5zw6mag0j6v2rnn6h0pnp97pdmmsz8fgkx6245ygm"; depends=[NOISeq Rcpp snow]; }; - metaX = derive2 { name="metaX"; version="1.0.2"; sha256="1mqxwb4p1mw5821apyqb22vq2f091n95yar4x4h6cf1h3jxglj12"; depends=[ape BBmisc boot bootstrap CAMERA caret data_table DiffCorr DiscriMiner doParallel dplyr faahKO ggplot2 igraph impute lattice missForest mixOmics Nozzle_R1 pcaMethods pheatmap pls plyr preprocessCore pROC RColorBrewer RCurl reshape2 scatterplot3d SSPA stringr VennDiagram vsn xcms]; }; - metabomxtr = derive2 { name="metabomxtr"; version="1.4.0"; sha256="1zwqz9yl154c3h7qhrmkf2zcvzi2azm1sdkvrpyxg7zjks3bmyz8"; depends=[Biobase Formula multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.2.1"; sha256="1l0zfhk4gnm3gvy24igismpb3j3m6vh4mb4q41cfrpkmxn2zlvaq"; depends=[BiocParallel DBChIP GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges muStat R6 Rsamtools rtracklayer]; }; - metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.0.0"; sha256="1lbb505s976j2jxxi7snhd1yahcs0ca9qnicq12b5jmp3ki1br9k"; depends=[Biobase Biostrings dplyr lattice lazyeval magrittr RSQLite ShortRead stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.12.0"; sha256="0bqxm37ds9a5dibzlxnbdvvqcyzwxxnnw7i6a04g84k885zzxr3a"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; - metahdep = derive2 { name="metahdep"; version="1.28.0"; sha256="1vl87mc4yl3il9hmsybbwjga610p3lh5717n4csjyaywskqa1ixk"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.10.0"; sha256="1gy5ywrxqwd8lizbj9lk6qck6zwk670j5y2f0ayz6xvkki4vab97"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; - methVisual = derive2 { name="methVisual"; version="1.22.0"; sha256="1kcqhlv0lmr7wlkxjl9qqv2676pwna3i4w5xpm4inwgcb892zgjm"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; - methyAnalysis = derive2 { name="methyAnalysis"; version="1.12.1"; sha256="1fl07k42j292cjr6vgwra84zhwpkaygjr7pqbkiq0abi29ifgw7i"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer VariantAnnotation]; }; - methylMnM = derive2 { name="methylMnM"; version="1.8.0"; sha256="1jj6s6pr3hih31n98jsgil3k7n19n5ab4rylfmfnzlbgsdmnw4kq"; depends=[edgeR statmod]; }; - methylPipe = derive2 { name="methylPipe"; version="1.4.5"; sha256="013rrdm7nx9m9g0ym0j1cvzrgplw149ivsrfcjfylxdjgwvw61yz"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; - methylumi = derive2 { name="methylumi"; version="2.16.0"; sha256="1glp1p7jvnsqarpw92nha6hrrhalh5wm262imwmpbfiik7glp217"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - mgsa = derive2 { name="mgsa"; version="1.18.0"; sha256="1qdjl9cfyi2fmfm3nlzhp9wdpmvagddvb2cwy6j1pynbx03m55gl"; depends=[gplots]; }; - miRLAB = derive2 { name="miRLAB"; version="1.0.1"; sha256="0mkhrzlpf65kc3vwxlc2ckymaziqwxdc0q2rxd77ajdblbccbg59"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; }; - miRNApath = derive2 { name="miRNApath"; version="1.30.0"; sha256="0syi2kc6m9zhqaxhzj9h9micnracjj3yfgs8r5zlhs9hdp14jspi"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.4.0"; sha256="04ag91k3xa6gcmlgi2fr00p5247syn856n6jp3fhwhcn5pf5zd8y"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRcomp = derive2 { name="miRcomp"; version="1.0.0"; sha256="1a0h7qx7b4ccry5xmgh6fwqandi9lhgnlf0gk1zj6dy9zbkiwhvl"; depends=[Biobase miRcompData]; }; - microRNA = derive2 { name="microRNA"; version="1.28.0"; sha256="14l7fjvapswyk8y690xll3w1yalwl5sqqh8v8xp5xy9qvb3qgiiz"; depends=[Biostrings]; }; - minet = derive2 { name="minet"; version="3.28.0"; sha256="16hddd2agqldpfjc4bxa1wm58pczni8b4d8kc09bx2dk5rr4bcg7"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.16.1"; sha256="0ddqkbgxrfiijz5xzjb566xwvzrwljjhfhylqzhmz8fnrvqydid8"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust mixOmics nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; - mirIntegrator = derive2 { name="mirIntegrator"; version="1.0.0"; sha256="004cy2l4li55nd8n4facfk30ndhm1vdxkdsk4zywg14hmn95ldgv"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.4.0"; sha256="1hbh99ix20909f4mpc3czh8jyj970gi4bj04fcvra6fd8n40w1b4"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; - mitoODE = derive2 { name="mitoODE"; version="1.8.0"; sha256="1rbxppzwmlrfyzcsa5b0biqm79qyv9662dh16zzp3frz56325kzy"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; - mmnet = derive2 { name="mmnet"; version="1.8.1"; sha256="0ppcy11xnn593xig8gwz79vsbkdi3f5aai58zdhr59w52y2dafia"; depends=[Biobase biom flexmix ggplot2 igraph KEGGREST Matrix plyr RCurl reshape2 RJSONIO stringr XML]; }; - mogsa = derive2 { name="mogsa"; version="1.2.1"; sha256="07jm5avdhan9mn0pdaq6vhxx7xaibs0sylnc3hfpns84d8rsf65b"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="1.4.0"; sha256="1g1f5a433pq0zdjc9ymgbpdbxvixqjlkdm10vqs6gf4r511a3k76"; depends=[Biobase BiocGenerics cluster combinat fastICA ggplot2 HSMMSingleCell igraph irlba limma matrixStats plyr reshape2 VGAM]; }; - mosaics = derive2 { name="mosaics"; version="2.4.0"; sha256="13vl1grn08qy64971wimmc1j117l7fzxpcwnvaz0j5020m5m8qq7"; depends=[IRanges lattice MASS Rcpp]; }; - motifRG = derive2 { name="motifRG"; version="1.14.0"; sha256="1v9zm5629k2lcqbbgw8bwflvbircyxkfavbkvmbd212kgwcng8vn"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; - motifStack = derive2 { name="motifStack"; version="1.14.0"; sha256="13s1y5xzkaapd53i33f8vdkdl5r4b8jzdyqrydanx35sgwn7fj1c"; depends=[ade4 Biostrings grImport MotIV scales XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="1.0.4"; sha256="1mwa070iqvq6qc0igvy5aivnqbipai1grccf1vz80al44pfx1w2v"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; - msa = derive2 { name="msa"; version="1.2.1"; sha256="0lj5x3zh5vp6j9s3h77iq0awy9v5n453hbqf3k8pasj6l5x0dmyj"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; - msmsEDA = derive2 { name="msmsEDA"; version="1.8.0"; sha256="0y9k03mpq5i6sa8dngadgcxi02ggka7n1rz54mll012gs6fzvyra"; depends=[gplots MASS MSnbase RColorBrewer]; }; - msmsTests = derive2 { name="msmsTests"; version="1.8.0"; sha256="1qkg7rhvfgpkq8v1avwffqc2v6afijwzw1myd17llmj6z8iyhy6j"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiscan = derive2 { name="multiscan"; version="1.30.0"; sha256="0nl1pjg1x1rdfhn09c9nk96swsw3gph7bnd1lfj87024b4w1r50p"; depends=[Biobase]; }; - multtest = derive2 { name="multtest"; version="2.26.0"; sha256="1gpq2adj177fn8xf7gpiiq8khmcln90xif413j1fzpwjmjpzpb1v"; depends=[Biobase BiocGenerics MASS survival]; }; - muscle = derive2 { name="muscle"; version="3.12.0"; sha256="1bcyi2n1mpnp7b54lxj8g03rbjrawyr3isn211rb5m7r8jzpdvyw"; depends=[Biostrings]; }; - mvGST = derive2 { name="mvGST"; version="1.4.0"; sha256="1yi8558lkqfrmxgighb5v8q12gwqlbs2ds610fgf8ggrdn84bzq8"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; }; - mygene = derive2 { name="mygene"; version="1.6.0"; sha256="0przfr6y9svkj9dbih43hpi69wzs07r15q7w233pnmm2qhxylkf4"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; - myvariant = derive2 { name="myvariant"; version="1.0.1"; sha256="1xby50zw1250nvqbki1xccjcri8qz286mdzrm3fzfv63i8g4xwjq"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; - mzID = derive2 { name="mzID"; version="1.8.0"; sha256="1250kd8lrl4hnh8mvbl5hqbcszg3nynssdvjmy12wf0y0r9gjm8x"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.4.1"; sha256="189dsr69p0yxqm9lwhqxd9i24f45hqywp8ncx535znv2dhs8v1rw"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; }; - ncdfFlow = derive2 { name="ncdfFlow"; version="2.16.1"; sha256="0r968wix53rwwqx60gl04a46c1pwfydi80gixbx147zv8lxmc5cx"; depends=[BH Biobase flowCore flowViz Rcpp RcppArmadillo zlibbioc]; }; - neaGUI = derive2 { name="neaGUI"; version="1.8.0"; sha256="1xms5k8zzbk31sj0f92rsqjv40vcqy89pmy8z3j0336iascqbx9l"; depends=[hwriter]; }; - nem = derive2 { name="nem"; version="2.44.0"; sha256="1bkq622jyrfn0v4wyw5ycxmri8kyils4wznsz26ki3awff34lq3h"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; - netbenchmark = derive2 { name="netbenchmark"; version="1.2.0"; sha256="10s8xsisjp9sj9dl67bgn94ipm6a6kpqli3pvjdpxkmvjkg400kg"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; }; - netbiov = derive2 { name="netbiov"; version="1.4.0"; sha256="1h3986kfi516xlw675cq901ls9v7rj5rr0ls5lny21wd439n2avf"; depends=[igraph]; }; - nethet = derive2 { name="nethet"; version="1.2.0"; sha256="1p214bgjccigsvqcr0kv0ckv00zvkkpk2pfh9xvcb4kp6biqs94j"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; - netresponse = derive2 { name="netresponse"; version="1.20.15"; sha256="1mh3b5gjyh6nqif9qc45yy703vi4a4hi0szl6y6aazxd6fjqy98s"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; - networkBMA = derive2 { name="networkBMA"; version="1.12.0"; sha256="0zkf10iqiabsln1jxq0sypr43mrw6k82l3pdp5bg9kcv0bqqqy5k"; depends=[BMA Rcpp RcppArmadillo RcppEigen]; }; - nnNorm = derive2 { name="nnNorm"; version="2.34.0"; sha256="1wb85z0r0rwgaf1yzzlj1pcbgclz2isz9whxsify9jx8gfqflanh"; depends=[marray nnet]; }; - nondetects = derive2 { name="nondetects"; version="2.0.0"; sha256="0cyp7f90w9vcgwkg0mxrrpv28wihsgbynhq5kjk5hng9qfqjcyxg"; depends=[Biobase HTqPCR limma mvtnorm]; }; - npGSEA = derive2 { name="npGSEA"; version="1.6.0"; sha256="1vd02qwqv5rdkixi5ncqsxxy7zvr8qi4d6cms11fzwcmhisi1s4c"; depends=[Biobase BiocGenerics GSEABase]; }; - nucleR = derive2 { name="nucleR"; version="2.2.0"; sha256="0zhflv4nkn9dc2bdl81j9mjww6nh1mj6ffffy9cywvxzgpp2lc50"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - nudge = derive2 { name="nudge"; version="1.36.0"; sha256="1px6hnda7hp7yx9imkl8xq8m772csd2qic0kq5bqwshk5qdvfhw7"; depends=[]; }; - occugene = derive2 { name="occugene"; version="1.30.0"; sha256="0p6pk7v75b4pbyxs1pglbsfprk4yi854d8aw41a1lwbmaphx5yyc"; depends=[]; }; - oligo = derive2 { name="oligo"; version="1.34.2"; sha256="0cv0vl8cj9n3la6n55qqlncyaxv072n6sdx8gp65prm6myp3ycgw"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.32.0"; sha256="0gm4z4pa1hyrd9bdzncmkfhfywp3622wnyvhayhw7h17dw4gw94j"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicade4 = derive2 { name="omicade4"; version="1.10.0"; sha256="1ay1jm0r8qyr9271l1aqnvm800pagd3j21m37qlv6xfjvv4j6w5f"; depends=[ade4 made4]; }; - oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.36.0"; sha256="0r5y531y4niy9gh64n7nk8a0xcj8lyg36axhcjx116ycsqa00x5h"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; }; - ontoCAT = derive2 { name="ontoCAT"; version="1.22.0"; sha256="03vy4210m31jzhhhbhw3ixhm1lji4qil2zp0ckmyh3xb8m8s8fzl"; depends=[rJava]; }; - openCyto = derive2 { name="openCyto"; version="1.8.4"; sha256="1g23qia1ah2rjvz6clc9jfpb1sql2g1298bd8lard293ryvwpnhv"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - oposSOM = derive2 { name="oposSOM"; version="1.6.0"; sha256="0wdh40477hn2875j0q4nj0l0h210jym4j642lkjlx8zvdx9jra29"; depends=[ape Biobase biomaRt fastICA fdrtool igraph KernSmooth pixmap scatterplot3d som]; }; - pRoloc = derive2 { name="pRoloc"; version="1.10.1"; sha256="1k9249g46gf6ar3q44zrg8v1lqxl81rljmn0c107rxck0rvdwaxn"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class e1071 FNN ggplot2 gtools kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="1.4.1"; sha256="14wmmhrdm5fgw8smxgdadd49ggaqnnqw7p65xn0kkj6yk87h3xrx"; depends=[DT MSnbase pRoloc pRolocdata scales shiny]; }; - paircompviz = derive2 { name="paircompviz"; version="1.8.0"; sha256="0q5saqpyfjx37d6l6vqfiws8n4axarfvb1qr010a3davhdz4kzn8"; depends=[Rgraphviz]; }; - pandaR = derive2 { name="pandaR"; version="1.2.0"; sha256="00wkzhkghzy04pg5qxgd2gmcmqgri20vgw8m08yfdymb918zgvyk"; depends=[igraph matrixStats]; }; - panp = derive2 { name="panp"; version="1.40.0"; sha256="0fmi5j7xr2720548k36njjk4ad4szma3zbqig4ghd1x2gg94wh7n"; depends=[affy Biobase]; }; - parglms = derive2 { name="parglms"; version="1.2.0"; sha256="1n1q838gv45daji04a0m0wc92a3xwhgf4asl7wbirk198ra3q7pj"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.28.0"; sha256="1srs2qyp7lwq9w19izszg3n9q0mlj634zlksb796v7608yp0y643"; depends=[]; }; - pathRender = derive2 { name="pathRender"; version="1.38.0"; sha256="0bc9xy1hka79bq0zw1faalsl89aibf7d77i7gv9jnmh66li9g1pa"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; - pathVar = derive2 { name="pathVar"; version="1.0.1"; sha256="1ixraifr8d86m9rdg38d6kfzmgghjxasgi3abb1i8knjyfwrc05v"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; - pathifier = derive2 { name="pathifier"; version="1.8.0"; sha256="08ipv1xcmxdb9g8h4dh4c7icwfp4myd9gwacb3cbl48libl459wj"; depends=[princurve R_oo]; }; - pathview = derive2 { name="pathview"; version="1.10.1"; sha256="0mpr9fqfp3ar927m6rvghn6ggbxp2ll2a9jfrz9ic44mbwpa1lb1"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.4.6"; sha256="170gm5qxlsz2dv249q16shpj0xm9y7rp3rpn9ij6r2c5d3xn8i21"; depends=[data_table httr igraph plyr R_utils rJava rjson XML]; }; - pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.14.0"; sha256="1w0cpakxlm8dx6z3j844xmkz3dawiaschrjcjlkqjv9ay8vfkhz8"; depends=[AnnotationDbi Biostrings ellipse]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.60.0"; sha256="090bgl178zxj89d0kshwl5jkz8qszgdbwrfdbbawg8ka48bilw2l"; depends=[Biobase BiocGenerics MASS Rcpp]; }; - pcot2 = derive2 { name="pcot2"; version="1.38.0"; sha256="1ycsbry5srf1msq4vcvv0q34lgzkwadh7k1pgwv963i567i4lx3b"; depends=[amap Biobase]; }; - pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.34.1"; sha256="0dp1723hfkx0pc76b5xglqkxgvsh2iqqmx3sy9kyv7qcqgida14r"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pdmclass = derive2 { name="pdmclass"; version="1.42.0"; sha256="1f4zrxbyk49hm0cxp0g1786cwc7g1k5z6v3hn2z66m7rbapz8afy"; depends=[Biobase fibroEset mda]; }; - pepStat = derive2 { name="pepStat"; version="1.4.0"; sha256="0ys8nq2f5ajir4k8gdm02p26vzbhhk88ys8zc7zsqim3v4pxgdis"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; - pepXMLTab = derive2 { name="pepXMLTab"; version="1.4.0"; sha256="1fgq8x6c3lml12a92ihrkkvaph1xh90i01h15k42aadh3725a5nw"; depends=[XML]; }; - phenoDist = derive2 { name="phenoDist"; version="1.18.0"; sha256="0kjsdgvr5kmrnn7mjzphk5r6irgjv5cfgmrd4yddprbmmln39avn"; depends=[e1071 imageHTS]; }; - phenoTest = derive2 { name="phenoTest"; version="1.18.0"; sha256="1lgxacph4mv0z8c17lx4f82nvq151ggsfv5f9p35aw9z1pc10pwg"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; - phyloseq = derive2 { name="phyloseq"; version="1.14.0"; sha256="0h34ac577d2lzh6rzbvwz04ngp3v4c728z0nzf646ab10nfk1i17"; depends=[ade4 ape Biobase BiocGenerics biom Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="1.10.2"; sha256="01ql6x020ai8aj6x89bsxixvv4q4fxsnyv87kxaw4p1hxcxqvybp"; depends=[Biobase BiocGenerics gplots igraph marray relations]; }; - pickgene = derive2 { name="pickgene"; version="1.42.0"; sha256="1awm471s2mx4w7m2p2bdz67rbgyz0khsa85bbrjcb4lbvljqwdv7"; depends=[MASS]; }; - pint = derive2 { name="pint"; version="1.20.0"; sha256="19q21b3zdn4adx49zn88z69xz3mqza58xdhig3zicn9s0g21bfz4"; depends=[dmt Matrix mvtnorm]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.36.0"; sha256="1v2fsax49wklwdmgxp9pjyp18cbj2rsg7yd68mwr2amlihgvmsp1"; depends=[graph RBGL]; }; - plateCore = derive2 { name="plateCore"; version="1.28.0"; sha256="1v7shvjnav930grswbixj8fyabmamsgry5g5is3sf9ymp9r8gh5x"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; - plethy = derive2 { name="plethy"; version="1.8.0"; sha256="1skaqws1yb8n8li4daprq4x8vrbyykm3fk6pzwx7iyr3nf2r2zz5"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; - plgem = derive2 { name="plgem"; version="1.42.0"; sha256="0nbiv4zbfiwa9mkpa2ldhnj3bi5nyrqcrzx1b54fcxsndrj9106i"; depends=[Biobase MASS]; }; - plier = derive2 { name="plier"; version="1.40.0"; sha256="0jlrxv79yg9w8yqlqqmswcrpk0ddw811qg142vbpd1alib35wrxi"; depends=[affy Biobase]; }; - plrs = derive2 { name="plrs"; version="1.10.0"; sha256="1f2dlgcbpfrn5za2z7nf1y8jzrcb5hzb3gix18nyqmz9syg57zha"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; - plw = derive2 { name="plw"; version="1.30.0"; sha256="190bccvxhdgp3ah9vzdpjddb33ck38r5x4gw1f8vwxh0mw79vf9c"; depends=[affy MASS]; }; - pmm = derive2 { name="pmm"; version="1.2.0"; sha256="1rsyh05w32gk2sip9hx1q93hwqwb1kmns47aq8qj2dw26ii0is3c"; depends=[lme4]; }; - podkat = derive2 { name="podkat"; version="1.2.0"; sha256="168piyx6c6vif771adm4594h6dq2h14g3jfk8lj2fvvdwyms2dn8"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; - polyester = derive2 { name="polyester"; version="1.6.0"; sha256="0if2rbgbfc3ghz5mnmpmpv6rq63qjm3l16gmlr493vfrpxdzclnv"; depends=[Biostrings IRanges limma logspline S4Vectors]; }; - ppiStats = derive2 { name="ppiStats"; version="1.36.0"; sha256="1s5xv565w924g71qaxgmhfszrkqs3arzi8l0vzcz446r2pgm6d32"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - prada = derive2 { name="prada"; version="1.46.0"; sha256="0ak21586bbkbpwji1pcbr44dlwyhslscrqm2y172310xbxm0sqbg"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; - prebs = derive2 { name="prebs"; version="1.10.0"; sha256="06rbsza5gdv9k9hcaxx0k65p9w61kfxiw0p4ah23dqfx0mldh5nx"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; - predictionet = derive2 { name="predictionet"; version="1.16.0"; sha256="1q7nl11kvh2rl5rzb4qnq5ckdrdkna0arfnjmki35lr8hyh65id0"; depends=[catnet igraph MASS penalized RBGL]; }; - preprocessCore = derive2 { name="preprocessCore"; version="1.32.0"; sha256="07isghjkqm91rg37l1fzpjrbq36b7w4pbsi95wwh6a8qq7r69z1n"; depends=[]; }; - proBAMr = derive2 { name="proBAMr"; version="1.4.1"; sha256="1lk3jq113hpx315kmq0s9ll1m7x1s91gwdzm3db06509wp5ki881"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; - procoil = derive2 { name="procoil"; version="1.20.0"; sha256="11ss88jfk1j2b29l43qlvrlmhgxlfv1dw8wd9sqy3z3figspr3wz"; depends=[]; }; - prot2D = derive2 { name="prot2D"; version="1.8.0"; sha256="0pmsl550wvxnqx5zbj8b6lhvlb2bcmvi3xxx66x8r1sz3cdy3l7h"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.10.0"; sha256="0hkimlq3v8hq3khinydm4m8v5fgld74vc6yg9yzhz71hv1yy2i2m"; depends=[]; }; - proteoQC = derive2 { name="proteoQC"; version="1.6.0"; sha256="15raykmw19k4yn4jppw4lqwgarr8b7sfsvhcif49xvw7k1dwj5ys"; depends=[ggplot2 MSnbase Nozzle_R1 plyr Rcpp reshape2 rTANDEM seqinr VennDiagram XML]; }; - puma = derive2 { name="puma"; version="3.12.0"; sha256="0in135rhfy5dx8q205rrcid63g5q6xh6w7rimz6a1brn89dviaba"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.18.0"; sha256="1m4iqss2v7llyb2c6dsgajavxj9wf5d51k6l07qhqd25znrvml2l"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.10.0"; sha256="1lvd5l2lcw84hcmzzwgbii87s9xd6cvqxzbc78393jhmgi8aapk0"; depends=[Biobase lme4 Matrix vsn]; }; - pwOmics = derive2 { name="pwOmics"; version="1.2.0"; sha256="0vlr71mhch716xl2i0366pxjkawci0g2imvfhsqinv5gd92m6hpq"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots igraph rBiopaxParser STRINGdb]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.8.0"; sha256="0y5bi4162b93d02ksg1hpqlfx4inl6bmal84lhrrzra5k6zzv72m"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; - qpcrNorm = derive2 { name="qpcrNorm"; version="1.28.0"; sha256="0ywh6iq1bywcyw5v6iax1ngigii3s7d0f6gfj2xk9qwfxpavzjjf"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.4.2"; sha256="0np8d7rw182zncyxcvn0sq0linl7aqy1aw2yysb5w29g8cgd8m82"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; - qrqc = derive2 { name="qrqc"; version="1.24.0"; sha256="0850frx6fg9py2laav0yqavl9ckbn6y475xm9r6gxvyzp63smzdg"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; - quantro = derive2 { name="quantro"; version="1.4.0"; sha256="1vkm12h5b85h0db2sxv3c8hhxmgpdycllxr6d9zv2y4an1zhjkn5"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; - quantsmooth = derive2 { name="quantsmooth"; version="1.36.0"; sha256="0gfqvx6djy0sl0dz1la19wzc6nfbazrw28wrpf1b934gfbjii25d"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.2.2"; sha256="1pc9n8nfxgdc5xw3jhpvv05yijwwk2f9i7ssjxwgnc8mczrzv8b9"; depends=[Biobase limma lsmeans nlme]; }; - qvalue = derive2 { name="qvalue"; version="2.2.2"; sha256="0zfip08aacy80cc6xx04789k46nghzdxj8dbsgixvvhwhg2vxy1n"; depends=[ggplot2 reshape2]; }; - r3Cseq = derive2 { name="r3Cseq"; version="1.16.0"; sha256="0zjxqmj1lblxcl73cisacjacdmw9aj4wvr5lxdn9b4kq6rcr7ljn"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.8.0"; sha256="1akmgiqgi53d1264mmhkizn0g1fvjvqdgzsrw9yx26xi9ysmq9kg"; depends=[data_table XML]; }; - rCGH = derive2 { name="rCGH"; version="1.0.2"; sha256="07mbhgyjjmlyv0237gccd04hjxf22qw7nx5g71ijxj4mb22igign"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - rGADEM = derive2 { name="rGADEM"; version="2.18.0"; sha256="1aib9qqvbq9myyngxlmv494i7pr96k4p9rmrnc4drxa9zhh0pp5a"; depends=[Biostrings BSgenome IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.2.0"; sha256="00gjlsgz3mac48qdpgxk0vvn5z454m2lcxm6lha8jby73pls9hh3"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; - rHVDM = derive2 { name="rHVDM"; version="1.36.0"; sha256="0k1gccnac59q54y2nypzgip2srs5yg3v2hhrz86ps50p2lx4pqd2"; depends=[affy Biobase minpack_lm R2HTML]; }; - rMAT = derive2 { name="rMAT"; version="3.20.0"; sha256="0dq4ipz1j6qai8q8z038hjb5j0w67gp7449vj8psgca2854gxa7s"; depends=[affxparser Biobase BiocGenerics IRanges]; }; - rRDP = derive2 { name="rRDP"; version="1.4.0"; sha256="101g3j8r8h0nc69k0srlwkxld4qd99ww8xf5b34sm015hvhfx55k"; depends=[Biostrings]; }; - rSFFreader = derive2 { name="rSFFreader"; version="0.18.0"; sha256="0z2lkjbs3svx1b9zr4smjwrcd9xzxhfp98428vzaqq0k79h1v666"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; }; - rTANDEM = derive2 { name="rTANDEM"; version="1.10.0"; sha256="1dmaqdjfmjkkrddf666hpp95s7s6x0ssinx9aybl6952ylfjgcd1"; depends=[data_table Rcpp XML]; }; - rTRM = derive2 { name="rTRM"; version="1.8.1"; sha256="0hy2wxlclbgw48gizm6l2c65x81s17qh4l7751h00yw0995l4dsq"; depends=[AnnotationDbi DBI igraph RSQLite]; }; - rTRMui = derive2 { name="rTRMui"; version="1.8.0"; sha256="1mbljb86k3vhiavcv4fvibj6fykg65p4nh7wrrm1nxz90k5hbznp"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rain = derive2 { name="rain"; version="1.4.0"; sha256="0nldnsy6x91nv3i24gj81yxmrr7d4j7iicqxy279gh1k5zh5l5r1"; depends=[gmp multtest]; }; - rama = derive2 { name="rama"; version="1.44.0"; sha256="0nka6a2dk7jn4lk0i2p91hxwdgpny6y3j4dz709crrxlz3xjqflm"; depends=[]; }; - randPack = derive2 { name="randPack"; version="1.16.0"; sha256="1i7rr4pid1yw5fjjlwcd0zy46z3c351vxqsj2z8mycl8cm29n8zn"; depends=[Biobase]; }; - rbsurv = derive2 { name="rbsurv"; version="2.28.0"; sha256="0pz7rza3j7yrdjp1q35y7xxhmkq9cvfg4ippgqqkny8qyayhy7bm"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="1.2.3"; sha256="1z91vk4bks47z2mypg8lg2qqxqwyggp7jykv7xl92msarqnz4izc"; depends=[Biobase fingerprint gplots rcdk rcellminerData shiny stringr]; }; - reb = derive2 { name="reb"; version="1.48.0"; sha256="1bxijf91vdr6088459r29kvy691bjbscy170pc0739iqbg7z80zm"; depends=[Biobase idiogram]; }; - regionReport = derive2 { name="regionReport"; version="1.4.1"; sha256="1sh6m6ly2r3lxvx6q6rb05ygd4c5ab7lzh4j6hpy5va3mg7prrgr"; depends=[bumphunter derfinder derfinderPlot devtools GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges knitcitations knitr knitrBootstrap mgcv RColorBrewer rmarkdown whisker]; }; - regioneR = derive2 { name="regioneR"; version="1.2.3"; sha256="0sf2j51ibmv38v19wg4anawwnini442hd30k7yvi3byqhs598jpn"; depends=[BSgenome GenomicRanges memoise rtracklayer]; }; - rfPred = derive2 { name="rfPred"; version="1.8.0"; sha256="09sc9y6pyw96piaqh33rzf94ryclknbhqig1fp36d3zabfj8a91i"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; - rgsepd = derive2 { name="rgsepd"; version="1.2.0"; sha256="0djx0fm44fj6k8dq4ysqag93icnymm2b38asgplds8y6fv9gp39b"; depends=[AnnotationDbi biomaRt DESeq2 GenomicRanges GO_db goseq gplots hash org_Hs_eg_db]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.14.0"; sha256="0cxg8w3244gcifvc27dm85wip776x5lnwkl7qhc7w92if57z7wcp"; depends=[zlibbioc]; }; - riboSeqR = derive2 { name="riboSeqR"; version="1.4.0"; sha256="1i9p9hxh2sipgpa1wf59pfs3h0qprr473axlvzw7f0yx171qimfg"; depends=[abind GenomicRanges]; }; - rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.28.0"; sha256="0mfcy7l31g5z5yv12sv9imaf19p9vawnk7cqcm50x2sm032r8n7f"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.0.2"; sha256="0m22q75fyzwyxn6s58sjyzqyzp5rb808fvvck8vljnqghcflbybc"; depends=[RColorBrewer]; }; - roar = derive2 { name="roar"; version="1.6.1"; sha256="13730bs9k37brga57yy24m2q323i1676qlk7fnlg8c6hm151bq2q"; depends=[GenomicAlignments GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="1.12.2"; sha256="0bfgd346kxbb4wkhnhfpgkv33fm7p63pldvjj28sxal88g14n22r"; depends=[Biobase XML]; }; - ropls = derive2 { name="ropls"; version="1.2.14"; sha256="1b6k2c9i263m83jhvhcv65daa1gjyrra5hvmm9fm26h829g16y4l"; depends=[]; }; - rpx = derive2 { name="rpx"; version="1.6.0"; sha256="04kd9kn7k8fswpy03ccbaq6glwxiilvklyygj9gmi2sam06q9d6i"; depends=[RCurl XML]; }; - rqubic = derive2 { name="rqubic"; version="1.16.0"; sha256="0gasrkxpbvhxig6n3k3n9hdid9cg4gnkffyi9xn2zl33zm8wyirf"; depends=[biclust Biobase BiocGenerics]; }; - rsbml = derive2 { name="rsbml"; version="2.28.0"; sha256="0fzn7vpfsfb3k0j6mid0prrgdaqsv8b3945d0ynls8jgp02ma6hs"; depends=[BiocGenerics graph]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.30.3"; sha256="0b1zkan1qv07bhbwrgsggg2zscqvrngi3j072pqfj1804b308xv4"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - sRAP = derive2 { name="sRAP"; version="1.10.0"; sha256="080s88l3a2fbgqnc8sy41kwzkm6skjazkirqini7n6xqcsqb9lih"; depends=[gplots pls qvalue ROCR WriteXLS]; }; - sSeq = derive2 { name="sSeq"; version="1.8.0"; sha256="1l05qm3576fx9v5bxvc0xm4916bzfvh1f4nnjdm67z82qxbx4wnz"; depends=[caTools RColorBrewer]; }; - safe = derive2 { name="safe"; version="3.10.0"; sha256="17ryzq2rc8hdmj1kzv62kzh1pn2nb454d73mdd5dk6qy0pgg4fan"; depends=[AnnotationDbi Biobase SparseM]; }; - sagenhaft = derive2 { name="sagenhaft"; version="1.40.0"; sha256="1y2fa861k9b9rb6hr0slvf5pgqwggssx7ppn1ddrh0yw53vk7dwy"; depends=[SparseM]; }; - sangerseqR = derive2 { name="sangerseqR"; version="1.6.0"; sha256="0jfh1jgvazi43bvj8m3546yh5vs0nhvnw7mmd68zndihm5agxhb1"; depends=[Biostrings shiny]; }; - sapFinder = derive2 { name="sapFinder"; version="1.8.0"; sha256="12a0wcjxcz77b06bymhqcj5wxzm478mlj9vcvbbqhdfvj7214hy9"; depends=[pheatmap Rcpp rTANDEM]; }; - saps = derive2 { name="saps"; version="2.2.0"; sha256="11v7nxlcnkslxl0giv3y2naxpfsmqmrj6b4y2g6zbp48zml45jgl"; depends=[piano reshape2 survcomp survival]; }; - savR = derive2 { name="savR"; version="1.8.0"; sha256="1vxxmzr8k6fn9fqr0pbfvccqq30d8w3fwjcr5x0bh1d77mzgf9n1"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; - sbgr = derive2 { name="sbgr"; version="1.0.0"; sha256="0bvvxd0c4k4mmwkcb9w02i2kb6vwlq84w8vfqiamnwjy2vgjgka9"; depends=[httr jsonlite objectProperties]; }; - scsR = derive2 { name="scsR"; version="1.6.0"; sha256="0g1vgx8wrdwbhlzmf0a11fg5jnbkvz402h8qj48vj4bq8j202bc1"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.4.0"; sha256="0dbw8kssi2l6mnvjh7skbxc0akyha2wpa0r6ixw73p4g5qbaqafn"; depends=[baySeq GenomicRanges IRanges S4Vectors ShortRead]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.2.0"; sha256="1xki7wsydgagsh3fx9gwdd2asrbm6q9gnh27bv2cyrmjpp0nkjg1"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCNA = derive2 { name="seqCNA"; version="1.16.0"; sha256="1wq92wszv0x99l52lm3k0zc2ffin1sp78xlyfabxpwi1v0yrkifl"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; - seqLogo = derive2 { name="seqLogo"; version="1.36.0"; sha256="0kn1a1nf2j4v9c09vjkz9bmxlln7yhg87bnyrdsxy1m55x56rn5k"; depends=[]; }; - seqPattern = derive2 { name="seqPattern"; version="1.2.0"; sha256="0p9zj6bic7sa0hb2bjm988kkk5n9r1kvlbqkzvy702f642n0j53i"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; - seqTools = derive2 { name="seqTools"; version="1.4.1"; sha256="19hxakskh3qa9ypp2nmly3mrlbjfrq2ya5f5gyhg4mv0vahm9yc8"; depends=[zlibbioc]; }; - seqbias = derive2 { name="seqbias"; version="1.18.0"; sha256="1wwskcbl3wd8gl63jl4wl0xwzj8kbwbc8xhp12z3xximngkk7dgd"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; - seqplots = derive2 { name="seqplots"; version="1.8.0"; sha256="1kk914pc462n37gmma6l1d0kcrw2qqgkd3sb67mrx053h1n0lz35"; depends=[Biostrings BSgenome Cairo class DBI digest DT fields GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 RSQLite rtracklayer S4Vectors shiny]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.4.0"; sha256="1db4g2sgfgr21hh3xcpv8lcnmrqgwfrj97dlpi8blqcs81mrhc3s"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.8.0"; sha256="0dkgwfynznpq2q55d83w4x0nmal3dkgzxi1jpdcsasqlhsyqvmvx"; depends=[mixtools rTANDEM shiny xtable]; }; - sigPathway = derive2 { name="sigPathway"; version="1.38.0"; sha256="126cyw88d6rxp3bzdqsmm2v0kvhn650qmi4zcs9v50n0hhwyrxrf"; depends=[]; }; - sigaR = derive2 { name="sigaR"; version="1.14.0"; sha256="07ip468liyg9b6q9izd1wdp29p9f2icfs01nf0il4gc76h6d0rr5"; depends=[Biobase CGHbase corpcor igraph marray MASS mvtnorm penalized quadprog snowfall]; }; - siggenes = derive2 { name="siggenes"; version="1.44.0"; sha256="18r1yqaq2ppa00vwgwdbla3sq4rcsr3d1jrjdbq0p17dan5f9dqz"; depends=[Biobase multtest]; }; - sigsquared = derive2 { name="sigsquared"; version="1.2.0"; sha256="1mgm84fdkzjp7hp3kp98l8g64mc3dg1cih2z9svmpcryp5fyxjvc"; depends=[Biobase survival]; }; - similaRpeak = derive2 { name="similaRpeak"; version="1.2.0"; sha256="024nr8imqp4vrrhfikn00kv9cx3sg1h862dmgvylbkmjmm4f2mr8"; depends=[GenomicAlignments R6 Rsamtools rtracklayer]; }; - simpleaffy = derive2 { name="simpleaffy"; version="2.46.0"; sha256="1x3f7hm7w44yarq4irv791330zfamhsqqwnqz8xfwrpvjrkv6avn"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.4.0"; sha256="1sypvrwq6ay7lzmb9cmpix1zgzafzryvf4my5jky846bcpam91qj"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.2.0"; sha256="1qmjy9cwhnyg4s3jfzi0z0yfdza4dma0q6h73772mhh2l4q149h7"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - sizepower = derive2 { name="sizepower"; version="1.40.0"; sha256="0wl1fvldarg85gg4i6xmh2ssma2hdqddd3lp7x13r2322344gmxl"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.2.0"; sha256="0kmlgv1j104dnlbvg00jsbcdhr60l83dabfrzggvx7s9aspwgp30"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; }; - snapCGH = derive2 { name="snapCGH"; version="1.40.0"; sha256="0fjqp0qhwk041pgwqp3av5ihkf4xb9li6zy6gmvk24hlj8sm600z"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; - snm = derive2 { name="snm"; version="1.18.0"; sha256="150lwwk6cyhwjypb4f3gsmhpiv4vcayip7gpl2vxfmvhg03yqbyl"; depends=[corpcor lme4]; }; - snpStats = derive2 { name="snpStats"; version="1.20.0"; sha256="16j3qq9vqswgra5xkm1ykwzcf8gxy7f7xa0l0z08n36hv7d0zd6x"; depends=[BiocGenerics Matrix survival zlibbioc]; }; - soGGi = derive2 { name="soGGi"; version="1.2.1"; sha256="11ksx2z9vkz1d39fhds7cadwr0mzicis5nizj6qyzmzlybyc8v72"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - spade = derive2 { name="spade"; version="1.18.2"; sha256="0m2784x2ysp4mc7m8n8scpr1h38m3p9glcc5jd6cix55bh3yzykk"; depends=[Biobase flowCore igraph Rclusterpp]; }; - specL = derive2 { name="specL"; version="1.4.0"; sha256="0i7j5bzvlsyy72xg2gcxggrz25ln3287gcd433mwyiira4apz1il"; depends=[DBI protViz Rcpp RSQLite seqinr]; }; - spikeLI = derive2 { name="spikeLI"; version="2.30.0"; sha256="0xqqwxhb89ngfr9jz3z3wsmq8l6lky4hcjnqvf9qd1cwjkf51am9"; depends=[]; }; - spkTools = derive2 { name="spkTools"; version="1.26.0"; sha256="0aznmn9si99x32kn2x5swhpahp96bsg71i1wizml0ni6lvmbxn0j"; depends=[Biobase gtools RColorBrewer]; }; - spliceR = derive2 { name="spliceR"; version="1.12.0"; sha256="0r5j0ibl2ccsxb7rr2fxw4b07wbdiyfndxkl4pgd9h0ks4qyhyjy"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; }; - spliceSites = derive2 { name="spliceSites"; version="1.8.3"; sha256="1jifh0nbqjhrc07jfc50hfk4wn1hv3a863rbr3fnqlg9rwg044w7"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; - splicegear = derive2 { name="splicegear"; version="1.42.0"; sha256="1g2fqql1wqzwz1vx5cq03ckld0gccqk6rv9l99xsaa8mhf0rn1qa"; depends=[annotate Biobase XML]; }; - splots = derive2 { name="splots"; version="1.36.0"; sha256="1cj8bygsv1g91cypdz2zbf2slirls7sqdxrvg6qka0n8las58sxd"; depends=[RColorBrewer]; }; - spotSegmentation = derive2 { name="spotSegmentation"; version="1.44.0"; sha256="074nzh18pj6dpk9bqh8id0j2vpaxvhi2ddrz6hnza381wzdgxdr3"; depends=[mclust]; }; - sscore = derive2 { name="sscore"; version="1.42.0"; sha256="0h86crb241vmaczp76wz4zv9ni1snmlkrdi1md3hgq1hqxnn9gzs"; depends=[affy affyio]; }; - ssize = derive2 { name="ssize"; version="1.44.0"; sha256="1aaafnj114j2zwf88y2133md6b33dsl88rg1zq0ql2xs4cxvsgkz"; depends=[gdata xtable]; }; - ssviz = derive2 { name="ssviz"; version="1.4.0"; sha256="0j4c5b2ivz6l6a3by9hgy59r9z4s854pgias6sabp4qzpqgc3655"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; - staRank = derive2 { name="staRank"; version="1.12.0"; sha256="1vgc3mhxyhrgwkapnqx4061l9l0nyc012508hma14xbxml3f76sg"; depends=[cellHTS2]; }; - stepNorm = derive2 { name="stepNorm"; version="1.42.0"; sha256="0kvpfiq6w1vksw6dqjx0kw46rrfafpfs9ii8bwp1kk3q84zmyrmm"; depends=[marray MASS]; }; - stepwiseCM = derive2 { name="stepwiseCM"; version="1.16.0"; sha256="1ss79yr75kw7fsd8ihpivj9k5v32zxr3ymkl6prba0nyxdj5wyz9"; depends=[Biobase e1071 glmpath MAclinical pamr penalized randomForest snowfall tspair]; }; - subSeq = derive2 { name="subSeq"; version="1.0.1"; sha256="1k7d3hdiqxdv3mn61gr9rxsqywh2xgj2l8r4806j8b05vyi1ybdk"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.8.0"; sha256="1g2zcarzi805y2933pyjdgg7l9imbhdf4pjhyr8bir0149li98cy"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.20.0"; sha256="174kh5cnbw1dg109wrzbf4xhslzn56fag4d3nxwswxinrdz360i9"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - sva = derive2 { name="sva"; version="3.18.0"; sha256="0jx4ar4nj8fgmrbhlaz6zm04zmcaacrakyzyy5hi2dgsy025c86c"; depends=[genefilter mgcv]; }; - switchBox = derive2 { name="switchBox"; version="1.4.0"; sha256="0lmrg3ahjmz7x3ngjmhkb2w6n2zv0lw40xq1f9lhiyzqzj23rri0"; depends=[]; }; - synapter = derive2 { name="synapter"; version="1.12.0"; sha256="0mrqbfg4kwwzm7g2sp1py715w52268kzlkhylqmr1cjqi20b0gb7"; depends=[Biobase BiocParallel Biostrings cleaver hwriter knitr lattice MSnbase multtest qvalue RColorBrewer]; }; - synlet = derive2 { name="synlet"; version="1.0.0"; sha256="05vxkzafgri9ppscv5ark65s15fn3g4lfnkv25ryfddflcfkl1n2"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.4.8"; sha256="09f41q8bnznmrfqwfjfd6h6p6xx20qg1l06dxjajbc0did1fblfz"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.8.0"; sha256="0kblzs5x5bh2bqg5bd5c33b405r33aicba0x0ky02vvqsld64f6l"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; }; - ternarynet = derive2 { name="ternarynet"; version="1.14.0"; sha256="0c25xinnlvafwf1x08zmcm1agwflvs9jpckhq58dc5fs8jb4zi6y"; depends=[igraph]; }; - tigre = derive2 { name="tigre"; version="1.24.2"; sha256="0fk73fmqf7d2pb6m5l78rslxh211zzsl9g3snn4507rfxvivcz11"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; - tilingArray = derive2 { name="tilingArray"; version="1.48.0"; sha256="0ac78mqmjr8wv7zw6rk6q7bxwfmvycsmgybqg4xayja01qvmwkji"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; - timecourse = derive2 { name="timecourse"; version="1.42.0"; sha256="01awyngw9qalsvagn1f51kdhkqfvscnfhlp50xndr3s2zmmra5xg"; depends=[Biobase limma marray MASS]; }; - tkWidgets = derive2 { name="tkWidgets"; version="1.48.0"; sha256="1a4j66pyhyns4mi5dfjqym4kd7dardhvhpr6r4ip34dc1b98hcg1"; depends=[DynDoc widgetTools]; }; - topGO = derive2 { name="topGO"; version="2.22.0"; sha256="029j9nb39b8l9xlzsp83pmjr8ap247aia387yzaa1yyw8klapdaf"; depends=[AnnotationDbi Biobase BiocGenerics GO_db graph lattice SparseM]; }; - trackViewer = derive2 { name="trackViewer"; version="1.6.1"; sha256="12n4rnph5viy0n45v6fl4b473dq71gqqz34hapnav13csy5nxc4i"; depends=[GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges pbapply Rsamtools rtracklayer scales]; }; - tracktables = derive2 { name="tracktables"; version="1.4.2"; sha256="1zb51wll7p9kw1q0wnir3gggqxr9p5mc30kk59vjl14apfpbx1vp"; depends=[GenomicRanges IRanges ore RColorBrewer Rsamtools stringr XML XVector]; }; - traseR = derive2 { name="traseR"; version="1.0.0"; sha256="03lqmnb2fann1fn42kr2k126ppgkb5rw7n25h908hmq200mfl122"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - triform = derive2 { name="triform"; version="1.12.0"; sha256="0pqfz6msalr2264iwi2hzam2sv8yl4fy1ri72pff5gh14rbxgiml"; depends=[BiocGenerics IRanges yaml]; }; - trigger = derive2 { name="trigger"; version="1.16.0"; sha256="1lswb0zdxkc37xkpyp65md4bv81njl74y6cl3dp9ym5mf47l5azg"; depends=[corpcor qtl qvalue sva]; }; - trio = derive2 { name="trio"; version="3.8.0"; sha256="066401wayzl09p9g10j8vl9nhk57351ll1rf28c8ix4kh50pszi5"; depends=[]; }; - triplex = derive2 { name="triplex"; version="1.10.0"; sha256="1k9dr5bdrbqgxjs1dwha7xxaas3cfhpfi75pykq7hhmxip6bcsp5"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; - tspair = derive2 { name="tspair"; version="1.28.0"; sha256="0m083g5z77n7dd4lnbhvbwjkykh7a4pl4v8j7ipr5w7f9dhdjk33"; depends=[Biobase]; }; - tweeDEseq = derive2 { name="tweeDEseq"; version="1.16.0"; sha256="0dyhczzfbp99nd2ia78scyzw8d02hrwaqr1pqj1c038mm6vsldvb"; depends=[cqn edgeR limma MASS]; }; - twilight = derive2 { name="twilight"; version="1.46.0"; sha256="1v3aghnmx1g8kn1z98fx8k71gh2g9q1x52x3lhx70wkzcn6phphd"; depends=[Biobase]; }; - unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.6.0"; sha256="0iiwaihywibrfkiayp9dciv9i5n1j13ildwhaxilrha2qdmmjxqm"; depends=[BiocGenerics HTqPCR]; }; - variancePartition = derive2 { name="variancePartition"; version="1.0.7"; sha256="10hdxhl4bm1ky5cjiafgbc63aalh75d6ii16gllw0kd4agp2xxfx"; depends=[Biobase dendextend doParallel foreach ggplot2 iterators limma lme4 reshape2]; }; - vbmp = derive2 { name="vbmp"; version="1.38.0"; sha256="075hp0bb66fjda8bzhgcmxjhlrncwfwqrzsm885ci928yrl4fyjw"; depends=[]; }; - viper = derive2 { name="viper"; version="1.6.1"; sha256="1jmddpbfwnhc9spblr38qljhrzzkc8r2l26h58b996wjrh0x75gh"; depends=[Biobase e1071 KernSmooth mixtools]; }; - vsn = derive2 { name="vsn"; version="3.38.0"; sha256="17l1wywbm99g4n08m6wasx59wfavjas0f03a87a1pdv8ff4i71ac"; depends=[affy Biobase ggplot2 hexbin lattice limma]; }; - vtpnet = derive2 { name="vtpnet"; version="0.10.0"; sha256="1qvg9f8qa64rpdqv575b7zadf4j1hs5ijhpjk4qjb8h7z5xprr7s"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.10.0"; sha256="1hcfxiiwk0f7i59aj7v55403m755cwfldwniif8x9kkr1xm2n8jh"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.4.1"; sha256="0j0cy5bi8pacc6bhy0prlv446m2kgxyjnd5r3vw2lxc1ygllxn6h"; depends=[Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer seqinr stringr wmtsa]; }; - waveTiling = derive2 { name="waveTiling"; version="1.12.0"; sha256="0j866mgxj44mv4wp0yqnav83w8pfb47lmjhp1y0qqvxc6q9k80g8"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; - weaver = derive2 { name="weaver"; version="1.36.0"; sha256="0ixs723mh9p1pq6za8xjqknbq1jq4ylcxsv08f40izmlp40mxjdx"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.42.0"; sha256="1xli6q0d9y2wikqxk3cf2am3plfk5c27w95q607brs6kl3ghlafl"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; - widgetTools = derive2 { name="widgetTools"; version="1.48.0"; sha256="0gwx02bqpfppmk34vh5qfax9bid7854dbapgdnzz32xzhamk64a8"; depends=[]; }; - xcms = derive2 { name="xcms"; version="1.46.0"; sha256="0hhw86xkd3z7liyivj1ssdd7z8q1m91jplni8ags1sify46fh57p"; depends=[Biobase BiocGenerics lattice mzR ProtGenerics RColorBrewer]; }; - xmapbridge = derive2 { name="xmapbridge"; version="1.28.0"; sha256="0b7l9gr1qrjj8fg9mcb3xyaw3s3zk8k2d46l9bgsl6g0xz79j615"; depends=[]; }; - xps = derive2 { name="xps"; version="1.30.0"; sha256="0wh98fsj3j368bxk4wa7rjd3acwl04r1dfiy13a89zv1fzv3wvky"; depends=[]; }; - yaqcaffy = derive2 { name="yaqcaffy"; version="1.30.0"; sha256="1pj2ksqbj7dlc76s6qagi7iq35wa83gx5cp0hm42w3bj7mxprjbi"; depends=[simpleaffy]; }; - zlibbioc = derive2 { name="zlibbioc"; version="1.16.0"; sha256="01wc26ndg4jsn1wyrl6zzq636gxaip5fci0xapym4lh9wryc4wnw"; depends=[]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.10.2"; sha256="1rvqh3krhcmqk82ykhcpqm93xci5bsh0xg8dw45jb80ldfz00nrh"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.10.3"; sha256="0gn19dd8m8jc8cjkwy12m7g7mzbxpfg2lhw0pklhbb00nq1hykqa"; depends=[BiocGenerics shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.20.0"; sha256="1sjrpcccnnk2jfiwxm1ly0mzj8h6z3dvv9r3sa2ph5k4v13rn3gn"; depends=[haplo_stats]; }; + iontree = derive2 { name="iontree"; version="1.18.0"; sha256="07j97v062sm1dv3bz7n5s7z5vimizkmv5g8ck4irvdjwm7my572a"; depends=[rJava RSQLite XML]; }; + isobar = derive2 { name="isobar"; version="1.18.0"; sha256="1zckdyaclbnmyhmzavlr350q1pqqwrl9s0cdplfr1bj6hjififc0"; depends=[Biobase distr plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.0.3"; sha256="1kclz9kl3pvg2djm6kkxwg8nds33pryf7l27ilx51hcarci78gkq"; depends=[BiocGenerics DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots IRanges plyr RColorBrewer S4Vectors SummarizedExperiment]; }; + iterativeBMA = derive2 { name="iterativeBMA"; version="1.30.0"; sha256="0x6sd1zdw5lr5r5fw3xig1466cch3snradcms8dl9y1dwnv7vr2v"; depends=[Biobase BMA leaps]; }; + iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.30.0"; sha256="0vbvkqlj2facp4wfww650wm9m3czh33rj99d7mmi9h2qsvmbza21"; depends=[BMA leaps survival]; }; + jmosaics = derive2 { name="jmosaics"; version="1.11.0"; sha256="1wg8mqh72dqwzqyx0wr1y0wqqmy10qv7fx0ybb78fh76jdwrq4lw"; depends=[mosaics]; }; + joda = derive2 { name="joda"; version="1.20.0"; sha256="06lli20fxdvf9836xmg1dkf7f62khnd4lpz9c3xna9wqawcdk3wa"; depends=[bgmm RBGL]; }; + kebabs = derive2 { name="kebabs"; version="1.6.2"; sha256="1bc5qg23h0f648l2xpizvyagd6jwwhwj1hw5s70jkb42qfvgpyr5"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + keggorthology = derive2 { name="keggorthology"; version="2.24.0"; sha256="0340gpvjpnk00iyn06bp0ad1cibp6b0kq4gk143mvkcvyk8vhk01"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; + kimod = derive2 { name="kimod"; version="1.0.0"; sha256="05g1kvdfnhb77iwnad85214lf2q6lmrsz29lgc95kwyn62r60fj8"; depends=[Biobase cluster]; }; + lapmix = derive2 { name="lapmix"; version="1.38.0"; sha256="1k4057cykcm1nzzp09yb31pl2w9ii047cc4iknndklp3827riyc0"; depends=[Biobase]; }; + ldblock = derive2 { name="ldblock"; version="1.2.2"; sha256="1rr01m9dgzg3lxnql0fvak89rnjwnlqxclq70wks1j6wr5ggyxqi"; depends=[Matrix snpStats]; }; + les = derive2 { name="les"; version="1.22.0"; sha256="17cxxbf5z2v5ada43lj6blb6c0wcfp8izvgyi58dv1rf8nmp77w7"; depends=[boot fdrtool gplots RColorBrewer]; }; + lfa = derive2 { name="lfa"; version="1.2.2"; sha256="1xqjj7q70qxx952yf28s2ry03mj4csbri21gi7rl5ixi0581ji3a"; depends=[corpcor]; }; + limma = derive2 { name="limma"; version="3.28.21"; sha256="1dvisifd2rr7s1rrsqj5vrv2qcg4la4yi2ajbn0zkk5z81ffxv9f"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.48.0"; sha256="0rr6202jp7qx2csbvqr6qcg8584v9msmiqgcm6r1wmrwggh7nksb"; depends=[AnnotationDbi BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; + lmdme = derive2 { name="lmdme"; version="1.14.0"; sha256="1ng0ng1pxdrxpmmaqzg8dxl4wics06z9g28zfgpdzq1hacckspd4"; depends=[limma pls stemHypoxia]; }; + logicFS = derive2 { name="logicFS"; version="1.42.0"; sha256="0311x3miljdg9d1fw0x24il4c2i0d799z3si44vw7r6xxws11fzb"; depends=[LogicReg mcbiopi]; }; + logitT = derive2 { name="logitT"; version="1.30.0"; sha256="16fqyk0kkidz7as21zslii97mhzclmf7pd5bimvajv9hbx7m1284"; depends=[affy]; }; + lol = derive2 { name="lol"; version="1.20.0"; sha256="1vp25q5a1q9fzagy85lb0ab3iiapj4ilas5wkjxavh6bx6198z4w"; depends=[Matrix penalized]; }; + lpNet = derive2 { name="lpNet"; version="2.4.0"; sha256="02bq0fw0hq50y591ys85lk50hy2ad72izrvf7wds1x4c3sgcbhnm"; depends=[lpSolve nem]; }; + lpsymphony = derive2 { name="lpsymphony"; version="1.0.2"; sha256="1ckijz59g5sx8phwg28xv17iwlja6mdnffnzrwqg1f17kc423vzm"; depends=[]; }; + lumi = derive2 { name="lumi"; version="2.24.0"; sha256="1p8w6lfwlzcizc6517hb85ih8p9wzqklk2s7qsacsprfwh1h7wvq"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; + mAPKL = derive2 { name="mAPKL"; version="1.4.2"; sha256="089hsy6x144qrwqd555py8zlb7zka4yjf1qww0lx7kv131295wkf"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; + mBPCR = derive2 { name="mBPCR"; version="1.26.0"; sha256="1c57c3dfaxdzalqnsfg9ac5kppn8hdajnxmy58rzma0509k9kjkd"; depends=[Biobase oligoClasses SNPchip]; }; + mQTL_NMR = derive2 { name="mQTL.NMR"; version="1.6.0"; sha256="1p2wk16db2g2ns6vvk7ms5s10n3xk37nbbpdgjrim9b1jxiv7mf3"; depends=[GenABEL MASS outliers qtl]; }; + maCorrPlot = derive2 { name="maCorrPlot"; version="1.42.0"; sha256="14i8q92jhp22r6mkb2813507q270z6jhpq1qvagaardvhvaqjqzj"; depends=[lattice]; }; + maPredictDSC = derive2 { name="maPredictDSC"; version="1.10.0"; sha256="0w3csffy6285d3y9lj8b7i59x5x4zkgwf2pl07y5vx7rdpjg9rfr"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; + maSigPro = derive2 { name="maSigPro"; version="1.44.0"; sha256="05piq7h2zg8pgxd29xgk346ikbbam02fsg8i4k9q55i5bnx7ifmb"; depends=[Biobase limma MASS Mfuzz]; }; + maanova = derive2 { name="maanova"; version="1.42.0"; sha256="0kypia11sal5gmiykapzaly18qsrbv4qi22ilz5c1plrk65rz0li"; depends=[Biobase]; }; + macat = derive2 { name="macat"; version="1.46.0"; sha256="137g4wmdyzfyj45gjxla0caf0pp0gbns30v521j7awlxq8rsd6qh"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.46.0"; sha256="1wj7pfajhwhl6gbja4hr8jlzciighgzhhvy8553pkj4mnrv204r3"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; + maigesPack = derive2 { name="maigesPack"; version="1.36.0"; sha256="061bp7mqi1n0c1vcbnbmmpxbj2lvjvbcny4vh55klqw1r7wqjbm6"; depends=[convert graph limma marray]; }; + makecdfenv = derive2 { name="makecdfenv"; version="1.48.0"; sha256="0s065hgmrinrixxc813114cqi91n0s10ngkbm8r20q5jm3xfsiqd"; depends=[affy affyio Biobase zlibbioc]; }; + manta = derive2 { name="manta"; version="1.18.0"; sha256="0kqic6985zxz9hwcmyhc0px6ggdmshbsz4x3xyw9mc1q2d6svjdp"; depends=[caroline edgeR Hmisc]; }; + marray = derive2 { name="marray"; version="1.50.0"; sha256="1rzbk40zzkr7xll5dzfy92jjmf0qkkw9l806kaz1mwfal8qka87m"; depends=[limma]; }; + maskBAD = derive2 { name="maskBAD"; version="1.16.0"; sha256="0s1l2s2niqsvjk2083i8141mrvf8ardxg5mg7w742r5ga0m469sq"; depends=[affy gcrma]; }; + massiR = derive2 { name="massiR"; version="1.8.0"; sha256="01yhz3cf9wgxszrcvxkyqj8ab8a5p52kqj1zg499147kaf8hciqn"; depends=[Biobase cluster diptest gplots]; }; + matchBox = derive2 { name="matchBox"; version="1.14.0"; sha256="1fnxyig4wmhaymbn4adh7pxxk9qqck796n34w4lrrx0ggxwlz2g1"; depends=[]; }; + mcaGUI = derive2 { name="mcaGUI"; version="1.20.0"; sha256="0akv7l6sy6nvj658q8pjp7dhkkfsx7x9iww9mv0jwyfdn811saa2"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; + mdgsa = derive2 { name="mdgsa"; version="1.4.2"; sha256="047syngjdzjpad3iqy0s1a6f5pyl3rmsmadasjzc4f3l7xyq6jmn"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; + mdqc = derive2 { name="mdqc"; version="1.34.0"; sha256="0xm6v7irlkhbi1ny93fglhixajbp41lkv7yjzr8ysszvdakwrmmr"; depends=[cluster MASS]; }; + meshr = derive2 { name="meshr"; version="1.8.0"; sha256="171is2w5d7i26mmdncz2wx3y48dnqhbzgskwsn3l3c1acmnrpbr6"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; }; + messina = derive2 { name="messina"; version="1.8.2"; sha256="01p0zbmay73v2ba41fs0hmnn47q7flggc0y0jhgf22cpjmsqm0qj"; depends=[foreach ggplot2 plyr Rcpp survival]; }; + metaArray = derive2 { name="metaArray"; version="1.50.0"; sha256="1kfhiplzxvz0j99h2kigqfwpgpqzp17yl3dq2qw51s99257gwjvd"; depends=[Biobase MergeMaid]; }; + metaCCA = derive2 { name="metaCCA"; version="1.0.2"; sha256="0g345pxmlhkxdx8fm725y52vx8zd24wi5rxhqh5xs087dqyzmy6k"; depends=[]; }; + metaMS = derive2 { name="metaMS"; version="1.8.0"; sha256="1skvlqz8q9k3pqibbjyr9ajx9x1p11649lmh8f0sgi6y4xframq7"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; + metaSeq = derive2 { name="metaSeq"; version="1.12.0"; sha256="1x398spd55qwj4pj5bfsmh0skj4gqy7h4dv16c65lk7r9qmkg99s"; depends=[NOISeq Rcpp snow]; }; + metaX = derive2 { name="metaX"; version="1.4.2"; sha256="0d70jnljn2r26vrsyndf8pac0k731q38l8g84sb932ff7w48sqkf"; depends=[ape BBmisc boot bootstrap CAMERA caret data_table DiffCorr DiscriMiner doParallel dplyr faahKO ggplot2 igraph impute lattice missForest mixOmics Nozzle_R1 pcaMethods pheatmap pls plyr preprocessCore pROC RColorBrewer RCurl reshape2 scales scatterplot3d SSPA stringr tidyr VennDiagram vsn xcms]; }; + metabomxtr = derive2 { name="metabomxtr"; version="1.6.0"; sha256="0shgzl0k2b3ig6gycgl4xf09qwk288p61dqd2gi231p4q825sc5v"; depends=[Biobase Formula multtest optimx plyr]; }; + metagene = derive2 { name="metagene"; version="2.4.4"; sha256="0p8d6fq1zn0k8r7fb6iz80azk866abw1kqahx1lx35vgaxxm9smx"; depends=[BiocParallel DBChIP GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges matrixStats muStat R6 Rsamtools rtracklayer]; }; + metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="1.1.0"; sha256="1z7wj7zglm05ny0caqkj8h22sxgawrh295i4jlis6y39lhwbv6bj"; depends=[Biobase Biostrings dplyr lattice lazyeval magrittr RSQLite ShortRead stringr]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.14.2"; sha256="08iwmv4ggsw98h6pf26dzbpb5qg77pcmjapxr77z4mhcram6yaxi"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; + metahdep = derive2 { name="metahdep"; version="1.30.0"; sha256="0yifwp5cya5j8c1kl9a8nfqgn2l8imfjb1gzcxf32c53jwppwbf9"; depends=[]; }; + metaseqR = derive2 { name="metaseqR"; version="1.12.2"; sha256="0ycfqjxd9vyx4dky42yxg3754lx37s1yc3r1nr774r0kbzaykbc3"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; + methVisual = derive2 { name="methVisual"; version="1.24.0"; sha256="1g4ijymr6bv384vcsdpkamn5mk0gkd5mf7yiyjmbsgzwxx6mrpii"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; + methyAnalysis = derive2 { name="methyAnalysis"; version="1.14.0"; sha256="1nva4c9f30x5ym3cd2f3r4dxksihdaqzzskkanb7f6n89xdl512h"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; + methylMnM = derive2 { name="methylMnM"; version="1.10.0"; sha256="1944palwb2hfvsi8j4384fhjmqfk41fihq2w9y3cff0993j5i8cp"; depends=[edgeR statmod]; }; + methylPipe = derive2 { name="methylPipe"; version="1.6.2"; sha256="1mci0y9dy1lb5vv7makh4mbm4h5ybdi0ay6qqf343y56zpjdlwmm"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; + methylumi = derive2 { name="methylumi"; version="2.18.2"; sha256="1jxmk1r44x847sny1jrkka20a1z27yh7fv9pwgaabl5z8vxhpbyy"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; + mgsa = derive2 { name="mgsa"; version="1.20.0"; sha256="0zy1mmil5s2jiwknixavxhn05b58qyr87gc1yd7i86z7d0f66zjh"; depends=[gplots]; }; + miRLAB = derive2 { name="miRLAB"; version="1.2.2"; sha256="1wd591kd12dlj8dzxyv7dadi5clr0l6ar9n6lscc2yr16jwlwcv6"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; }; + miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.0.2"; sha256="1nc4qgk5sr1l007q5rqm2492azbbmffd7y17r0kfscr2pv67cs4x"; depends=[AnnotationDbi DBI miRBaseVersions_db]; }; + miRNApath = derive2 { name="miRNApath"; version="1.32.0"; sha256="1cijz8wbaq0wg6f0qf37b65fska619fw8vxy57anm258nasi1z8m"; depends=[]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.6.0"; sha256="0dbqh8jwzqhdjs8gd8095qzhbwn5c8ahqn7qq0dhl1yhhv3hpbw5"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRcomp = derive2 { name="miRcomp"; version="1.2.2"; sha256="19x8ldv1bdnbmjwjaicqmaf7iy391n42h5y1lckjlbcsxbss84bi"; depends=[Biobase KernSmooth miRcompData]; }; + microRNA = derive2 { name="microRNA"; version="1.30.0"; sha256="1y997xxnf6b3magg2jkg26pa6sibz9c30bcc2131minvw2a1x7i4"; depends=[Biostrings]; }; + minet = derive2 { name="minet"; version="3.30.0"; sha256="06ya26k7k8a3pphqfr93xcplrl2di895mnqmvywqg17lgn2df557"; depends=[infotheo]; }; + minfi = derive2 { name="minfi"; version="1.18.6"; sha256="1mbrjmmjib5fw8jvk9fw6gfwfcqwi87qgwjphsvdfwhczlzkii7j"; depends=[beanplot Biobase BiocGenerics Biostrings bumphunter data_table genefilter GenomeInfoDb GenomicRanges GEOquery illuminaio IRanges lattice limma MASS matrixStats mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + mirIntegrator = derive2 { name="mirIntegrator"; version="1.2.0"; sha256="0axnmf01xdbf50jzi16awx4anj44diyshzhwjy9akcq0fw3x9bs9"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; + missMethyl = derive2 { name="missMethyl"; version="1.6.2"; sha256="02i343siji4z48zg8p9daxl57smgc3myx2f0s67mmzp59gbabz7q"; depends=[AnnotationDbi BiasedUrn IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; + mitoODE = derive2 { name="mitoODE"; version="1.10.0"; sha256="1vgywn96b1p6yndhxcx2297p93skdpw8r7yzfz6ph828camw7g73"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; + mmnet = derive2 { name="mmnet"; version="1.10.2"; sha256="18ypmvx4pjqv40k2jclq92gl2cw9qpkakifv2jnaa27qnp1x9ivc"; depends=[Biobase flexmix ggplot2 igraph KEGGREST Matrix plyr RCurl reshape2 RJSONIO stringr XML]; }; + mogsa = derive2 { name="mogsa"; version="1.6.4"; sha256="14mfnsylckgv01k8g2hj5vxbfiih0d0jk77rb0r8p21lcd25ls7a"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; + monocle = derive2 { name="monocle"; version="1.6.2"; sha256="1j65kdzrlzyfzv1in0lswqksv3rs336jddnpxyw8k27iz343dvvf"; depends=[Biobase BiocGenerics cluster combinat fastICA ggplot2 HSMMSingleCell igraph irlba limma matrixStats plyr reshape2 VGAM]; }; + mosaics = derive2 { name="mosaics"; version="2.10.0"; sha256="0kazrdn03a5969d7gy86wfvskpw3bmfib7pbd1p59pic5nnhqznp"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; + motifRG = derive2 { name="motifRG"; version="1.16.0"; sha256="1ds22paqc0923y6z1fy0arw0wxvvmglfvfgarhywv1qywhq68mbq"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; + motifStack = derive2 { name="motifStack"; version="1.16.2"; sha256="1a37h7ryj9hj43mb1ynrsi5ypfaw2cr1cfmccw44bwf1fn5grzl3"; depends=[ade4 Biostrings grImport MotIV scales XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="1.2.2"; sha256="0zfvig6rf4ix5hh6mk5lada9sh7cr6nbngqr6gqgm5hy5bvkn51m"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; + msa = derive2 { name="msa"; version="1.4.5"; sha256="0g3p5kfyszll09dwdfjwkkdyhnfj1ymk4bfk1j01vlzqhcd3d2hl"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msmsEDA = derive2 { name="msmsEDA"; version="1.10.0"; sha256="0spbbj1vxyyhmhbg79sby9i7hw8lxzn95qp1qpcds6pzbi98555p"; depends=[gplots MASS MSnbase RColorBrewer]; }; + msmsTests = derive2 { name="msmsTests"; version="1.10.0"; sha256="04gdsxdpmrpj8nzm5jn96dzvyxrcjj29nks4n0rx53lqada3zx8y"; depends=[edgeR msmsEDA MSnbase qvalue]; }; + multiClust = derive2 { name="multiClust"; version="1.0.2"; sha256="1a4brwg01ni96p661aqvaivdrfg6x7iwv5sh1303bm7fzr8kyhhh"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiscan = derive2 { name="multiscan"; version="1.32.0"; sha256="0kxnnk55605km690ikfglbnc39kps4a26r2v9wcdfngza0jcf4xa"; depends=[Biobase]; }; + multtest = derive2 { name="multtest"; version="2.28.0"; sha256="11z0rzfzfk2fgl0l7hv9sb6g19d9ixkn634fnfb2pz141bbsrcwd"; depends=[Biobase BiocGenerics MASS survival]; }; + muscle = derive2 { name="muscle"; version="3.14.0"; sha256="0h9czpi4qvl94kgdil6c263k4r55a0baw2h11qn0i8vy6szgb4l0"; depends=[Biostrings]; }; + mvGST = derive2 { name="mvGST"; version="1.6.0"; sha256="16gdxqghch4422vnjf1phzfrdp63043bag2jmhm3yni0z92b47p1"; depends=[annotate AnnotationDbi GO_db GOstats gProfileR graph Rgraphviz stringr topGO]; }; + mygene = derive2 { name="mygene"; version="1.8.0"; sha256="17a5q7zbsm1qk7asz4ddf5vgyxvfsxkpxhn52p5gd6aikv5kjdqr"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.2.0"; sha256="06d7awkmx8fg4m8j09lscs1kvk9nx1nbd0xmb6divsjhb3mx1p0j"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mzID = derive2 { name="mzID"; version="1.10.2"; sha256="18fwrd3df0gbji1g48dd1zblmf7hz33h1jwfx0nana0j8y8x3xr1"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; + mzR = derive2 { name="mzR"; version="2.6.3"; sha256="1kfz5kwbjpz3pg0ccrkx0alq14bcp4z6az4k8h3766n9zcb69774"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; }; + ncdfFlow = derive2 { name="ncdfFlow"; version="2.18.0"; sha256="01614r9507vwz7irdccxb3swlx5jlxrmdcnxjgd7yxzfdwsc012x"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo zlibbioc]; }; + neaGUI = derive2 { name="neaGUI"; version="1.9.0"; sha256="12sca0i2h7k6lcr525cnc476bf1g6gqzvi6zm0zpdbciyl9cxbny"; depends=[hwriter]; }; + nem = derive2 { name="nem"; version="2.46.0"; sha256="0aa6lgivy69daaixx5zzymlfypn22gn1x0126ygrbv9g8vpzr470"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; + netbenchmark = derive2 { name="netbenchmark"; version="1.4.2"; sha256="0id1b0v6vkzdh030vq3ppfr808kq1blyb6s4jncr772izy4irnmb"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; }; + netbiov = derive2 { name="netbiov"; version="1.6.0"; sha256="12d28igggc8mw05bzxl67647akx1yrw671s67jfdc0zyg2xvfgi9"; depends=[igraph]; }; + nethet = derive2 { name="nethet"; version="1.4.2"; sha256="0ygz7zqksp5i1fk5gqpb4dlsqyi3z609379h654arzkr1s1kvdqj"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; + netresponse = derive2 { name="netresponse"; version="1.32.2"; sha256="1qx8xsxlgib73c2bgjxj01y8y47c8mi15708pdb589dm8aldkilq"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; + networkBMA = derive2 { name="networkBMA"; version="1.14.0"; sha256="1az74f0fa9z9x4d68mjxlzf1d5x1zjam494qs79r294qbf7h7jpr"; depends=[BMA Rcpp RcppArmadillo RcppEigen]; }; + nnNorm = derive2 { name="nnNorm"; version="2.36.0"; sha256="02s0rcwq5b0bar5h8x08xgz1gdvr69dlv4l3s84d4s1rb2bmjipa"; depends=[marray nnet]; }; + nondetects = derive2 { name="nondetects"; version="2.2.0"; sha256="06dkj8fd2l3a0x2zz84g3kfyqsw3pridn05admhag0nalzqiy6c3"; depends=[Biobase HTqPCR limma mvtnorm]; }; + normalize450K = derive2 { name="normalize450K"; version="1.0.0"; sha256="0rfzvg4lc8wppx5g5zhcgp8vh4qw9gynmmnwdgnf48fmdvkirpm9"; depends=[Biobase illuminaio quadprog]; }; + npGSEA = derive2 { name="npGSEA"; version="1.8.0"; sha256="130w9rw7njff90b070kkq395ariy9y409kxxmbq61fmdmnqvxnnk"; depends=[Biobase BiocGenerics GSEABase]; }; + nucleR = derive2 { name="nucleR"; version="2.4.0"; sha256="1s6k181g4q23x1pk9728vbsjia8dlcwn1gl2b9rvwagspidyvq1p"; depends=[Biobase BiocGenerics GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + nucleoSim = derive2 { name="nucleoSim"; version="1.0.2"; sha256="0vyjr0lbswfwdil48pafljz79s384qr7pk4jsfqnih07c8drj5pb"; depends=[IRanges S4Vectors]; }; + nudge = derive2 { name="nudge"; version="1.38.0"; sha256="01gvisf0894hz1jgmhf9d0b98rj92k1bfhy3pn1fpqp4qq9i3dp0"; depends=[]; }; + occugene = derive2 { name="occugene"; version="1.32.0"; sha256="06ywswmbmkajwa7wwj0bbmgwk50h0af9b5m1bvm26w6yqkpxyn0v"; depends=[]; }; + odseq = derive2 { name="odseq"; version="1.0.2"; sha256="1y2nvm05pf7pmrrb1kfvkspqwrlq5fsk28kbp6bh3df7f4rahwpx"; depends=[kebabs mclust msa]; }; + oligo = derive2 { name="oligo"; version="1.36.1"; sha256="1jwbj5b3n9vwgf81cr8cnxhiynmnh2yjzsd1520a67na739ddsxr"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.34.0"; sha256="1jz5s7srrdxxfppplajq7q4c1sqwbw6lwsb0xms2chw1qnshj3r5"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicade4 = derive2 { name="omicade4"; version="1.12.0"; sha256="031vnyv15aw1kmw0cdjsmb2q0g90hc1316dh8za64z0k0cmhdkb9"; depends=[ade4 made4]; }; + oneChannelGUI = derive2 { name="oneChannelGUI"; version="1.38.0"; sha256="0x7s8f6cvl6dlrjq5g7wq9542rpjqqgal1x0jh1za667n5cw1zgv"; depends=[affylmGUI Biobase Biostrings chimera IRanges Rsamtools siggenes tkrplot tkWidgets]; }; + ontoCAT = derive2 { name="ontoCAT"; version="1.24.0"; sha256="188j6wl5y9zvki4gzfv58i50vf56q36snk025pkj973nll82m4vl"; depends=[rJava]; }; + openCyto = derive2 { name="openCyto"; version="1.10.3"; sha256="1i0qq7v5s09cm6icp7347dlcbf9n81fai8xxv6ahk90jngmlsncs"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + oposSOM = derive2 { name="oposSOM"; version="1.10.0"; sha256="0ybyqxy4z0djppjj7gqw71pm4ll6b5rzwrc7zfsil9n1n33ajvdj"; depends=[ape Biobase biomaRt fastICA fdrtool igraph KernSmooth pixmap scatterplot3d som]; }; + oppar = derive2 { name="oppar"; version="1.0.2"; sha256="0nzjiy18amidc7x388lpq65i2yj0lvy0xgwzzgnlyqfjcdhlasi4"; depends=[Biobase GSEABase GSVA]; }; + pRoloc = derive2 { name="pRoloc"; version="1.12.4"; sha256="1qvg41wyn9snqr0fqygcpma4q80kr7gxsfh78yz4jmykqdvgwm53"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class e1071 FNN ggplot2 gtools kernlab knitr lattice MASS mclust MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="1.6.2"; sha256="1ka87amamlzbapb1ih0x5mlcq0lmz4prqsdf0j4il01kq5x9ml5i"; depends=[dplyr DT MSnbase pRoloc scales shiny]; }; + paircompviz = derive2 { name="paircompviz"; version="1.10.0"; sha256="0b1vfkg554pmm0nmfjlbriqvbvy4fzik8cwn7qqsvzqs1928ii0i"; depends=[Rgraphviz]; }; + pandaR = derive2 { name="pandaR"; version="1.4.2"; sha256="17gx2hfr1s79c69y8w3fmfrrvkzbr2m0917cq7wwdpxxi376b6yk"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; + panp = derive2 { name="panp"; version="1.42.0"; sha256="17hlbi20bxm2qidk8aa224vsqp9dfjjd79yhh0711h9aylwixn6m"; depends=[affy Biobase]; }; + parglms = derive2 { name="parglms"; version="1.4.2"; sha256="1k04zpwwk1aknlwg5xqsl1pszwbh2873606y2ycqsi7ngz1yhwnx"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; + parody = derive2 { name="parody"; version="1.30.0"; sha256="03hvv8jgk56h60gfm62ia4f67fhszs8dv5whx3frriwbf7w2jxaw"; depends=[]; }; + pathRender = derive2 { name="pathRender"; version="1.40.0"; sha256="1fa9d2sp1rxwmxkd1snqa5ay5q5znx8xbmn3jsga9giw9nh7iras"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; + pathVar = derive2 { name="pathVar"; version="1.2.0"; sha256="15jha74blfxdr5398gdwg59p4wmymjkmwvinrspw29dqkxn0wm64"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; + pathifier = derive2 { name="pathifier"; version="1.10.0"; sha256="0kj9jm0az186d89lr6p016zsnj3zjcbwcs094jqf322zz795c275"; depends=[princurve R_oo]; }; + pathview = derive2 { name="pathview"; version="1.12.0"; sha256="1vx6s2ad0yaqv2mnc6257qgmghffhyh7cwsir2pcvy7jd7xdkcl8"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.6.3"; sha256="1l6d4r6c3mjsaczw4cyiglfc8dw34k56bz0vd5ddaiy01kqn5g1w"; depends=[data_table httr igraph plyr R_utils rJava rjson XML]; }; + pbcmc = derive2 { name="pbcmc"; version="1.0.0"; sha256="0xchby283wni800wlslk7rfdm7nqnasli1d81al8rsn98lachyiq"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="1.0.2"; sha256="0nr84v2mwzw0bbz5y8llgkpkg10jalc0ciwnqgaskl1skxvhc4ja"; depends=[AnnotationDbi d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges limma NMF plyr S4Vectors scales shiny shinyBS shinydashboard SummarizedExperiment topGO]; }; + pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.16.0"; sha256="08c8ppxb6md10ar252xii7qgr6pjlbbiim9ap1giib7dyvzf4qjj"; depends=[AnnotationDbi Biostrings ellipse]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.64.0"; sha256="0dkvsh758hv16h6irhr8xy4sgsxp2ki1gpan33vyqq0fzlbibhxl"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcot2 = derive2 { name="pcot2"; version="1.40.0"; sha256="011p0935bkvlm12f0lbcflcprlzn34m25gj64169wp15lpygpcky"; depends=[amap Biobase]; }; + pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.36.0"; sha256="0f57fsp1aaz4sliqzamjma7shmiqfn82ggdcnzaysizn4r86gd4b"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pdmclass = derive2 { name="pdmclass"; version="1.44.0"; sha256="0mcd1s33j0l0nqma31dwh7wyx3vfbvw68rnlxksp5a6d6fx0sxlb"; depends=[Biobase fibroEset mda]; }; + pepStat = derive2 { name="pepStat"; version="1.6.2"; sha256="1a95f5sha96ww4y92qjycimclikd19x4dc5az9nha6c7v5l67nqw"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; + pepXMLTab = derive2 { name="pepXMLTab"; version="1.6.0"; sha256="1amgga42b7rds5k9c2m3is1s6lgh80sc8df7y9yfw1m09gwjg8vd"; depends=[XML]; }; + phenoDist = derive2 { name="phenoDist"; version="1.20.0"; sha256="1car8mpffbbabnh7fbsrk445y0ld45lz7953sbsbrfwd9chj4dk9"; depends=[e1071 imageHTS]; }; + phenoTest = derive2 { name="phenoTest"; version="1.20.0"; sha256="0bcg6qd51i9npskjsiflz5fl6135wchlk0pqpbnv0g33fzqvgrgi"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; + phyloseq = derive2 { name="phyloseq"; version="1.16.2"; sha256="12h69xckgsnl12mlmn7nard4pac42w5r8m8gj4vaml9w2hwlxcgq"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="1.12.1"; sha256="08zl41mv4wldpbnjhgqynp56csksz9x2ggy3v6axbsf4av08xl0p"; depends=[Biobase BiocGenerics gplots igraph marray relations]; }; + pickgene = derive2 { name="pickgene"; version="1.44.0"; sha256="0ilz8dcidximbrijy8a957hf6rxp54h45c36wmd90cbmxj54lv3c"; depends=[MASS]; }; + pint = derive2 { name="pint"; version="1.22.0"; sha256="01ydp1y039vq359ir7h13wl7avar8layx10r132488qdv7g65gnd"; depends=[dmt Matrix mvtnorm]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.38.0"; sha256="0rcrq32y3qi63ad8inc71y1gxydjc110lgz4bsvdkxykwmyxabgk"; depends=[graph RBGL]; }; + plateCore = derive2 { name="plateCore"; version="1.30.0"; sha256="00ccxrad5xfklwh2040hvp20wqqqgh0351qj00y11bmpz4ylng2p"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; + plethy = derive2 { name="plethy"; version="1.10.0"; sha256="0mvvhzacz1m4k9ig898r6kn7c1f7f96lky358km28gpk463cm3bp"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plgem = derive2 { name="plgem"; version="1.44.0"; sha256="07ygi6gvll2bnjwn8y4nmmgcz1daah0zzgidnwblzbyj4s2d4dam"; depends=[Biobase MASS]; }; + plier = derive2 { name="plier"; version="1.42.0"; sha256="0fqdvp75hz8c3k3779kdbl4xdjfqqvbd11vp0ad9jxan7j5giyca"; depends=[affy Biobase]; }; + plrs = derive2 { name="plrs"; version="1.12.0"; sha256="0pwpbpp05r95qcsk00icspna35lbw67d3h5apvgl4mibdw4jyvw4"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; + plw = derive2 { name="plw"; version="1.32.0"; sha256="114lpq9ksf8sbbcwvaczkmqgqqjfwpay1c82v192bmrhpjr3g6y4"; depends=[affy MASS]; }; + pmm = derive2 { name="pmm"; version="1.4.0"; sha256="1kh9h6033lq4mix4x4nw67dj6kw4y4k333i72swfki0vl6b43lip"; depends=[lme4]; }; + podkat = derive2 { name="podkat"; version="1.4.2"; sha256="0bfa2f04yr71vm1w9bqqij8gb68d5n5v1ydcnai016y7gkxxrb25"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; + polyester = derive2 { name="polyester"; version="1.8.3"; sha256="13visqfz6kpjqyqq8i6zwg7mr2f2p5rlk6pssysa8yc0j7bk1hrn"; depends=[BiocGenerics Biostrings IRanges limma logspline S4Vectors]; }; + ppiStats = derive2 { name="ppiStats"; version="1.38.0"; sha256="1z24495iy33qk7ymq08zrpl4kfv0s61slibsycn1diwhgshzglx3"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; + pqsfinder = derive2 { name="pqsfinder"; version="1.0.2"; sha256="0zqxr39lpzhlv22fdhlbihnr7hwwql94amhdvddbp25frdizmann"; depends=[BH Biostrings flowCore GenomicRanges IRanges Rcpp S4Vectors]; }; + prada = derive2 { name="prada"; version="1.48.0"; sha256="0209h2v72kqp6993kvfbddpc1s2qh880ag6j60lqfaz3zb09cd32"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; + prebs = derive2 { name="prebs"; version="1.12.0"; sha256="0rbas8hkzlsn1ch3pgwz8sh5siwfgdfr0hpr592vjp9mmxz4jl2j"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + predictionet = derive2 { name="predictionet"; version="1.18.0"; sha256="0b39arsfjxz43ybm479aisl5pc2n5z4vpva5whzr8z7qh382bfan"; depends=[catnet igraph MASS penalized RBGL]; }; + preprocessCore = derive2 { name="preprocessCore"; version="1.34.0"; sha256="0bcfi26ahs4ybagvz29vlp1wldhhbwwh73xz6v6xb07nakyzb6cf"; depends=[]; }; + proBAMr = derive2 { name="proBAMr"; version="1.6.0"; sha256="0r5sw67h8dwqbaizvaz7prch4jxzj6gfvcym1iv30nim7iadnd0m"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; + procoil = derive2 { name="procoil"; version="2.0.2"; sha256="0j3n3nxldwzv3pjn2djnk8ql97x6xppn0lhcz6nq4glwcdrly47b"; depends=[Biostrings kebabs S4Vectors]; }; + profileScoreDist = derive2 { name="profileScoreDist"; version="1.0.2"; sha256="0fl71nlvzl7gi96py4q63qkrd33xrpqcvld2jly7sv0cj2ng36nc"; depends=[BiocGenerics Rcpp]; }; + prot2D = derive2 { name="prot2D"; version="1.10.0"; sha256="1iy2lklhd4hmmf66z2yzs5bm8zmbcmdk52b0n6f4m1hlfwb0cv8n"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.12.1"; sha256="07ymi2m0vrnf4dzd0m6hard90y80k1v1r4i3ci8pa5mgfziws70s"; depends=[]; }; + proteoQC = derive2 { name="proteoQC"; version="1.8.2"; sha256="0z8swyyvwcw8phwnnsvjrvr21fh2m453k57b69sqb87hisczg2ra"; depends=[ggplot2 MSnbase Nozzle_R1 plyr Rcpp reshape2 rTANDEM seqinr VennDiagram XML]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.4.0"; sha256="1mw1d95fbq2b88by9hmil3vycrqbmpmg2kasx4grypiz1ximyngb"; depends=[BgeeDB biomaRt ggplot2 igraph RCurl reshape2 stringr topGO]; }; + puma = derive2 { name="puma"; version="3.14.0"; sha256="0pd87cd4qn81839vvlxcvivwnfl40rbgjqz1mrmv4rbwgqz1ail5"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.20.0"; sha256="0n62i5byxrw879q0gxd9sbg2by4cy76f8ngmbxnwpz4bnc8j6vpj"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.12.0"; sha256="0jcswb05gwrwc2zv3idzr0qcp7p1bn32xx8rhmq557aiirql1dib"; depends=[Biobase lme4 Matrix vsn]; }; + pwOmics = derive2 { name="pwOmics"; version="1.4.0"; sha256="121qvb2mlnq7as5bjb2xzq7y8gz4x47wg2z3s7s40zvglgpdjf03"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots igraph rBiopaxParser STRINGdb]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.10.2"; sha256="0mr0iabnj51wdhv9q5wifhisfl002dhddvscqpp78kycv12dvmga"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; + qpcrNorm = derive2 { name="qpcrNorm"; version="1.30.0"; sha256="127lqq0p80h920c5lf6k2ffng9fl3p78ivhnkk9y9drv2p2imr5f"; depends=[affy Biobase limma]; }; + qpgraph = derive2 { name="qpgraph"; version="2.6.1"; sha256="0y2dlaww0wyrmj73h50478fjzlg8cib6rsimzhrhh48gvgaw5whl"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qrqc = derive2 { name="qrqc"; version="1.26.0"; sha256="0r0gds35czs1xq5gv94n3c5i5gr2bjswij7l048npb8cqsmpvdq5"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; + quantro = derive2 { name="quantro"; version="1.6.2"; sha256="1rv0hihccq35cjf70vpk12y60w5kl9iwhhxx0fmjbax230v4vjmg"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + quantsmooth = derive2 { name="quantsmooth"; version="1.38.0"; sha256="1c69rrl8cijixlcr9kzcs3wfvgizvvrsyglqr8s10s23drrwywzb"; depends=[quantreg]; }; + qusage = derive2 { name="qusage"; version="2.4.0"; sha256="125mp6w9g335sjkf2894iycp98s5jcz3jljy0l6s46pbpy0hc77v"; depends=[Biobase limma lsmeans nlme]; }; + qvalue = derive2 { name="qvalue"; version="2.4.2"; sha256="08zcqxs6mrqxin01m998s9lglb9ylcb4p7sqd8am57z4qcqwwcra"; depends=[ggplot2 reshape2]; }; + r3Cseq = derive2 { name="r3Cseq"; version="1.18.0"; sha256="05rli70p45q10b7gk9k4fanw35ayljj6b6079phdsm1v7vnbdkw5"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.10.0"; sha256="1yzaj7fra1m4f89j5n1iqv9iiq9w9j5crscdhd2plm331nparhiv"; depends=[data_table XML]; }; + rCGH = derive2 { name="rCGH"; version="1.2.2"; sha256="0ysyhgnzb50222mjlyzawdw0xw10xw8isd5knj81hwn9x80ag6jp"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + rGADEM = derive2 { name="rGADEM"; version="2.20.0"; sha256="0m1nmab4xmw4v1b6nvb3x7f7kiq24rdw4xzh591qs90rl4r0y339"; depends=[Biostrings BSgenome IRanges seqLogo]; }; + rGREAT = derive2 { name="rGREAT"; version="1.4.2"; sha256="08daai2dwsahsnc1yzrnbs8bs2yadz2vd7fkpaigp4k6i9b0mvrm"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rHVDM = derive2 { name="rHVDM"; version="1.38.0"; sha256="0806iyx00mpi4jv9ff6x3ncfzvrk4smp60l91w5xldwysxmwn10q"; depends=[affy Biobase minpack_lm R2HTML]; }; + rMAT = derive2 { name="rMAT"; version="3.22.0"; sha256="00gg376hqxpg02vwv6qklgaivxj04bcb6d8vd6cvdnn43j2ffpdr"; depends=[affxparser Biobase BiocGenerics IRanges]; }; + rRDP = derive2 { name="rRDP"; version="1.6.0"; sha256="0rv2cj91w6xp7q066imgkw3r3yiwfvrl3qhm89nmnqbda8sgnw2i"; depends=[Biostrings]; }; + rSFFreader = derive2 { name="rSFFreader"; version="0.20.0"; sha256="067mykdwa1xzr0jhp95nmdvj4z0kp983vsimpcshqzpifv7xj32s"; depends=[Biostrings IRanges S4Vectors ShortRead XVector]; }; + rTANDEM = derive2 { name="rTANDEM"; version="1.12.0"; sha256="01ghsf4wr9pvssd6qs1jkxav53bw1mjyirik7992rdam7j9lidzr"; depends=[data_table Rcpp XML]; }; + rTRM = derive2 { name="rTRM"; version="1.10.2"; sha256="1lr3f2ysw8rwqb1l5x29vqsyp4934jl9jb3yjyqqbacgrfxf7syb"; depends=[AnnotationDbi DBI igraph RSQLite]; }; + rTRMui = derive2 { name="rTRMui"; version="1.10.0"; sha256="0j622hasfzqszsh09q9w4prv8dqbdy7hnyrrdvhbx2fkm1r6h9zp"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; + rain = derive2 { name="rain"; version="1.6.0"; sha256="07xcqq6wb81220l8c6hb8i2d9s8vysr577bb53khxsrqnv4am57w"; depends=[gmp multtest]; }; + rama = derive2 { name="rama"; version="1.46.0"; sha256="01xc7ys5505a8krb785w4l36yf7n050m4cdnk00vhkd60j0g6dy9"; depends=[]; }; + randPack = derive2 { name="randPack"; version="1.18.0"; sha256="08mnwj7lb7z6pffnpvilii6bphzb5vkc4f1fzyvgbbk3zvdcrajf"; depends=[Biobase]; }; + rbsurv = derive2 { name="rbsurv"; version="2.30.0"; sha256="1q89kz0wqixl6m9vp8x54255j2qjpkb60jd0y8a24kpphln54afq"; depends=[Biobase survival]; }; + rcellminer = derive2 { name="rcellminer"; version="1.4.2"; sha256="0256asrz6ivjvhkwskfk71q6n3xdgnjqbggp9lz8dvsk2wl8snrn"; depends=[Biobase fingerprint gplots rcdk rcellminerData shiny stringr]; }; + reb = derive2 { name="reb"; version="1.50.0"; sha256="0bi8jv4r5h7hbkn6m8wc2kv2qyadc0gvx16jkwsk5p450lh5c5ba"; depends=[Biobase idiogram]; }; + recoup = derive2 { name="recoup"; version="1.0.2"; sha256="09cgbdqv9q60dhd972mcgyrfcczv52idni69yj2c4jnbmx1224ks"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; + regionReport = derive2 { name="regionReport"; version="1.6.5"; sha256="0fa9vhx2as2agbij1scpsih5f31ksqdvvrfj7mn2d3rkz8sqi9a7"; depends=[DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.4.2"; sha256="0qn5say4gy9l1lli0i98i4amjqz75f390689dxn9ncfdcaqxkprw"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer]; }; + rfPred = derive2 { name="rfPred"; version="1.10.0"; sha256="1k1s7i9va0dnnii76nnhcv4g4a4b03rmhicl7hsbmy56fnx91qf9"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; + rgsepd = derive2 { name="rgsepd"; version="1.4.2"; sha256="0nj8x65q0642c6gimll84r2794bw41iz1iimqfznjkndv344a8g8"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.16.0"; sha256="1a1bwnwqfx40jfhf0cv6ajxdh4k9y9z5zm446cjdx8fw6garam3j"; depends=[zlibbioc]; }; + riboSeqR = derive2 { name="riboSeqR"; version="1.6.0"; sha256="0n4apcqgcyw71sypjkia45q61i4z35rq7r653i53fhsck4prwgzx"; depends=[abind GenomicRanges]; }; + rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.30.0"; sha256="0y5m2prpvg10xpidvihvzmywi08vhj23mi3xx9i49kn5jx46jiix"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.2.2"; sha256="0hfixw4fv0s38ar1faafvvm2z9jflh7lxzcmb8m8751b0wn9mkq2"; depends=[RColorBrewer]; }; + roar = derive2 { name="roar"; version="1.8.0"; sha256="1ymc4bgbi90nyz4lalrwr51n138vxr59f9lvr8j454ikdda6vpgs"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.0.3"; sha256="0irk8h8vgpxgcka1ad5grsxq6dw734flshlsyicv96kg3nb7qqrq"; depends=[Biobase httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.4.6"; sha256="1pls9c5l8lidj6cdvls3gk0mc1sy4374mbikn95fzj4vw46vcpaz"; depends=[]; }; + rpx = derive2 { name="rpx"; version="1.8.3"; sha256="1aq4hp38wiqv1p6lhjj8d759sr4sk6jy1jmnnb16ln4jls77hs7f"; depends=[RCurl XML]; }; + rqubic = derive2 { name="rqubic"; version="1.18.0"; sha256="0lv9xmip5prbkb4dha7lj7nii7wvk1wvcyad8chir76lks1ysdhn"; depends=[biclust Biobase BiocGenerics]; }; + rsbml = derive2 { name="rsbml"; version="2.30.0"; sha256="1q30yl7fny5rh1bai0z5gc5l7ci6qys0j59j417glc2pwsampcq4"; depends=[BiocGenerics graph]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.32.2"; sha256="190767zpwc7maqjpy0x5bpkm0jp1vfawy9991fifw0mc634cjkga"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; + sRAP = derive2 { name="sRAP"; version="1.12.0"; sha256="1wxg597ks3xa1srl8mwh90y09jc73758bfcw1pfwq2wpym5x6qsf"; depends=[gplots pls qvalue ROCR WriteXLS]; }; + sSeq = derive2 { name="sSeq"; version="1.10.0"; sha256="1w33zc6kaxm5ripji4n2gc0sk29fqq0nzv8nmddx3qwvhv1x91k2"; depends=[caTools RColorBrewer]; }; + safe = derive2 { name="safe"; version="3.12.0"; sha256="0f2i6zqc5x742r6501qsn0c8g0ld4lkvmvj6a2sjjacpj8g663am"; depends=[AnnotationDbi Biobase SparseM]; }; + sagenhaft = derive2 { name="sagenhaft"; version="1.42.0"; sha256="181sw6wdkv7c3sb9m9hfgd7ki3rv63p0k5mfhal7j48wphd1l8f9"; depends=[SparseM]; }; + sangerseqR = derive2 { name="sangerseqR"; version="1.8.2"; sha256="106p78f804b2ibkrkg6j2dxp6v9qsr03g4shkkcawb698qvgbr38"; depends=[Biostrings shiny]; }; + sapFinder = derive2 { name="sapFinder"; version="1.10.0"; sha256="0a5kq447l0f3mdml4ykcdvp4whqzc4pn3zsvzjhrxc06d4a91y5k"; depends=[pheatmap Rcpp rTANDEM]; }; + saps = derive2 { name="saps"; version="2.4.2"; sha256="191kmdf5czf96d7likysfxm13z240qd4z22n3dwdw94akpsfvrrp"; depends=[piano reshape2 survcomp survival]; }; + savR = derive2 { name="savR"; version="1.10.0"; sha256="14d3r64w00j99cd9wdlcxcyhlp278skyadn0dcmmjg2lfcwv9dj5"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; + sbgr = derive2 { name="sbgr"; version="1.1.1"; sha256="1z6xz5apv8cg6b0ciarvj0zn8s5xa93sfirzmldwsx9wmnm95kqq"; depends=[httr jsonlite objectProperties stringr]; }; + scater = derive2 { name="scater"; version="1.0.4"; sha256="1zmaml2mbj5fkxfnah5klm2kyx09fghqddmbb4084bz7w737s2by"; depends=[Biobase BiocGenerics biomaRt data_table dplyr edgeR ggplot2 limma matrixStats plyr reshape2 rhdf5 rjson shiny shinydashboard tximport viridis]; }; + scde = derive2 { name="scde"; version="2.0.1"; sha256="1d1wfcaxj7j4zhvs35038z7zdsn3idqhv1hb1s0bhhrvxyh95j1v"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; + scran = derive2 { name="scran"; version="1.0.4"; sha256="0z748nmy5z346anbv33p7knh489d556aghrwdpp8jjv8lqqy6fha"; depends=[Biobase BiocGenerics BiocParallel dynamicTreeCut edgeR limma Matrix scater zoo]; }; + scsR = derive2 { name="scsR"; version="1.8.0"; sha256="033f6kdmw70mf2hjadsanb1wx5wgnj69ipixb4n16262bvz54ajy"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.6.0"; sha256="07xh6gpi1pprinza2vswjpihff7hjqzsj3j6yrqmrhyja63n0ni8"; depends=[baySeq GenomicRanges IRanges S4Vectors ShortRead]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.4.0"; sha256="19r1gpmpzrxiyjx7gila1ldn714k15whhjg25kv79s2ji5fsqcrb"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCNA = derive2 { name="seqCNA"; version="1.18.0"; sha256="16hbmzlc69jpirl8yix3lnx3hbw7jdj7njwxar47w3r3vbqhc7xg"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; + seqLogo = derive2 { name="seqLogo"; version="1.38.0"; sha256="01jddx62nhi3r7czbh9hxy0wwpazbc9ax1fgagfxl6p4kx9xz9rb"; depends=[]; }; + seqPattern = derive2 { name="seqPattern"; version="1.4.0"; sha256="1dj9hfnbdj11yjxwd8jmxrdkj7n6gmaaj6244g2psgarhjcp4wfb"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; + seqTools = derive2 { name="seqTools"; version="1.6.0"; sha256="1xzc2457rjnc901dq0jaqpya04cxmk9c1y41495hmx5yimls2hnj"; depends=[zlibbioc]; }; + seqbias = derive2 { name="seqbias"; version="1.20.0"; sha256="0yhzc8iyiqja93d919sh8jxnxq4wkydfbiygk8g3h45amzzx3iwb"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; + seqplots = derive2 { name="seqplots"; version="1.10.2"; sha256="0dd6pmmidbkrr1gxflly1skj8qk3h882jas0a49ibmyyhgydffqx"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 RSQLite rtracklayer S4Vectors shiny]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.2.8"; sha256="1b8l26anjq1bv1x71y1py3807kv4f9wzc4n2fxdgrvzdkimmnymp"; depends=[curl docopt dplyr httr jsonlite liftr objectProperties rstudioapi S4Vectors stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.6.2"; sha256="0q7lkmyh2hrxfmv5vl42d35hrgisc6x0iwgw9ahdiskmp13dwjqs"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.10.0"; sha256="0xg5mhkgdpx12x9ys9w9bfqrg2595av88g975p50k2wikv9map14"; depends=[mixtools rTANDEM shiny xtable]; }; + sigPathway = derive2 { name="sigPathway"; version="1.40.0"; sha256="0q1xwm87ia1zp5ry5pk5qb2rcxfi2s4ifiyn4yi24a7n2byanqy4"; depends=[]; }; + sigaR = derive2 { name="sigaR"; version="1.15.0"; sha256="0z1nkxafiv71virpgsb32ji6z88yb9r6w7jvp2ck5yqxvv0brsg2"; depends=[Biobase CGHbase corpcor igraph marray MASS mvtnorm penalized quadprog snowfall]; }; + siggenes = derive2 { name="siggenes"; version="1.46.0"; sha256="05adv1phvj8x9f1rnd2cz1xxyfbyk6zl0004vgfnsipklqy22z2c"; depends=[Biobase multtest]; }; + sigsquared = derive2 { name="sigsquared"; version="1.4.0"; sha256="0683my2rflshlgx9nhamqvp3fqnxp0fb8jj14wqh29drrx6v93jk"; depends=[Biobase survival]; }; + similaRpeak = derive2 { name="similaRpeak"; version="1.4.2"; sha256="1rdpf77mbqrs4ja0f9298qp8jfcwxl2hcbxk0ss5aia1cds8g475"; depends=[GenomicAlignments R6 Rsamtools rtracklayer]; }; + simpleaffy = derive2 { name="simpleaffy"; version="2.48.0"; sha256="1v16zgqz2kg943lcwdc6v2hwq4ngd0qw9611pv145ysd4bx6p92l"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; + simulatorZ = derive2 { name="simulatorZ"; version="1.6.0"; sha256="1bxpk4kigaymfgnf723s9pyfgpckhqfryjbz6b572jadf3swdjhc"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; }; + sincell = derive2 { name="sincell"; version="1.4.2"; sha256="0hdx2wzs6z5birxvin0xp0xvh0zrpmbwzxgralv2aghkv21ji5l6"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + sizepower = derive2 { name="sizepower"; version="1.42.0"; sha256="0c17hs0yqqi92c1f27s7nh0vr1y6ak06mrv8m537w98cr659vlas"; depends=[]; }; + skewr = derive2 { name="skewr"; version="1.4.2"; sha256="0k11mvxkrgqx5gxzi2li7pdw44zdvdyb41yh0wjqxn413qj67jp2"; depends=[IlluminaHumanMethylation450kmanifest IRanges methylumi minfi mixsmsn RColorBrewer wateRmelon]; }; + snapCGH = derive2 { name="snapCGH"; version="1.42.0"; sha256="10fap32vzbjwpgvbq4i1jh8sca0bdcza9xzw7mmw8cnr20ddv388"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; + snm = derive2 { name="snm"; version="1.20.0"; sha256="15nh0p79jpwdzd3l2yzc0kfg9gbl5y5cjzbvcvklpprhh11s787r"; depends=[corpcor lme4]; }; + snpStats = derive2 { name="snpStats"; version="1.22.0"; sha256="1hyznmdgjl96jf8aisa5nyjp4in74vn5nhipwxnc8g65j8qlmgdv"; depends=[BiocGenerics Matrix survival zlibbioc]; }; + soGGi = derive2 { name="soGGi"; version="1.4.4"; sha256="0wdg7p5rmfdhqy7294h99pf84l1hfpqmjkvmxkx87p1a8590a9nl"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + spade = derive2 { name="spade"; version="1.20.0"; sha256="17x550ixg8f8gcjg3sc80v7bimzbvdi687m3znavkdpw03v7jcg9"; depends=[Biobase flowCore igraph Rclusterpp]; }; + specL = derive2 { name="specL"; version="1.6.2"; sha256="1kg6zhrd7fp07jl0njd54z4m4886drkks0b8k4w17vdxw2cpajc5"; depends=[DBI protViz Rcpp RSQLite seqinr]; }; + spikeLI = derive2 { name="spikeLI"; version="2.32.0"; sha256="0qk447fyrfj0ha0faf62i2h5hv8wnyfng42jkqcn8k391ga33w03"; depends=[]; }; + spkTools = derive2 { name="spkTools"; version="1.28.0"; sha256="1b76k0jp4dk2w53q8d536jfjznfdy1f2a8s44klm1rn3qw0nfp4c"; depends=[Biobase gtools RColorBrewer]; }; + spliceR = derive2 { name="spliceR"; version="1.14.0"; sha256="09c6h8xlfpfsnxvndf9zab9kiv4kfx4j3jqqm6f5ry25y1ixv49c"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; }; + spliceSites = derive2 { name="spliceSites"; version="1.20.0"; sha256="12j2mx7al7yxzhb3g6xy7v85vjipmfw0sa5nb3c3kh711r2485mj"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; + splicegear = derive2 { name="splicegear"; version="1.44.0"; sha256="02kzm95hnn1b9384qpndqxfrc9916i50rynpw52131rjzhy2qkqy"; depends=[annotate Biobase XML]; }; + splineTCDiffExpr = derive2 { name="splineTCDiffExpr"; version="0.99.4"; sha256="0b14hyrh2fa02yh2cvr2xjmrq81y46r6lrc6pzybi6mv3gpkdr6j"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splineTimeR = derive2 { name="splineTimeR"; version="1.0.1"; sha256="1ham5hzfcv2ws9j8j07fzhvzij7fdnpnddd24sqb2w4l5p8sjj1z"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splots = derive2 { name="splots"; version="1.38.0"; sha256="0pq9xgylc3qq3pzfizg25c3m6l64zvkc94xa5i8sm0v49161rjh9"; depends=[RColorBrewer]; }; + spotSegmentation = derive2 { name="spotSegmentation"; version="1.46.0"; sha256="1hbvxfcwpaz5gbkvnsnravd9zdghkl2kqwx6mhznjbzggjp5hf1i"; depends=[mclust]; }; + sscore = derive2 { name="sscore"; version="1.44.0"; sha256="14wl2chv9xrfn02s8dif0pa6nq41dbv5n9q2sjp1rgbknhs92l4f"; depends=[affy affyio]; }; + sscu = derive2 { name="sscu"; version="1.0.2"; sha256="0rflgvb8anzrv5y9rzm8aiaappafyjmmak39mvz6b3mm1a32zwkq"; depends=[BiocGenerics Biostrings seqinr]; }; + ssize = derive2 { name="ssize"; version="1.46.0"; sha256="161k421x32wp2qs705p7i7hqcf53sdmw5vllnwiqfidw62xagiya"; depends=[gdata xtable]; }; + ssviz = derive2 { name="ssviz"; version="1.6.2"; sha256="11w4y3fv5m9qxp998k9xm9w1vg0v34npqm9s05biv0qqxwgs9v36"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + staRank = derive2 { name="staRank"; version="1.14.0"; sha256="1fn9m8q834v8540q8m2n9vfxdzqz2mbxb5k7mnjljf9ja07da9l8"; depends=[cellHTS2]; }; + stepNorm = derive2 { name="stepNorm"; version="1.44.0"; sha256="1l21pw9d2scp9jczf0d4mscvd5qjqkrn4maxx9k2l2kqz47bh1dc"; depends=[marray MASS]; }; + stepwiseCM = derive2 { name="stepwiseCM"; version="1.18.0"; sha256="1375hwx4zln7mnscfd6w7k4x6jc34m6mqs8fxmnihvkq4imhxd58"; depends=[Biobase e1071 glmpath MAclinical pamr penalized randomForest snowfall tspair]; }; + subSeq = derive2 { name="subSeq"; version="1.2.2"; sha256="04qg83x7cmjsnzg925jx8aw83gpzynkqdgxy4n44rxqspw922f11"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.10.0"; sha256="1kzkkidlr034m0sgyb32zia0p47gi52l6ki7s88559h7gx5d7bg1"; depends=[ape hexbin MASS]; }; + survcomp = derive2 { name="survcomp"; version="1.22.0"; sha256="0l6plsjfbpx0lxkyscfnbykinjcijp1bwbrqn4i76y003g91b4yz"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + sva = derive2 { name="sva"; version="3.20.0"; sha256="0jqa4rdd0cd546sc1dbsq1lrm3kqcfym77xr7rsmrpc12yp85xdv"; depends=[genefilter mgcv]; }; + switchBox = derive2 { name="switchBox"; version="1.6.0"; sha256="0ys69bh12b9idni67v1phfm1nik9z8izpix3az4xhy253gsb3idz"; depends=[]; }; + synapter = derive2 { name="synapter"; version="1.14.2"; sha256="1wql8q8fbkl16g1xczrbcd68g41c35rfyqyrb6cj250axjl5x2q4"; depends=[Biobase BiocParallel Biostrings cleaver hwriter knitr lattice MSnbase multtest qvalue RColorBrewer]; }; + synlet = derive2 { name="synlet"; version="1.2.2"; sha256="1rgsfxjkfv546c285cwp740gcglfjg8sbf0hw9v1dmqa16fy3pss"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.6.4"; sha256="0s2g46a5d5bvx45i3cgmib48wf8hrniyladhm0f7kgcbfx57248m"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.10.0"; sha256="0dylpkmz91gvl6zsi501yqg5kf0sagb4f6bcdb9gl68r3vbmkxnm"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; }; + ternarynet = derive2 { name="ternarynet"; version="1.16.0"; sha256="0xzvvhgmbka28ka6q2inkfgc3lgi6007apndw6gb33548by7l30p"; depends=[igraph]; }; + tigre = derive2 { name="tigre"; version="1.26.0"; sha256="0k9sjq3qxji7zsgjmy8zp0744zw17w86i2rf7yqapw2khgk80pdh"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tilingArray = derive2 { name="tilingArray"; version="1.50.0"; sha256="03m6xcrs80a9kc63wawrnynxbydr54qfc2azfjj28qjb38cij792"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; + timecourse = derive2 { name="timecourse"; version="1.44.0"; sha256="09m2laz25wmlch2r657q97ii1gryhs04yva8ym9a2z7dpypr4hpp"; depends=[Biobase limma marray MASS]; }; + tkWidgets = derive2 { name="tkWidgets"; version="1.50.0"; sha256="1dazx95p1751kzdf0k8a1kbbbq6d258ga53j71gnbzskg2pmr3s9"; depends=[DynDoc widgetTools]; }; + tofsims = derive2 { name="tofsims"; version="1.0.2"; sha256="0yyxwhhj6nqfxclzp05dsm8ydpvcxld73rd2qnq2xplffx9db45v"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + topGO = derive2 { name="topGO"; version="2.24.0"; sha256="1p4vsl32qhjw15yv9ym01ni63gjg73jaghlf17wc4zfn3iaz2zar"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + trackViewer = derive2 { name="trackViewer"; version="1.8.4"; sha256="0qzqzqqpajdv8srr59i7qxwn90vf0xdshnlchmn2v6k4949n3jcj"; depends=[AnnotationDbi GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz IRanges pbapply Rsamtools rtracklayer scales]; }; + tracktables = derive2 { name="tracktables"; version="1.6.2"; sha256="1mx924d22w794gx3n5xdl711ajyxpmfwfx1x496cbcy9fqbc38sm"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; + transcriptR = derive2 { name="transcriptR"; version="1.0.2"; sha256="08jbwajdbjx8jj7snfihyf4nzh72af4cj4grgvv5j0lqymvkziv6"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + traseR = derive2 { name="traseR"; version="1.2.0"; sha256="1mpvb38zg13b28s9fp3lm1m4gv002kaq7fqgxjnhk743bs4zqwbp"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; + triform = derive2 { name="triform"; version="1.14.0"; sha256="1rfrqa5k2sfsyxpjjhs9scjgz1qzqgks13xxppz64sdlpjgrr8zw"; depends=[BiocGenerics IRanges yaml]; }; + trigger = derive2 { name="trigger"; version="1.18.0"; sha256="1vzp9xlq2i6g659i4v1bbmh396lqwac3iwzx10kxjadzsp3kmd30"; depends=[corpcor qtl qvalue sva]; }; + trio = derive2 { name="trio"; version="3.10.0"; sha256="07a20anzcg98nvbwkb1y3wna7kp4wwh2r994gnajl9lpp4ya8v4m"; depends=[]; }; + triplex = derive2 { name="triplex"; version="1.12.0"; sha256="0562c7i9y3ajb6krqxfg2l7hmv8x9qrd7jqm1pkv7mb507yw3ijr"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; + tspair = derive2 { name="tspair"; version="1.30.0"; sha256="1di6h6hm5bjl7j3hnnblfi042i0pj6rlzigprbz41spppassvg28"; depends=[Biobase]; }; + tweeDEseq = derive2 { name="tweeDEseq"; version="1.18.0"; sha256="1i15pjvyz1idzam54d93f5i0693gjwqnnr97a6i2k7mnng859ik1"; depends=[cqn edgeR limma MASS]; }; + twilight = derive2 { name="twilight"; version="1.48.0"; sha256="1mz8967fkjkyv75j6ahxrygvlwi1cmjiag4vd9gi6jrqqbpj0hdg"; depends=[Biobase]; }; + tximport = derive2 { name="tximport"; version="1.0.3"; sha256="14j85aw1hhszaajnk7pj02bsj0id2y70ja94njxcr3j3rax1ngg0"; depends=[]; }; + unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.8.0"; sha256="1fa5nmdfg52kppvxri08x97zb03c5fq2mz78jpcjaryhcz1jcpr8"; depends=[BiocGenerics HTqPCR]; }; + variancePartition = derive2 { name="variancePartition"; version="1.2.11"; sha256="01525cbxgh9q4dnwn8ynrc1ixg9b98k7yn59svj6pdxmi2b9a58q"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 MASS pbkrtest reshape2]; }; + vbmp = derive2 { name="vbmp"; version="1.40.0"; sha256="0b6dw8z2lvzlfafc0p38x0skwgayafznvcwc813rkb2jcfac3q5h"; depends=[]; }; + viper = derive2 { name="viper"; version="1.7.4"; sha256="12hyvy6dz67r3aybg4cbkzayb3j4vm0vi5ib2y9lq4195fp6ffxr"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vsn = derive2 { name="vsn"; version="3.40.0"; sha256="0cqx7kar7ihhbqdk37zhj6w5g1nw04l10vwnw2gxwm2y4229skh4"; depends=[affy Biobase ggplot2 hexbin lattice limma]; }; + vtpnet = derive2 { name="vtpnet"; version="0.12.0"; sha256="0yq4h1pv7vkhwmk1vq0nahzyw6wnbvhlmw0rgggzbdc0irp99yj7"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.17.0"; sha256="1xhqv5hrxivw924snl1nb0biir39mzwc3m8d9qczhn52ds04wsn1"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.6.2"; sha256="0dbjkpajs4src5kgymin7b4h4yciksa112s52fm116mfll0g1rxl"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; + waveTiling = derive2 { name="waveTiling"; version="1.14.0"; sha256="1yfvzb0k5b495460b1k2229h3qcx7gva48lc419r2y9dlnajii3d"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; + weaver = derive2 { name="weaver"; version="1.38.0"; sha256="1g6796sw321la3rh4s28xzfv5wr91f4xva965sccl5l4vxqs5ccr"; depends=[codetools digest]; }; + webbioc = derive2 { name="webbioc"; version="1.44.0"; sha256="0wd6xdnp3qcinj7sgl1hizl674v65n9xjbw0haf1xyrlijakpn7h"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; + widgetTools = derive2 { name="widgetTools"; version="1.50.0"; sha256="191agm9c0g43wbncya8dnrgssx5s84i5w147na84g37r6b9cn67y"; depends=[]; }; + xcms = derive2 { name="xcms"; version="1.48.0"; sha256="0xynzbvsknyyh5zdnh8mgs7rjf53m3fkhwqqi116lscqmf89scda"; depends=[Biobase BiocGenerics lattice mzR ProtGenerics RColorBrewer]; }; + xmapbridge = derive2 { name="xmapbridge"; version="1.30.0"; sha256="17nccdcnwvi4vj2ykc0adq0018prfxpkzk78s315gx2l0ywkzmv4"; depends=[]; }; + xps = derive2 { name="xps"; version="1.32.0"; sha256="0clajv5qpv6z9hhq4ns5gjys1zb5k1r6bngpjfm0g2k8alaj82rk"; depends=[]; }; + yaqcaffy = derive2 { name="yaqcaffy"; version="1.32.0"; sha256="16sif5lsfczrl811g7237yg5pw8am2q7m9yk7zfkh3l07lr75zni"; depends=[simpleaffy]; }; + zlibbioc = derive2 { name="zlibbioc"; version="1.18.0"; sha256="0m8l7zpx1l3qsk73k3ibkxxzzff938x3qhnwki1ymf3cnsg8cb36"; depends=[]; }; } diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index 92f79b7a36a..b2cb8857db7 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,527 +4,675 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2016-03-23"; }; +let derive2 = derive { snapshot = "2017-02-23"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; - ABCanalysis = derive2 { name="ABCanalysis"; version="1.1.0"; sha256="09s38xr6cig88v1nb8a192yc19rnhnqsfzazgfa257c7h84l0g9q"; depends=[Hmisc plotrix]; }; - ABCoptim = derive2 { name="ABCoptim"; version="0.13.11"; sha256="1j2pbfl5g9x71gq9f7vg6wznsds8sn8dj3q2h5fhjcv58di3gjhl"; depends=[]; }; + ABC_RAP = derive2 { name="ABC.RAP"; version="0.9.0"; sha256="1kdspln17v0krvahcd55vib4dv5azp60b3r1zf489x10qqbp1mxk"; depends=[]; }; + ABCanalysis = derive2 { name="ABCanalysis"; version="1.1.2"; sha256="1z7m8j6zqai7kg5b00wmv7hjndpb29s6819bshwrqc7z0vz71491"; depends=[plotrix]; }; + ABCoptim = derive2 { name="ABCoptim"; version="0.14.0"; sha256="0nqnflidknwxj4bzql486cs4fi51iwyw73b5sdf26s705hkknhj0"; depends=[Rcpp]; }; ABCp2 = derive2 { name="ABCp2"; version="1.2"; sha256="1s2skkxpzss7c29i8600psgrp0hl46jcrxqrmy2b4db8hc0kcnbx"; depends=[MASS]; }; ABHgenotypeR = derive2 { name="ABHgenotypeR"; version="1.0.1"; sha256="08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"; depends=[ggplot2 reshape2]; }; ACA = derive2 { name="ACA"; version="1.0"; sha256="0z4wz85iv5k5vw29m6xfh2v96shv314nbxkv3v3yhl77br4bmj4q"; depends=[]; }; ACCLMA = derive2 { name="ACCLMA"; version="1.0"; sha256="1na27sp18fq12gp6vxgqw1ffsz2yi1d8xvrxbrzx5g1kqxrayy0v"; depends=[]; }; ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; }; - ACDm = derive2 { name="ACDm"; version="1.0.3"; sha256="1gqqm9lyc9pmqxj21a1mnf29jpq5aqsfny5wzlp2d8g49dc5hqri"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; }; - ACEt = derive2 { name="ACEt"; version="1.4"; sha256="1837jindb5bffp7gxp66ffx4z6ardm5g9axm3d42vvbm6m67klc4"; depends=[BH MASS Rcpp RcppArmadillo]; }; + ACDm = derive2 { name="ACDm"; version="1.0.4"; sha256="0b4f02ga5ra66mbrm79g0bnlzmii82rks9kmxixxqgf18yhlyjil"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; }; + ACEt = derive2 { name="ACEt"; version="1.7.1"; sha256="1h0lfzz3ydkr8idbsqhddcwsc0q7rschgypf4vb4v62f636fxw9b"; depends=[BH MASS Rcpp RcppArmadillo]; }; ACNE = derive2 { name="ACNE"; version="0.8.1"; sha256="0kzapsalzw6jsi990qicp4glijh5ddnfimsg5pidgbwxg4i05grl"; depends=[aroma_affymetrix aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; - ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.01.29"; sha256="1b1243wkncanm1blkqzicjgzb576vzcg4iwinsgn2xqr7f264amf"; depends=[ggplot2 gridExtra scales]; }; + ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.8.25"; sha256="0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"; depends=[ggplot2 gridExtra scales]; }; ACSWR = derive2 { name="ACSWR"; version="1.0"; sha256="195vjrkang5cl7gwsna0aq4p0h4jym9xg9yh94bnf8vq6wf8j83n"; depends=[MASS]; }; - ACTCD = derive2 { name="ACTCD"; version="1.0-0"; sha256="0zn8f6l5vmn4w1lqjnpcxvfbr2fhwbhdjx4144h3bk71bk9raavl"; depends=[R_methodsS3]; }; - ADDT = derive2 { name="ADDT"; version="1.0"; sha256="1jx7rxi0yfn34pf3cf9zpf434rapgn5qn2mn5rkq5lysr3kwdw91"; depends=[]; }; + ACTCD = derive2 { name="ACTCD"; version="1.1-0"; sha256="15l70diy1x2pfyv8miki76frnk3f33qfxcxafh6cp8zwc6gmr0m4"; depends=[R_methodsS3]; }; + ADCT = derive2 { name="ADCT"; version="0.1.0"; sha256="1glf83ydx4v3ld8c4gb9h3jk6srd054bis5l8k57p1ba4fnqnnpp"; depends=[mvtnorm]; }; + ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; }; ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; }; ADM3 = derive2 { name="ADM3"; version="1.3"; sha256="1hg9wjdhckilqd13dr4cim4j6jsh2sdwm18i3pfmfdj8cyswm3h0"; depends=[]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1"; sha256="15f1zhgv7xai954qz2ahj4kpxyvr2svxpmybz7j43bhjpkq72dmq"; depends=[Matrix Rcpp RcppEigen]; }; - ADPclust = derive2 { name="ADPclust"; version="0.6.5"; sha256="0ni8hkpn11cqrm56w2l4x7fwhw7lls3msf0g8bd62nkwzygqzzrn"; depends=[cluster dplyr fields knitr]; }; - AEDForecasting = derive2 { name="AEDForecasting"; version="0.10.0"; sha256="080qg8s616nx1pj7bdpg3ify2qm3l0gni40nx1xdh81920vj8n7y"; depends=[changepoint forecast signal]; }; - AER = derive2 { name="AER"; version="1.2-4"; sha256="0cfhnh6ijwvbywk6falfq852jgx969v35j2l1q3cghwj9yggapbh"; depends=[car Formula lmtest sandwich survival zoo]; }; - AF = derive2 { name="AF"; version="0.1.2"; sha256="18bw6c9nlcqcxib4mzhxsjqyjj29xqqvpw668jg2ssqkdphnvzkl"; depends=[data_table drgee survival]; }; + ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; + AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; + AER = derive2 { name="AER"; version="1.2-5"; sha256="0qksj91h1c5kaci0w7q1n6780669di146ll5wnbjppnkz57z237g"; depends=[car Formula lmtest sandwich survival zoo]; }; + AF = derive2 { name="AF"; version="0.1.4"; sha256="1ych5b2bin65lk415l8rhql2cpma3djnxvdi8ja1hgd9absm7j04"; depends=[data_table drgee stdReg survival]; }; AFLPsim = derive2 { name="AFLPsim"; version="0.4-2"; sha256="0bbbvv81nxqp5gc4hdhk0hyhb4n8f9w83kf21cgmqhy9cqnyr4s8"; depends=[adegenet introgress]; }; - AFM = derive2 { name="AFM"; version="1.2.0"; sha256="070jd8b8l4f94zp83i7w69fbym0p2sc4vdlfxzzp5ih438i1p0wi"; depends=[data_table fftwtools fractaldim ggplot2 gridExtra gstat igraph moments plyr png pracma rgl rglwidget shiny shinyjs sp stringr]; }; + AFM = derive2 { name="AFM"; version="1.2.2"; sha256="132zbxim3cbyxhv27l9i3jyhf5c47ckzsg4qndpwbyjhd0p9x7qh"; depends=[data_table dbscan fftwtools fractaldim ggplot2 gridExtra gstat igraph moments plyr png pracma rgl scales shiny shinyjs sp stringr]; }; AGD = derive2 { name="AGD"; version="0.35"; sha256="1dk8m3zqvapwhz0677d3b2cbrin14p9adn5annzgjrxgw7ms4mg0"; depends=[gamlss gamlss_dist]; }; - AGSDest = derive2 { name="AGSDest"; version="2.3"; sha256="1g8z7ba70zs4i8cb48iwf4iy1q1l76cpiixiac8fixjf1c7a9hxz"; depends=[ldbounds]; }; - AHR = derive2 { name="AHR"; version="1.3"; sha256="0i1dqv1prb8iir1rykbhfsl99x05cl582z47wqr7mwkkqf826x9g"; depends=[etm MASS Rcpp RcppArmadillo survival]; }; - AICcmodavg = derive2 { name="AICcmodavg"; version="2.0-4"; sha256="08ry3m4a464gw2j1n528p2fim4flnfy4gbyb1yald001499wdm5v"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; - AID = derive2 { name="AID"; version="1.5"; sha256="0fpgq2ahl0mdj0sb0p39z2ksslsiwm3hma8d09jmggi3yjbrgqq7"; depends=[MASS nortest tseries]; }; + AGSDest = derive2 { name="AGSDest"; version="2.3.1"; sha256="10jakc2qs5gnbp0g4k05isy0ii73ric50gmwkbb1khf9x0b5v6dg"; depends=[ldbounds]; }; + AHR = derive2 { name="AHR"; version="1.4.2"; sha256="15khncbbnpbvj6rcn6rklzhv5a0mmfyjljv77bsx96zfis7mk2d7"; depends=[etm MASS Rcpp RcppArmadillo survival]; }; + AICcmodavg = derive2 { name="AICcmodavg"; version="2.1-0"; sha256="0zksb2qxb1q054kwg4acp94hxqiasd0yw1bkllp2r38640bvlj3b"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; + AID = derive2 { name="AID"; version="1.7"; sha256="0c0057rp10aav41z7ilppbv8gsqf8ik2srygr5wx95b7hl1a4cvb"; depends=[MASS nortest tseries]; }; + AIG = derive2 { name="AIG"; version="0.1.1"; sha256="0llsfx6nfkhz37vdqd1mjbv0sh3v2q9drk7dml5qzdxkqxbbcyi6"; depends=[dplyr mgcv]; }; AIM = derive2 { name="AIM"; version="1.01"; sha256="11lkfilxk265a7jkc1wq5xlgxa56xhg302f1q9xb7gmjnzdigb21"; depends=[survival]; }; - ALDqr = derive2 { name="ALDqr"; version="0.5"; sha256="0294d6cjfl5m63jhrv4rbh7npwrbmmw5101jz5bbwihhj94qcxp9"; depends=[HyperbolicDist]; }; + ALA4R = derive2 { name="ALA4R"; version="1.5.6"; sha256="0fj5y6z179glhc2jj3ksd5w29xmlqm71n23hp1vynrza70fz0gna"; depends=[assertthat digest httr jsonlite plyr RCurl sp stringr wellknown]; }; + ALDqr = derive2 { name="ALDqr"; version="1.0"; sha256="0gk8hxh4p0fi47sf1zsvvxxbzp38vzk60wh8hmc63phnjab6qkv4"; depends=[HyperbolicDist sn]; }; ALKr = derive2 { name="ALKr"; version="0.5.3.1"; sha256="09df3vx2q0sn8fwz2cc9lckzwrf2hgbglzyn376d6nkrm6gq792a"; depends=[MASS Rcpp]; }; ALS = derive2 { name="ALS"; version="0.0.6"; sha256="1swrn39vy50fazkpf97r7c542gkj6mlvy8gmcxllg7mf2mqx546a"; depends=[Iso nnls]; }; ALSCPC = derive2 { name="ALSCPC"; version="1.0"; sha256="0ippxzq5qwb9dnpvm1kxhc0fxh83rs9ny5rcvd30w2bp632q9qdx"; depends=[]; }; + ALSM = derive2 { name="ALSM"; version="0.1.9"; sha256="11lj493wpf2hkk6cim93qad9ikqq1ni5i65xbpzj1qwq8zv7bdzk"; depends=[car leaps SuppDists]; }; ALTopt = derive2 { name="ALTopt"; version="0.1.1"; sha256="0frpnycnljz6r24cg4z99ivm3rbg9j1nxfkhw18vbrb7gcl1hqj6"; depends=[cubature lattice]; }; AMAP_Seq = derive2 { name="AMAP.Seq"; version="1.0"; sha256="0z0rrzps6rm58k4m1ybg77s3w05m5zfya4x8ril78ksxsjwi3636"; depends=[]; }; - AMCP = derive2 { name="AMCP"; version="0.0.2"; sha256="1ljsb2p7f1cq6qkzcd88a43qcd61myf5xirqcjbjs8rkmj49mg4l"; depends=[]; }; + AMCP = derive2 { name="AMCP"; version="0.0.4"; sha256="051xvnr4zc25w00kh4gkffgigmhmcbqpwh9654jv37glr8ip2v3l"; depends=[]; }; AMGET = derive2 { name="AMGET"; version="1.0"; sha256="18wdzzg5wr7akbd1iasa4mvmy44fb2n5gpghwcrx80knnicy3dxq"; depends=[]; }; + AMModels = derive2 { name="AMModels"; version="0.1.2"; sha256="0503vwagrlg14f8n15p7jsz25mvmjinr1cyns24hpp4y2fgbc56s"; depends=[unmarked]; }; AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-15"; sha256="00zfqcsah2353mrhqkv8bbh24l8gaxk4y78icr9kxy4pqb2988yz"; depends=[]; }; + ANLP = derive2 { name="ANLP"; version="1.3"; sha256="1m1jnfaqny6qprgyk4f3naan5i5cildawv322h6mc25nypwl12m4"; depends=[dplyr qdap RWeka tm]; }; ANOM = derive2 { name="ANOM"; version="0.4.3"; sha256="0ayz5jl7pkz07n0dv4q99n3b47dwxj2ry6x4zc5xz5mgs5pgv2nl"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; - APSIM = derive2 { name="APSIM"; version="0.8.3"; sha256="0c4ywixbjc3bdckaqh3mcwb8p0jf65yyd8x0rdqwvj9j3b6d7kj3"; depends=[data_table lubridate plyr sirad stringr]; }; + APSIM = derive2 { name="APSIM"; version="0.9.1"; sha256="0ws9zl2c5m58j0rpbhkpd1rs0pasd4fazd25xw7b3s9b738clfwa"; depends=[data_table lubridate plyr RSQLite sirad stringr]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; + APfun = derive2 { name="APfun"; version="0.1.0"; sha256="0iq008pq7drkl3d1m5qrhpqmmpvzxcbknax57lfzh5nxk657zx03"; depends=[]; }; + APtools = derive2 { name="APtools"; version="3.0"; sha256="0v5xgznc8hvw3gid8x5chksc62zpwbx34qsh64sv7d1kqmh5w26j"; depends=[survival]; }; AR1seg = derive2 { name="AR1seg"; version="1.0"; sha256="0v9adx5wj9r4jwl3bqqmj0byiqfp585jz013qfqrq601wj8v4zi3"; depends=[Segmentor3IsBack]; }; + ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; ARPobservation = derive2 { name="ARPobservation"; version="1.1"; sha256="1cdhn11jf1nf03jyvs17ygmjq9pb5rvmyyrq9fp7ifmvcgbkwsms"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTIVA = derive2 { name="ARTIVA"; version="1.2.3"; sha256="1jdvsslc8parz7wibcv51fx62brl2mc6i482hz43j1npsms2z1hl"; depends=[gplots igraph MASS]; }; ARTP = derive2 { name="ARTP"; version="2.0.4"; sha256="1f6ay9lyaqsc33b0larb8v6imp5adaycya84wif2sg32rv4gx3yl"; depends=[]; }; - ARTP2 = derive2 { name="ARTP2"; version="0.9.22"; sha256="0vhnhf72x1af77lq8rnqq98hpv5l57by2qm1zxpjvpgpqa5s49ak"; depends=[data_table Formula]; }; - ARTool = derive2 { name="ARTool"; version="0.10.0"; sha256="0y36lghpnhz8fb0gsq4h8mq8y79b2k22wgr7rxj0n12y55xkj028"; depends=[car dplyr lme4 magrittr plyr]; }; - ASMap = derive2 { name="ASMap"; version="0.4-5"; sha256="1hrvxkhmycqldah3j1wkja0g7mdx24lyc6gp2x1pnx9fqjanwfy2"; depends=[fields gtools lattice qtl RColorBrewer]; }; + ARTP2 = derive2 { name="ARTP2"; version="0.9.30.1"; sha256="1jn1ai19s1jrrhl6nm7miw46l27jr0rgy7gy54ajbrrbdd4j70fy"; depends=[data_table Formula]; }; + ARTool = derive2 { name="ARTool"; version="0.10.4"; sha256="1malrjv4myk9nj3dndgpzscfhky4y6lj8xbfg8h2b29g7s2k846q"; depends=[car dplyr lme4 magrittr plyr]; }; + ASMap = derive2 { name="ASMap"; version="0.4-7"; sha256="1xsgz05ck60aflnnbhwwbrnizwq92g5ickdnx39fqlj6mpxircw4"; depends=[fields gtools lattice qtl RColorBrewer]; }; ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; }; + ASSISTant = derive2 { name="ASSISTant"; version="1.2-3"; sha256="072lmvmdi5yfyfda42vs556ciwj2rnka02isnknk6czir3947nck"; depends=[mvtnorm R6]; }; ATE = derive2 { name="ATE"; version="0.2.0"; sha256="1i46ivb7q61kq11z9v1rlnwad914nsdjcz9bagqx17vjk160mc0a"; depends=[]; }; ATmet = derive2 { name="ATmet"; version="1.2"; sha256="047ibxxf5si45zw22zy8a1kpj36q0pd3bsmxwvn0dhf4h65ah0zz"; depends=[DiceDesign lhs metRology msm sensitivity]; }; AUC = derive2 { name="AUC"; version="0.3.0"; sha256="0ripcib2qz0m7rgr1kiz68nx8f6p408l1ww7j78ljqik7p3g41g7"; depends=[]; }; AUCRF = derive2 { name="AUCRF"; version="1.1"; sha256="00d7jcg2dyvf7sc9w7vxxd85m7nsbcmfqsavrv236vxfpfc9yn7i"; depends=[randomForest]; }; - AbsFilterGSEA = derive2 { name="AbsFilterGSEA"; version="1.0"; sha256="0b6867rfac7kglgigr0gc237sizvbbhg3cymjsjrr2pklkqfp1bn"; depends=[Rcpp RcppArmadillo]; }; - AcceptanceSampling = derive2 { name="AcceptanceSampling"; version="1.0-4"; sha256="0nvbh4cx0vcsqzs7j6vs6pc6yxb4i0fbjfajdnq6fvnv12m9sz41"; depends=[]; }; + AUtests = derive2 { name="AUtests"; version="0.98"; sha256="0m2nl55qfwfzlf92f43b9q75xqvrlx7qzcz6qlnjbjcr80s0qj9q"; depends=[logistf]; }; + AWR = derive2 { name="AWR"; version="1.11.89"; sha256="0mg48720ny2a28yfwqx5p4r7g7rbjbzzgbkd2m31hfyz4vnrsr4v"; depends=[rJava]; }; + AWR_KMS = derive2 { name="AWR.KMS"; version="0.1"; sha256="00aqhyqlncsv0vfcyhaazxaclwm63v5kscssash7529avdwd4gqg"; depends=[AWR jsonlite rJava]; }; + AbSim = derive2 { name="AbSim"; version="0.1"; sha256="0z3ghz0wmf2z4s2mnadiacir5frzlw77gca8fkvdh8rv5pwyy38c"; depends=[ape poweRlaw]; }; + AbsFilterGSEA = derive2 { name="AbsFilterGSEA"; version="1.5"; sha256="0071llj6xqsj495nlnvhzsqbrvls7fs3xscng537332xinmfhwdr"; depends=[DESeq limma Rcpp RcppArmadillo]; }; + AcceptanceSampling = derive2 { name="AcceptanceSampling"; version="1.0-5"; sha256="18krmmyn8pn11aqd81kbvka68lnd36mnpdh7p3pz9r4m4vjj007x"; depends=[]; }; + AcrossTic = derive2 { name="AcrossTic"; version="1.0-3"; sha256="03180h79jhjd66ibrnsfp3yyp2jlfysp7cymw46phzj2palghsc0"; depends=[lpSolve treeClust]; }; Actigraphy = derive2 { name="Actigraphy"; version="1.3.2"; sha256="0y0ccmxhdfhdmi4k6pbfvnqknkqbgvfsf2qf7z7rc4xpfgym6574"; depends=[fda SDMTools]; }; ActuDistns = derive2 { name="ActuDistns"; version="3.0"; sha256="04rff9czcgac80clpv32a1dl0jbyvfsa7wqxyywgk99w672x50i2"; depends=[actuar hypergeo reliaR]; }; - AdMit = derive2 { name="AdMit"; version="2.0.1"; sha256="0bqzq2pf5449qyr8ff5d3sq0lbsph29ppv6zzf1rbjz06sc5d6ff"; depends=[mvtnorm]; }; + AdMit = derive2 { name="AdMit"; version="2.1.3"; sha256="150zjxl56axhpgm25hzyhwwc5g77pkgi291d2v56zbjjqycfz2v8"; depends=[mvtnorm]; }; AdapEnetClass = derive2 { name="AdapEnetClass"; version="1.2"; sha256="01k3mj4g1ckbng7wkzzn9h0k9yf01cpnnkly0sjda574c5jhj0rc"; depends=[glmnet imputeYn lars quadprog]; }; AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.62"; sha256="0cxl58by9mfd6hf4hb2d5qnm0pgb0gplgg7mm0qhvckvghjpb00q"; depends=[MASS mgcv nlme SemiPar]; }; - AdaptGauss = derive2 { name="AdaptGauss"; version="1.2.0"; sha256="18kqqhzy33ivz8g9yj465jb6ih12rzgq090w2n3pgsrckflz11zf"; depends=[caTools ggplot2 mclust shiny]; }; + AdaptGauss = derive2 { name="AdaptGauss"; version="1.2.4"; sha256="0idqh1g4aypak1hm04vz2p3yklw6gbryjgm735gl46bzhlzlyyfv"; depends=[caTools ggplot2 mclust shiny]; }; AdaptiveSparsity = derive2 { name="AdaptiveSparsity"; version="1.4"; sha256="1az7isvalf3kmdiycrfl6s9k9xqk22k1mc6rh8v0jmcz402qyq8z"; depends=[Rcpp RcppArmadillo]; }; - AdequacyModel = derive2 { name="AdequacyModel"; version="1.0.8"; sha256="1bpb6lwgkh5g82h4yaf5dh2jbl6f0vz36k22538rhb3kdld6w0i3"; depends=[]; }; + AdequacyModel = derive2 { name="AdequacyModel"; version="2.0.0"; sha256="0amp6ic1wylk24sp9wpx3ci38njj7b9qjqfp89j39hkl6kc1q7sq"; depends=[]; }; + AdjBQR = derive2 { name="AdjBQR"; version="1.0"; sha256="14437pyz9v09ighwqvy1lcw0vfp2gaqzs9nzrb1gkfbb8ndzjw7k"; depends=[coda MHadaptive quantreg survival]; }; + AdvBinomApps = derive2 { name="AdvBinomApps"; version="1.0"; sha256="1cnmn6c2dyl8qfl7g5sqwbjb52psqxzrj1mbm06zak2y1j7j8f49"; depends=[GenBinomApps rootSolve]; }; AggregateR = derive2 { name="AggregateR"; version="0.0.2"; sha256="15gxzs3baa6f1rqwv7s7k6zybx0za1mpzc7db1n47jy9rbh2yxb2"; depends=[dummy]; }; Agreement = derive2 { name="Agreement"; version="0.8-1"; sha256="1g29rxr8xsr0dh2r6c6j2bqs0q6snz9wz0hrnb92cxj27ili55yq"; depends=[R2HTML]; }; + AhoCorasickTrie = derive2 { name="AhoCorasickTrie"; version="0.1.0"; sha256="0k2lcyxfsavis9g1g5293f0mw7f6jakkr11wkkjvxdlnba9c80r8"; depends=[Rcpp]; }; Ake = derive2 { name="Ake"; version="1.0"; sha256="1dj598xfdyjqvysc39a0d5gizgk367c5lkddmwmsqa8zjmvpr15a"; depends=[]; }; AlgDesign = derive2 { name="AlgDesign"; version="1.1-7.3"; sha256="0bl7mx4dnmkgs2x1fj7cqnrp7jx18mqwxyga0rzlniq12h8mc3fz"; depends=[]; }; AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; - AlignStat = derive2 { name="AlignStat"; version="1.1.3"; sha256="0zaykr7izpms59w6yhxzbjxrcvlq5028vnjqp2l7vy0767ivljci"; depends=[ggplot2 Rcpp reshape2 seqinr]; }; + AlignStat = derive2 { name="AlignStat"; version="1.3.1"; sha256="1x9nlf3z6rpfca3k3cqm673sid418mnl44df9v93nyj5dpd70ylc"; depends=[ggplot2 Rcpp reshape2 seqinr]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="1.3.1"; sha256="1k2iwns1wk5n02cii6p9prgdb6asys3vwiq5dq2i26fk2xr6j4gq"; depends=[]; }; Amelia = derive2 { name="Amelia"; version="1.7.4"; sha256="0w6532s5xr7pw47zqhhymql7i68c4lralvw1gc26l9d4c7ib00fd"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; + AmmoniaConcentration = derive2 { name="AmmoniaConcentration"; version="0.1"; sha256="05pnwfji9l9az4jvni6jy7cayzg5pbspz82a63kmj6rgibn4ywvn"; depends=[]; }; + AmostraBrasil = derive2 { name="AmostraBrasil"; version="1.2"; sha256="06y555gl9g89gygrv1rhg8j1bhb38m09mvvw67wvwhdl56j0fqbd"; depends=[foreign RCurl rgdal RJSONIO sp stringr]; }; AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1"; sha256="1vqpahavsksphxjyhd94dghg9ddskbfbs5vl5qcwl3jkjfvl7lwy"; depends=[ggplot2 xtable]; }; + AmyloGram = derive2 { name="AmyloGram"; version="1.0"; sha256="0qifcx8i29il1lih6smd38cbxqf6rnkx1nncb1yplhyjmi6vdng3"; depends=[biogram ranger seqinr shiny]; }; AnDE = derive2 { name="AnDE"; version="1.0"; sha256="1yil8ab50wvlqmdla9kmfba8vfgy5r694r6igb58s6vnmld78yf2"; depends=[discretization foreign functional stringr]; }; AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-16"; sha256="1mbjb682ns5230jd3vcvd6x4gnn9hpbmjd7r8120y4sp2g733b0f"; depends=[fastICA R_matlab]; }; - AnalyzeTS = derive2 { name="AnalyzeTS"; version="1.7"; sha256="0ssh8y854s8v833n8fl93nz8arkbj2ac6ihk65ahm7b89phcpd0z"; depends=[MASS TSA tseries TTR]; }; - AncestryMapper = derive2 { name="AncestryMapper"; version="1.2"; sha256="0d47vkf59ysa58wnlqkshsvdzhcppb9xc1agwkxv37jv1asllb67"; depends=[]; }; + AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; }; + AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="0.2.1"; sha256="100mbmdllk6c32j75jviz2k9kmwca3jvrqb95a555alfcpkfim8c"; depends=[]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; + AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; - AnthropMMD = derive2 { name="AnthropMMD"; version="0.9.9"; sha256="10wn0fkcli5yz3fhngsz8sg1mfllqkvjrpjggd9qynay2zrpiw1n"; depends=[tcltk2]; }; + AnthropMMD = derive2 { name="AnthropMMD"; version="1.0.1"; sha256="1zb5qxmnbp2ha7hsnb4cvlc6n83gimwsq2g5pwkg7yqi5xgcp1ff"; depends=[tcltk2]; }; Anthropometry = derive2 { name="Anthropometry"; version="1.7"; sha256="09bmd7gvkxm2jvcjzz0dqj5frr07fzb3r4qzih404zynrg859r9s"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; - ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.1.5"; sha256="1xnx6syn365s4w4pks7xq6rng7hk30xln8hvszxwhwfnkzr8qqn2"; depends=[doParallel foreach]; }; + ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.0"; sha256="04p1h2iahy6x65rdlrzcp18126dikrl2mapvrmh6jlwsg19b9sjc"; depends=[doParallel foreach stringr]; }; AppliedPredictiveModeling = derive2 { name="AppliedPredictiveModeling"; version="1.1-6"; sha256="004d2k3mhl45inb7kx1ph8xc8h9bgm7f7l3prmvqrl5792400cn4"; depends=[CORElearn MASS plyr reshape2]; }; - AquaEnv = derive2 { name="AquaEnv"; version="1.0-3"; sha256="1hkygw09w70im9f6l6q5yxk86mdl5pkczqfqrwc4wl1yhz7z1gjb"; depends=[deSolve minpack_lm]; }; + AquaEnv = derive2 { name="AquaEnv"; version="1.0-4"; sha256="07yx7mbslqgqg7ky67n3xfhskaj7s3w5mvl7xkih48xbsdlmxi4l"; depends=[minpack_lm]; }; ArArRedux = derive2 { name="ArArRedux"; version="0.2"; sha256="0ql9yx46sgqkc3jd7yaw3vwg8rnykbsvpcahrgc66753kcxih04q"; depends=[]; }; ArDec = derive2 { name="ArDec"; version="2.0"; sha256="14niggcq7xlvpdhxhy8j870gb11cpk4rwn9gwsfmcfvh49g58i80"; depends=[]; }; + ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.0"; sha256="0q0j08ih9isd91wkm39x887fjb01481g9d7i5086zs5jyahlfdkw"; depends=[coda hdrcde shiny shinythemes]; }; ArfimaMLM = derive2 { name="ArfimaMLM"; version="1.3"; sha256="0s5igf703zzvagsbdxf5yv4gn0vdq51b7fvbc8xkgvlmv91yy372"; depends=[fracdiff fractal lme4]; }; - ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.0"; sha256="0cq4yzayj3wc45pna59v55xfa6x98q5s62kxwmqs6q76d50z7mzp"; depends=[]; }; + ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; AsioHeaders = derive2 { name="AsioHeaders"; version="1.11.0-1"; sha256="1g226im9aakqdv5gynsl568w0mxcbfrny9lqid7pl984pq8xr8ks"; depends=[]; }; + AssayCorrector = derive2 { name="AssayCorrector"; version="1.1.3"; sha256="172zvyjim1w69d8v2ah8l56yj05vwypi77gkcz80xfyfmgcksgdk"; depends=[lattice latticeExtra RColorBrewer]; }; AssetPricing = derive2 { name="AssetPricing"; version="1.0-0"; sha256="12v8hmmknkp472x406zgzwjp7x8sc90byc3s3dvmwd5qhryxkkix"; depends=[deSolve polynom]; }; AssocTests = derive2 { name="AssocTests"; version="0.0-3"; sha256="0vin9jkyvmgwk3kjf32qd8q9cj8ibmvdggbh8ny6f413ldyd77qc"; depends=[cluster combinat fExtremes mvtnorm]; }; AssotesteR = derive2 { name="AssotesteR"; version="0.1-10"; sha256="0aysilg79vprcyjirqz6c5s1ry1ia92xik3l38qrw1gf3vfli9cw"; depends=[mvtnorm]; }; AsynchLong = derive2 { name="AsynchLong"; version="2.0"; sha256="1wjby75rpypzyrxnv2lgl7h2fsvyni3bpiwclp0x7cl4sxic1x5c"; depends=[]; }; AtelieR = derive2 { name="AtelieR"; version="0.24"; sha256="0yialpmbsbx70gvps4r58xg9wvqcril8j8yd61lkkmz4b3195zai"; depends=[cairoDevice gWidgetsRGtk2 partitions proto]; }; AtmRay = derive2 { name="AtmRay"; version="1.31"; sha256="162078jd032i72sgaar9hqcnn1lh60ajcqpsz4l5ysxfkghcxlh8"; depends=[]; }; + AutoDeskR = derive2 { name="AutoDeskR"; version="0.1.2"; sha256="16yzlrksi0fpdj1j845wbqznv1313a6npxa6a8jl5nac4sbqck27"; depends=[httr jsonlite shiny]; }; AutoModel = derive2 { name="AutoModel"; version="0.4.9"; sha256="07wpdf5b1z6lk69nqybzx333zc57wbnga6dp0vkf1d50hxmpd9yc"; depends=[aod BaylorEdPsych broom car dplyr gtools lmtest MASS ROCR rowr]; }; AutoSEARCH = derive2 { name="AutoSEARCH"; version="1.5"; sha256="1s2ldhxijd8n9ba78faik6gn4f07pdzksy0030pqyafxlr3v1qdj"; depends=[lgarch zoo]; }; AutoregressionMDE = derive2 { name="AutoregressionMDE"; version="1.0"; sha256="1dmg0q4sp2d2anzhw2my8xjhpyjsx0kf7r202q5bkw8yr57jnhvr"; depends=[]; }; - AzureML = derive2 { name="AzureML"; version="0.2.10"; sha256="0a096pzpp1ij1lj0cj5gh6f3kskgjwhigd4bclkdhvqk07dxcqnv"; depends=[base64enc codetools curl foreign jsonlite miniCRAN uuid]; }; + AzureML = derive2 { name="AzureML"; version="0.2.13"; sha256="03b2s76dbzvpy32vj5kb030k1x64lll4bfv0ci92rii9l35653gc"; depends=[base64enc codetools curl foreign jsonlite miniCRAN uuid]; }; B2Z = derive2 { name="B2Z"; version="1.4"; sha256="0w7394vs883vb32gs6yhrc1kh5406rs851yb2gs8hqzxad1alvpn"; depends=[coda mvtnorm numDeriv]; }; BACA = derive2 { name="BACA"; version="1.3"; sha256="1vbip7wbzix1s2izbm4058wmwar7w5rv3q8bmj9pm7hcapfi19k0"; depends=[ggplot2 RDAVIDWebService rJava]; }; BACCO = derive2 { name="BACCO"; version="2.0-9"; sha256="0i1dnk0g3miyv3b60rzgjjm60180wxzv6v2q477r71q74b0v0r1y"; depends=[approximator calibrator emulator]; }; + BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; BAEssd = derive2 { name="BAEssd"; version="1.0.1"; sha256="04wkhcj4wm93hvmfnnzryswaylnxz5qsgnqky9lsx4jqhvg340l6"; depends=[mvtnorm]; }; - BAMMtools = derive2 { name="BAMMtools"; version="2.1.1"; sha256="1r64n6ym5wjxc4p6pq92lwj7z6nlv33c5ikbimp0c9my7n9dlyby"; depends=[ape]; }; - BANFF = derive2 { name="BANFF"; version="1.0"; sha256="0j6rv7p34i9bgl8iig4wg2qg495xskw8j1i3wwvzynz97xn2iyzf"; depends=[coda doParallel DPpackage foreach igraph mclust network pscl tmvtnorm]; }; - BANOVA = derive2 { name="BANOVA"; version="0.2"; sha256="1zgn9wxh4c89rris58hhj5fh37mmy8wjvligr02id7a1pcw177m3"; depends=[coda rjags runjags]; }; - BAS = derive2 { name="BAS"; version="1.0.9"; sha256="0jhf9ijarvib924hfy1j39mifaraazzv8lp6fqvrj27fxndmhxw7"; depends=[]; }; + BAMBI = derive2 { name="BAMBI"; version="1.1.0"; sha256="1578iifmjzlhxvgih8l5va07w6zk8d6li7j1w91033lfpzivahr0"; depends=[label_switching Rcpp RcppArmadillo]; }; + BAMMtools = derive2 { name="BAMMtools"; version="2.1.6"; sha256="01mb40w3g0xy93pl9064ky8kd46sa7qlz6by1r6kchcfhajx8plv"; depends=[ape gplots Rcpp]; }; + BANFF = derive2 { name="BANFF"; version="1.1"; sha256="1jzmrw170577xl6zliyf53862gk1gkpx4dhb6jyqxmipkn56b8la"; depends=[coda doParallel DPpackage foreach igraph mclust network pscl tmvtnorm]; }; + BANOVA = derive2 { name="BANOVA"; version="0.8"; sha256="0kjmhb1y3vkm8yw4z5fqmr1ripblk82svg2ik15ml2xnriwgdpwp"; depends=[coda rjags runjags]; }; + BAS = derive2 { name="BAS"; version="1.4.3"; sha256="1ix277flarxp5xk3w3r715i1y30bx2d49c73s1xhjrwjlpj6jj74"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; - BAT = derive2 { name="BAT"; version="1.4.0"; sha256="18152jd8k3pngnjgzjmbvsk5qhxsqsi3k1yfdrcb61n4hvqxgns1"; depends=[nls2 spatstat vegan]; }; + BASS = derive2 { name="BASS"; version="0.2.0"; sha256="1sgz4clzbrbhj845nf1bbv16ww2j72vfvmb7n8hhnpv84r5q5dm9"; depends=[]; }; + BAT = derive2 { name="BAT"; version="1.5.5"; sha256="1kgrc2crj834qlnac2kb18pp3dfpryhsrh4l84jpm561kk3wzcqb"; depends=[nls2 raster spatstat vegan]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; BB = derive2 { name="BB"; version="2014.10-1"; sha256="1lig3vxhyxy8cnic5bczms8pajmdvwr2ijad1rkdndpglving7x0"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; BBRecapture = derive2 { name="BBRecapture"; version="0.1"; sha256="05xzp5zjmkh0cyl47qfsz0l8drg8mimssybhycc4q69aif9scqxb"; depends=[HI lme4 locfit secr]; }; - BBmisc = derive2 { name="BBmisc"; version="1.9"; sha256="01ihbx6cfgqvz87kpy7yb9c7jlizdym3f0n16967x2imq73dazsb"; depends=[checkmate]; }; + BBmisc = derive2 { name="BBmisc"; version="1.10"; sha256="0cw2mhw7qhdrx91zzd5iwyh7ch9fy4wxga8j63731q6sxr1airjl"; depends=[checkmate]; }; BCA = derive2 { name="BCA"; version="0.9-3"; sha256="0ksd6b0ykydgdn33x29bwwqkrp23cvdj3imps0l6qs1p4465j5nf"; depends=[car clv flexclust Rcmdr RcmdrMisc rpart]; }; BCBCSF = derive2 { name="BCBCSF"; version="1.0-1"; sha256="0hvhnra68i0x78n57nlbxmz0qwl2flng9w47089jw6f9hzkq9r7n"; depends=[abind]; }; + BCC1997 = derive2 { name="BCC1997"; version="0.1.1"; sha256="1lqbivjkc7858jn54av1v9bzp0as43klgndbzkr59dc3l128xp12"; depends=[]; }; BCDating = derive2 { name="BCDating"; version="0.9.7"; sha256="0z3a95sc481p0n33mhg7qlsf1jynbm1vbfds0n03bsjrwvqkzpb2"; depends=[]; }; BCE = derive2 { name="BCE"; version="2.1"; sha256="0dqp08pbq7r88yhvlwgzzk9dcdln7awlliy5mfq18j5jhiy7axiz"; depends=[FME limSolve Matrix]; }; - BCEA = derive2 { name="BCEA"; version="2.2-2"; sha256="0nal906l60f6llv8dzfsa0367abdkch0gc13rb3jix3cn0iwfwlf"; depends=[MASS]; }; + BCEA = derive2 { name="BCEA"; version="2.2-5"; sha256="0jiizwnxycbz9x8fmkcw3rcjkgg5b9fawyddf8swvx23cnfm6z8z"; depends=[MASS]; }; BCEE = derive2 { name="BCEE"; version="1.1"; sha256="0pssqmjj13wjbkq8ls5r9zr08by24q0k9g4f1aysgxds2a4dawd1"; depends=[BMA]; }; BCEs0 = derive2 { name="BCEs0"; version="1.1-1"; sha256="1ipg8xliqnpfa4ga9r0gqf5sfa9gass4hvrlgxazs5hb18fpsl91"; depends=[]; }; BCRA = derive2 { name="BCRA"; version="1.0"; sha256="1bbxh1kf35h31c4k565kk6grdhp5pnn8vr3nr6vnp32dp4pc05zh"; depends=[]; }; - BDWreg = derive2 { name="BDWreg"; version="1.0.0"; sha256="0fv9w19ansrfil9lx7v32p392h9mfal1znj8p47p1n22jbk208x8"; depends=[coda doParallel foreach MASS]; }; - BDgraph = derive2 { name="BDgraph"; version="2.26"; sha256="0lbn7780pn55hm46ml7sgmcv3vvlwaa54hhks3z634hnyjk8f3b8"; depends=[igraph Matrix]; }; + BCSub = derive2 { name="BCSub"; version="0.3"; sha256="0ap3mj6dm71xrx9aygnhmhkiyga0ln7xcg863da27yw2a74fdjxk"; depends=[MASS mcclust nFactors Rcpp RcppArmadillo]; }; + BCellMA = derive2 { name="BCellMA"; version="0.3.2"; sha256="10n2z8p8m7np0d3v3w7ig2hmi9lxf59fiwib27zxz5xzdkdf61af"; depends=[ggplot2 reshape2]; }; + BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; + BDgraph = derive2 { name="BDgraph"; version="2.33"; sha256="1l59dk9ml40yhl71xxv0agxhiljabv15dr9gpzfdsxjbnjgk6mqi"; depends=[igraph Matrix]; }; + BEACH = derive2 { name="BEACH"; version="1.1.2"; sha256="10533ac575mcw9mv1lf3dgjjaf1hgzv3yn7ys9qi6b2k5fynhsg0"; depends=[devtools DT haven plyr readxl rJava rtf sas7bdat SASxport shiny WriteXLS xtable]; }; BEANSP = derive2 { name="BEANSP"; version="1.0"; sha256="0xcb81pk3iidb3dz9l4hm6cwx8hrbg5qz0sfi59yx2f7nsazr4xk"; depends=[]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; - BEDMatrix = derive2 { name="BEDMatrix"; version="1.2.0"; sha256="1j80gdkir5p5wlfq7p3bnqcphm6fmxgya46ga0ifz1rxiwqhw5vf"; depends=[BH Rcpp]; }; + BEDMatrix = derive2 { name="BEDMatrix"; version="1.3.0"; sha256="0i8g9kc8vq79mbzds7s5c10kvbx3bw6c964jx33cga2z788wcv4s"; depends=[BH Rcpp]; }; BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; }; BEST = derive2 { name="BEST"; version="0.4.0"; sha256="1clch2271x9r5frgpis31b13jjgp4sdxd75s44chcislyzlinrlp"; depends=[coda jagsUI]; }; - BGLR = derive2 { name="BGLR"; version="1.0.4"; sha256="1bvk8iifvrcvnb0f1k3v9xxajljsz79ck95191p8alnda64cz0zf"; depends=[]; }; + BETS = derive2 { name="BETS"; version="0.0.98"; sha256="0snw5vw0qxllfinjzqwgkyyfavzqx5kay1xx3xqjd3w8ncj1vqs5"; depends=[colorspace dygraphs FinTS forecast foreign fpp fracdiff ggplot2 grnn gtable htmlwidgets lmtest mFilter normtest plotly quadprog Rcpp rmarkdown rootSolve rugarch scales seasonal sqldf stringi stringr testthat timeDate TSA tseries TTR urca viridis zoo]; }; + BGLR = derive2 { name="BGLR"; version="1.0.5"; sha256="14a979rnasaklkfafzpkhr6mqv0ga7fsfxq63scpnlwa2aasgn83"; depends=[]; }; BGPhazard = derive2 { name="BGPhazard"; version="1.2.3"; sha256="1yp92y5y3xh0hb1ring6jrma8g4q6210hm9572j8ji1jkafzxjw1"; depends=[survival]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; - BH = derive2 { name="BH"; version="1.60.0-1"; sha256="08gc3b0irgvpjl59irdxs8jhlbky4yp4fvs3zi4pq0wdwj43cfsk"; depends=[]; }; - BHH2 = derive2 { name="BHH2"; version="2015.06.25"; sha256="19c8qjfvg4f3zlrqvrsdmc776f81ghv8w0l3bnbpdbyz7fivc1qw"; depends=[]; }; - BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="1.8-0"; sha256="1lizj7jyh8130y8b2ls912yfr2rf2pfnsmbm6vnfqrhj2xc6b33h"; depends=[miceadds mitools Rcpp RcppArmadillo TAM]; }; - BIGDAWG = derive2 { name="BIGDAWG"; version="1.2.8"; sha256="0ahj2lwfd36lrqpaf2ywjq9i3603dydyw4c2hzx86czaanp2xcx6"; depends=[haplo_stats XML]; }; + BH = derive2 { name="BH"; version="1.62.0-1"; sha256="01vfdpfznd4ynqql33z238xr262mvy3i80lyi8l3a3p3hi0a262p"; depends=[]; }; + BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; + BIEN = derive2 { name="BIEN"; version="1.0.0"; sha256="1yzn7inxc471pnk8b1c6q3s07r8j400dhmplnk7nbbgfbagqi987"; depends=[ape DBI maptools rgdal rgeos RPostgreSQL sp]; }; + BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="1.12-0"; sha256="13bdv9wh5s5jz5hkl839hd9x13958r3p3zzkz6j0nd7z5xax47x6"; depends=[miceadds mitools Rcpp RcppArmadillo TAM]; }; + BIGDAWG = derive2 { name="BIGDAWG"; version="1.5.5"; sha256="1blqaxhx9ffa036zcz30kmkhh58l0ybmyrb2sb947f2i13h7qsk0"; depends=[haplo_stats XML]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; - BIOdry = derive2 { name="BIOdry"; version="0.3"; sha256="0dn9nbh0h1wz351xba8g7i0g2jv0v5p1rrxpq842lbfibn2wn0q5"; depends=[ecodist nlme]; }; + BIOMASS = derive2 { name="BIOMASS"; version="1.1"; sha256="1qawp10hw7xhqyg9bdwvgxbksiwhga7h6vwp8m7q30ibwfv5kamg"; depends=[httr jsonlite minpack_lm msm raster]; }; + BIOdry = derive2 { name="BIOdry"; version="0.4"; sha256="00xv6qyrmfsyp2qfb8ffii0ifxx18wj7lxzb2svdmqbg8xz8pnbv"; depends=[ecodist nlme]; }; BIPOD = derive2 { name="BIPOD"; version="0.2.1"; sha256="04r58gzk3hldbn115j9ik4bclzz5xb2i3x6b90m2w9sq7ymn3zg1"; depends=[Rcpp RcppArmadillo]; }; BKPC = derive2 { name="BKPC"; version="1.0"; sha256="1c5n2vdpsk00slqyxxq2c8d7ix8jdbyigrh23ykd4b95mynp9kdv"; depends=[kernlab]; }; BLCOP = derive2 { name="BLCOP"; version="0.3.1"; sha256="1qfkljw5b1k4b5jd08hw6dsmvgr7vg3kjyib5s13q0mkxvclasym"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; BLR = derive2 { name="BLR"; version="1.4"; sha256="0wy3c8nnzkdhwb5s1ygdid47hpdx72ryim36mnicrydy0msjivja"; depends=[SuppDists]; }; BMA = derive2 { name="BMA"; version="3.18.6"; sha256="1yx54miy5vn8rb5aynsjsfjxkblq0n1k86h1iyr14rf4q9sd3phi"; depends=[inline leaps robustbase rrcov survival]; }; BMN = derive2 { name="BMN"; version="1.02"; sha256="12gyq01cn6a9ixqgki1ihx5jrp2gw6jdj7q210rb12xlvj3p6x7w"; depends=[]; }; - BMRV = derive2 { name="BMRV"; version="1.31"; sha256="02y589figv152mx7a9jra3vhjp7sjiljvpf24fhavnh0da3irg4z"; depends=[BH]; }; + BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; BMhyd = derive2 { name="BMhyd"; version="1.2-8"; sha256="14pv5f621zq5x9i408zjm8k80hcsabkjpdf86gk3ylgw5yqcivrx"; depends=[ape corpcor geiger mvtnorm numDeriv phylobase phytools TreeSim]; }; BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; }; + BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="0.2.0"; sha256="1w8p8fkiai2xqgf0w8imv55p8s1nvsfdfmyrq2cnc5b8m1gw457k"; depends=[MASS matrixcalc mvtnorm plyr truncnorm]; }; BNPTSclust = derive2 { name="BNPTSclust"; version="1.1"; sha256="1zmxwg6zn3nqqm1sw2n4pvq47mv7ygb4lf1c6yhn3xaf1rqmf26s"; depends=[MASS mvtnorm]; }; BNPdensity = derive2 { name="BNPdensity"; version="2015.5"; sha256="0jgdc9dayc57y77bb2yjcn1pb5ahrvbrsmyjkhyl4365sn5njzl8"; depends=[]; }; - BNSP = derive2 { name="BNSP"; version="1.1.0"; sha256="1l45x3h0jqszcp7zws6y4nbq2vzyv6aa60kwqfpkjw0kdbbcpw7m"; depends=[]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; - BOIN = derive2 { name="BOIN"; version="2.1"; sha256="14xfjp1ir1mlg3wayn66rnwnjccdpnk7p0l59455v1wglbajnzb3"; depends=[Iso]; }; + BOIN = derive2 { name="BOIN"; version="2.4"; sha256="0vb3bkaq9vl1yqm3dhdpd27nhv2095n3lp90fr961jpwj1xhjh5l"; depends=[Iso]; }; + BPEC = derive2 { name="BPEC"; version="1.0"; sha256="15ys0nzy6988yw1lf4lmv2h9i164cbl41x261gdyvmg0dy62qsnc"; depends=[ape coda fields igraph maps maptools mvtnorm phytools R2G2 sp]; }; BRugs = derive2 { name="BRugs"; version="0.8-6"; sha256="0nvp3lwliq72qibvz4bg6c7ixxmhgwl87hyl2qvkgiavix3nkxk7"; depends=[coda]; }; BSDA = derive2 { name="BSDA"; version="1.01"; sha256="06mgmwwh56bj27wdya8ln9mr3v5gb6fcca7v9s256k64i19z12yi"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; - BSGW = derive2 { name="BSGW"; version="0.9.1"; sha256="1zp8352mgqpmyn63b5xfmq67rsf3cdy7yy5k1qihdlkw9bi5r3vc"; depends=[doParallel foreach MfUSampler survival]; }; - BSSasymp = derive2 { name="BSSasymp"; version="1.1-2"; sha256="1c1s574ss7vm00hykv6ahlsw6yzsxdj96cfcj4f1khrmnakiv7z3"; depends=[fICA JADE]; }; + BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; }; + BSSasymp = derive2 { name="BSSasymp"; version="1.2-0"; sha256="1xs6gfvsla7h1sldckjfpw3qx7fhxiqzv849g3k6w1309r7pv75r"; depends=[fICA JADE]; }; BSagri = derive2 { name="BSagri"; version="0.1-8"; sha256="148pr4lkgdi4bwc9lavgj356nh240iazz28xklq14rw4gzhmz2k4"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; BSquare = derive2 { name="BSquare"; version="1.1"; sha256="1s16307m5gj60nv4m652iisyqi3jw5pmnvar6f52rw1sypfp5n49"; depends=[quadprog quantreg VGAM]; }; - BTLLasso = derive2 { name="BTLLasso"; version="0.1-2"; sha256="02zd0fp7km4l2ks50z37gqcbpq6fsvkiwqnccndszrwqhi41x7y5"; depends=[Matrix Rcpp RcppArmadillo stringr]; }; + BTLLasso = derive2 { name="BTLLasso"; version="0.1-5"; sha256="1kvb6hvg3v81p9bkc8z3dqhmmfj1rxzzpx9n3lknmfrynq1a6748"; depends=[Matrix Rcpp RcppArmadillo stringr]; }; + BTR = derive2 { name="BTR"; version="1.2.4"; sha256="0vf71a36id6zgx0phb0kyry7y9xcdhnincxh3fryzhdigxkahg4h"; depends=[diptest doParallel entropy foreach igraph infotheo poweRlaw Rcpp]; }; BTSPAS = derive2 { name="BTSPAS"; version="2014.0901"; sha256="0ankkhm38rvq06g0jnbvjbja4jv8lg21dsc0rxsy174b1i6vjhwi"; depends=[actuar coda ggplot2 plyr R2OpenBUGS rjags]; }; BTYD = derive2 { name="BTYD"; version="2.4"; sha256="13szcsgsrd7mwc4f47xrfrmsm2sg5sf7pfm21ly4cbvqcz8m0147"; depends=[hypergeo Matrix]; }; + BTYDplus = derive2 { name="BTYDplus"; version="1.0.1"; sha256="0x8as4zskpbsvhh8gnvzgp833dkv01cs5fqfva9qri296343kppv"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; + BUCSS = derive2 { name="BUCSS"; version="0.0.1"; sha256="1in3y2z9maqd10fma67v8skpngsifr5cm9wsnfii0iflibs4ljbq"; depends=[]; }; BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; }; + BWStest = derive2 { name="BWStest"; version="0.2.0"; sha256="1fv4jv2fr740a1f8p6wild6szb03j8vm59y12nl4cl4aa6wn40rz"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; - BaM = derive2 { name="BaM"; version="0.99"; sha256="1q04va2s876ydlmaalx63r520pfx1qzpjg6hbnl9pvn86b5grnf4"; depends=[bayesm coda foreign MASS mice nnet survival]; }; + BaM = derive2 { name="BaM"; version="1.0.1"; sha256="0y8m6mhghlrp379swj9cfrzqcdr3a7y29mx4d6zld4is00wdw16b"; depends=[coda dlm MASS mice nnet]; }; + BaPreStoPro = derive2 { name="BaPreStoPro"; version="0.1"; sha256="0zyyyrr5h8dhjsmgaii8jmb8ignvixpc9nzbfishw9yymjswvm57"; depends=[]; }; BaSTA = derive2 { name="BaSTA"; version="1.9.4"; sha256="1j092gsdip7rpw0g74ha0kjsrqpp5swi7wd4sxlmx6zarcqnxlal"; depends=[snowfall]; }; - BacArena = derive2 { name="BacArena"; version="1.0.1"; sha256="1hr454nyrd3cn901ppj5giimn7nyakv9fbc9lz4fvb7srw915lg2"; depends=[deSolve igraph Matrix Rcpp RcppArmadillo RcppEigen ReacTran sybil]; }; + BaTFLED3D = derive2 { name="BaTFLED3D"; version="0.1.7"; sha256="06bvx2f094r4rkzpv517h81pjg211k7ajfcq0k3lxdar7ck1388a"; depends=[foreach iterators R6 RColorBrewer rTensor]; }; + BacArena = derive2 { name="BacArena"; version="1.5.1"; sha256="03rk0b1dbyzhwdfj3q4a91hwhzng76fshnbnbyfblmnnnsfk4v9g"; depends=[deSolve ggplot2 glpkAPI igraph Matrix Rcpp RcppArmadillo RcppEigen ReacTran reshape2 sybil]; }; Bagidis = derive2 { name="Bagidis"; version="1.0"; sha256="1prdbkc0qgzkkrkhp43pjyg35q9ivngk8wa4a7khlnfsj21jaraf"; depends=[abind]; }; - BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.1"; sha256="10km8xcaz1vrabdgbanajza0667w5l8ly7n7lgil2ip9cgfxyw2p"; depends=[Rcpp]; }; - Barnard = derive2 { name="Barnard"; version="1.6"; sha256="1wk93yj4pl3mybyl2lvgbpq0chpm4akx3rqb29dk34fkfiwmvlhq"; depends=[]; }; + BalanceCheck = derive2 { name="BalanceCheck"; version="0.1"; sha256="09mkssic173glgcn592cb6zmz80kndggqc4hc800f91xnfql0332"; depends=[ade4 mvtnorm]; }; + BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.2"; sha256="0a4mb5lwjcy5d3h0ypsqmqniqx3dm64mssj65apgl48wqbm6zvv0"; depends=[Rcpp]; }; + BarcodingR = derive2 { name="BarcodingR"; version="1.0-2"; sha256="1mn5rdax8v1s2z3apk9z0kzy4hw19m8ql6j91l6wd29g2n2bjqxx"; depends=[ape class nnet sp]; }; + Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; + Barycenter = derive2 { name="Barycenter"; version="1.0"; sha256="0dqa3fzrwcaqgkj883v9cn5v0zl3rl32zlqzx9lbqzbrlchxgc3k"; depends=[Rcpp RcppArmadillo]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.1"; sha256="0fg7p0q6avc0kcwcd3z4q3akrr2mkrx2yf9zcd6hhz22l3x4aphz"; depends=[BatchJobs BBmisc checkmate DBI plyr RSQLite]; }; + BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="1.1"; sha256="1njivlrn3wyr5frwqd9d152y0xlvh6d38p9i1p87bnpjpzcc7iyv"; depends=[curl quantmod rvest stringr]; }; BatchJobs = derive2 { name="BatchJobs"; version="1.6"; sha256="1kb99024jih5bycc226bl4jyvbbl1sg72q3m2wnlshl7s8p6vva0"; depends=[BBmisc brew checkmate DBI digest fail RSQLite sendmailR stringr]; }; BayClone2 = derive2 { name="BayClone2"; version="1.1"; sha256="1wprdj22zh8fwqawcv4m2n2y7sqwh2f6m9b0cq0rp4ll774yz30i"; depends=[combinat]; }; BayHap = derive2 { name="BayHap"; version="1.0.1"; sha256="0xqnl2cbf0pyjlpywyy0j4mwknfn8msz4s719dsri3r7hvn9m6kd"; depends=[boa]; }; BayHaz = derive2 { name="BayHaz"; version="0.1-3"; sha256="08ilghlkgyma5758yw7mdgqycqcillqmx73knzzdlg2kzc77dvg6"; depends=[]; }; BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; }; - BayesBD = derive2 { name="BayesBD"; version="0.1"; sha256="0m4y74ijbamqq2cxq7i7i5rkcbx1glbhwm01c1jxkff7m2f1892n"; depends=[plotrix]; }; + BayesBD = derive2 { name="BayesBD"; version="1.1"; sha256="0wkkk69841vfbwc10s0kvcvx87pnafgx4lr4d2nvqq3v4sw1d2v2"; depends=[Rcpp RcppArmadillo shiny]; }; + BayesBinMix = derive2 { name="BayesBinMix"; version="1.4"; sha256="09jb8g273xf72wmrgqmajypszl1dyqab9wldb08aqlqf3d3rp1lw"; depends=[coda doParallel foreach label_switching]; }; BayesBridge = derive2 { name="BayesBridge"; version="0.6"; sha256="1j03m465pwq0lhbrfvddjglrzs6px7bc89yvfzj776amm7myqd0l"; depends=[]; }; BayesCR = derive2 { name="BayesCR"; version="2.0"; sha256="0cafind5vz81ryw1c7324hyfc6922fsxmjnvddb4mrhis54id2r4"; depends=[mnormt mvtnorm Rlab rootSolve truncdist]; }; + BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; BayesDA = derive2 { name="BayesDA"; version="2012.04-1"; sha256="0fp27cmhw8dsxr4mc1flm6qh907476kph8ch2889g9p31xm1psjc"; depends=[]; }; + BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-2"; sha256="17zfs8bmzp59zaxzcrzis2sxdnqxrv9h1kpb22112mp9l1alvwl4"; depends=[coda gtools Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; + BayesH = derive2 { name="BayesH"; version="1.0"; sha256="0mjd1i3rkhyq3qcalq0ing0ap0igbhyvczaihl4pcfidgs70bci3"; depends=[]; }; BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; }; - BayesLogit = derive2 { name="BayesLogit"; version="0.5.1"; sha256="0nr215wzhqlfi32617mmqb6i3w5x1kh5fiy68k0xzdqjsyjr65m0"; depends=[]; }; + BayesLogit = derive2 { name="BayesLogit"; version="0.6"; sha256="0jygw6wkmb6887qglzhl525v56kb0y8ig0w56dywbd8dmsv967z7"; depends=[]; }; BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; }; - BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9"; sha256="0hqkqpzk21d2zh7pyn042w1s51wyszkmam0rwzgy0i9i51zjxwvz"; depends=[survival]; }; + BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; + BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; + BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; + BayesS5 = derive2 { name="BayesS5"; version="1.22"; sha256="18bs9kgpk7qg1hqdk7av0ygmrkn19nmrdprxf5syy0iqj5l3y13q"; depends=[abind Matrix snowfall]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-1"; sha256="09s7f472by689b2b0gahnkhyjriizpsx6r5qa95nf3f4bfqi2cpf"; depends=[coda Formula lattice]; }; BayesSingleSub = derive2 { name="BayesSingleSub"; version="0.6.2"; sha256="0hgmyhg4mpxx7k91hbfa9h3533mqyn9rz4kl9kb30cc9g7g0m045"; depends=[coda MCMCpack mvtnorm]; }; + BayesSpec = derive2 { name="BayesSpec"; version="0.5.3"; sha256="17gchdijcjhbr2y4glbq9szjh4qmgivzh6p4fllh589da18nzjcr"; depends=[mvtnorm pscl trust]; }; BayesSummaryStatLM = derive2 { name="BayesSummaryStatLM"; version="1.0-1"; sha256="05mlgyi4fglvjkpqyw3vcjpipqllx37svcb20c1mrsa46m6fm4s7"; depends=[ff mvnfast]; }; - BayesTree = derive2 { name="BayesTree"; version="0.3-1.3"; sha256="1wa72mzy1mxw64r1hzadimz0ngi6ng7sbgak7g55rbgj8bmj02yk"; depends=[nnet]; }; + BayesTree = derive2 { name="BayesTree"; version="0.3-1.4"; sha256="0saca1ln582szqzc2c78z24b1lszzhc9hvsin73kb7r2dlg5ciii"; depends=[nnet]; }; + BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; }; BayesValidate = derive2 { name="BayesValidate"; version="0.0"; sha256="1gli65avpkb90asx92l1yjbwaxcsyb920idyjwgd2sl2b3l657ly"; depends=[]; }; - BayesVarSel = derive2 { name="BayesVarSel"; version="1.6.2"; sha256="1sc26rwa1z1wf8qs21js8xbna51vknd4jcdhvikn8s0i5413l85y"; depends=[MASS]; }; + BayesVarSel = derive2 { name="BayesVarSel"; version="1.7.0"; sha256="10w9l8jz7j72npl0z2smngrsmb4ga88gn37ps1xn3fyql999iz7d"; depends=[MASS mvtnorm]; }; BayesX = derive2 { name="BayesX"; version="0.2-9"; sha256="0p170m8zkaspiah1fdyql9lj9yqg6sl525blzq7wwgx5wx4rvncs"; depends=[coda colorspace maptools shapefiles sp]; }; BayesXsrc = derive2 { name="BayesXsrc"; version="2.1-2"; sha256="114804f6maak5dmwzw4cbigjcdw7c6sgx48af35yrvkspi1gsz3b"; depends=[]; }; BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; + BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.1"; sha256="1vclgdqqldkwhiilv44ihflbadllna5hvggbjbpz0r3365alnmq6"; depends=[bnlearn d3heatmap lattice networkD3 rhandsontable shiny shinydashboard]; }; + BayesianTools = derive2 { name="BayesianTools"; version="0.1.0"; sha256="195y5jwbdmi9m4vbxmcc3yw8gx2ay2vgwxsa29yb3sy542wiy0ii"; depends=[coda ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp vioplot]; }; Bayesianbetareg = derive2 { name="Bayesianbetareg"; version="1.2"; sha256="0imsz2761ngbnap0vnxks9527la51m5g8gkkn1vrgwis43i6qcgs"; depends=[betareg mvtnorm]; }; Bayesthresh = derive2 { name="Bayesthresh"; version="2.0.1"; sha256="0w26h1ragqcg1i4h7c2y6vd8fig2jb2zrnvvchgg5z2hg9qdplsf"; depends=[coda lme4 MASS matrixcalc mvtnorm VGAM]; }; BaylorEdPsych = derive2 { name="BaylorEdPsych"; version="0.5"; sha256="1kq6nvzdqwawygp7k62lw5hyccsj81jg82hq60yidgxnmmnnf7y2"; depends=[]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; - Bchron = derive2 { name="Bchron"; version="4.1.2"; sha256="0pljizj3689mxvsj62mhcy1zvcx7s41vsr5fawz9hij91nq1b8yi"; depends=[coda ellipse hdrcde inline MASS mclust]; }; - Bclim = derive2 { name="Bclim"; version="2.3.1"; sha256="160c9v83bpik73yjj45lr8sdgl8v4ymlkqw424ncc3lficyhvfjg"; depends=[hdrcde MASS mclust statmod]; }; + Bchron = derive2 { name="Bchron"; version="4.2.6"; sha256="0i77a72cq6ddpfgs2p0f3bskb03428jxxyq8chjyirsws1amzp92"; depends=[coda ellipse inline MASS mclust]; }; + Bclim = derive2 { name="Bclim"; version="3.1.2"; sha256="0dd4fx3rlljj3zb1m8q1bam1bswg497l3y8k0h0mkvjn94b4jbag"; depends=[ggplot2 MASS mclust statmod]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.26"; sha256="00w7a16lhra6rjylyj26q67mvgbc3wa27a2wmiwjz5yh7wdnh193"; depends=[lpSolveAPI ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; Bergm = derive2 { name="Bergm"; version="3.0.1"; sha256="1ngxqpagf8snnwdm82bg8yxbf1zpzd99g32fhw9l4gjx77kpkhl2"; depends=[coda ergm mvtnorm network]; }; - BerlinData = derive2 { name="BerlinData"; version="1.0.1"; sha256="1shhx4pisi139sc0siawa7gp9psfgxm58qijg5m65nihv7spki75"; depends=[rjson stringr XML]; }; Bessel = derive2 { name="Bessel"; version="0.5-5"; sha256="1apcpwqgnbsn544x2mfjkp4136xn33pijazmbzas7lr14syl5a6b"; depends=[Rmpfr]; }; + BetaBit = derive2 { name="BetaBit"; version="1.3"; sha256="1x9mfnijgi8726p82d52g2zgmliwsc97v2g96mz9ccz2vqqnwq4w"; depends=[digest]; }; + BeviMed = derive2 { name="BeviMed"; version="3.0"; sha256="0mm1n9lmx03cmwdm3nwj7x42sa24vnahhxizykfd1npcfm9zz5ij"; depends=[Rcpp]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; + BiBitR = derive2 { name="BiBitR"; version="0.2.2"; sha256="13v8kwf8rnagf978v26a5qn19x44lzdz61n80rw8vxi2ydxbdbr9"; depends=[biclust foreign]; }; BiDimRegression = derive2 { name="BiDimRegression"; version="1.0.6"; sha256="1kgrk4xanvxqdq619ha08wwplmsn2xqygx4dziagx48iqfpp1lxj"; depends=[nlme]; }; - BiSEp = derive2 { name="BiSEp"; version="2.0.1"; sha256="15sn9kxs0mb98kclfpif90c808a1365gdj2j332sxi07f64pb87q"; depends=[AnnotationDbi GOSemSim mclust]; }; - BiTrinA = derive2 { name="BiTrinA"; version="1.1"; sha256="1isq7dffzchllynj2pifjaw2vjkhclqjk2xh6kbnh9cxca16s0kq"; depends=[diptest]; }; + BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; + BiTrinA = derive2 { name="BiTrinA"; version="1.2"; sha256="0q2wqxj2ipmppilhvq80cnvhnhcp26h422i8ghx26nrkswhx378s"; depends=[diptest]; }; BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; }; + BigQuic = derive2 { name="BigQuic"; version="1.1-7"; sha256="1bhi9dilrprgjvqyc2hb4a0y8rm9la0m5lgry9mf184p56z1syzb"; depends=[Matrix Rcpp scalreg]; }; + BigSEM = derive2 { name="BigSEM"; version="0.2"; sha256="091fdibcxd8a8kf9k4pvc1sah830wh179f28gag9g816h4qclnx9"; depends=[MASS parcor]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; - BinNonNor = derive2 { name="BinNonNor"; version="1.2"; sha256="15bzpi2q2428661v8z9izp942ihffgq8dgh4fsnzllvdrpqcyc41"; depends=[BB corpcor Matrix mvtnorm]; }; - BinNor = derive2 { name="BinNor"; version="2.0"; sha256="0c1qy93ccgzg8g25wm1j4ninsa0ck4y3jjh25za92w070cqhkd8m"; depends=[corpcor Matrix mvtnorm psych]; }; - BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.0"; sha256="1x231xxdiyp6nwj2dx9w1shi5w6mdyzg43g5zc4r2bpvzccgj0l0"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; - Binarize = derive2 { name="Binarize"; version="1.1"; sha256="07r41n5123pk6nwdwajgw6m3w38kprf4ksinx4rjldd8h1yd6rik"; depends=[diptest]; }; + BigVAR = derive2 { name="BigVAR"; version="1.0.1"; sha256="1hsx6fl3zjxfhjr18h2gbhgh0zzh9mdmr3zh0jnbfk8wv3y1nhxv"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; + BinNonNor = derive2 { name="BinNonNor"; version="1.3"; sha256="0lxhfys066wz8svr9mjb28rd85lhjicqw4py4j96w9zgi974ha51"; depends=[BB corpcor Matrix mvtnorm]; }; + BinNor = derive2 { name="BinNor"; version="2.1"; sha256="14b90y40wzqwaf1v1l92s17j0kggbcsg5c90l1r7wi3j4xcl20pc"; depends=[corpcor Matrix mvtnorm psych]; }; + BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.2"; sha256="196mn1ldbj4ngrrvr3d8aqwdjcprpjh0z66655vbzqb9m3nj893l"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; + Binarize = derive2 { name="Binarize"; version="1.2"; sha256="014iagr76y3v7ljn6zlbg1hxwbwdi889bqxa7hwmqrcybnla22ja"; depends=[diptest]; }; BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; }; - BinaryEPPM = derive2 { name="BinaryEPPM"; version="1.0"; sha256="088yg07966g09gv9hznhwfdka4yk0c9j0viy9x4ldmhxl9w9scv5"; depends=[expm Formula numDeriv]; }; - BioFTF = derive2 { name="BioFTF"; version="1.0-0"; sha256="0k5n82g633gdnyp7rmmm0gvmkhfjgm3frw4shhy0v1jlcvlp9v6n"; depends=[]; }; + BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.0"; sha256="08w5zcyrfz55x86nwpb4k0w0lpk1ncirjp30p46421w0xz8swk10"; depends=[expm Formula lmtest numDeriv]; }; + BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; }; BioGeoBEARS = derive2 { name="BioGeoBEARS"; version="0.2.1"; sha256="0wyddc5ma47ljpqipfkwsgddp12m9iy4kqwwgklyhf0rqia56b1h"; depends=[ape cladoRcpp FD gdata optimx phylobase plotrix rexpokit xtable]; }; BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; }; + BioPET = derive2 { name="BioPET"; version="0.2.1"; sha256="0pwkgffm8hlgvpk3dfzskl50kp9b4rnxc8aj119kwrmlfazhhl50"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioPhysConnectoR = derive2 { name="BioPhysConnectoR"; version="1.6-10"; sha256="1cc22knlvbvwsrz2a7syk2ampm1ljc44ykv5wf0szhnh75pxg13l"; depends=[matrixcalc snow]; }; BioStatR = derive2 { name="BioStatR"; version="2.0.0"; sha256="1k3z337lj8r06xgrqgi5h67hhkz2s5hggj6dhcciq26i1nzafsw6"; depends=[ggplot2]; }; Biocomb = derive2 { name="Biocomb"; version="0.2"; sha256="1igav8l1s4byannhkdm5fznqrga6cv9ws1lxyam221h8cl3qz8aw"; depends=[arules class discretization e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; }; - BiodiversityR = derive2 { name="BiodiversityR"; version="2.6-1"; sha256="181pz4zjx0kvj5m688g8ffaywa60mssgmkl0w60r8195sj80c3y5"; depends=[Rcmdr vegan]; }; + BiodiversityR = derive2 { name="BiodiversityR"; version="2.8-0"; sha256="0jfnwa7abwrharlwv9v9fdb5dq3mb74wjsc3ak9lp00s8nlj7jl0"; depends=[Rcmdr vegan]; }; + Biograph = derive2 { name="Biograph"; version="2.0.6"; sha256="0vklqwbifbac3v9ws9fs22yxpqqk5b3m96qzr8j0irnimb5kgh5p"; depends=[Epi etm ggplot2 lubridate msm mstate mvna plyr reshape survival]; }; + Biolinv = derive2 { name="Biolinv"; version="0.1-1"; sha256="1fnx9fcybw8agc2zba61lk4ygq8qi3b747i5cnh1b3vh6dw5fapq"; depends=[classInt fields raster sp spatstat]; }; + BivRegBLS = derive2 { name="BivRegBLS"; version="1.0.0"; sha256="1fi399vv54dnfywxbc8yb1r58lrl7zpqkahvcx3f5svjy20dvvbw"; depends=[ellipse]; }; + BivUnifBin = derive2 { name="BivUnifBin"; version="1.1"; sha256="0dxkk3pjnbjx04r9870lcr3hl4r5j7cd3y1fn800fz0qjnv5dahd"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; BlakerCI = derive2 { name="BlakerCI"; version="1.0-5"; sha256="16zj678qzwqih92q19dma7a602d0hif2dhii5hvxdgjymg7hg2bj"; depends=[]; }; BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; }; - Blaunet = derive2 { name="Blaunet"; version="2.0.1"; sha256="0zpx4l5ig0xjnpsgw24b01nnf8w0aw6imjsg9715rm0qswa0jq5y"; depends=[network]; }; + Blaunet = derive2 { name="Blaunet"; version="2.0.4"; sha256="195ijmn3y9rzcincvjwivaclbs0d9bglb83ss62yfjzw2jpfvc54"; depends=[network]; }; BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; }; Blossom = derive2 { name="Blossom"; version="1.4"; sha256="0002rvz0mlwl2clglzqldg0x5l8lj07qh74ifpdaf1lrdailh328"; depends=[]; }; Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; - BoSSA = derive2 { name="BoSSA"; version="1.2"; sha256="191hq0np9iadks4sflg360k64xnz8j956y30pqzwciinb4hgq1nr"; depends=[ape SoDA]; }; + BoSSA = derive2 { name="BoSSA"; version="2.0"; sha256="1cj2k8ra26mnnvn3gqwl3z6qr9sy63rnszgb3a9y6dh4dkgk6hd2"; depends=[ape jsonlite RSQLite]; }; + BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; }; + Bolstad = derive2 { name="Bolstad"; version="0.2-33"; sha256="1i01bfcmzpy9i3f3x0pmw2c6ff4zx4vk13isdnvkhbbks6ppm394"; depends=[mvtnorm]; }; Bolstad2 = derive2 { name="Bolstad2"; version="1.0-28"; sha256="08cfadvl9jl9278ilsf8cm2i2a3i8zsa2f3vjzw2nlv85fwi2c7v"; depends=[]; }; BonEV = derive2 { name="BonEV"; version="1.0"; sha256="0lmgrg53b0abb5hidyjjmwn7lf2ani84k9fil7g6j6mdajjhh1b7"; depends=[qvalue]; }; - BoolNet = derive2 { name="BoolNet"; version="2.1.1"; sha256="0g8f2pv8s8kj84qcp2fy3h8p91ja6ap2dgxkdaf5kjv7r3hfddg0"; depends=[igraph XML]; }; - Boom = derive2 { name="Boom"; version="0.3"; sha256="0j5j4x77fqwgc6f6d91v02niq4mrdfi0x5id0mq9zdha0rnidcky"; depends=[BH MASS]; }; - BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="0.5.3"; sha256="0932jwc7bz84lryzaxd4lncqbkc3d0v2yh22dvryz2hf59a2a5lj"; depends=[BH Boom]; }; + BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; }; + BoolNet = derive2 { name="BoolNet"; version="2.1.3"; sha256="1s64a46wfp31jsyfdg2m8269qaq7x798y2bj0dyk69di1nxx2daa"; depends=[igraph XML]; }; + Boom = derive2 { name="Boom"; version="0.5"; sha256="1p1bgswzjply3afcgxdn67dq3gb46i9gxwm1l2v79wjpiizhagrb"; depends=[BH MASS]; }; + BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="0.7.0"; sha256="08xb931q3j16r4942p7r6cl4capc19nbywzg4hr7yv0fzcmpjprb"; depends=[BH Boom]; }; + BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; - Boruta = derive2 { name="Boruta"; version="5.0.0"; sha256="0sz9rbpxwjaz3l4kx4b616x2kfb2szv8s1qk4qv05smqf34hf8rw"; depends=[ranger]; }; + BootWPTOS = derive2 { name="BootWPTOS"; version="1.2"; sha256="1860l11xg7444l3x42rq3636csla23gg0mi5in1zibjwn1ddc202"; depends=[fractal wavethresh]; }; + Boruta = derive2 { name="Boruta"; version="5.2.0"; sha256="111rp7lbq79p7c1w4dkzhb9wh32mns5p17xxq0qbjzaiv41377dy"; depends=[ranger]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.0-6"; sha256="1080q7fw4yfl2y0jh3w2xz342i5yhhhavq40i3902bsmjj8g531d"; depends=[brglm gtools lme4]; }; - BrailleR = derive2 { name="BrailleR"; version="0.24.1"; sha256="181s8rz5n9yvnsg3nj7n43giyjiabrk3j1bl64z7aq3x15cx0xqs"; depends=[devtools extrafont gridGraphics gridSVG knitr moments nortest pander rmarkdown xtable]; }; + BrailleR = derive2 { name="BrailleR"; version="0.24.2"; sha256="07kd9x176gd3ccpskv7vn22jam1pknsywcd09qj7l4zfbv9l0rqx"; depends=[devtools extrafont gridGraphics gridSVG knitr moments nortest pander rmarkdown xtable]; }; + Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-4"; sha256="1saxa492f32f511vw0ys55z3kgyzhswxkylw9k9ccl87zgbszf3a"; depends=[]; }; BsMD = derive2 { name="BsMD"; version="2013.0718"; sha256="1yvazqlbmm221r7nkhrhi309gkk6vx7ji5xlvf07klya2zg20gcj"; depends=[]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; - BurStMisc = derive2 { name="BurStMisc"; version="1.00"; sha256="0718a1p7iiqkfhhmnzxggc6hd8sm847n1qh7rfbdl8b0k0bgvnj0"; depends=[]; }; + BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; + BuyseTest = derive2 { name="BuyseTest"; version="1.0"; sha256="1nfj2ajah2dg1p47g2z0zf9s24sxj4dfn3nny1h4qmqwcb4vs55g"; depends=[data_table lava Rcpp RcppArmadillo snowfall survival]; }; C50 = derive2 { name="C50"; version="0.1.0-24"; sha256="17ay0rbm2cg2s27mh09xg0knk7idx6f761sc849m41vsc6pfhzk1"; depends=[partykit]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-2"; sha256="00nsnzgjwkif7mbrw7msswjxhi9aysjdx3qg3i4mdmj1rmp7c4dc"; depends=[dynlm sandwich tseries urca]; }; - CALF = derive2 { name="CALF"; version="0.1.1"; sha256="1ikmlf6fkma2q281m012ifbxfavx4cywvf0igs4fxpkd7jm9frff"; depends=[]; }; + CADStat = derive2 { name="CADStat"; version="3.0.6"; sha256="1qzy93fzzj4b0x0m9rrlh1wmv44rd9kvjw6wkdd3m3l2qbqsbzn8"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; + CALF = derive2 { name="CALF"; version="0.1.3"; sha256="0407k1afyaknlvhn5gx909vp4jl5n25r9jyqkhx9zqhzllrj25f2"; depends=[ggplot2]; }; CALIBERrfimpute = derive2 { name="CALIBERrfimpute"; version="0.1-6"; sha256="036nwnday098mawc9qlgl3jjjcdjnja1immg6xkq27hvv2xfbz82"; depends=[mice mvtnorm randomForest]; }; CAM = derive2 { name="CAM"; version="1.0"; sha256="07mmrz6j8cm6zgaw2zcxgkxb7abd651kb80526r271snjgvpr5bl"; depends=[glmnet Matrix mboost mgcv]; }; - CAMAN = derive2 { name="CAMAN"; version="0.73"; sha256="0acksmgi7g0nngq5wcyrxzplxk6h8yi0s1q1pdkqna8dyriw7ih1"; depends=[mvtnorm sp]; }; + CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="0.11"; sha256="12d5558b3wldla3sgwqdqwmfixcqfa8h92bq4a8ia284946vcbbf"; depends=[Hmisc reshape2]; }; - CARBayes = derive2 { name="CARBayes"; version="4.4"; sha256="0ab259mglhli6443mgxsgzfmi7wam6m1498lc5ihha4px05cbkl0"; depends=[CARBayesdata coda MASS Rcpp sp spam spdep truncdist]; }; - CARBayesST = derive2 { name="CARBayesST"; version="2.2"; sha256="0kcx708g88hm70ss73cry4h4w2j32bj65rxn31sjfghgsnvd7fp6"; depends=[coda MASS Rcpp spam spdep truncdist]; }; - CARBayesdata = derive2 { name="CARBayesdata"; version="1.0"; sha256="19dhgkqpdcq1y866arb3qm7wbl348w66yl85kwajkmqgplx2pvaq"; depends=[shapefiles sp]; }; + CARBayes = derive2 { name="CARBayes"; version="4.7"; sha256="0frpkq0hqxmdzv5hliyvw3g8cb26llnh9wjabqqm0sdpnzx64d37"; depends=[CARBayesdata coda MASS matrixcalc MCMCpack Rcpp sp spam spdep truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="2.4"; sha256="1z0w4cbs3gbll4fzcmg4vgbnx0bq15nb1c69aql4mdqm6i0zx6xr"; depends=[CARBayesdata coda dplyr MASS matrixcalc Rcpp sp spam spdep truncdist]; }; + CARBayesdata = derive2 { name="CARBayesdata"; version="2.0"; sha256="0mlqlqm50k4lqyvbjva7vji9jqa3rwi5ky5521rp5l4nqlj53sfb"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; CARrampsOcl = derive2 { name="CARrampsOcl"; version="0.1.4"; sha256="1sdrir7h7xl1imipm9b71vca062dxqsqd8mg3w9f3s80x2aghxl8"; depends=[fields OpenCL]; }; - CAvariants = derive2 { name="CAvariants"; version="3.1"; sha256="0plxkz8slvk824ziwxc27dricid3ddm18bsl3dvqprarh9l1r0ja"; depends=[]; }; - CBPS = derive2 { name="CBPS"; version="0.10"; sha256="0k3mb97d49r870dm7ac1nwhy4kvh0936jmka7ib03154jmzsfyn7"; depends=[MASS MatchIt nnet numDeriv]; }; + CATT = derive2 { name="CATT"; version="1.0"; sha256="1hnhzla14y0cii51pi53a42bmsxcqvylj88fyvgpfavmvz301f7d"; depends=[]; }; + CATkit = derive2 { name="CATkit"; version="3.0.0.2"; sha256="1afaa1s8clynpna9hwgbgfdp5jciv0n5q9vb27cgyl9n69nla991"; depends=[magic MASS png rtf season signal]; }; + CAvariants = derive2 { name="CAvariants"; version="3.3"; sha256="14ly5pyhvsbz08p0pk1ijwivz17jrnd0qqzn4n9jqzc9b8yml4dw"; depends=[]; }; + CBPS = derive2 { name="CBPS"; version="0.13"; sha256="16g62pvxd2njawk2sfaznhicy1dfxab3v1k0bfrzj5a4l1501l2z"; depends=[MASS MatchIt nnet numDeriv]; }; CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; }; CCAGFA = derive2 { name="CCAGFA"; version="1.0.8"; sha256="1jxb6d1h5p97wnr45s1fsspksqn771nib415ihxi4vj5w8s94j8b"; depends=[]; }; CCM = derive2 { name="CCM"; version="1.1"; sha256="0gya1109w61ia6cq3jg2z5gmvjkv9xg71l2rxhrrf6bx1c2nsrq6"; depends=[]; }; CCMnet = derive2 { name="CCMnet"; version="0.0-3"; sha256="0mbw3yhlgnmq7q4wnwiff7rlmciq83cch7kkav3wll6nqvxcdiax"; depends=[ergm network sna]; }; CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; - CCTpack = derive2 { name="CCTpack"; version="1.4"; sha256="09s2ysqsz158lrah44rwvs3nlhyqlvwcj6aar2p79flf4xxdwsvk"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; + CCTpack = derive2 { name="CCTpack"; version="1.5.1"; sha256="0j4c7w5jfixsjhpn460iai7q0dd9znchp1iv7dxvyqdm45149p36"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; CCpop = derive2 { name="CCpop"; version="1.0"; sha256="10kgw3b98r0kn74w89znq6skgk8b3ldil6yb0hn5rlcf6lazjzca"; depends=[nloptr]; }; + CDF_PSIdekick = derive2 { name="CDF.PSIdekick"; version="1.2"; sha256="1h2d5xh7zj3d8r63qndvd5c8z52byn1852b51zmj6ypc90fil25x"; depends=[Rcpp]; }; CDFt = derive2 { name="CDFt"; version="1.0.1"; sha256="0sc8ga48l3vvqfjq3ak5j1y27hgr5dw61wp0w5jpwzjz22jzqbap"; depends=[]; }; CDLasso = derive2 { name="CDLasso"; version="1.1"; sha256="0n699y18ia2yqpk78mszgggy7jz5dybwsi2y56kdyblddcmz1yv7"; depends=[]; }; - CDM = derive2 { name="CDM"; version="4.8-0"; sha256="0k99ppspr3k7lgjxqbnp2fwvpl3zidi1c0zzwwj7i4v29nbf4fiq"; depends=[lattice MASS mvtnorm plyr polycor psych Rcpp RcppArmadillo sfsmisc]; }; + CDM = derive2 { name="CDM"; version="5.4-0"; sha256="1gbzk9iijn37njal6fq70y6hhl44zgi79yb3lwp3cxys1j2fp0kw"; depends=[lattice MASS mvtnorm plyr polycor psych Rcpp RcppArmadillo sfsmisc]; }; CDNmoney = derive2 { name="CDNmoney"; version="2012.4-2"; sha256="1isbvfq0lygs75y1hn3klqms8q7g1xbkcr8fgj75h1c99d4khvm6"; depends=[]; }; - CDROM = derive2 { name="CDROM"; version="1.0"; sha256="0dnaviaw9zfkdss2mjk7mccgrfya70491hqzx6wdlpzspchzm9ni"; depends=[]; }; + CDROM = derive2 { name="CDROM"; version="1.1"; sha256="0mvhqs4m8jp39x1rk31a1sqqmfq1avcnasgh8bizlyxx62igmi1b"; depends=[]; }; CDVine = derive2 { name="CDVine"; version="1.4"; sha256="0cp78pb6yny4n5q2j9k6xdql588536572gbphnw8zkdmrg65qyz7"; depends=[igraph MASS mvtnorm]; }; - CEC = derive2 { name="CEC"; version="0.9.3"; sha256="05cgd281p0hxkni4nqb0d4l71aah3f3s6jxdnzgw8lqxaxz4194i"; depends=[]; }; - CEGO = derive2 { name="CEGO"; version="2.0.0"; sha256="1rsia7dnbc2hwrihdxdaspwm8xfvc7ryy3sgki801xv3la4nzk8p"; depends=[DEoptim MASS]; }; - CEoptim = derive2 { name="CEoptim"; version="1.1"; sha256="130x215lwm8lsygxnkykhiv80ry7srs9n77rcyjgxag9f1hn223x"; depends=[MASS msm sna]; }; + CEC = derive2 { name="CEC"; version="0.9.4"; sha256="194n190szwzxjxfdhiah1f50vp6n7f3q567yky7pq1x2hngna5rs"; depends=[]; }; + CEGO = derive2 { name="CEGO"; version="2.1.0"; sha256="141gr1sin6sgvjasm6sczvq2za25ybw7wapdljdx2lx7qhgq77rk"; depends=[DEoptim expm MASS Matrix quadprog]; }; + CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; CFC = derive2 { name="CFC"; version="1.0.1"; sha256="0p4ijhks2jj9a417k9mp670q59d0wi3pfhqkx005cbsficynf0y2"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; CGP = derive2 { name="CGP"; version="2.0-2"; sha256="1mggv3c8525vbdfdc3yhpp4vm4zzdvbwyxim29zj0lzwjf9fkgqk"; depends=[]; }; CHAT = derive2 { name="CHAT"; version="1.1"; sha256="1hl4xr4lkvb7r36gcbgax6ipqc3rsvn1r03w7fk9gf9bbyg7bkhg"; depends=[DNAcopy DPpackage]; }; CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; }; - CHNOSZ = derive2 { name="CHNOSZ"; version="1.0.7"; sha256="1kvw3fpimfcjf49kk9vf8bdjd76z7g54i7hn4d71swm3p9zfyb7a"; depends=[]; }; + CHFF = derive2 { name="CHFF"; version="0.1.0"; sha256="0jv75p1bnwsad2vpxf1zwq97al9xxhk2hpnpsilf0jn0w7g9b2d3"; depends=[]; }; + CHNOSZ = derive2 { name="CHNOSZ"; version="1.0.8"; sha256="03hvvkm7i2q73hkcm79136lzjn99apqmcdlfghbz0318490gxin5"; depends=[]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; + CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.1"; sha256="11cicxfvjhbrfjsczsv25xdy7pckmz1bnjx7xq5jbg3b1wbv4g28"; depends=[Matrix mvtnorm numDeriv stringr]; }; CIDnetworks = derive2 { name="CIDnetworks"; version="0.8.1"; sha256="0k75mdlvm0rccag42pnhsni1kihpqsnj5bsrwlj7hdf7n8k1xb77"; depends=[igraph MASS msm mvtnorm numDeriv pbivnorm Rcpp]; }; - CIFsmry = derive2 { name="CIFsmry"; version="1.0.1"; sha256="118vyiiy4iqn86n9xf84n5hrwrhzhr1mdsmyg9sm6qq6dm7zg6la"; depends=[]; }; + CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; }; CINID = derive2 { name="CINID"; version="1.2"; sha256="0pkgzi2j0045p10kjvnq8f4j1agzrqfw0czvvfrzj9yjfpj8xc99"; depends=[]; }; CINOEDV = derive2 { name="CINOEDV"; version="2.0"; sha256="0fjpxahc55zd972p3hlw9fk4dq8hpq715xff8p98kfh29dvw9mnz"; depends=[ggplot2 igraph R_matlab reshape2]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; - CLME = derive2 { name="CLME"; version="2.0-4"; sha256="1ymaqvmq0ji82kb4c84a6fdz15ri797k9n218kawz21xvx8ilr7w"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; + CLME = derive2 { name="CLME"; version="2.0-6"; sha256="0cd3sn6amariap04lhc2kwsdcj4i4axrx95xr10spykr8py4skmc"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; }; CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; }; CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; }; - CMplot = derive2 { name="CMplot"; version="3.0.3"; sha256="0j6flj176qy132xdj3jy1xpvb4qpwr5jbyxgp59diaqs5nnz33qy"; depends=[]; }; + CMplot = derive2 { name="CMplot"; version="3.1.4"; sha256="0ph8pqmlbm2j40dq4lqyfy43hz5s958vvqaglzmcqdvkgpv1ni0a"; depends=[]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; - CNVassoc = derive2 { name="CNVassoc"; version="2.1"; sha256="0gwyhipkvvnivdahr9mkj1b8j9wzg6g8mcsvk5rq28xdzrskz0i8"; depends=[CNVassocData mclust mixdist survival]; }; + CNVassoc = derive2 { name="CNVassoc"; version="2.2"; sha256="0rvb5sl7kfyb9jp07w4zk8817s9xld9b2cb0m33lrs4kbsv7rpnx"; depends=[CNVassocData mclust mixdist survival]; }; CNVassocData = derive2 { name="CNVassocData"; version="1.0"; sha256="17r3b1w9i9v6llawnjnrjns6jkd82m2cn9c90aif8j0bf4dmgdli"; depends=[]; }; CNprep = derive2 { name="CNprep"; version="2.0"; sha256="08dpjikx3ldqzw2kwb12q0kbw15qzl09srjdfs0sz9si0x6bfxs6"; depends=[mclust rlecuyer]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; + COCONUT = derive2 { name="COCONUT"; version="1.0.1"; sha256="1bpn1zhlbm99w8d80lp7iasi1ivvh0ndhpzh8glmnlnanm2b06ni"; depends=[]; }; + COMBAT = derive2 { name="COMBAT"; version="0.0.2"; sha256="1sda41db8h5gi7gqq0hj433dd6lh4xj75skjgmgqa3p80rndw461"; depends=[corpcor mvtnorm]; }; COMBIA = derive2 { name="COMBIA"; version="1.0-4"; sha256="02yadw3zjkj0ljq2c5k5zfsn8qnlvr6gxgafzrqw9g95cawv8q4x"; depends=[gdata hash lattice latticeExtra oro_nifti]; }; COMMUNAL = derive2 { name="COMMUNAL"; version="1.1.0"; sha256="1fv5dlqajpsd9k99sfikj3ai4jpzz2fh4s3gfglwrajk0nzlxjg2"; depends=[cluster clValid fpc]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.3.5"; sha256="15w78h0kkqbisp34g4wj2mkq4c0pb2166f1m7s65iifnnd5plvb6"; depends=[]; }; CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; + CONS = derive2 { name="CONS"; version="0.1.0"; sha256="1pcr1pfchys4x566sa69als59vwpaa91jhl038pkj69scchv0max"; depends=[FactoMineR gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.47.1"; sha256="0apsv6lam5a6miirhq6z0acm4xnynyskqp94cxvxpgkaaap2c55l"; depends=[cluster rpart]; }; + CORElearn = derive2 { name="CORElearn"; version="1.48.0"; sha256="1pm2gqns1d7yxv4i5h110b6s6i6an7xnz379n1cm8rcfnlpndryz"; depends=[cluster rpart]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; - COUNT = derive2 { name="COUNT"; version="1.3.2"; sha256="1lb67gwznva5p046f4gjjisip5a12icp7d2g1ipizixw99c5lll8"; depends=[MASS msme sandwich]; }; + COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; }; - CP = derive2 { name="CP"; version="1.5"; sha256="0hzp4h7bhhxn336kkq27phplk7idwk27jjsp6zimwl8fq3ylh0dr"; depends=[survival]; }; + CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; }; + CPBayes = derive2 { name="CPBayes"; version="0.1.0"; sha256="004n2s09b8wfg8aj7j400hvkbwxsxd27fyk72x6nnc8lkrpwzs5b"; depends=[MASS]; }; CPE = derive2 { name="CPE"; version="1.4.4"; sha256="09sqp2a0j43jr9ya9piv8575rwd5fdvwmiz4chv75r3mw8p128mn"; depends=[rms survival]; }; CPHshape = derive2 { name="CPHshape"; version="1.0.1"; sha256="05krqcd4spgghp3ihv1zfql6ikd64vkqnrjghjvfki3hi3zi5k7h"; depends=[]; }; CPMCGLM = derive2 { name="CPMCGLM"; version="1.1"; sha256="1w8yp37vxz2cl0yqdzpyxdfq2scz2h9i4crjzjmjzpzffi45f06s"; depends=[mvtnorm plyr]; }; CR = derive2 { name="CR"; version="1.0"; sha256="0smb2i560dwbxg3mp1svfxmaiw193pd3klwqq0i27czf07k1xfvj"; depends=[]; }; CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; }; - CRF = derive2 { name="CRF"; version="0.3-8"; sha256="0w9wfjlx6hvd07k0iszfyip0vn0ca5ax2d5g7hsg6pm2isnzap8a"; depends=[Matrix Rglpk]; }; + CRF = derive2 { name="CRF"; version="0.3-14"; sha256="0xhjj76730yjlpwbhcpdzqp7s37a9rhf4adk1s7hfb0jm8b76fgh"; depends=[Matrix Rglpk]; }; CRM = derive2 { name="CRM"; version="1.1.1"; sha256="09h6xvqc2h2gxhdhc7592z93cnw16l549pn9i26ml0f0n20hljmf"; depends=[]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; - CRTgeeDR = derive2 { name="CRTgeeDR"; version="1.1"; sha256="10gm6dmn8hwg5kbfvzdjfdvsv6ii0hn00512jchfj1f6gxxq5ha2"; depends=[ggplot2 MASS Matrix]; }; + CRTgeeDR = derive2 { name="CRTgeeDR"; version="1.2"; sha256="0dq5q1gb392imfgqhzqphc7h5af0qcx2vx4fh77gwpz08ycrlkmg"; depends=[ggplot2 MASS Matrix]; }; + CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; + CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; }; CTT = derive2 { name="CTT"; version="2.1"; sha256="0v8k54x9pib6hq3nz3m80g1a3p003f7bn8wnj9swwvacc90d6n44"; depends=[]; }; CTTShiny = derive2 { name="CTTShiny"; version="0.1"; sha256="1c9vsiqyig6kfjpy3dfrysc466h4v9530m49aynz65i1njplswyh"; depends=[CTT ltm psych shiny shinyAce]; }; - CUB = derive2 { name="CUB"; version="0.0"; sha256="0a3iz90i0mshfxqykbfyrhmy45iyzh81r680hasvrbakqnm94a82"; depends=[]; }; - CUMP = derive2 { name="CUMP"; version="1.0"; sha256="0dbpgm75nbd4h8rf3ca5n4mgdn3qm4yyf2d48vlihakzw6rqbpka"; depends=[]; }; - CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.1"; sha256="0ng0k6bkvgsrsgx0qj9mhhll837j0vixa2p24fjmcpi1dyjahgi5"; depends=[]; }; + CUB = derive2 { name="CUB"; version="1.0"; sha256="1csgsfxq80kh7s52f2658gs4c6nf1vpcmq0xizcjira2wnwpdzmv"; depends=[Formula]; }; + CUFF = derive2 { name="CUFF"; version="1.2"; sha256="11sqd84sq8rmbvx4mqvmfajxzsj68n286dgmv7vm9lkmvc7765bs"; depends=[openxlsx xtable]; }; + CUMP = derive2 { name="CUMP"; version="2.0"; sha256="0rdscywmi4sylpjpr8r472iapddizb1mqyrd532cvw6frxins7w0"; depends=[]; }; + CUSUMdesign = derive2 { name="CUSUMdesign"; version="1.1.3"; sha256="149d16d5y7zxkzq8gmb5spfrvirv0vyhk2qx0v7vclkr8adz9sva"; depends=[]; }; + CVD = derive2 { name="CVD"; version="1.0.2"; sha256="0agb0liwbp4wvmxbyxgfb7471ki1agfb6ssh77kvwbkxqmrc8d96"; depends=[]; }; CVST = derive2 { name="CVST"; version="0.2-1"; sha256="17xacyi8cf37rr2xswx96qy7pwkaqq394awdlswykz3qlyzx4zx2"; depends=[kernlab Matrix]; }; CVThresh = derive2 { name="CVThresh"; version="1.1.1"; sha256="19d7pslzj8r3z5gn3cplpz2h2ayz6k1nrfx3s2b7a8w1il3vmi69"; depends=[EbayesThresh wavethresh]; }; CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; }; CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; }; CaDENCE = derive2 { name="CaDENCE"; version="1.2.3"; sha256="1810a785czaxwfvhjnmhzqg743mgcgrdp3j1irlfl9pbli0ppidx"; depends=[pso]; }; Cairo = derive2 { name="Cairo"; version="1.5-9"; sha256="1x1q99r3r978rlkkm5gixkv03p0mcr6k7ydcqdmisrwnmrn7p1ia"; depends=[]; }; - Canopy = derive2 { name="Canopy"; version="1.0.0"; sha256="0bl9yjm8433nfx0k9vv2pyiv5zjnwsfi55q8pp10bv3b6v35g2vm"; depends=[ape fields]; }; - CarletonStats = derive2 { name="CarletonStats"; version="1.2"; sha256="07jjdhrz0chcgx0ivd5b6ig2936fq2hdhrflqmifm2mqbc7cgqbh"; depends=[]; }; + Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.1"; sha256="1wgksvfkpbr7sicfnv9g5w04kbrb9pwl40aqbflzy9kmqbjy5hhx"; depends=[]; }; + CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.0"; sha256="1r3318rzh29cgq72gdp16z60xkan7hyh1vj4gjg3pzbxy8zawqxx"; depends=[survey]; }; + CampaR1 = derive2 { name="CampaR1"; version="0.8.4"; sha256="0qlbrmqfs38bg9hsmvzd3cfgsbd2zx99f64bjv1gfhkmysmg1ysb"; depends=[bio3d ggplot2]; }; + Canopy = derive2 { name="Canopy"; version="1.1.1"; sha256="0hv7ar4kj3d7cfpj2j5wcdbzag7w7x0zifay5hdyr0j6v776zvh6"; depends=[ape fields]; }; + CarletonStats = derive2 { name="CarletonStats"; version="1.3"; sha256="1a8ic2ny2zkqy6xsnzhlc3hybhk200d8jbdbjfy7jav7n757kr0y"; depends=[]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-0"; sha256="0bdixcf1iwbmjd2axi6csrzms25ghdj4r6223qhk2b54wlmbzaiz"; depends=[BB optimx]; }; + CatEncoders = derive2 { name="CatEncoders"; version="0.1.0"; sha256="1vg8a4v0fj8c4dwpynl8jf9d9lpjl08xpzkr4aa32gqkkk016mh3"; depends=[data_table Matrix]; }; CateSelection = derive2 { name="CateSelection"; version="1.0"; sha256="194lk6anrb05gaarwdg8lj5wm6k61b4r702cja3nf3z91i8paqi7"; depends=[]; }; CausalFX = derive2 { name="CausalFX"; version="1.0.1"; sha256="0v0diqq9fa1v9n3v5m5shvwlgmj91cbbb78243rwib1h3pyacihf"; depends=[igraph rcdd rje]; }; CausalGAM = derive2 { name="CausalGAM"; version="0.1-3"; sha256="0g68m2kxixwr7rx65r57m1n0qa161igc428zh9rj91fg6h4pdq4w"; depends=[gam]; }; Causata = derive2 { name="Causata"; version="4.2-0"; sha256="04lndjy4rdf063z75zv42b000z06ffnr91pv2sql1ks6w60zmh1m"; depends=[boot data_table foreach ggplot2 glmnet R_utils RCurl rjson RMySQL stringr XML yaml]; }; CePa = derive2 { name="CePa"; version="0.5"; sha256="1y2q72j8bqx509i62a2x9j40rj5bkpgx4z6fwj05ibazc1441asd"; depends=[igraph snow]; }; CellularAutomaton = derive2 { name="CellularAutomaton"; version="1.1-1"; sha256="0kmw2ic161xwalqa63hznic4n4hdz20hsilf2awlcldg7m9si1zd"; depends=[R_methodsS3 R_oo]; }; - CensMixReg = derive2 { name="CensMixReg"; version="0.7"; sha256="0ricfbm1k7dvsj658sj9ava8xgwqzypi99ihn41llnfdgdnslifs"; depends=[mixsmsn]; }; + CensMixReg = derive2 { name="CensMixReg"; version="1.0"; sha256="0plqirl6vhk2rx9q2kgniq7km9jl1g6xdn74sdjpdcm4srmr7074"; depends=[mixsmsn mnormt mvtnorm]; }; CensRegMod = derive2 { name="CensRegMod"; version="1.0"; sha256="0qqwkxn8knhcjb6mph7mp7mma56zxslbvkfgfajq2lq4gbg901y4"; depends=[]; }; + CensSpatial = derive2 { name="CensSpatial"; version="1.2"; sha256="07zi8mxzrqfdcyrrgch9yn0dpmvj5aj2d10q26cnykifsdbaq12c"; depends=[geoR lattice moments msm mvtnorm numDeriv optimx psych raster tmvtnorm]; }; CepLDA = derive2 { name="CepLDA"; version="1.0.0"; sha256="15vhk7l5mw2kicw2x60r4z71hc415g8kaf2p06jgf7ykxmzkj7kg"; depends=[astsa class MASS multitaper]; }; - CerioliOutlierDetection = derive2 { name="CerioliOutlierDetection"; version="1.0.8"; sha256="0n67y7ah496wck9hlrphya9k753gk44v7zgfz4s2a5ii49739zqi"; depends=[robustbase]; }; + CerioliOutlierDetection = derive2 { name="CerioliOutlierDetection"; version="1.1.5"; sha256="1q6dcikmk5la5msb4gml0llvbb9262bsgmdhxi75myv4jlb3b8p9"; depends=[robustbase]; }; CfEstimateQuantiles = derive2 { name="CfEstimateQuantiles"; version="1.0"; sha256="1qf85pnl81r0ym1mmsrhbshwi4h1iv19a2wjnghbylpjaslgxp6i"; depends=[]; }; - ChainLadder = derive2 { name="ChainLadder"; version="0.2.2"; sha256="1lxcy7q02lgsi575z1l1bxhxrgc3qcf2ln09pf4rb4diw7fs6ply"; depends=[actuar cplm ggplot2 lattice Matrix reshape2 statmod systemfit tweedie]; }; - ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.5"; sha256="0hgvcvqgqn22n874y268rchy88jgyp4lv5nbdyzgyay2arwsjjdy"; depends=[Rcpp RcppArmadillo]; }; + ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; }; + ChainLadder = derive2 { name="ChainLadder"; version="0.2.4"; sha256="0wp8cihvyrlbixzpp7fhr5qcsq46m54j0m4az97b0v6lwr5dfp4w"; depends=[actuar cplm ggplot2 lattice MASS Matrix reshape2 statmod systemfit tweedie]; }; + ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; }; + ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.10"; sha256="1a1fzlp5fc5l357gklya096cwry26hymxrlpqsy1xdr60fd7pfx5"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.1"; sha256="0qy92ij1riynz7dhri3z85pafww5w9j1gx1bcgr8phlr32a7had7"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; + Chaos01 = derive2 { name="Chaos01"; version="1.0.1"; sha256="061z1cm55d0vxf9ly8hdhqb0qapqkyvhnfg44nnfh43a6a6kv339"; depends=[]; }; ChaosGame = derive2 { name="ChaosGame"; version="0.2"; sha256="1d6c2zjh7d5d1abi07d9akjjbpccvlnra96f2w58rdr87dy757zq"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="4.2.8"; sha256="1ym2fy6dg2v9z6bld99snnydmmd03sr5m6clf9m2xwnkm252wcr4"; depends=[plyr rgl]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.17"; sha256="1v4mzkhr6y90nhxnq28aklh76f3imv1cxch50vj5k23d744djx8f"; depends=[plyr]; }; ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.9"; sha256="095jahs7n591fam7s6i38h2iw5jbl005n040s1i489zzmsnj2n6d"; depends=[ChemometricsWithRData kohonen MASS pls]; }; ChemometricsWithRData = derive2 { name="ChemometricsWithRData"; version="0.1.3"; sha256="14l1y4md8hxq8gvip5vgg07vcr0d9yyhm5ckhzk8zwprdabn9a10"; depends=[]; }; + ChoR = derive2 { name="ChoR"; version="0.0-1"; sha256="1zxzgmww368zfdd3fq4wmj4v9prh8fqdb2d3wplqszxjf1irmb45"; depends=[rJava]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; CircE = derive2 { name="CircE"; version="1.1"; sha256="14bja3zv9wg389m6khmsy3q12hhnfcp49rvrmw47y6fh5m7ihrz2"; depends=[]; }; - CircNNTSR = derive2 { name="CircNNTSR"; version="2.1"; sha256="1rl17kw6bl5xf7pgsc4im12i2kqz4a3b11vzzlb6wfl5yck6iff5"; depends=[]; }; + CircNNTSR = derive2 { name="CircNNTSR"; version="2.2"; sha256="0z29dsvcwpra1ny8kj486dpnrak272wmkfnaiyashzcqpnkmkg03"; depends=[]; }; CircOutlier = derive2 { name="CircOutlier"; version="3.2.3"; sha256="1vyac4mjkn6p4p9n5finqqak6g7m3hj04a66v3w797jn1wbd1xly"; depends=[CircStats circular]; }; CircStats = derive2 { name="CircStats"; version="0.2-4"; sha256="1f2pf1ppp843raa82s2qxm3xlcv6zpi578zc4pl0d7qyxqnh603s"; depends=[boot MASS]; }; + Cite = derive2 { name="Cite"; version="0.1.0"; sha256="1gfjirhswh4dkz88z4gl8m8jznqrvcgd4z3mnszyg1k5w3avlf1q"; depends=[miniUI RefManageR rstudioapi shiny]; }; CityPlot = derive2 { name="CityPlot"; version="2.0"; sha256="0lskgxmagqjglvpq39hgbygkf4qp28i2bj6b4m2av1s3pzb4465g"; depends=[]; }; - Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="3.3.1"; sha256="0gzwcg6f3p1vr30lyniqiq4893kjxri4y2vjzh6qrldnay42kqf9"; depends=[]; }; + Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.0.1"; sha256="148yfsz8di73iy81l2b97a7jcr3d3gs4a4jzjgybs7305ld1ngrq"; depends=[]; }; ClamR = derive2 { name="ClamR"; version="2.1-1"; sha256="0raz1n79g24a9mc93zj49r20xcmdziw6vvcw5sd3qyjp1ycia13c"; depends=[]; }; - ClickClust = derive2 { name="ClickClust"; version="1.1.4"; sha256="17r8jzhzwqa5h04bxdcyv31jhk6c709sx5m1z53jh3yf9zmkilvi"; depends=[]; }; - ClimClass = derive2 { name="ClimClass"; version="2.0.1"; sha256="13h6qj7wda5n1vgfqpclp0n3ir4qqqm7f00zlnq7dfpifd7ci4vn"; depends=[geosphere ggplot2 reshape2]; }; - CluMix = derive2 { name="CluMix"; version="0.3"; sha256="1yaznpv1aiqpg5ywqypharf8vigvgw0ihik7m8wfjbj2rzmlhj33"; depends=[ClustOfVar DescTools extracat FD gplots Hmisc marray Matrix]; }; + ClickClust = derive2 { name="ClickClust"; version="1.1.5"; sha256="0b46f453mffg4ym6yvmh7g3v05mc9gphwfra75j28y1425s87yvw"; depends=[]; }; + ClimClass = derive2 { name="ClimClass"; version="2.1.0"; sha256="1r836md31z2r5d9xckkbalzbhm4kf5paljv71kxpy53q92k7yi91"; depends=[geosphere ggplot2 reshape2]; }; + ClimDown = derive2 { name="ClimDown"; version="1.0.2"; sha256="0dbv5vn985bi9nqxhq7jcj6k38s8dlbqnln3adgd0ih2fwilvalg"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; + CluMix = derive2 { name="CluMix"; version="1.3.1"; sha256="0kq0max4v9860dv76lprzq5wzdcbvzzjzqnzxrskic5r3yk6jf28"; depends=[Biobase ClustOfVar DescTools extracat FD gplots Hmisc marray Matrix]; }; ClueR = derive2 { name="ClueR"; version="1.1"; sha256="1pk8l1qsiaypj34kbc3ikznn16ndn1alf1kgx0cx6pkhn2fpan2l"; depends=[e1071]; }; ClustGeo = derive2 { name="ClustGeo"; version="1.0"; sha256="0n7i6lwc86cizpn5ibd6k9i41w8fcbh1cdxqm7w52z024w0z40jh"; depends=[FactoMineR plyr rCarto]; }; - ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.3"; sha256="1yvz5qpmagmld757nlc641imiv715mgwkni1d04zq99rf0bvxapf"; depends=[Rcpp]; }; + ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="0.8"; sha256="17y8q2g4yjxs2jl1s8n5svxi021nlm0phs1g5hcnfxzpadq84wbs"; depends=[]; }; - ClustVarLV = derive2 { name="ClustVarLV"; version="1.4.1"; sha256="02a3ljds8hlkmpa0hw2mm51abimw23dnvr8c08bx2671284nwzmc"; depends=[Rcpp]; }; + ClustVarLV = derive2 { name="ClustVarLV"; version="1.5.1"; sha256="11zydj3iq15sg84kny6nklpmh8wj9j9nklkknzfqnaagai8jgsmy"; depends=[Rcpp]; }; + ClusterR = derive2 { name="ClusterR"; version="1.0.5"; sha256="1x4rkj4b8n8zirzzmkxa20n50msj6mw41j2gkr276pcs37paf772"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; + ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; + ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; CoClust = derive2 { name="CoClust"; version="0.3-1"; sha256="00i0dghd35s91kkkxj1ywa5i93752mfa5527ifclw4xxxshppva8"; depends=[copula gtools]; }; - CoImp = derive2 { name="CoImp"; version="0.2-3"; sha256="04n0drx98hi8hmlb5xwl87ylv03j1ld04vp9d8s5sphvm9bbx690"; depends=[copula gtools locfit nnet]; }; + CoFRA = derive2 { name="CoFRA"; version="0.1001"; sha256="1nb6054mb8md3i0108n6jgwc9ydn9vn82q01jlnynfq2r3j06drw"; depends=[gplots Rcpp]; }; + CoImp = derive2 { name="CoImp"; version="0.3-1"; sha256="0zj152w4cvnbfl144ggs3ixmyywxf9dqhh04jfydmv2a8n6px89n"; depends=[copula gtools locfit nnet]; }; + CoSeg = derive2 { name="CoSeg"; version="0.38"; sha256="1fkaq5zwy8j17jvpv0kzmq40km83qn9s556661ghknzp7w8flih8"; depends=[fGarch kinship2]; }; CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; - CollocInfer = derive2 { name="CollocInfer"; version="1.0.2"; sha256="0bs4ivnk394l7xjxyvg7fhlfi3vdscp1c27dpvilrlmfikbzpc33"; depends=[deSolve fda MASS Matrix spam]; }; + CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; }; + CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; }; ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; }; ComICS = derive2 { name="ComICS"; version="1.0.3"; sha256="1jfs0ygr88532jjw2ablyn2r3sg3hfsv5yrm4gkdgzakychj3dy2"; depends=[glmnet]; }; CombMSC = derive2 { name="CombMSC"; version="1.4.2"; sha256="1wkawxisn9alpwrymja8dla8n25z2fhai3l2xhin0b914y2kai09"; depends=[]; }; - CombinS = derive2 { name="CombinS"; version="1.1"; sha256="18wanir5vqk5i65hd6gr2za1xd26yfa0c3c029dbxsrsczwmb9xi"; depends=[]; }; + CombinS = derive2 { name="CombinS"; version="1.1-1"; sha256="06g41zbjl54cbhhs8q7l4bbvszclvbxn3m2dqg800d6ghs9vgl6v"; depends=[]; }; Combine = derive2 { name="Combine"; version="1.0"; sha256="0n3jkxf4s778d6fzcanb2b09xhpv5sqzawpg17bbfngfhp0vfyrq"; depends=[]; }; CombinePValue = derive2 { name="CombinePValue"; version="1.0"; sha256="0mlngyz2nq7s39javnnjbb5db93c5sg9daw2szng83mbyfza4hv2"; depends=[]; }; + CombinePortfolio = derive2 { name="CombinePortfolio"; version="0.3"; sha256="0w4mw748ix7jyqfirr8bm93i742y7bpir7q5x1j3r9cqpi9h5zfv"; depends=[]; }; + CommEcol = derive2 { name="CommEcol"; version="1.6.4"; sha256="02fmiil8sy5dwkpcdabcz5yhn7h9vlrsyyc9ilnmzb62z5447kdz"; depends=[ape gmp picante vegan]; }; CommT = derive2 { name="CommT"; version="0.1.1"; sha256="1kimm8z3k7p5lxsjnkb203js2rqn09grywxs890fab1hhgssgv2r"; depends=[ape ggplot2 gridExtra phangorn reshape]; }; CommonJavaJars = derive2 { name="CommonJavaJars"; version="1.0-5"; sha256="0kwf504g1izyy7hxss21dgz26w0spxibdlacrjdh7q10z799hfhh"; depends=[]; }; CommonTrend = derive2 { name="CommonTrend"; version="0.7-1"; sha256="088pg2hy2g2jgs84xawrnsf7gpvrpqjsimkx7g0i5r5fmkx169f9"; depends=[MASS urca]; }; CommunityCorrelogram = derive2 { name="CommunityCorrelogram"; version="1.0"; sha256="1wkrm5lil595sc4ih3qsf4sgvfipzlav0n7339ixqw9zxm2pg4nj"; depends=[vegan]; }; - Comp2ROC = derive2 { name="Comp2ROC"; version="1.1"; sha256="0vhpw6k9barcx5fl3kw3r7152mcrlpr127i5b70bx64g8g9ffs1v"; depends=[boot ROCR]; }; + Comp2ROC = derive2 { name="Comp2ROC"; version="1.1.4"; sha256="06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d"; depends=[boot ROCR]; }; CompGLM = derive2 { name="CompGLM"; version="1.0"; sha256="04bjal92r0m7is5ygqpd0mdz3fb3pwcr7rc3mbxg9sg57nff3kf5"; depends=[Rcpp]; }; CompLognormal = derive2 { name="CompLognormal"; version="3.0"; sha256="1dhgr9l713l2n889bpa47lbg2qab0fz0r15qa928c0b9nz688ddm"; depends=[numDeriv]; }; - CompQuadForm = derive2 { name="CompQuadForm"; version="1.4.1"; sha256="1kv4bdkwidkjw0hgn2krv42p9v1a03p47g0p03lja3flhfbmiifj"; depends=[]; }; + CompQuadForm = derive2 { name="CompQuadForm"; version="1.4.2"; sha256="0bsgbdblxpv57mbwnf51xyiydp2bqyxkg4zzwqki85cv5xqlrq1n"; depends=[]; }; CompR = derive2 { name="CompR"; version="1.0"; sha256="1k4q0yanvhdh3ksia7d42lxky19yci5vxhmi6h716g9sxzfsjk6b"; depends=[MASS]; }; CompRandFld = derive2 { name="CompRandFld"; version="1.0.3-4"; sha256="1a3j5j50fz3f8vkvdmfccv5hn00spk08xanadqxpdy8pn925gqqb"; depends=[]; }; - CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.1.4"; sha256="0x5flqwx49ar18hg2790rr28glypx8xyxp0ncjg4v5v18l82qd9s"; depends=[Matrix]; }; - CompareTests = derive2 { name="CompareTests"; version="1.1"; sha256="1assdqwr5qhwfqhc8gpfa53kcmd4dy5fb449pm4ng0n674qvra6c"; depends=[]; }; - Compind = derive2 { name="Compind"; version="1.1"; sha256="1435b8g6dzim7hff6kvxgx00linx5gk9y7zidbmishsybv5r1mar"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff psych]; }; - ComplexAnalysis = derive2 { name="ComplexAnalysis"; version="1.0"; sha256="1yk0r3iwxirjsksnpwpnrgq4yhni6in9kgxxrs7v51l35zn78kji"; depends=[]; }; - Compositional = derive2 { name="Compositional"; version="1.1"; sha256="167823g2a3cnnkmvhdc5wnjic0ih1xz2xfymgh5dicfzr9inasb5"; depends=[BB doParallel foreach MASS mixture quantreg sn]; }; + CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.1.5"; sha256="0z9fjd344wc5bisir7hf64abli7in8b5860y1012vmah4vz9knlr"; depends=[Matrix]; }; + CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; + Compind = derive2 { name="Compind"; version="1.1.2"; sha256="14y18vvj13f3wi5gzrwabmj908hh1c2mizw98a36xxzlxw79fipd"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff psych]; }; + Compositional = derive2 { name="Compositional"; version="2.2"; sha256="06s101fa8iv1sdg6x5yz3fl08mjjw265ff9kj9dxds02h036b84s"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6"; sha256="1kkc4xp5b6q54b76wk4ga28wl668psbpyivl6bnh3xm21276yx5k"; depends=[Rcpp]; }; + ConR = derive2 { name="ConR"; version="1.1"; sha256="1jl6pp0g7qrp0h5771r03gjiy4g7xbqw12liiqd8cfyl045s07yr"; depends=[fields geosphere maptools raster rgdal rgeos sp spatstat]; }; ConSpline = derive2 { name="ConSpline"; version="1.1"; sha256="0ap3qxqdby9rf665vh40m6f4wjz7q3cz8i4abw1ccryjlwjv1kzp"; depends=[coneproj]; }; Conake = derive2 { name="Conake"; version="1.0"; sha256="1rj1rv8r53516jqhwp9xqqwjxh4gx1w47c0bw59f87wiy5pbchpf"; depends=[]; }; CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; + Conigrave = derive2 { name="Conigrave"; version="0.1.0"; sha256="173panb3pz09fikzx3p0yjszizzi4sjl4pzrcw73ywvzkksg55kr"; depends=[ggplot2 miceadds mitools]; }; ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; - ConnMatTools = derive2 { name="ConnMatTools"; version="0.1.5"; sha256="02cv2rlfp9shwqc9nwb8278akmwv7yvviwl23jglzsyh721dpqkr"; depends=[]; }; + ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.3"; sha256="0zsn3al3di0fd9hkqljpqqy4zbmh97xr6cdi4fzv80ax81fjfqyk"; depends=[]; }; ConsRank = derive2 { name="ConsRank"; version="1.0.2"; sha256="11pdccndmiz4vm15kaidzwy92vi2aqi5klwxag4p2xk1xivnlm0n"; depends=[gtools MASS proxy rgl]; }; - ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.0"; sha256="13j4d5l0if9qrdqcx0mn529bygilym9gya3ih66p8bki6bmda72v"; depends=[mclust mixture mnormt]; }; + ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.1"; sha256="04i8n8fmf2qs08dmlfls9j2509aqzb665qaz97na0wanbldxidbr"; depends=[caret mclust mixture mnormt mvtnorm]; }; ConvCalendar = derive2 { name="ConvCalendar"; version="1.2"; sha256="0yq9a42gw3pxxwvpbj6zz5a5zl7g5vkswq3mjjv5r28zwa3v05vc"; depends=[]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.1"; sha256="0878fz33jxh5cf72lv0lga48wq2hqa4wz6m59111k59pzrsli344"; depends=[lattice tkrplot]; }; - Copula_Markov = derive2 { name="Copula.Markov"; version="1.0"; sha256="028rmpihyz9xr4r305lbcbb0y22jw1szmhw5iznv5zma507grbl3"; depends=[]; }; - CopulaDTA = derive2 { name="CopulaDTA"; version="0.0.2"; sha256="1k02r0i56fwwk155b7xy9dzxnmvnslzrcc90azixxhhc9rc1xsaq"; depends=[ggplot2 plyr reshape2 rstan]; }; - CopulaREMADA = derive2 { name="CopulaREMADA"; version="0.9"; sha256="0fhd4g8157rmkda5dygvnvb50f8dz31wlg1x432g9ra8fw7bdq01"; depends=[matlab statmod tensor]; }; + Copula_Markov = derive2 { name="Copula.Markov"; version="1.1"; sha256="0pgzrgd9bzf2qh9b7h0y4mmszlxk1wxdwlid3xh7rk7pif3mw3qd"; depends=[]; }; + CopulaDTA = derive2 { name="CopulaDTA"; version="0.0.4"; sha256="087kyq6bmnv12cg1il2hb9x1wbac5a85khf8mgvcvy4f1f8hhckr"; depends=[ggplot2 plyr reshape2 rstan]; }; + CopulaREMADA = derive2 { name="CopulaREMADA"; version="1.0"; sha256="021x40l5p6ip5br3qnca6nywkx9fpmgx5jm8i2dngj6yz6rc3hag"; depends=[matlab statmod tensor]; }; CopulaRegression = derive2 { name="CopulaRegression"; version="0.1-5"; sha256="0dd1n7b23yww36718khi6a5kgy8qjpkrh0k433c265653mf1siq8"; depends=[MASS VineCopula]; }; - CopyDetect = derive2 { name="CopyDetect"; version="1.1"; sha256="0h9bf7ay5yr6dwk7q28b6xxfzy6smljkq6qwjkzfscy5hnmwxkpa"; depends=[irtoys]; }; + CopyDetect = derive2 { name="CopyDetect"; version="1.2"; sha256="1sahrlg1gk1q8ciq0a8hxrlyci5i8jxz8pjpy04alckxdrxfpqbi"; depends=[irtoys]; }; CopyNumber450kCancer = derive2 { name="CopyNumber450kCancer"; version="1.0.4"; sha256="0csmrv5n4lxd19q8q94sxs374lkqilp5x2dj8nxzs0x1v8hn0knm"; depends=[]; }; - CorReg = derive2 { name="CorReg"; version="1.1.1"; sha256="1g12yrwx5j3db1j9q0j24z3q2j8a7m7ddkj9a4yznzzvjjdz2k0n"; depends=[corrplot elasticnet glmnet lars MASS Matrix mclust mvtnorm Rcpp RcppEigen Rmixmod rpart]; }; + CorReg = derive2 { name="CorReg"; version="1.1.9"; sha256="0x5bcqyi03pxsajjbsq3hwp1d4f1b8150n1z0wsdnv1jyg1rc9d7"; depends=[corrplot elasticnet glmnet lars MASS Matrix mclust mvtnorm Rcpp RcppEigen Rmixmod rpart]; }; + Corbi = derive2 { name="Corbi"; version="0.4-1"; sha256="01xspwzgic7yfmnp6l8w33mjnyr8lvajzp6wvwpgq3ffhli5hrf0"; depends=[CRF Matrix mpmi]; }; CorrBin = derive2 { name="CorrBin"; version="1.5"; sha256="1kg8kms76z127j2vmf7v162n0sh2jqylw4i7c35x5sig4q22m9gy"; depends=[boot combinat dirmult geepack mvtnorm]; }; - CorrMixed = derive2 { name="CorrMixed"; version="0.1-12"; sha256="10wcg2rn4dcx87wv6h51rk31gdh7pc0bbgmdi1qvwd08nlqc3zsy"; depends=[nlme psych]; }; + CorrMixed = derive2 { name="CorrMixed"; version="0.1-13"; sha256="02zg5kmv5qxnasnz872r3z7x7dmdcniq1x5xyfnnb3niwkdjgxzx"; depends=[nlme psych]; }; + CorrToolBox = derive2 { name="CorrToolBox"; version="1.3"; sha256="0q6w3avlpdr35aigc2a03wzi36z5k3c7hacbarjpfv9lig3c35wc"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; + CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.14"; sha256="1if4qb1d6mg3435pk3znln8id8fj12n3j9sjv4zn104v2fr90mhr"; depends=[caTools digest xcms XML]; }; Correlplot = derive2 { name="Correlplot"; version="1.0-2"; sha256="0prxnbi7ga5d23i0i4qpynfb3zrsgjxam47km6nsj1prakdkrq7w"; depends=[calibrate xtable]; }; + CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; CosmoPhotoz = derive2 { name="CosmoPhotoz"; version="0.1"; sha256="04girid6wvgyrk8ha81mdqjx2mmzifz57l1hzcgrdnzmjmm3vlmp"; depends=[arm COUNT ggplot2 ggthemes gridExtra mvtnorm pcaPP shiny]; }; + Counterfactual = derive2 { name="Counterfactual"; version="1.0"; sha256="18ngh1p2lm16wb4sxpah0xfbsnpq0i03mkaxsia51lqwkfg57vdv"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; + Countr = derive2 { name="Countr"; version="3.2.8"; sha256="0nx0xavpm3kkh6q9q4snqjs3dmp45b9dm2zqwg7lkrv0f32inkyp"; depends=[boot car flexsurv Formula MASS Matrix numDeriv optimx Rcpp RcppArmadillo VGAM]; }; CountsEPPM = derive2 { name="CountsEPPM"; version="2.1"; sha256="1w1l4kbk8c2prq7f38maz0fc44j9za6cmj0vydmcgscb9s6f3mg7"; depends=[expm Formula numDeriv]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; + CovSelHigh = derive2 { name="CovSelHigh"; version="1.0.0"; sha256="186ji8qvjvm41i85qa2324rs59wvjb4gsjllza5d7db08gqia66z"; depends=[bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest xtable]; }; CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; CoxRidge = derive2 { name="CoxRidge"; version="0.9.2"; sha256="0p65mg4hzdgks03k1lj90yj6qbk50s94rwvcwzkb5xxxwrijd10r"; depends=[survival]; }; Coxnet = derive2 { name="Coxnet"; version="0.2"; sha256="023l1fcs0g5qqlslqfwb51nkmcqa0d5qp9bibhndd8gq7raz6ws6"; depends=[Matrix Rcpp RcppEigen]; }; CpGFilter = derive2 { name="CpGFilter"; version="1.0"; sha256="07426xlmx0ya3pi1y5c24zr58wr024m38y036h9gz26pw7bpawy2"; depends=[]; }; CpGassoc = derive2 { name="CpGassoc"; version="2.55"; sha256="0vnksx66z8rfm5s5hn49p9ps26jwn6w2216bqw2k9xv77rr68phn"; depends=[nlme]; }; - Cprob = derive2 { name="Cprob"; version="1.2.4"; sha256="0zird0l0kx2amrp4qjvlagw55pk9jrx0536gq7bvajj8avyvyykr"; depends=[geepack lattice lgtdl prodlim tpr]; }; + Cprob = derive2 { name="Cprob"; version="1.3"; sha256="1hahvkmniahhar47nha96vcj810895wgvvg9si112hnv3sjaql3r"; depends=[geepack lattice lgtdl prodlim tpr]; }; CreditMetrics = derive2 { name="CreditMetrics"; version="0.0-2"; sha256="16g3xw8r6axqwqv2f0bbqmwicgyx7nwzff59dz967iqna1wh3spi"; depends=[]; }; - Crossover = derive2 { name="Crossover"; version="0.1-15"; sha256="1g9z4ssqyb3silaprcsjsdd1bk5rsih2hvqr6rm1qb8ayqjr1sp3"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; + CrossClustering = derive2 { name="CrossClustering"; version="3.0"; sha256="0l9cdniqf63x4pfkf6y7c2qh056jwadqw45nz9jk78wamqq8hyqv"; depends=[cluster]; }; + CrossVA = derive2 { name="CrossVA"; version="0.9.0"; sha256="0q5fc2maxq70s6h6dmj6amn6xzrjn6rzcsnq0cqrah2c8b6y351y"; depends=[lubridate]; }; + Crossover = derive2 { name="Crossover"; version="0.1-16"; sha256="19697wy066apkxrm99s7vflc0ih6zxxmyvj7x3dzh2icnv1gg1bb"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; CryptRndTest = derive2 { name="CryptRndTest"; version="1.2.2"; sha256="1cg0agwqp1f7pgxdf9wilwparklyfsv900r47fpihnqw3ycvbdai"; depends=[gmp kSamples LambertW MissMech Rmpfr sfsmisc tseries]; }; CrypticIBDcheck = derive2 { name="CrypticIBDcheck"; version="0.3-1"; sha256="1lrpwgvsif1wnp19agh8fs3nhlb7prr3hhqg28fi4ikdd1l2j3r4"; depends=[car chopsticks ellipse rJPSGCS]; }; - Cubist = derive2 { name="Cubist"; version="0.0.18"; sha256="176k9l7vrxamahvw346aysj19j7il9a2v6ka6dzmk0qq7hf3w9ka"; depends=[lattice reshape2]; }; + CuCubes = derive2 { name="CuCubes"; version="0.1.0"; sha256="1cpazar85rp8xfjvy0vxivr61grzvxz7a9mirxvhynln964by6ns"; depends=[]; }; + Cubist = derive2 { name="Cubist"; version="0.0.19"; sha256="1bjajcr2qnmqy8cakgiy4q07nj9dygz15a9jry5sa4nbkabpj4qh"; depends=[lattice reshape2]; }; + Cyclops = derive2 { name="Cyclops"; version="1.2.2"; sha256="1ly8rmfssjbi04b0k200iqh0gv3zr53x9vhj6hnrg1n3dqw0smn5"; depends=[BH bit ff ffbase Matrix Rcpp RcppEigen RcppParallel]; }; + CytobankAPI = derive2 { name="CytobankAPI"; version="1.0.0"; sha256="1hkd9chpn78hwjbyv1c9pa03fh3p3bj2axilibz8pyxd2vfqdk3y"; depends=[httr jsonlite]; }; D2C = derive2 { name="D2C"; version="1.2.1"; sha256="0qhq27978id0plyz9mgdi0r1sr3ixnvqm8w6hp5c2wjd1yhhh12s"; depends=[corpcor foreach gRbase lazy MASS randomForest RBGL Rgraphviz]; }; - D3M = derive2 { name="D3M"; version="0.41"; sha256="12yny4a6rggaz5zfjpacsmxcj805nbkw19n26m9vr58a7zg1iwa1"; depends=[beanplot Rcpp]; }; + D3M = derive2 { name="D3M"; version="0.41.1"; sha256="1qr50xq5zccb16a1rgzfbb9bz8bbnxxb522nb8ga159nmb4cwjmp"; depends=[beanplot Rcpp]; }; + D3partitionR = derive2 { name="D3partitionR"; version="0.3.1"; sha256="09172g1xz9j746y22wj7vx759a3wnv6skqqzfazl753ms07zrwdc"; depends=[htmlwidgets]; }; DAAG = derive2 { name="DAAG"; version="1.22"; sha256="16xp4qk09v9jwm4cs7b4mpn0kgl1va9rw86viwcjc54vjc32953f"; depends=[lattice latticeExtra]; }; - DAAGbio = derive2 { name="DAAGbio"; version="0.62"; sha256="18m4vq8vv0yi79na62nrm0cy1nlk7bg0xbddzxv5gpkmzi1i6m9s"; depends=[limma]; }; + DAAGbio = derive2 { name="DAAGbio"; version="0.63-1"; sha256="0f904cpyq140fbsxfqrm3wg41bncf6h2rkxfd37ij5m0qp067f0w"; depends=[limma]; }; DAAGxtras = derive2 { name="DAAGxtras"; version="0.8-4"; sha256="18lg13mbyharidj5j7ncx8s7d72v2hcnqr00vilhf3djk2mjq7xn"; depends=[]; }; DAGGER = derive2 { name="DAGGER"; version="1.4"; sha256="0b2hzv001xhch7pqgb53lfpdcjwg5lj33i6pb884l1kx92svjfr7"; depends=[Matrix quadprog Rglpk]; }; - DAISIE = derive2 { name="DAISIE"; version="1.0.2"; sha256="1w5pdsfcalr86k1gj6qz9qdgx82n5lxcjdzvyf854prxaq5a5z0m"; depends=[deSolve]; }; - DAKS = derive2 { name="DAKS"; version="2.1-2"; sha256="1817s7xd4h2zzaagmnw423qaxpa5fmxi3fh4h9hm2ra9w7nh6ljj"; depends=[relations sets]; }; - DALY = derive2 { name="DALY"; version="1.4.0"; sha256="1gx4q24149q1ipsrinswrm37z1nf4swgq188zsc1xifmw9l28v11"; depends=[]; }; + DAISIE = derive2 { name="DAISIE"; version="1.2"; sha256="0570q8bs2464516ink56a1ir4p5chdwnj1vygywn9lgc7n4dricd"; depends=[DDD deSolve subplex]; }; + DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; + DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="1.1"; sha256="07z8mynhqnk1zcvm84w09xzkiy2dfxwhmnpi6gaddr3p0waql4gj"; depends=[ape caper deSolve expm geiger matrixStats picante]; }; - DAMisc = derive2 { name="DAMisc"; version="1.3"; sha256="0d6fkg0c5a2jx1khv013lmahx5clyzab9w2dsi5zwxnf0jz5m8fc"; depends=[car effects gdata lattice MASS nnet pscl sm xtable]; }; + DAMisc = derive2 { name="DAMisc"; version="1.4-3"; sha256="1hic53vi7mj4fvggxjl4d3j4zw8wwczh6pldyi8idrhm45hw2nh4"; depends=[boot car effects gdata lattice MASS nnet pscl QRM sm VGAM xtable]; }; DATforDCEMRI = derive2 { name="DATforDCEMRI"; version="0.55"; sha256="0v26a1gi8l21ga5nqcnyfaa7gc8zxq6wk95b96ajgpdybb0l9s53"; depends=[akima lattice locfit matlab R_methodsS3 R_oo xtable]; }; + DBEST = derive2 { name="DBEST"; version="1.4"; sha256="1p25ddnn1r7lcqm077kxq0l5kv5104gnj0q9xf3yjyzgm4vsrfrn"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; - DBI = derive2 { name="DBI"; version="0.3.1"; sha256="0xj5baxwnhl23rd5nskhjvranrwrc68f3xlyrklglipi41bm69hw"; depends=[]; }; + DBI = derive2 { name="DBI"; version="0.5-1"; sha256="1idwm9lkmz6ns6h0vvgml18mg0k7vjqiv9p5svrdcmx7r1rirpdi"; depends=[]; }; + DBItest = derive2 { name="DBItest"; version="1.4"; sha256="04d1q04lmmxnaapdalj61k2k4p06vpff0fzr91fa5a2mvaxl6272"; depends=[DBI R6 testthat withr]; }; DBKGrad = derive2 { name="DBKGrad"; version="1.6"; sha256="0207zx0v1x3zhfbs0h1ssxc1b683k111f90k8ybhknb147104knr"; depends=[lattice minpack_lm SDD TSA]; }; + DCG = derive2 { name="DCG"; version="0.9.2"; sha256="1s2dz0vnhdhq23fqds1m2jspaz8k5zvd76z1zlbi6nb5ja5n3j3w"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; + DCM = derive2 { name="DCM"; version="0.1.1"; sha256="191gwfv30hdr789jmdrimcc7aqisz635anydsw2v4s28a3zjbipw"; depends=[gWidgets pander readxl]; }; DCODE = derive2 { name="DCODE"; version="1.0"; sha256="19dwms88q0ylxd92l3ivig8p8jjyhk8mhgz0l36m9pcq11gyjc0n"; depends=[seqinr]; }; - DCchoice = derive2 { name="DCchoice"; version="0.0.14"; sha256="0w2s4wqla39g8dbvnq01lmxl2zfg4znl37z8if6y00clynlnphxs"; depends=[Formula interval MASS]; }; + DCchoice = derive2 { name="DCchoice"; version="0.0.15"; sha256="1qdqn45ipq0806r25ri4aygzq48k8j5k8rlhi1cafym421yq6bfg"; depends=[Formula interval MASS]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; - DDD = derive2 { name="DDD"; version="3.2"; sha256="1d1va8qpzii5538zg9j5kf7i3hh90a2gdndhj35qvdgldwqj4rhh"; depends=[ade4 ape deSolve expoRkit Matrix phytools SparseM subplex]; }; - DDHFm = derive2 { name="DDHFm"; version="1.1.1"; sha256="03zs2zbrhjcb321baghva7b8y61c8p9z6bfj2vg9cvadpb0260nk"; depends=[]; }; + DClusterm = derive2 { name="DClusterm"; version="0.1"; sha256="0xkl4677vqy4sdkm0fczscqszjxk1kfmlbzdgm88shcnjzjg71d8"; depends=[DCluster gridExtra latticeExtra lme4 pscl RColorBrewer sp spacetime xts]; }; + DDD = derive2 { name="DDD"; version="3.3"; sha256="1rjk35gz8zq0xprzag9nzfs569pm7nhl7bfrvcnapigd2h7gw612"; depends=[ade4 ape deSolve expoRkit Matrix phytools SparseM subplex]; }; + DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; }; DDIwR = derive2 { name="DDIwR"; version="0.2-0"; sha256="0dqbldl5c6b8i5q3yk0hwd12lp8z9j4ilnmsqrkj69fv7mys9q3k"; depends=[foreign XML]; }; - DDRTree = derive2 { name="DDRTree"; version="0.1.3"; sha256="08h89pm1n8c8yvkm5qx2aqhz3c3x1ljy551gsq5waxjvmq06k8fy"; depends=[BH irlba Rcpp RcppEigen]; }; + DDRTree = derive2 { name="DDRTree"; version="0.1.4"; sha256="02z4j777yxqp09gxwzmn6x5fjz4rbsp1lh4qj20vgdjp8wcn3pn0"; depends=[BH irlba Rcpp RcppEigen]; }; DECIDE = derive2 { name="DECIDE"; version="1.2"; sha256="18kn2pm9r0ims2k1jfsfzh258wwxz0xg86rsbwgq6szh0azlq3qy"; depends=[]; }; DEEPR = derive2 { name="DEEPR"; version="0.1"; sha256="0q8970q3gpjxwxdf2bkhpnqrxpm00w27b20a9sn9vv314rn1n7s8"; depends=[dirmult]; }; DEMEtics = derive2 { name="DEMEtics"; version="0.8-7"; sha256="1s59qim60d4gp5rxjacdbmxdbpdm7cy9samn088w8fs0q232vjjx"; depends=[]; }; DEMOVA = derive2 { name="DEMOVA"; version="1.0"; sha256="09dqhhhihphhdnplmhdq4q5zwc0qvqhirdrxa9x6fr43vwa5zfp4"; depends=[leaps]; }; - DESP = derive2 { name="DESP"; version="0.1-6"; sha256="0gzhzchliwsjynsj9jrwrxdg5is3ph0inibfips7526ry1bfj93x"; depends=[graph MASS Matrix RBGL SparseM]; }; + DESP = derive2 { name="DESP"; version="0.2-2"; sha256="1s5x6x36ra83izcyrgdzc26a02cbbgy3xxn32sl30z6srys1j3j3"; depends=[graph MASS Matrix RBGL SparseM]; }; DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; - DEoptim = derive2 { name="DEoptim"; version="2.2-3"; sha256="0pcs7kkhad139c3nhmg7bkac1av4siknfg59lpknwwrsxbz208dg"; depends=[]; }; - DEoptimR = derive2 { name="DEoptimR"; version="1.0-4"; sha256="1cmyni2a4hfgfx0jfdxrkjlmhqb8rksk0vwnxsaz13k95pc473cv"; depends=[]; }; - DFIT = derive2 { name="DFIT"; version="1.0-2"; sha256="1kn3av6pnkmf9703yp3cn0zbdzjzxrlm6nbbcg7lwv9550jw2c4n"; depends=[ggplot2 mvtnorm simex]; }; - DIFboost = derive2 { name="DIFboost"; version="0.1"; sha256="1wms7k1h09an46zi0sx2qi83zhzhqc864abnxn5iybv5g72xj89k"; depends=[mboost penalized stabs]; }; - DIFlasso = derive2 { name="DIFlasso"; version="1.0-1"; sha256="048d5x9nzksphsdk9lwfagl165bb40r0pvjq2ihvhqvxspgpar4b"; depends=[grplasso miscTools penalized]; }; - DIFtree = derive2 { name="DIFtree"; version="2.0.1"; sha256="0mm9v1sg6n0mdrplnpxflhzg5diksdns3wd8h24drzb8ww9mvfri"; depends=[penalized plotrix]; }; + DEoptim = derive2 { name="DEoptim"; version="2.2-4"; sha256="10nlsvms5pf0wmn4z1lj6vnmpwr10q8nhdy5xy9rn7hd1627fm0a"; depends=[]; }; + DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; + DEploid = derive2 { name="DEploid"; version="0.3.2"; sha256="12yh9w6qlg3l9w9i7isic1g825d9r7qwwwf3d0x8j7prim37w5yr"; depends=[Rcpp]; }; + DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; + DGCA = derive2 { name="DGCA"; version="1.0.1"; sha256="1lqqzrsidkli4bk4jikq5f75jzqyzhv94n882yic5ndxgv26p9ic"; depends=[matrixStats WGCNA]; }; + DHARMa = derive2 { name="DHARMa"; version="0.1.3"; sha256="0kq8q13f3jdjczsc3vq8x6i85qydqk5jmm0yl8m6x6w2nva5glvg"; depends=[ape doParallel foreach gap lme4 lmtest MASS mgcv qrnn sfsmisc]; }; + DIFboost = derive2 { name="DIFboost"; version="0.2"; sha256="0wyjk870n18lq0dwhm9ndsh5vv0d8wkrbcky68w454vzrrw1q9h8"; depends=[mboost penalized stabs]; }; + DIFlasso = derive2 { name="DIFlasso"; version="1.0-2"; sha256="1900il14l2wvy5cjvmvg8z11q7ii311s18yif35561jilp2k9zfx"; depends=[grplasso miscTools penalized]; }; + DIFtree = derive2 { name="DIFtree"; version="2.1.4"; sha256="16cyd634jflaszpfq0ymwlbv57ci1iyffwai641jczn8cny504zl"; depends=[penalized plotrix]; }; DIME = derive2 { name="DIME"; version="1.2"; sha256="11l6mk6i3kqphrnq4iwk4b0ridbbpg2pr4pyqaqbsb06ng899xw0"; depends=[]; }; - DIRECT = derive2 { name="DIRECT"; version="1.0"; sha256="129bx45zmd6h7j6ilbzj2hjg4bcdc08dvm2igggi8ajndl1l5q9j"; depends=[]; }; - DJL = derive2 { name="DJL"; version="2.0"; sha256="06m7r6qvphzjkpp83ync3666p7rac5p81c3hqk5mhr9iykfzrh0f"; depends=[car combinat lpSolveAPI]; }; - DLMtool = derive2 { name="DLMtool"; version="3.1"; sha256="1ir04s2npgdy30550gbfccjv5jzsh54qm5g4pw97y24i6qag1qcq"; depends=[boot MASS snowfall]; }; + DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; + DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; + DJL = derive2 { name="DJL"; version="2.6"; sha256="1vvfh9hpanac2g22k4hqy3y7j3mn34mvasw0rx3y4vjbv3h05yw6"; depends=[car lpSolveAPI]; }; + DLASSO = derive2 { name="DLASSO"; version="1.0.0"; sha256="1rnm9f31d021yk2rhk7zcp2l9zbyxhpvdx32q6jjjjsiignjzc60"; depends=[MASS]; }; + DLMtool = derive2 { name="DLMtool"; version="3.2.2"; sha256="13qpv6k3dn793kykxi9bmj2bl893lql7zsyfp6s3r7wp29k3kjj1"; depends=[abind boot MASS Rcpp readxl snowfall]; }; DMR = derive2 { name="DMR"; version="2.0"; sha256="1kal3bvhwqs00b6p6kl0ja35pcz9v9y569148qfhy94m319fcpzm"; depends=[magic]; }; + DMRMark = derive2 { name="DMRMark"; version="1.0"; sha256="09bw1iyyc4hqy6cjbci736zh0qzdfzk1s90in93f7s967d73mj8w"; depends=[ellipse MCMCpack mvtnorm]; }; DMwR = derive2 { name="DMwR"; version="0.4.1"; sha256="1qrykl9zdvgm4c801iix5rxmhk9vbwnrq9cnc58ms5jf34hnmbcf"; depends=[abind class lattice quantmod ROCR rpart xts zoo]; }; + DMwR2 = derive2 { name="DMwR2"; version="0.0.2"; sha256="1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9"; depends=[class DBI dplyr quantmod readr rpart xts zoo]; }; DNAprofiles = derive2 { name="DNAprofiles"; version="0.3.1"; sha256="0chsndrmanb2swmhfan9iz1bzz3jsvk24n7j9fnjxibckmn2fdpv"; depends=[bit Rcpp RcppProgress]; }; - DNAtools = derive2 { name="DNAtools"; version="0.1-21"; sha256="1ncx2rmxb0ip804x6xznfv8brjpp518fhnm1653mlrsl3hpzrh88"; depends=[multicool Rcpp Rsolnp]; }; + DNAseqtest = derive2 { name="DNAseqtest"; version="1.0"; sha256="1mpmf40vrpw8m75rlqchsnyrz12pgg5bkz7wfca5yy5sbbiwk5pf"; depends=[]; }; + DNAtools = derive2 { name="DNAtools"; version="0.1-22"; sha256="1kkqbzwbivd78lpphsn9xqdxqc46ng6f86nqns18gq0s2g8gvys1"; depends=[multicool Rcpp Rsolnp]; }; + DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; }; DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; }; - DOBAD = derive2 { name="DOBAD"; version="1.0.4"; sha256="1hslwgs4q05xm29my5cq6g3vvjc0arvdmlx734wardj9dy29p1v5"; depends=[lattice numDeriv]; }; + DOBAD = derive2 { name="DOBAD"; version="1.0.5"; sha256="0nvjs4vsbl1db4g0yyrqyllawhvrzv1lgs6gmn49iqvajxyrpnvi"; depends=[lattice numDeriv]; }; + DODR = derive2 { name="DODR"; version="0.99.2"; sha256="16ia9j8vab8n2i6a17wz8nfvkfgj2gsyhxvwgxvjg2cz99hsbhdj"; depends=[Matrix npsm Rfit]; }; + DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; DOvalidation = derive2 { name="DOvalidation"; version="0.1.0"; sha256="0vm4sxbchkj2hk91xnzj6lpj05jg2zcinlbcamy0x1lrbjffn9zk"; depends=[]; }; + DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; DPpackage = derive2 { name="DPpackage"; version="1.1-6"; sha256="01qdl6cp6wkddl9fwwpxwvyhb7lpjxis6wnbm2s288y2n9wi4j24"; depends=[MASS nlme survival]; }; + DREGAR = derive2 { name="DREGAR"; version="0.1.0.0"; sha256="07n5iq0yv9f09wibbkamyz2x1b6sp4v0mzasfmllzlzqsr6s50gz"; depends=[msgps]; }; DRIP = derive2 { name="DRIP"; version="1.1"; sha256="050xfq30fp9m03ig938bci2haiglj6jj4k327fpz7r2y78cgcnn4"; depends=[caTools readbitmap]; }; + DRR = derive2 { name="DRR"; version="0.0.2"; sha256="1scfwp6ry6apxzqjclsmn2frxp9qfw6zxsxn5w0j0q3sz42hz1h2"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; }; DSL = derive2 { name="DSL"; version="0.1-6"; sha256="0fmqxladifqqcs4mpb8a1az74fyb4gb8l2y5gzqaad3dbiz82qih"; depends=[]; }; DSpat = derive2 { name="DSpat"; version="0.1.6"; sha256="1v6dahrp8q7fx0yrwgh6lk3ll2l8lzy146r28vkhz08ab8hiw431"; depends=[mgcv RandomFields rgeos sp spatstat]; }; - DSsim = derive2 { name="DSsim"; version="1.0.4"; sha256="0mdz8m0s03cj4br8w7h493vaks37lr2qg7zjmf03qpnjdppnbnmb"; depends=[mgcv mrds shapefiles splancs]; }; + DSsim = derive2 { name="DSsim"; version="1.1.1"; sha256="1av7dvzqarap1b21cq4mhv494yh1wdxa2vi5gkvb1f9mhlx0v70c"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.1"; sha256="0mj7iiy1gglw7kixybmb7kr1bcl5r006zcb3klkw7p6vvvzdm6qj"; depends=[htmltools htmlwidgets magrittr]; }; + DT = derive2 { name="DT"; version="0.2"; sha256="1g86p0jcjqi2ph5rhm45jkzibsa6yfcj8n5cg3giy90sqgjzkdx1"; depends=[htmltools htmlwidgets magrittr]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; DTMCPack = derive2 { name="DTMCPack"; version="0.1-2"; sha256="0bibas5cf06qq834x9q2l2fyh6q9wrg07k8cn6almcyirzax6811"; depends=[]; }; + DTR = derive2 { name="DTR"; version="1.7"; sha256="1lzvk9ar6xf3n2vvy8vb9mvrbx3nafzzhvz5g7vf79jd71yz54jd"; depends=[aod ggplot2 survival]; }; DTRlearn = derive2 { name="DTRlearn"; version="1.2"; sha256="1dakwlafs27nkjsiknnwxnb2hgc2xdpi5mb6dmzpjig7hg2f8d3f"; depends=[ggplot2 glmnet kernlab MASS]; }; - DTRreg = derive2 { name="DTRreg"; version="1.0"; sha256="0ry6n9hl5j1s4j8n9zqvh87qbm4vm8hvix61js1zfys42hnv10af"; depends=[]; }; - DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.5"; sha256="0b8wv1vz1xr7czcnva9lg69gpsryx6n1g0s901vxdriycacmyhqg"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; }; - DWreg = derive2 { name="DWreg"; version="1.0"; sha256="0nws1gr5w7rwl4agkmz98y5ljmbipwryg81kc8mn1y8ppnpx02m0"; depends=[DiscreteWeibull Ecdat maxLik]; }; + DTRreg = derive2 { name="DTRreg"; version="1.1"; sha256="113m1zhhfyjxl1b0ibjamfcpfii3sp32im4mj8lk2ql2mqw7j9yd"; depends=[]; }; + DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.6"; sha256="0r3wjkr6grrh4nybrg0rs9ialrppjsdjshb47m0knn48vi0iwm77"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; }; + DWreg = derive2 { name="DWreg"; version="2.0"; sha256="0bgahzgcxz86n0ady97l48zyahv3p2iyc2ivbij1xrfx3wcx3b5n"; depends=[DiscreteWeibull Ecdat maxLik survival]; }; DYM = derive2 { name="DYM"; version="0.2"; sha256="1rk0xs224xi68f0mrygny2rklggl4grk866q7y9xck38bwy7aw94"; depends=[]; }; Daim = derive2 { name="Daim"; version="1.1.0"; sha256="19s0p3a4db89i169n2jz7lf8r7pdmrksw7m3cp9n275b5h8yjimx"; depends=[rms]; }; - Dark = derive2 { name="Dark"; version="0.9.4"; sha256="0paw34zhbi8k6pjgykxxqhpjgl8qr340dv091r9931q4mm215j2n"; depends=[]; }; + DamiaNN = derive2 { name="DamiaNN"; version="1.0.0"; sha256="09viy1lilz0b29s3myky03981bfnhxjxxgfhdah33cn5x682rbp4"; depends=[caret testthat]; }; + DandEFA = derive2 { name="DandEFA"; version="1.6"; sha256="1ir1z76c8742vqdlwv35l4rhr0x7lhghz24g35zn7b30671lypf8"; depends=[gplots polycor]; }; + Dark = derive2 { name="Dark"; version="0.9.8"; sha256="1f01aq4g50f07005c8k91cfy9hvl3fmb4yl2924d7512m3884xlv"; depends=[]; }; DatABEL = derive2 { name="DatABEL"; version="0.9-6"; sha256="1w0w3gwacqrbqjdcngdp44d2gb16pq9grq2f8j2bhbxc4nkx12n1"; depends=[]; }; - DataCombine = derive2 { name="DataCombine"; version="0.2.19"; sha256="0y7rrpfv4c63cf3v68y9bnwcx450cj9v66k8a53x62d88096f5pb"; depends=[data_table dplyr]; }; - DataExplorer = derive2 { name="DataExplorer"; version="0.2.4"; sha256="0dz2lyn67cak9ada1ghy33zk72i9j4xbz9mjbf8xffwmsrmspi04"; depends=[data_table ggplot2 gridExtra reshape2 rmarkdown scales]; }; + DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; }; + DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; + DataExplorer = derive2 { name="DataExplorer"; version="0.4.0"; sha256="0yxx20wzdnsz924q7mh9sbbbby04vv5rybvyqbk2s78a8lqv7abw"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; - Davies = derive2 { name="Davies"; version="1.1-8"; sha256="1wp7ifbs4vqfrn4vwh09lc53yiagpww91m5mxmcr62mjbw8q7zhr"; depends=[]; }; - DecisionCurve = derive2 { name="DecisionCurve"; version="1.1"; sha256="18966kynlpagrxciks8bxy6s31qq6zxy4vw6y24fa1axg1gfbxd9"; depends=[caret MASS pander reshape]; }; + Datasmith = derive2 { name="Datasmith"; version="1.0-1"; sha256="1ba23b8a931pvml2dzw0zkm40akcl2lb6rps6bffrl7lvxiy35y1"; depends=[igraph lbfgs MASS Matrix nloptr truncnorm vegan]; }; + Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; + DeLorean = derive2 { name="DeLorean"; version="1.2.4"; sha256="1ja3kgw4rynsaaybq77axzp1m7sbqnv1pc7s9qsm1c7k6v3zjhfg"; depends=[broom coda dplyr fastICA functional ggplot2 kernlab MASS memoise Rcpp reshape2 rstan seriation stringr]; }; + DecisionCurve = derive2 { name="DecisionCurve"; version="1.3"; sha256="1sigxhm9d9k2kxap43kpnlb0r8iqphslb7wxcp44k1cdnk192311"; depends=[caret MASS pander reshape]; }; + DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; DeducerExtras = derive2 { name="DeducerExtras"; version="1.7"; sha256="0sngsq31469a74y7nhskl82fwy2i0ga68m9g6b1xyhxz1a8kgvlg"; depends=[Deducer irr rJava]; }; DeducerPlugInExample = derive2 { name="DeducerPlugInExample"; version="0.2-0"; sha256="03aw7wr957xzw920ybyzxnck5kx0q2xpcrpq8jh2afyzszy6hzbi"; depends=[Deducer]; }; @@ -532,97 +680,118 @@ in with self; { DeducerSpatial = derive2 { name="DeducerSpatial"; version="0.7"; sha256="0133qk3yjcifyha7c4pqr5s0hmbci72bzgil2r0sxjmrljs3q727"; depends=[Deducer Hmisc JavaGD maptools OpenStreetMap rgdal scales sp UScensus2010]; }; DeducerSurvival = derive2 { name="DeducerSurvival"; version="0.1-0"; sha256="03qk3y4pibvrxbnxbm5rlksw807dvbilip1jbpn1r7k02ibzq676"; depends=[Deducer]; }; DeducerText = derive2 { name="DeducerText"; version="0.1-2"; sha256="0if2p9j74wa5rva4iv0i8iax22grl9j7lqcqzqlywjgqwnlzxa05"; depends=[Deducer RColorBrewer SnowballC tm wordcloud]; }; - Delaporte = derive2 { name="Delaporte"; version="2.2-3"; sha256="0iw9y4582rf736jpllw3lc24cqa4q07q9432xdxp4cl5qwgkk40l"; depends=[Rcpp]; }; - Demerelate = derive2 { name="Demerelate"; version="0.8-1"; sha256="1qngwlzzpd2cmij5ldrmhcn12s9yxd0rargc5vzvkrwcqpkgylkn"; depends=[Formula fts mlogit sfsmisc vegan]; }; + Delaporte = derive2 { name="Delaporte"; version="4.0.3"; sha256="15zwfqvi4qvv7gp34nvsbx2zhp21b6f7dyyxb09hrvll0bczxbaj"; depends=[]; }; + Demerelate = derive2 { name="Demerelate"; version="0.9-2"; sha256="00x0jjfzcq819pfrzs0jr5rvzpk4828q8kdb05icc79im1yq627v"; depends=[fts mlogit sfsmisc vegan]; }; DendSer = derive2 { name="DendSer"; version="1.0.1"; sha256="0id6pqx54zjg5bcc7qbxiigx3wyic771xn9n0hbm7yhybz6p3gz9"; depends=[gclus seriation]; }; + DengueRT = derive2 { name="DengueRT"; version="1.0.1"; sha256="11qfg4l6y3j8qh4dcsz13xjjj1n0q71c9a3c180nm5lgqv0nwb81"; depends=[drc ggplot2 nlme]; }; + DensParcorr = derive2 { name="DensParcorr"; version="1.0"; sha256="15w0ifcq1js0wyjscfhlbga77sgzqpmz7zmwa77y92iwna8q66ad"; depends=[clime gplots]; }; Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; DepthProc = derive2 { name="DepthProc"; version="1.0.7"; sha256="1vnx9lhcrzsyygpq1rii4crxrz4c4vs60dnw0ha0y3j1mh0yxc2k"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm]; }; - Deriv = derive2 { name="Deriv"; version="3.6.1"; sha256="06m0c0fxsn7yaw0z8l9bgcr6smw690wbvnk23iikkkshygp6jhrd"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.16"; sha256="1k7r6vfcpgz93qpyqbczl40zb194nzhh3l4kng4fzpqr56wp3s7w"; depends=[BH boot foreign manipulate mvtnorm Rcpp]; }; + Deriv = derive2 { name="Deriv"; version="3.8.0"; sha256="0a5kf5bb46wszq76wc7jasd4g2clmrvs86mrz14hngmhpmlcy7gp"; depends=[]; }; + DescTools = derive2 { name="DescTools"; version="0.99.19"; sha256="086ivipgzpq8pwc7r9a0jpd6qswp6b034jn603fw9rxz8ygz7rvj"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.5"; sha256="02b6yjgklsdjh3rikc8f5wfx08ymbygr3fyq1c134xhffhykrlgp"; depends=[GGally ggplot2 plyr reshape2 scales]; }; - DetMCD = derive2 { name="DetMCD"; version="0.0.3"; sha256="1rxc6d1m5i6a73cxf66kpk687b7dwk8bhji97vbzrz19r8hwqq2b"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; + DetMCD = derive2 { name="DetMCD"; version="0.0.4"; sha256="0jdwwx15k8g3f5izcswsj28nfdw3n50x710mc938031yn7hjmkhg"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.4"; sha256="0kvmbh7cdy3hmds1znahy1lqhd68y21kmmcki9xbq1b76n4h812n"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; DetSel = derive2 { name="DetSel"; version="1.0.2"; sha256="0igkccclmjwzk7sl414zlhiykym0qwaz5p76wf4i7yrpjgk7mhl9"; depends=[ash]; }; Devore7 = derive2 { name="Devore7"; version="0.7.6"; sha256="1m18p8h9vv4v0aq2fkjyj39vzb8a09azbbczhfiv4y88w540i8nw"; depends=[lattice MASS]; }; DiagTest3Grp = derive2 { name="DiagTest3Grp"; version="1.6"; sha256="04dxyyqv333rkjf2vlfpal59m7klhw6y7qilym6nw78qb1kqqys7"; depends=[car gplots KernSmooth]; }; - DiagrammeR = derive2 { name="DiagrammeR"; version="0.8.2"; sha256="0zjziph3xri9w277bi9b54n00mv7pmrygk155xzfcwvrix4g8868"; depends=[htmlwidgets rstudioapi scales stringr visNetwork]; }; + DiagrammeR = derive2 { name="DiagrammeR"; version="0.9.0"; sha256="09j6h733wm0b9k8l8va2fav6h5cxz6z07kwp29hfxgsjd97rchlg"; depends=[dplyr htmlwidgets igraph influenceR magrittr RColorBrewer rgexf rstudioapi scales stringr tibble viridis visNetwork]; }; DiagrammeRsvg = derive2 { name="DiagrammeRsvg"; version="0.1"; sha256="0j2cm1mx3zrb2k3pcrb96z2z3kws61gyyjsjjv5rqcb5lzdgi65k"; depends=[V8]; }; + DiallelAnalysisR = derive2 { name="DiallelAnalysisR"; version="0.1.1"; sha256="1diwzckn0f2dv0vj2mdzy7k3md6j472xzj82ip23adwr27vlfsi3"; depends=[ggplot2]; }; DiceDesign = derive2 { name="DiceDesign"; version="1.7"; sha256="05bmscy275077kmbmg75npnmw30kd5x5wmlizcfq771zixby3f7h"; depends=[]; }; DiceEval = derive2 { name="DiceEval"; version="1.4"; sha256="06p3v161ig714k7z59iji64xhxw1a68kqhnlwhwpjpyrx7kn137b"; depends=[DiceKriging]; }; DiceKriging = derive2 { name="DiceKriging"; version="1.5.5"; sha256="035kbk633v4kfb44wiyb556sayl73c24fc1w09r3f33shqgidzjm"; depends=[]; }; - DiceOptim = derive2 { name="DiceOptim"; version="1.5"; sha256="0ajqn5p7sl9rdj35wy45vmmzxl2d97jgz5wdq6ghdzxq523vfkz3"; depends=[DiceKriging lhs MASS mnormt rgenoud]; }; + DiceOptim = derive2 { name="DiceOptim"; version="2.0"; sha256="1hx4379yb6d36c494qc237vld4jnfxq18m994p5ii9ks6s7amifn"; depends=[DiceDesign DiceKriging mnormt pbivnorm randtoolbox rgenoud]; }; DiceView = derive2 { name="DiceView"; version="1.3-1"; sha256="0c7i1jy13d5bj822q1rp0d7gmmfjd00jaah34pnj8fzwyrq404z9"; depends=[DiceEval DiceKriging rgl]; }; + DidacticBoost = derive2 { name="DidacticBoost"; version="0.1.1"; sha256="0z1h61n6nfjvb64fgkzi1sq7ag747crhh593hxkx0cpza29778rz"; depends=[rpart]; }; DiffCorr = derive2 { name="DiffCorr"; version="0.4.1"; sha256="1kxp9dbiww086rmvmjvfhbk7jl36dkj88qwii6zg57llf7l5l4hm"; depends=[fdrtool igraph multtest pcaMethods]; }; - DiffusionRgqd = derive2 { name="DiffusionRgqd"; version="0.1.2"; sha256="19mzrsra290lapznlh9pvr4pzrapfa28pa10j8dyqnsfx3dc5r4c"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; - DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.0"; sha256="0nha6hq3fa04ymxk8hplgff7fnlrc7hx0iyws1nkgih4va6mx815"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; + DiffusionRgqd = derive2 { name="DiffusionRgqd"; version="0.1.3"; sha256="1gf5jpvimfrc9ccva0jk85rl4zfkbijm2305ky1rxcgm4kgw4lax"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; + DiffusionRimp = derive2 { name="DiffusionRimp"; version="0.1.2"; sha256="1h7145ldlgwrrwj4l1wxdp2rbg2pm4v3pngiq0saz0xi3vpcxwl6"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; + DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; Digiroo2 = derive2 { name="Digiroo2"; version="0.6"; sha256="1b1ahhqz5largjadlk5n6nw2183c05k28mksb1wm26y0lps0vdgr"; depends=[maptools spatstat spdep]; }; - Directional = derive2 { name="Directional"; version="1.8"; sha256="1q1fpzp83980lg04mq90kcffh3jjfp2jx3x4bc5bj6mclhpymxam"; depends=[abind doParallel fields foreach MASS]; }; + DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; }; + Directional = derive2 { name="Directional"; version="2.4"; sha256="1yrk0x4dydsx82415kv6a2asbd1d06ac7vyqi5j6rm4sa5cp6qmb"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3"; sha256="0qvnsbyn3livp5jrnxskf5sf7f2svy5mqkmnhzncb9bwf3kxpyla"; depends=[Formula maxLik rgl]; }; Disake = derive2 { name="Disake"; version="1.5"; sha256="1fw45fmnir6h34jw8917mhyz6cgzbq4ywyyf51qxhm68wgzy9h17"; depends=[]; }; DiscML = derive2 { name="DiscML"; version="1.0.1"; sha256="0qkh0yak1kmzxxx0cqb47zgrj8v2s1d5danpibwwg43j138sb73l"; depends=[ape]; }; - DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.1"; sha256="0w0s2fixpcmcwids35xx91hll9rf9qbi7155sp90dxd3vr8c939v"; depends=[Rsolnp]; }; - DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1"; sha256="1pcq4kggy1z88a0car53d0f69rx2qg7q104cr0bxi6yllrb3q0nr"; depends=[Rsolnp]; }; + DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; + DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; DiscreteWeibull = derive2 { name="DiscreteWeibull"; version="1.1"; sha256="1rg3ax6jryagf5d3h8m44x9wyhr2qff3srfa9zrk6i64p1ahk9lr"; depends=[Rsolnp]; }; DiscriMiner = derive2 { name="DiscriMiner"; version="0.1-29"; sha256="1ii8aa4dwfk991qdnpmkva20wvs5fqcna9030c799ybf11qpdass"; depends=[]; }; - DisimForMixed = derive2 { name="DisimForMixed"; version="0.1"; sha256="1kl6n1i7si0r2rabxcfd78971p3ykxkq3w66ra1flzjn8gs6li38"; depends=[cluster dplyr]; }; - Distance = derive2 { name="Distance"; version="0.9.4"; sha256="18iip9xny2vazpah96qziqwql4hnxg2m8hyjhh8b34w29jv0nsm5"; depends=[mrds]; }; + DisimForMixed = derive2 { name="DisimForMixed"; version="0.2"; sha256="00mknsalikangr17946877m5fy2jgkgasgl6ng4f2nr44f0q9l6q"; depends=[cluster dplyr]; }; + Distance = derive2 { name="Distance"; version="0.9.6"; sha256="165spw4hfyjpgfwg3z5wi69spfb1x3xzag4phwrqhsnp8wb4b619"; depends=[mrds]; }; DistatisR = derive2 { name="DistatisR"; version="1.0"; sha256="1il00v26q68h5dd5c9lm2jblgn8hs6n0457r13mlw6r7pcj0158j"; depends=[car prettyGraphs]; }; DistributionUtils = derive2 { name="DistributionUtils"; version="0.5-1"; sha256="0gw531wfrjx1sxh17qh48dwbxnibgr0viga07vsp8nay7l02jap9"; depends=[RUnit]; }; DivE = derive2 { name="DivE"; version="1.0"; sha256="1ixkk8kd3ri78ykq178izib0vwppnbiwbpc1139rcl8f5giiwcdh"; depends=[deSolve FME rgeos sp]; }; DivMelt = derive2 { name="DivMelt"; version="1.0.3"; sha256="03vkz8d283l3zgqg7bh5dg3bss27pxv4qih7zwspwyjk81nw3xmr"; depends=[glmnet]; }; - DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.2"; sha256="0cv0cw24x00gfy7hx97fz82j6smcmc9w9vsig00bb3ip3ba1d4y8"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; + DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.5"; sha256="009fy4c11w0p30jpd94vj020pnrzm8z2iwlhkdij1f14ifpamzv2"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; DiversitySampler = derive2 { name="DiversitySampler"; version="2.1"; sha256="1sfx7craykb82ncphvdj19mzc0kwzafhxlk9jcxkskygrlwsxfgg"; depends=[]; }; DnE = derive2 { name="DnE"; version="2.1.0"; sha256="02cbfb3m9xf24wkgqc06k3k0rx7qlqh4ma43khg6fpvif6yyahrn"; depends=[]; }; - DoE_base = derive2 { name="DoE.base"; version="0.28"; sha256="0w68gg1829dhfm4valw66ld4ccapygpcpds7j2mnmlq9g4l847ca"; depends=[combinat conf_design MASS vcd]; }; + DoE_base = derive2 { name="DoE.base"; version="0.29"; sha256="013p4y7imf6nb1mq7dx62c0nq5shf1yzdlfbri86icrdm00s63fd"; depends=[combinat conf_design lattice MASS vcd]; }; DoE_wrapper = derive2 { name="DoE.wrapper"; version="0.8-10"; sha256="12q3arfm76x9j8qnrmw07jh904qdqz59ga1zk8m3n17prr11vrgb"; depends=[AlgDesign DiceDesign DoE_base FrF2 lhs rsm]; }; + DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; Dodge = derive2 { name="Dodge"; version="0.8"; sha256="1vnvqb2qvl6c13s48pyfn1g6yfhc60ql3vn7yh2zymxcsr1gxgcw"; depends=[]; }; - Dominance = derive2 { name="Dominance"; version="1.0.0"; sha256="0xcmslzfdcy826vcnlybhdyym5kqkrdqidq6jn10s4jic7jk8nl3"; depends=[chron gdata igraph]; }; - DoseFinding = derive2 { name="DoseFinding"; version="0.9-14"; sha256="04f0v3vcw0p10ahi2cyqndfwjqgvmp8ghxc3nmikhw7prp9yimzn"; depends=[lattice mvtnorm]; }; + Dominance = derive2 { name="Dominance"; version="1.0.17"; sha256="07xsyadmq47szvp1vnf53ijq43pwd9g7554fgl803fhkwq6b3jgh"; depends=[chron gdata igraph XLConnect]; }; + DoseFinding = derive2 { name="DoseFinding"; version="0.9-15"; sha256="0sc3z62jn2jh6kjacqpf9vnpv0wzihcln24m5ipspmz0n1b0nvz7"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.0"; sha256="1pba9ypp0n3i2k3ji1x8j7h548pfam9z99hxylcjcxnnvc7xs2fw"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; }; - DrugClust = derive2 { name="DrugClust"; version="0.1"; sha256="1p3pxc1qxp26sxa52877dq1mf3nwx7vbvcr8d1i8ccmhmccayrdb"; depends=[cclust cluster e1071 MESS ROCR]; }; + DrBats = derive2 { name="DrBats"; version="0.1.4"; sha256="0jzl1jklxsbqf5hv3a71lckk51jxi1lnbk5zmvd4x3y9b9azl2cq"; depends=[ade4 coda MASS Matrix rstan sde]; }; + DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; + DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; + DstarM = derive2 { name="DstarM"; version="0.2.1"; sha256="166843l9v99rg59iz17qs2gb45qjkxfmg676hd0krg5mhq7xgk8b"; depends=[DEoptim ggplot2 rtdists RWiener]; }; DunnettTests = derive2 { name="DunnettTests"; version="2.0"; sha256="1sf0bdxays10n8jh2qy85fv7p593x58d4pas9dwlvvah0bddhggg"; depends=[mvtnorm]; }; + DySeq = derive2 { name="DySeq"; version="0.13"; sha256="0a1p2l4rpafpbggi3vshcd7xkkn1g5jy93hypgk9g7qskvhzyq0n"; depends=[MASS]; }; DynClust = derive2 { name="DynClust"; version="3.13"; sha256="020zl2yljp47r03rcbzrbdmwk482xx27awwzv4kdrbchbzwhxqgm"; depends=[]; }; - DynNom = derive2 { name="DynNom"; version="2.0"; sha256="1ckdx2cn5ylsks65ydlhjcqsvpdbm6hwm67snqn9zj4isqb017sf"; depends=[compare ggplot2 shiny stargazer survival]; }; + DynNom = derive2 { name="DynNom"; version="4.0"; sha256="16xsgm6nb8qdk5j0srh6w7jda807sh3m73p0sbvvb5h4rf8vdy06"; depends=[BBmisc compare ggplot2 rms shiny stargazer survival]; }; DynTxRegime = derive2 { name="DynTxRegime"; version="2.1"; sha256="0dxf16zpj6cyx7afbvr4w4d76w4vshbvvkkqla68dbav0yvy7z7i"; depends=[modelObj]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; + EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; EBMAforecast = derive2 { name="EBMAforecast"; version="0.52"; sha256="1809ia0dpkilprv7x19drp1v2qckk0wm596f1i1vl0k37wbhcziv"; depends=[abind Hmisc plyr Rcpp separationplot]; }; - EBS = derive2 { name="EBS"; version="3.0"; sha256="0nrqglbfr7wagd4xrk5jx0kficjgvk7wqwzqrbs589dkll24sn5b"; depends=[MASS]; }; + EBS = derive2 { name="EBS"; version="3.1"; sha256="0flj62lcshrcn5n4fmssgb2qdvg0l6r71rsn3h0clfjhbg96pqz5"; depends=[MASS]; }; EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; }; + EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECOSolveR = derive2 { name="ECOSolveR"; version="0.2"; sha256="1y9gl6gd8im7zhn5j4vhzk0ck620n4l9kwgxig2r27q6h652fqn9"; depends=[Matrix]; }; - ECctmc = derive2 { name="ECctmc"; version="0.1.0"; sha256="09m0hfiji488nkk5b6dbylk5a06a27gzrzaa81v8gfb5mp7vy890"; depends=[Rcpp RcppArmadillo]; }; + ECctmc = derive2 { name="ECctmc"; version="0.2.3"; sha256="1iplg647qs52007h4vx507s643h7knisravif3v6rfyp6fhfl7v2"; depends=[Rcpp RcppArmadillo]; }; + ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.5"; sha256="0ml623q679id989gbr9k52719blgbhfcsrzi9xaqzvwcg5qq9bi5"; depends=[jsonlite shiny]; }; EDFIR = derive2 { name="EDFIR"; version="1.0"; sha256="0nv1badyg1dri6z91fvs68a72g22vdg0rpi3fkpxw527r11fvrrv"; depends=[geometry lpSolve MASS vertexenum]; }; - EDISON = derive2 { name="EDISON"; version="1.1"; sha256="09xw4p4hwj8djq143wfdcqhr2mhwynj4ixj3ma7crhqidgal169p"; depends=[corpcor MASS]; }; - EDR = derive2 { name="EDR"; version="0.6-5.1"; sha256="10ldygd1ymc4s9gqhhnpipggsiv4rwbgajvdk4mykkg3zmz7cbpm"; depends=[]; }; - EEM = derive2 { name="EEM"; version="1.0.4"; sha256="15rs8bfpfz97q133fas21ghgyppw1rl526fs1dxmhn64bvzsr37j"; depends=[colorRamps R_utils readxl reshape2 sp]; }; + EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; }; + EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; }; + EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; + EFAutilities = derive2 { name="EFAutilities"; version="0.1.0"; sha256="1kbbhwvqj6c5n2nknjy7kfm4i0zhil5x8rsl1k4xh1zcvnlj22bs"; depends=[GPArotation mvtnorm]; }; EFDR = derive2 { name="EFDR"; version="0.1.1"; sha256="0jgznwrd40g9xmvhrd7b441g79x41ppfdn6vbsbzc0k5ym1wzb1p"; depends=[doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; - EGRET = derive2 { name="EGRET"; version="2.4.3"; sha256="07b68jk2jakacdcs4siy4smq4d5afjckq5xas1aqq42nzwqlfz65"; depends=[dataRetrieval fields lubridate survival]; }; - EGRETci = derive2 { name="EGRETci"; version="1.0.0"; sha256="1pz0l59hm7yy30p6albx3b4nm1qfbphj9jkz79a5mljk1fx8dbrz"; depends=[binom EGRET lubridate]; }; + EFS = derive2 { name="EFS"; version="1.0.1"; sha256="0zjspy4myxi1z16pbs515c8zylkbykdadsqkgdd9k0pr0mb7cnck"; depends=[party pROC randomForest ROCR]; }; + EGRET = derive2 { name="EGRET"; version="2.6.0"; sha256="0alr47pmq1ml64j500vkqwmvrqa3i1ccbf3w7w44fbbjy1vfp04a"; depends=[dataRetrieval fields lubridate survival truncnorm]; }; + EGRETci = derive2 { name="EGRETci"; version="1.0.2"; sha256="15jf4bgxvqqz64y4i6ncfj0ymgwmhahxlhdnfps4zj7gwxgcbvqh"; depends=[binom EGRET lubridate]; }; EIAdata = derive2 { name="EIAdata"; version="0.0.3"; sha256="12jgw3vi2fminwa4lszczdr4j4svn2k024462sgj1sn07a4a4z2s"; depends=[plyr XML xts zoo]; }; EILA = derive2 { name="EILA"; version="0.1-2"; sha256="0wxl9k4fa0f7jadw3lvn97iwy7n2d02m8wvm9slnhr2n8r8sx3hb"; depends=[class quantreg]; }; EL = derive2 { name="EL"; version="1.0"; sha256="13r7vjy2608h8jph8kwy69rnkg98b2v69117nrl728r3ayc46a18"; depends=[]; }; ELMR = derive2 { name="ELMR"; version="1.0"; sha256="0pd3drv485xbdyfwm28kjpd0nd0zv1khfwzki1gh5p1gz9ndwr2x"; depends=[]; }; - ELT = derive2 { name="ELT"; version="1.5"; sha256="1nrq3dmlgh793ax12a1bm85h5kcrs99qjxiqa1qp9caq4zr3mzdg"; depends=[lattice latticeExtra locfit xlsx]; }; + ELT = derive2 { name="ELT"; version="1.6"; sha256="0vbrf912m6f80sqyyrp0z4jhq38fnmcy6hgwy0qh8wgk3p1aqm7c"; depends=[lattice latticeExtra locfit xlsx]; }; ELYP = derive2 { name="ELYP"; version="0.7-3"; sha256="1d91r59m85k91kcjjlvhvbsa9855fyd702bwj7drvk36ssfr8qb9"; depends=[survival]; }; - EMA = derive2 { name="EMA"; version="1.4.4"; sha256="1hqkan9k6ps4qckjrhsgxzham106fm38m5rgayz8i2ji3spvbfca"; depends=[affy AnnotationDbi biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; + EMA = derive2 { name="EMA"; version="1.4.5"; sha256="16iq5a3yrilchqmkyb4g5bmmgpw6psm88n52gmlax75xbiwk8261"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; }; - EMCluster = derive2 { name="EMCluster"; version="0.2-5"; sha256="0nzbpx5pl414bpdqhfr4zv3gkrd77ifl1ysb4acw4h7f92hcd4lh"; depends=[MASS Matrix]; }; + EMCluster = derive2 { name="EMCluster"; version="0.2-6"; sha256="1sd6vlli7qr4859hydyshkzrrfkgb05k97y3vhx3dp2q5xz8s52b"; depends=[MASS Matrix]; }; EMD = derive2 { name="EMD"; version="1.5.7"; sha256="0m2g7akg9h964d6qr1mj20h9pcb2fcmala3skhl0qpy8qz01w5ck"; depends=[fields locfit]; }; + EML = derive2 { name="EML"; version="1.0.1"; sha256="0q5s4gwc3g49v43ffnn7lh5lyxg9bnhcigxwinc1gbry5j8crngv"; depends=[stringr XML]; }; EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.4"; sha256="1i36s8mzp04alff6lqkc798xjzgn61wdpl5i0awjdvg26ka8v7lj"; depends=[GPArotation limSolve shape shiny]; }; EMMIXcontrasts = derive2 { name="EMMIXcontrasts"; version="1.0.0"; sha256="1q7bwf7kkpraj38lz5s1lhhghp7a5lzyj5b9x8024g6rh2qlwp7v"; depends=[]; }; + EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-4"; sha256="0gzy3nrqw880p4sr08qfbyyjqgq08brfm9pk7xkibdnvlrl6mld2"; depends=[MASS mnormt rgl]; }; EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.1"; sha256="16jkq0a9k1gf6gia8r65nwa2lh8zny4jmnq51g2rcqm44s5ylqbh"; depends=[KernSmooth lattice mvtnorm]; }; EMMIXuskew = derive2 { name="EMMIXuskew"; version="0.11-6"; sha256="0japf0l0sj84jna7b5kirp6pgqa4c923ldwphb16ch2xxrgk5n5k"; depends=[MASS]; }; + EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; }; EMP = derive2 { name="EMP"; version="2.0.1"; sha256="1zdy05jfhcgj6415pnm079v8xjg90n3akp1rwq65jbqdar38zj4y"; depends=[ROCR]; }; + EMSC = derive2 { name="EMSC"; version="0.8"; sha256="1fkwmfiw3cg0wkzcwl68dxzyiz7n35jmvjhq6jxdmb59p10f5z1j"; depends=[pracma]; }; + EMSaov = derive2 { name="EMSaov"; version="2.2"; sha256="12y0mj72la4ciwzgr38w9ssik4hixjf5kjsjwrvz6z59hi0ldfly"; depends=[shiny]; }; EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; EMVC = derive2 { name="EMVC"; version="0.1"; sha256="1725zrvq419yj0gd79h8bm56lv2mmk296wq3wapivcy6xn0j97jh"; depends=[]; }; - EMbC = derive2 { name="EMbC"; version="1.9.4"; sha256="1an5585sfc0h5vxd964d28yz6awbx4bbfzaia0v90jmkf9k0apca"; depends=[maptools mnormt move RColorBrewer sp]; }; - ENMeval = derive2 { name="ENMeval"; version="0.2.1"; sha256="1m0h0zi3bxyabj1lq4jh3sbfiy9lbzgxafmy9j4nii7n1f7pf3rq"; depends=[dismo doParallel foreach raster rJava]; }; - ENiRG = derive2 { name="ENiRG"; version="0.1"; sha256="1cnl1mjl5y1rc6fv7c9jw2lkm898l3flfrj3idx9v1brjzyx5xlf"; depends=[ade4 fgui gdata miniGUI R_utils raster sp spgrass6]; }; + EMbC = derive2 { name="EMbC"; version="2.0.0"; sha256="11qnln7a36zcrycbs0lz0qdvili25adv0rxdybmb6kk20a6q1lwf"; depends=[maptools mnormt RColorBrewer Rcpp RcppArmadillo sp]; }; + ENMeval = derive2 { name="ENMeval"; version="0.2.2"; sha256="1w8mjcmxxkx8lxxzzbjpv1i7cm6l8hhml7ynp80s9yiprr04bq9c"; depends=[dismo doParallel foreach raster rJava]; }; + ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; }; ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; }; - EPGLM = derive2 { name="EPGLM"; version="1.1.1"; sha256="1lbzp36lbk9gnbrqxyxgrdrn8rmi5vdxnqxpqdfd09dck263gy6p"; depends=[BH MASS Rcpp RcppArmadillo]; }; + EPGLM = derive2 { name="EPGLM"; version="1.1.2"; sha256="1x7n16pjr38gh5llraszjwgm650zmcm14j6v1kc5k81g4ghgdsq6"; depends=[BH MASS Rcpp RcppArmadillo]; }; EQL = derive2 { name="EQL"; version="1.0-0"; sha256="0lxfiizkvsfls1km1zr9v980191af6qjrxwcqsa2n6ygzcb17dp5"; depends=[lattice ttutils]; }; ERP = derive2 { name="ERP"; version="1.1"; sha256="00w9zz5rp1asvk13sj9gkd14n2akbclsyz26jp5a3r85fh6chdm0"; depends=[fdrtool mnormt]; }; ES = derive2 { name="ES"; version="1.0"; sha256="1rapwf6kryr6allzbjk6wmxpj9idd3xlnh87rwbh6196xb7rp8lv"; depends=[]; }; @@ -630,50 +799,58 @@ in with self; { ESG = derive2 { name="ESG"; version="0.1"; sha256="1jw6239asv6lwxrz5v0r5pzg6v500bqxg8361sh4jj67rsrc7g9m"; depends=[]; }; ESGtoolkit = derive2 { name="ESGtoolkit"; version="0.1"; sha256="0r09arhsvamdyahini5yhgc43msdxwvn45l57xbfszahsnr3b3aq"; depends=[CDVine ggplot2 gridExtra Rcpp reshape2 ycinterextra]; }; ESKNN = derive2 { name="ESKNN"; version="1.0"; sha256="1w43v3q9i7dkx1qwcl5cgh9wdgg5r4s7vfbkk0vcsq9qd8nbcvfy"; depends=[caret]; }; - ETAS = derive2 { name="ETAS"; version="0.2"; sha256="0vj2ghxs43x81p0zmz2z52mlibs6rmqizd5ydhs382w689krhr80"; depends=[maps spatstat]; }; + ETAS = derive2 { name="ETAS"; version="0.4.1"; sha256="1zaz75r4vp79szsa4la81jahci04iiv7kpqlka1zllgpg4qkg4bw"; depends=[fields maps Rcpp spatstat]; }; ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; }; ETLUtils = derive2 { name="ETLUtils"; version="1.3"; sha256="13xq9i9fr34kx1nym7nr02gynshzm4jjn4qzx6ydg044b7xl57jp"; depends=[bit ff]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.1"; sha256="10p392n003sxn8l9sfnksi789k1w191rmkah6gxhji5f41gib5rh"; depends=[Rcpp]; }; + EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; EasyMARK = derive2 { name="EasyMARK"; version="1.0"; sha256="10slkblbyxq98c3sxgs194dnkx996khfcpxj6jhz355dp35z7c9d"; depends=[coda doParallel foreach MASS random rjags stringr]; }; EasyStrata = derive2 { name="EasyStrata"; version="8.6"; sha256="0agmap9lmqbpfw8ijwxmjkcqjvc1ng0jsadkqpfz71a963nkqdcl"; depends=[Cairo plotrix]; }; EbayesThresh = derive2 { name="EbayesThresh"; version="1.3.2"; sha256="0n7cr917jrvmgwfqki7shvz9g9zpmbz9z8hm5ax7s8nnfzphrh4g"; depends=[]; }; - Ecdat = derive2 { name="Ecdat"; version="0.2-9"; sha256="076di40cvfzm7zkj5f08zlk1wizzi7syfp0ghsrr4q61n5c1r72b"; depends=[Ecfun]; }; - Ecfun = derive2 { name="Ecfun"; version="0.1-6"; sha256="1mz2smbxyjzc6vf3vhycgvjwqq6hr22vxikrl0hx185qxgwbgrxn"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML]; }; - EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.0-2"; sha256="1c2pz2a8f57fhq0sk4jgfi4v8jwznsjaqx4jnziz3lak7gmcrwql"; depends=[ggplot2 party raster reshape2 rgdal rkt SoDA sp]; }; + Ecdat = derive2 { name="Ecdat"; version="0.3-1"; sha256="1lvfp2ih8ng3kn3cia687j5fd27iwiak7gk3bhgjp8bnlgblqq02"; depends=[Ecfun]; }; + Ecfun = derive2 { name="Ecfun"; version="0.1-7"; sha256="0s4hhvwyi411xr7c1fv098nmwqjcyvh8vy65j5w9hd80l864lvkl"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML]; }; + EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.0-3"; sha256="09mrbg99id65y2wnmkpdjn39rd7gffa9rwqymqkcmrlz95pizkrm"; depends=[ggplot2 party raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12"; sha256="03dzdw79s0cnnd7mv6wfxw374yf66dlcmj10xh6sh5i352697xp1"; depends=[DEoptim operators topmodel XML]; }; EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; }; EcoTroph = derive2 { name="EcoTroph"; version="1.6"; sha256="0zi6g0ra107s47r32mm9h6r1wll3avi0mpjmhcr0nj9y48nv14w3"; depends=[XML]; }; - EcoVirtual = derive2 { name="EcoVirtual"; version="0.1"; sha256="1c815kxljk4qhw0zs28w16ggasfyyyb6aggffx1m1q21s63h6c8h"; depends=[]; }; - EditImputeCont = derive2 { name="EditImputeCont"; version="1.0.1"; sha256="0c2gagvih77a0k0lg42xipmd396fdpwjabc1syyb3i16b853xggm"; depends=[editrules Rcpp]; }; - EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-1"; sha256="1lqgvs75airbmmwqhf6zfw1mpvy9dj51f92jx78mkp35ynnlny1i"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; - EffectStars = derive2 { name="EffectStars"; version="1.6"; sha256="0chwbvsjfq6flxrbwfm141rnky9b8l1b0scqxxxijyrw4y0f4a8z"; depends=[VGAM]; }; - EffectTreat = derive2 { name="EffectTreat"; version="0.2"; sha256="0az4ajqq98adxrr1wj8pkv16f2g4gg3dikizvp7qa1amcnpahjx3"; depends=[]; }; + EcoVirtual = derive2 { name="EcoVirtual"; version="1.0"; sha256="1adhxwi22psr81xh1szjvn6ycv4zw31xjnswk65iazk3sc4vz7wc"; depends=[]; }; + EconDemand = derive2 { name="EconDemand"; version="1.0"; sha256="1slpwiaxj7w21zdri9myrzwbwzl62m3cnp0g4fr2rkdlzgb6j5yj"; depends=[]; }; + EditImputeCont = derive2 { name="EditImputeCont"; version="1.0.2"; sha256="1l847892grqp1zf8lbvhxcimw06xcmikyry0wn1wf3l4hw4hiamv"; depends=[editrules Rcpp]; }; + EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-2"; sha256="1vkg5gi0gysnw0gz9ah8pdnnlkdfsz0jy53ps2jnnpy8lbr45zc9"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; + EffectStars = derive2 { name="EffectStars"; version="1.7"; sha256="068hk7l7arnj7qrcsavvki06rwrivkmz82mddhndx9vzbiidiklm"; depends=[VGAM]; }; + EffectStars2 = derive2 { name="EffectStars2"; version="0.1-1"; sha256="1yffwnr563vzdq0ph9xs3w0zg5c7l3ima6skn8cqiafr21w332ss"; depends=[miscTools VGAM]; }; + EffectTreat = derive2 { name="EffectTreat"; version="0.3"; sha256="1y8b1867idjbd7i39hhryg4nyijlv6d828z0jspp80fka3sp8xpw"; depends=[]; }; EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; + EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.0"; sha256="07d1da73z16swz4dw2g1mcx1k80yghd6nb9818zax61f37wjmin1"; depends=[]; }; ElemStatLearn = derive2 { name="ElemStatLearn"; version="2015.6.26"; sha256="0r8d0fm4yx7iawcsikksd7i01kbyqz3xkdls74f3ngkvj4iq1rqc"; depends=[]; }; EloChoice = derive2 { name="EloChoice"; version="0.29"; sha256="1r54laim7i8hzgyir47xq7qw8hxzsdw1ss10sljq1rm2lpsci6wk"; depends=[Rcpp RcppArmadillo]; }; EloRating = derive2 { name="EloRating"; version="0.43"; sha256="0gzpi4qjiqn0lzjwy37pkz6fg7dkp2hv2dfqgzfk32wsj0bswgab"; depends=[zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; - EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="1.1.0"; sha256="0l5xmsldc33v6y7f4s6a182axgm2p68nymx5hbj5bb09dxjbb9gg"; depends=[ggplot2 MASS]; }; + EmiStatR = derive2 { name="EmiStatR"; version="1.2.0"; sha256="0g1bs8018vxgnwb578iz5nin13khk7wjj0in47y250j2kcz5nvgn"; depends=[doParallel foreach lattice shiny]; }; + EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="1.2.0"; sha256="034rvdfvqqx4prdchdpl04iyd37h37j3gxfscm8idi35nannjph0"; depends=[ggplot2]; }; EnQuireR = derive2 { name="EnQuireR"; version="0.10"; sha256="00kyclcr8da79lwpqa1vzkwn6pgf197h2biackwgphb0byhi8ssx"; depends=[FactoMineR MASS Rcmdr SensoMineR]; }; EngrExpt = derive2 { name="EngrExpt"; version="0.1-8"; sha256="0zclvckj2i7j4kfs58hcjcl722vl2y6dcnjz238cjfgwv279gqhp"; depends=[lattice]; }; - EnsembleBase = derive2 { name="EnsembleBase"; version="1.0.1"; sha256="0vyg4lhal05s0fjz21pdk144a3j06594jalcmic1y6adq7dc2inq"; depends=[bartMachine doParallel e1071 foreach gbm glmnet kknn nnet randomForest]; }; - EnsembleCV = derive2 { name="EnsembleCV"; version="0.7.1"; sha256="14mvwfjbhsrq9q7k5ph5sf9zriazgfby376v1zjm82r93y4samsf"; depends=[EnsembleBase]; }; - EnsemblePCReg = derive2 { name="EnsemblePCReg"; version="1.0.0"; sha256="16k7ki8qq9bci46dga6visrpccia5rhlv3zq4jj936wkl3q28288"; depends=[EnsembleBase]; }; - EnsemblePenReg = derive2 { name="EnsemblePenReg"; version="0.6"; sha256="0fjp50jbnbhvyd7srvhy0ipysm192d8ikg9yra2vch33zrid2xbm"; depends=[EnsembleBase glmnet]; }; + EnsCat = derive2 { name="EnsCat"; version="1.1"; sha256="1rp354fqq2ihjrmqw9j1qdy86md80xml5sgh2zbyabw3zddmgyn2"; depends=[dendextend ggdendro ggplot2 seqinr]; }; + EnsembleBase = derive2 { name="EnsembleBase"; version="1.0.2"; sha256="1wbkh89gz6m2m9hxbcymsymz3b7pynhdwfyq4qg3h4wn8409anxy"; depends=[bartMachine doParallel e1071 foreach gbm glmnet kknn nnet randomForest]; }; + EnsembleCV = derive2 { name="EnsembleCV"; version="0.8"; sha256="1r9nmi2278lrwp5lpxhi78k10x8a5f5rh9xf1z5gfkc0bmpkhkvz"; depends=[EnsembleBase]; }; + EnsemblePCReg = derive2 { name="EnsemblePCReg"; version="1.1.1"; sha256="1x9n8wjr2cdmlc36c2g7sra7f0cjmgwiyxvll9byfm1lncni2kn9"; depends=[EnsembleBase]; }; + EnsemblePenReg = derive2 { name="EnsemblePenReg"; version="0.7"; sha256="00218yh0vzlb5g94asq5nz4i8blppskdzz9fl4c0v3fld3kxz2md"; depends=[EnsembleBase glmnet]; }; EntropyEstimation = derive2 { name="EntropyEstimation"; version="1.2"; sha256="13kb83lfpkw6yq687j0ci23yn5c9dqjibybyyaplk6jixy08lrvy"; depends=[]; }; EntropyExplorer = derive2 { name="EntropyExplorer"; version="1.1"; sha256="02ljnq9ayxg4lrrnb6nlxr1k5ki8dd5i8hjb9fvvb19hwr2id5h4"; depends=[]; }; - EnvNicheR = derive2 { name="EnvNicheR"; version="1.3"; sha256="1j5r6nv1m1jc76jz45snxc2cidm8cxcx11dv4k4hk46bmp60iq7p"; depends=[IDPmisc]; }; - EnvStats = derive2 { name="EnvStats"; version="2.0.2"; sha256="0lr6znl1cz7a08h31r3r095mlhdgwknj469vd7mb1y95807y8g38"; depends=[MASS]; }; + EnvCpt = derive2 { name="EnvCpt"; version="0.1.1"; sha256="052yz26lypcffwnxdqxm2d029rzcdkw5dvf2xyvyhi5lcnxjrn9r"; depends=[changepoint forecast MASS zoo]; }; + EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; }; + EnvStats = derive2 { name="EnvStats"; version="2.2.1"; sha256="0gjjw2pvqh4m18f7m0pkcr1lsryqmfai1kqc34146h1a4wv7gbdv"; depends=[ggplot2 MASS]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; - Epi = derive2 { name="Epi"; version="2.0"; sha256="04ahl3hvbzjx56c063crq52jmcp5vil5h95bk2vzf4xifhxalspm"; depends=[cmprsk etm MASS plyr survival]; }; + Epi = derive2 { name="Epi"; version="2.7"; sha256="0pc1k9xr6ghm7v4cpi8qkz0b3xbq6yy4r3fqjlqly16rsvznnpcr"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival]; }; EpiBayes = derive2 { name="EpiBayes"; version="0.1.2"; sha256="1qfir0dl085c9ib1acsygmj7gihc4ar98k5niqdsgnmji88h17y2"; depends=[coda epiR scales shape]; }; - EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.9.1"; sha256="10yd24xcydn03rq9kcqcxj5gn25v54ljsm9mgc206g9wf1xx0wjf"; depends=[]; }; + EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.10.0"; sha256="0x0ah55nx68mq05hpp29g9h21is3kx9d84r82j4x4asyqjv92s7v"; depends=[]; }; EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="1.1-2"; sha256="0r56iglhkrqvlsf3gbahd544h944fmbyn6jdc113rhjscf6dl605"; depends=[]; }; - EpiModel = derive2 { name="EpiModel"; version="1.2.5"; sha256="1wydqifaw4kh6lfhapiar2xv2r1bcccb6j6kcmd5cppr2hsl2agc"; depends=[ape deSolve doParallel ergm foreach network networkDynamic RColorBrewer tergm]; }; + EpiModel = derive2 { name="EpiModel"; version="1.2.8"; sha256="1h4mspa7yi2z7rj98nzs3ay2m7gccv7bp63p9sjnqp08pdwk3x5y"; depends=[ape deSolve doParallel ergm foreach lazyeval network networkDynamic RColorBrewer tergm]; }; + EpiWeek = derive2 { name="EpiWeek"; version="1.1"; sha256="19bvjiiz8qn9nlvf3nq238qi1hszlm6asrc03p8ykp6gpl2pi6js"; depends=[]; }; Eplot = derive2 { name="Eplot"; version="1.0"; sha256="1glmkjjj432z9g4gi56pgvfrm5w86iplirnd5hm4s99qci2hgc64"; depends=[]; }; EstCRM = derive2 { name="EstCRM"; version="1.4"; sha256="1p99hmmyiy3havj72jd4xksr1j9gfmy0i7z7f3vqs5sqp72alq1k"; depends=[Hmisc lattice]; }; EstHer = derive2 { name="EstHer"; version="1.0"; sha256="1j8sczwfzil16j85mw5d1c7cxy7wimh0qq7zhmkh7mfnr36m9phr"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; @@ -681,31 +858,33 @@ in with self; { EurosarcBayes = derive2 { name="EurosarcBayes"; version="1.0"; sha256="08m7igh6n8haf8yi8ikrz6ih4agvsnx415kdx4cgjw4xilvgpgqm"; depends=[clinfun data_table plyr shiny VGAM]; }; EvCombR = derive2 { name="EvCombR"; version="0.1-2"; sha256="1f5idjaza91npf64hvcnpgnr72mpb7y6kf91dp57xy9m14k7jx5g"; depends=[]; }; EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; - Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.8"; sha256="135lsn8d5zwk7fljj9ccw7c0bnkddwdfdbjj8af21z5hnm3kl2lx"; depends=[zoo]; }; + EvaluationMeasures = derive2 { name="EvaluationMeasures"; version="1.1.0"; sha256="0b65y4rb650hhlgc18z0sm0danrrawqkazzdl9krl877djrgx87g"; depends=[]; }; + Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.10"; sha256="0v8jjbmr9qqbn2k6jb7jcqmib89x2g7r8wkipxhb4bck0b0z5c0r"; depends=[zoo]; }; EvoRAG = derive2 { name="EvoRAG"; version="2.0"; sha256="0gb269mpl2hbx1cqakv3qicpyrlfb4k8a3a7whhg90masbgmh8f6"; depends=[]; }; Evomorph = derive2 { name="Evomorph"; version="0.9"; sha256="1br2fyggwz2mxpic8sk384xq1lpbpv0j5gf6xyzhkn2n7kfpf6d5"; depends=[geomorph ggplot2 reshape2 stringr]; }; ExPosition = derive2 { name="ExPosition"; version="2.8.19"; sha256="04s9kk8x6khvnryg6lqdwnyn79860dzrjk8a9jyxgzp94rgalnnz"; depends=[prettyGraphs]; }; - Exact = derive2 { name="Exact"; version="1.6"; sha256="0d5g5p98yrcd6v56iadsq448hl522shdqln2icmc3yfnya326as7"; depends=[]; }; + Exact = derive2 { name="Exact"; version="1.7"; sha256="0d0h406w2l99gxq6pmh9crxxrvdidcajk7bqzmifl7nfb77vp1av"; depends=[]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; ExactPath = derive2 { name="ExactPath"; version="1.0"; sha256="0ngvalmgdswf73q0jr4psg0ihnb7qwkamm6h64l01k5rmgd5nm16"; depends=[lars ncvreg]; }; ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; }; - ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.8"; sha256="1vg5lqbk30gm3dq0hn6nihzxa7a1jqnfvm18r2w8dckc576ns6hf"; depends=[aod Biostrings GenomicAlignments GenomicRanges IRanges Rsamtools VGAM]; }; + ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.10"; sha256="11lg1n9wls96cg1byj5bfircw4bsf0rbk37h8fl0hkh29m6gyy16"; depends=[aod Biostrings GenomicAlignments GenomicRanges IRanges Rsamtools VGAM]; }; + ExpDE = derive2 { name="ExpDE"; version="0.1.2"; sha256="0q95d5gklg834f02b2p252jb3kbbjr4sj3wdak9ljibscnnlckml"; depends=[]; }; ExpDes = derive2 { name="ExpDes"; version="1.1.2"; sha256="0qfigbx06b3p04x5v7wban139mp8hg8x77x6nzwa4v6dr226qbkv"; depends=[]; }; ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.1.2"; sha256="0khw2jhg2vxcivgr20ybvrsqhd8l8bir5xjmr4m44za9nhap43bz"; depends=[]; }; - ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.0.2"; sha256="00hw95k64p7zwb9a9n89cyghb8l6rrh33xlciw6g2q1dcmdfxzqg"; depends=[CORElearn semiArtificial]; }; + ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.1.4"; sha256="1n608qz2mj1x36kmbyi7lp0zp744bf9k1zq15yhdv8yy7pcdfl0d"; depends=[CORElearn semiArtificial]; }; ExtDist = derive2 { name="ExtDist"; version="0.6-3"; sha256="1vsxm578bb70wnz3mxm7y1n5vs0x5pby99hvxg5y5ksh2g2ascwa"; depends=[numDeriv optimx]; }; - ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.5.1"; sha256="0b67bap1ks3wq3m6wgr7splpn7wq635wslcks74xqzv0man4kh84"; depends=[Formula]; }; + ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.5.2"; sha256="010k2ddrrmrv4ayr009sm0vdgql5n1hy2b7rxyggj8iqsm8lkxim"; depends=[Formula]; }; FACTMLE = derive2 { name="FACTMLE"; version="1.1"; sha256="0qz2i0hnn84bpps1h8jmfkgp5p59axr0wayj9dvl839radrvpqvy"; depends=[rARPACK]; }; FACTscorer = derive2 { name="FACTscorer"; version="0.1.0"; sha256="1gbfpm5szi6w8iyp7ywpqrmdq0wrv5axj29sj9gxjwmjfh5qgqjx"; depends=[]; }; - FADA = derive2 { name="FADA"; version="1.2"; sha256="1wpjqvhhgvirzcvl8r23iaw63wr8rys19mjy71mn24wg3zwnc2qz"; depends=[crossval elasticnet glmnet MASS mnormt sda sparseLDA]; }; + FADA = derive2 { name="FADA"; version="1.3.2"; sha256="0093j4sgm1fv9bz9h9ldgaac0ggxwwk2qk46c7vxfh9zkmlm6zmb"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; }; FAMILY = derive2 { name="FAMILY"; version="0.1.19"; sha256="1912l2zj2cmh8yx8lkg8fpgvfddn6wbi1vrr4yx04mh73gk1s5mk"; depends=[pheatmap pROC]; }; FAMT = derive2 { name="FAMT"; version="2.5"; sha256="0mn85yy9zmiklfwqjbhbhzbawwp2yqrm9pvm8jhasn9c3kw1pcp2"; depends=[impute mnormt]; }; FAOSTAT = derive2 { name="FAOSTAT"; version="2.0"; sha256="06z8c964sf73ld4v9vybqjsdxskxp3ssyv0a3mpcs9la5y7n9jaz"; depends=[classInt data_table ggplot2 labeling MASS plyr RJSONIO scales]; }; FAdist = derive2 { name="FAdist"; version="2.2"; sha256="0nw3w4g7y846bm57xyjnb13g7z746kxf8mb2hnljwwsypcg6i2n8"; depends=[]; }; FAiR = derive2 { name="FAiR"; version="0.4-15"; sha256="18nj95fiy3j7kf4nzf692dxja3msnaaj5csg745bnajb48l606wz"; depends=[gWidgetsRGtk2 Matrix rgenoud rrcov]; }; FAmle = derive2 { name="FAmle"; version="1.3.4"; sha256="0di9mmpsll7339cw1lss3jk4w1cyqhap6y72r793q8w3x14q0j9d"; depends=[mvtnorm]; }; - FAwR = derive2 { name="FAwR"; version="1.1.0"; sha256="0566h9fgnnk8xankqkpvcshf8acr46lz84sf2pzlmasgvwh7xp19"; depends=[glpkAPI lattice MASS]; }; - FBFsearch = derive2 { name="FBFsearch"; version="1.0"; sha256="1nxfhll9gx9l6hzpcihlz880qxr0fyv5rjghk0xgp8xn4r5wxw11"; depends=[Rcpp RcppArmadillo]; }; + FAwR = derive2 { name="FAwR"; version="1.1.1"; sha256="1hzgaxinq81v4f9743lnlj3bkby8pwmaw1gq0fb4yxazav8y7ihy"; depends=[glpkAPI lattice MASS]; }; + FBFsearch = derive2 { name="FBFsearch"; version="1.1"; sha256="17fi501prnwwy5dh7kv7cx2zlz2dknjj542ga024s7jvg7i2rhg0"; depends=[Rcpp RcppArmadillo]; }; FBN = derive2 { name="FBN"; version="1.5.1"; sha256="0723krsddfi4cy2i3vd6pi483qjxniychnsi9r8nw7dm052nb4sf"; depends=[]; }; FCGR = derive2 { name="FCGR"; version="1.0-0"; sha256="015nnnc9fasx0qjrc3lbxv14rqwyx36xzsw9076grwm5pqahrdsb"; depends=[kerdiest KernSmooth MASS mgcv nlme pspline sfsmisc]; }; FCMapper = derive2 { name="FCMapper"; version="1.1"; sha256="1yjh8rs65nqslvwv7x4rif469zds41s7v3vhq6pca1y17kvj2in1"; depends=[igraph]; }; @@ -714,9 +893,10 @@ in with self; { FDGcopulas = derive2 { name="FDGcopulas"; version="1.0"; sha256="1i86ns4hq74y0gnxfschshjlc6if3js0disjb4bwfizaclwbw3as"; depends=[numDeriv randtoolbox Rcpp]; }; FDRreg = derive2 { name="FDRreg"; version="0.1"; sha256="17hppvyncbmyqpi7sin9qsrgffrnx8xjcla2ra6y0sqzam1145y4"; depends=[fda mosaic Rcpp RcppArmadillo]; }; FDRsampsize = derive2 { name="FDRsampsize"; version="1.0"; sha256="0g8kawzyi9x5yndvh330wzqw6rvcnprwq56ngd0j6z51hvvw8qhw"; depends=[]; }; - FDboost = derive2 { name="FDboost"; version="0.1-0"; sha256="01khx996wx0jk14dgzwy9ma38sdzxmspiw31rcqd6c26nzddsycs"; depends=[gamboostLSS MASS Matrix mboost mgcv refund zoo]; }; + FDboost = derive2 { name="FDboost"; version="0.2-0"; sha256="10rpi132d16cjr3c08p1py8jjxgf0gk812vi3918sr71m5x0m64i"; depends=[gamboostLSS MASS Matrix mboost mgcv refund stabs zoo]; }; FENmlm = derive2 { name="FENmlm"; version="1.0"; sha256="0mq1qa72hsz3pyqjnbyzcc7shr08cq3hng1fz53mn9mvp11vb135"; depends=[MASS Matrix numDeriv]; }; FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; }; + FFTrees = derive2 { name="FFTrees"; version="1.1.8"; sha256="0zslr3k3wjvin14i7y2qfc5acf864kp9ih52bq0sb34590papy18"; depends=[circlize MASS rpart]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGN = derive2 { name="FGN"; version="2.0-12"; sha256="0jxawb4wm1vcp0131mdnc0r24dw8sd29ih0fc2wh6ahy7mxzajqn"; depends=[akima ltsa]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; @@ -724,97 +904,116 @@ in with self; { FHtest = derive2 { name="FHtest"; version="1.3"; sha256="1cay1cl1x4lias55vxc14caznggdw6j8vgqgkxfmvldnvjfljsq1"; depends=[interval KMsurv MASS perm survival]; }; FI = derive2 { name="FI"; version="1.0"; sha256="17qzl8qvxklpqrzsmvw4wq3lyqz3zkidr7ihxc4vdzmmz69pyh2f"; depends=[]; }; FIACH = derive2 { name="FIACH"; version="0.1.2"; sha256="151lc5m8pb7l07kxljm32zy5kd7a4zr5vgsgwsx7ywhijh0r0585"; depends=[Rcpp RcppArmadillo RNiftyReg tkrplot]; }; - FITSio = derive2 { name="FITSio"; version="2.0-0"; sha256="1gf3i1q9g81gydag2gj1wsy6wi5jj2v4j3lyrnh1n2g4kxd6s3cp"; depends=[]; }; + FIT = derive2 { name="FIT"; version="0.0.4"; sha256="150lwqxzznmga5dbrxi12pjva7pvc7nsahs8w5wvibkasndxwxj9"; depends=[gglasso MASS Rcpp RcppEigen XML]; }; + FITSio = derive2 { name="FITSio"; version="2.1-0"; sha256="021xmbavigg70m96xw1bvsdasi5yj2wmafgb6xw4b09fmyv9hvjp"; depends=[]; }; FKF = derive2 { name="FKF"; version="0.1.3"; sha256="01ibihca39zng4wrvhq8h28bmb2rnsjm21xy22b85kpn3mbnh7f1"; depends=[RUnit]; }; FLIM = derive2 { name="FLIM"; version="1.2"; sha256="180az4zwmfcglmvismyacmh7ri4qg8jvhlisqpway0z5z6fsda6r"; depends=[MASS zoo]; }; FLLat = derive2 { name="FLLat"; version="1.2"; sha256="0kdc269vsc94pi00n55196a20qiv6c5pxf2xrh34w4x2vkn5mbxz"; depends=[gplots]; }; FLR = derive2 { name="FLR"; version="1.0"; sha256="0k50vi73qj7sjps0s6b2hq1cmpa4qr2vwkpd2wv2w1hhhrj8lm0n"; depends=[combinat]; }; - FLSSS = derive2 { name="FLSSS"; version="3.1"; sha256="0cyrjq1b0s7x0dz3x2kvd7pr8v4lyw1324ik4rnbj9hv9mf1g0af"; depends=[Rcpp]; }; - FME = derive2 { name="FME"; version="1.3.2"; sha256="1sjnsc8jbylb2bln5ic24s5bany3clzn44lqnymhsy81x88396ff"; depends=[coda deSolve MASS minpack_lm rootSolve]; }; + FLSSS = derive2 { name="FLSSS"; version="5.2"; sha256="1px9n0rnjg32ngy8bs0z1jzmspnkn15q273w74vxjykqfd5xayfd"; depends=[Rcpp RcppParallel]; }; + FLightR = derive2 { name="FLightR"; version="0.4.5"; sha256="0kyvnqjdr82x82l3isqw4kr31x0a15nzgmlggxbv9rjk3pxjnfbx"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme raster RcppArmadillo rgdal rgeos sp truncnorm]; }; + FME = derive2 { name="FME"; version="1.3.5"; sha256="1r1mb61hylsgcryac35bz1pzfcw27gzpvfwkkf0sh754ya6xh69n"; depends=[coda deSolve MASS minpack_lm minqa rootSolve]; }; FMP = derive2 { name="FMP"; version="1.4"; sha256="0w11a78nz4n7zih9h00xkv7prsy9hlxphbpa7hpnbvq9r98g08qm"; depends=[]; }; FMStable = derive2 { name="FMStable"; version="0.1-2"; sha256="00viigpqfbqc4hyl9cwicbwqf2ksjak28qrqaa16jhbqz93j4fck"; depends=[]; }; + FMsmsnReg = derive2 { name="FMsmsnReg"; version="1.0"; sha256="0d58n7lz8d6xgzvyznmhw1byshyiiwk8dc462qr18cl51p0lqnkv"; depends=[mvtnorm]; }; FNN = derive2 { name="FNN"; version="1.1"; sha256="1kncmiaraq1mrykb9fj3fsxswabk3l71fnp1vks0x9aay5xfk8mj"; depends=[]; }; - FPDclustering = derive2 { name="FPDclustering"; version="1.0"; sha256="078vvpn9lwza45l9k53m3yzhrkkyakm1ynm93x5yld4fgkrd3c33"; depends=[ThreeWay]; }; + FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; + FPDclustering = derive2 { name="FPDclustering"; version="1.1"; sha256="1zbf8y3b3scigqp7yiw0hq36lq6fzzvns331jxg5v62f4aj0g496"; depends=[ThreeWay]; }; FRACTION = derive2 { name="FRACTION"; version="1.0"; sha256="0g25dzsbharsq8bzfka96zccaqppdclax24mz5m080ddg4y8zj49"; depends=[]; }; - FRAPO = derive2 { name="FRAPO"; version="0.3-8"; sha256="1wqayyai8pdm1vq6qvpd10qpd882cyjb0y0jl582fxd3a2ic7n14"; depends=[quadprog Rglpk timeSeries]; }; + FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; }; FRB = derive2 { name="FRB"; version="1.8"; sha256="13rp4gqldx84mngrdv5fa9xamkng7b3kgy30ywykcx46gmrym6ps"; depends=[corpcor rrcov]; }; FRCC = derive2 { name="FRCC"; version="1.0"; sha256="1g1rsdqsvwf7wc16dj16y6r0347j8jsv5l1pxvj1h0579zinaf2b"; depends=[calibrate CCP corpcor MASS]; }; - FREGAT = derive2 { name="FREGAT"; version="1.0"; sha256="0fq431iclhp2jjfm3330sw0b73sl9bmzq35sa5nfyk19cg2s18z8"; depends=[Matrix]; }; + FREGAT = derive2 { name="FREGAT"; version="1.0.2"; sha256="0axl2rgsq8n2p7c89gks3ipbgs2qpapypjdb1d1vb1ffph08fiik"; depends=[Matrix]; }; FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; - FRESA_CAD = derive2 { name="FRESA.CAD"; version="2.2.0"; sha256="18hgdxwfk59rd2pbkr0pxjb0d27x81sw7vwky66hvcdzywkdcia8"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; - FSA = derive2 { name="FSA"; version="0.8.5"; sha256="1hnaq11i72zyq7v3d35v8m8ir59l5hmdws586c4dd8qykbzkqdlr"; depends=[car dplyr gdata gplots Hmisc plotrix plyr sciplot]; }; - FSAdata = derive2 { name="FSAdata"; version="0.3.2"; sha256="1g682bj7xiaqcs6ax8jyg02lvx5c1qk0v6a6w0ma3f0qyk6ga7aq"; depends=[]; }; + FRESA_CAD = derive2 { name="FRESA.CAD"; version="2.2.1"; sha256="065iywjay4a06w97lg2z98qq0j60flq4srchyg7c2a3pjrwppqc2"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; + FREddyPro = derive2 { name="FREddyPro"; version="1.0"; sha256="0h2rdydcx9pwjl1zxghzb5vqynrwdkscyq6c9adjgz4dngfwyzsw"; depends=[dismo ggplot2 lubridate raster RColorBrewer sp]; }; + FSA = derive2 { name="FSA"; version="0.8.11"; sha256="0pwqdw7kq2fkxqwwazjcx3g9y6cwrkanfv2j58q2hhjzrhyp08qs"; depends=[car dplyr epitools gplots plotrix plyr sciplot]; }; + FSAdata = derive2 { name="FSAdata"; version="0.3.5"; sha256="0cj4pvhb52zpxi5r3ffkpmwf420waw5kczfw9p9jv6d5byhi6jd5"; depends=[]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.1"; sha256="0hlmz0sc4l9vmb4b2y3j95gh39m1jqrp9bvqsjjqdr0ly1lb7mvm"; depends=[Matrix Rcpp]; }; - FSelector = derive2 { name="FSelector"; version="0.20"; sha256="0gbnm48x5myhxxw8gz7ck9sl41nj5rxq4gwifqk3l4kiqphywlpi"; depends=[digest entropy randomForest RWeka]; }; + FSelector = derive2 { name="FSelector"; version="0.21"; sha256="0qk54b4svihwcmfdp5k8pcvy60568zlg4z2qqiawr7h4inzmvrlk"; depends=[digest entropy randomForest RWeka]; }; FTICRMS = derive2 { name="FTICRMS"; version="0.8"; sha256="0kv02mdmwflhqdrkhzb55si5qnqqgdadgyabqc2hwr6iccn7aq8c"; depends=[lattice Matrix]; }; + FTRLProximal = derive2 { name="FTRLProximal"; version="0.3.0"; sha256="0wnlswvxiw7gvmn9yq1v8jixwspfbvcg3rklqcd0ib38d72ww7w0"; depends=[Matrix]; }; + FUNTA = derive2 { name="FUNTA"; version="0.1.0"; sha256="02yxz95s2hs26mfmgwhv5d54yyjz0aczjpnay8b4gpzbpd6aci61"; depends=[]; }; FWDselect = derive2 { name="FWDselect"; version="2.1.0"; sha256="0w0hkmhcz7h1lixk7p3yffbbalgxwh2lv463vqz361k80sri6wz7"; depends=[cvTools mgcv]; }; FacPad = derive2 { name="FacPad"; version="3.0"; sha256="0h7knzin0rfk25li127zwjsyz223w7nx959cs328p6b2azhgn59b"; depends=[MASS Rlab]; }; FactMixtAnalysis = derive2 { name="FactMixtAnalysis"; version="1.0"; sha256="1l4wfp39b7g38vdk6jpd5zq08sjhsg0s71f662aca2rj6l3a2x3r"; depends=[MASS mvtnorm]; }; - FactoClass = derive2 { name="FactoClass"; version="1.1.2"; sha256="0wg8n2vn586dj5g6js6c7rshsjibciyvg2j53mxgnn0f63xdb3ip"; depends=[ade4 xtable]; }; - FactoMineR = derive2 { name="FactoMineR"; version="1.32"; sha256="1b7v350l2c3swlpqjsc9gh4aiahzqm8kkk9nhc8y4s591xn1rqdv"; depends=[car cluster data_table dplyr ellipse flashClust knitr lattice leaps MASS scatterplot3d]; }; - Factoshiny = derive2 { name="Factoshiny"; version="1.0.2"; sha256="0wwsv0frn2d6a5l5lr9qzqglznaigc23bq7nhcbfy1wlvsmimnr3"; depends=[FactoMineR shiny]; }; - Fahrmeir = derive2 { name="Fahrmeir"; version="2015.6.25"; sha256="1ca4m3m4jip7n489yywdfvh6nlhxspg5awxi23spgfnvhrcs9k3y"; depends=[]; }; - FamEvent = derive2 { name="FamEvent"; version="1.1"; sha256="1z4dvsj0c07il6gj0nhdhy1ss07c0zbraf0gg0hz288k3j756c2v"; depends=[kinship2 MASS survival truncnorm]; }; + FactoClass = derive2 { name="FactoClass"; version="1.1.3"; sha256="1vwjxzz8cdvshslx51vnvgybvmki2x3zfax2q6czxl8kacijdh9n"; depends=[ade4 xtable]; }; + FactoMineR = derive2 { name="FactoMineR"; version="1.35"; sha256="1a8mnyjh3915h3n46p6pph7nv9chxj02pjsyjv2ic78xavz7dqdg"; depends=[car cluster ellipse flashClust knitr lattice leaps MASS scatterplot3d]; }; + FactoRizationMachines = derive2 { name="FactoRizationMachines"; version="0.1"; sha256="0iycm1ih0947b8qsm1p3x42g088pk3vvayb96irmj0cd2a0fix6c"; depends=[Matrix Rcpp]; }; + FactorsR = derive2 { name="FactorsR"; version="1.1"; sha256="06193gw4q9yvhmgzlv8w2xi9f418cjkn9jx72l41426wapjhygdy"; depends=[]; }; + Factoshiny = derive2 { name="Factoshiny"; version="1.0.5"; sha256="1jqk80raqf3kxympkqfayzwwc61yipzh4cbklrb9kmay5ryg4gj9"; depends=[colourpicker FactoMineR shiny]; }; + Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; + FamEvent = derive2 { name="FamEvent"; version="1.2"; sha256="1z611g6nginmga2mzkjlplwmfiiply2wwnbn6icsn412wzj8a606"; depends=[kinship2 MASS survival truncnorm]; }; Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; }; FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; }; FastHCS = derive2 { name="FastHCS"; version="0.0.5"; sha256="02ds9syqh8wpjrqibdv3kqxcyijclm572daqrj262b4b6211v46x"; depends=[matrixStats Rcpp RcppEigen robustbase]; }; - FastImputation = derive2 { name="FastImputation"; version="1.3"; sha256="1x4qai8dycq5pk0q0s34yig30fxxw6vxw3cp87w361640ix95iqk"; depends=[]; }; + FastImputation = derive2 { name="FastImputation"; version="1.3.1"; sha256="05rs5mzb7aww7x06zqn4q053jqxbrc185ra11brm0xkb02cc1dih"; depends=[]; }; FastKM = derive2 { name="FastKM"; version="1.0"; sha256="0sqxd2pg9y6yn1lnxni32ca3bgbmz04k9z37q9pzgijvf9qvik3f"; depends=[rARPACK]; }; FastKNN = derive2 { name="FastKNN"; version="0.0.1"; sha256="1iz8ybzkvbyqwb00s7cp1zvy9xlmyjid441mf62dq08a0zncnyss"; depends=[assertthat pdist]; }; FastPCS = derive2 { name="FastPCS"; version="0.1.2"; sha256="1lqb6g65vna2p7kc2y4kc5piy3280nlxl41bdkxkng2icmq14l58"; depends=[matrixStats Rcpp RcppEigen]; }; FastRCS = derive2 { name="FastRCS"; version="0.0.7"; sha256="1pszpmb5qki4cchd1pc0j6s4sfflaikbfrbisf6c2j9p8ssxxfgk"; depends=[matrixStats Rcpp RcppEigen]; }; FastRWeb = derive2 { name="FastRWeb"; version="1.1-1"; sha256="0xh3710kvnc60pz9rl5m3ym2cxf0mag9gi29y7j3fl4dh2k7zf74"; depends=[base64enc Cairo]; }; - FatTailsR = derive2 { name="FatTailsR"; version="1.6-0"; sha256="0713cgnwail2z404pn0fnpkbiw1fgc1ndh2krd0if2vnd2ibzgih"; depends=[minpack_lm timeSeries]; }; + FatTailsR = derive2 { name="FatTailsR"; version="1.7-0"; sha256="0mywkrq929a0v20a1zaa9zc5l9k2kw5y1zz458iff3i56pzrcrsj"; depends=[minpack_lm timeSeries]; }; FeaLect = derive2 { name="FeaLect"; version="1.10"; sha256="1r7rgcadrqjhxn2g2w16axygsck82fprxg7l14ai11bn4b7h4pmb"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.1"; sha256="1y46bk2yddq0n8p1kj6fwi9q23lsblsrlgf7b630vcbvv8mpz5x2"; depends=[BH digest magrittr Matrix Rcpp]; }; - FedData = derive2 { name="FedData"; version="2.0.8"; sha256="14g9hqb6jwk3m9zyf05rzzbqfxzphb4vymjq6bz2j2ra598p7wyg"; depends=[curl data_table devtools Hmisc igraph raster rgdal soilDB sp]; }; - FeedbackTS = derive2 { name="FeedbackTS"; version="1.3.1"; sha256="1zx64wbl5pzqn69bjhshd3nayxx4wlg7n1zwv7ilh68raxfxnbbx"; depends=[geoR mapdata maps proj4 sp]; }; - Fgmutils = derive2 { name="Fgmutils"; version="0.4"; sha256="0cg2vivshwcqyzlahsirh9jax4nr8alwz7gf4qxcdmxvzjaln6lq"; depends=[data_table devEMF plyr png sqldf stringr]; }; + FedData = derive2 { name="FedData"; version="2.4.0"; sha256="1rai3hgx10q6jcjpqd0jsqvp15am3i48n1ph6dl88mhwgiblvh9w"; depends=[curl data_table devtools doParallel dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp]; }; + FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; + Fgmutils = derive2 { name="Fgmutils"; version="0.9.4"; sha256="0k5pafgrcb7smklgzgw2mf6npj55nm5fsr6k0xp6ji380rvdxc0y"; depends=[data_table devEMF ggplot2 gridExtra plyr png ReporteRs sqldf stringr]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; + FinAna = derive2 { name="FinAna"; version="0.1.1"; sha256="092jw6y06r48dph4h0dnsv96bjh8knx91lrdlchb3q43dzfdz4i1"; depends=[]; }; FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; }; - FinCal = derive2 { name="FinCal"; version="0.6.2"; sha256="0hfmbg4ha6vr80nl1772cahjzqicak038d6dg6784fs2rqvzjhw2"; depends=[ggplot2 RCurl reshape2]; }; - FinCovRegularization = derive2 { name="FinCovRegularization"; version="1.0.0"; sha256="0da7asm4mvbd4wvqll5gdvckb10ccfx7gy141xbxyaixdhgi6zl4"; depends=[quadprog]; }; + FinCal = derive2 { name="FinCal"; version="0.6.3"; sha256="1clvnvhpf2krrf8flhmdxmys6ym3xw3v4v07kk1if4xb0dfk9wgy"; depends=[ggplot2 RCurl reshape2]; }; + FinCovRegularization = derive2 { name="FinCovRegularization"; version="1.1.0"; sha256="0h3i46s0rpqvgnqgjwqrlrfa3vv5jn2hm6bqc0ijwmrr9f80g4ir"; depends=[quadprog]; }; FinTS = derive2 { name="FinTS"; version="0.4-5"; sha256="16m57h6rk4344aalfwaz7hsyis30c1dirsyx8ih661ihgqn1ai1r"; depends=[zoo]; }; FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.2.0"; sha256="0lx8gqmnapyizlg0qdcjy8xrkpbhj0f7nc95l86a6xy82hz62dzb"; depends=[quantmod TTR xts zoo]; }; + FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; }; FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; - FindIt = derive2 { name="FindIt"; version="0.5"; sha256="0bj4al4b7na3w5y783nqyd2wc1pmwfmgf2p4q6n7vqbzqghy0a3q"; depends=[glmnet lars Matrix]; }; + FindIt = derive2 { name="FindIt"; version="1.0"; sha256="00psd20j84vdjw2jyilkfb2z9kfs5c139rky8d8rpl8sz97szpf2"; depends=[arm ggplot2 glmnet lars Matrix quadprog]; }; FindMinIC = derive2 { name="FindMinIC"; version="1.6"; sha256="0vlr56nw32msvz8bljrw82nzrnazncs6nz7zisidffm2v3najkar"; depends=[nlme sets]; }; + FinePop = derive2 { name="FinePop"; version="1.3.0"; sha256="1ax07zcrgmbgpxcs8dyg91pnvqfix97vdiyy9zpc767q2286gpxq"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; FisherEM = derive2 { name="FisherEM"; version="1.4"; sha256="1lhkyyk82i6alxyiqrvy5fx60f8vab0y62zmw5fjaq6h0vczqn3s"; depends=[elasticnet MASS]; }; FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; FitARMA = derive2 { name="FitARMA"; version="1.6"; sha256="1r9mqrqkm4wh3nd6v9wmpj23gw21i4p89p6z4c7639kn4f590ldk"; depends=[FitAR]; }; + FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; }; FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-3"; sha256="0766ghwbdd7r4yj5xf31hnknn775ziw1hhrn13wf8bibyd8blz70"; depends=[nlme]; }; - FlowScreen = derive2 { name="FlowScreen"; version="0.9"; sha256="165zhlnirkmmnmxq9wcikz1ray6fswlv3nba14vr9q8ba9z359wv"; depends=[changepoint evir zyp]; }; + FlowScreen = derive2 { name="FlowScreen"; version="1.2.1"; sha256="0wdlw8wz10jb0ablfkpjmhkz31h7c19blpzifg1kknknvg8wmbkd"; depends=[changepoint evir zyp]; }; Flury = derive2 { name="Flury"; version="0.1-3"; sha256="105fv9azjkd8bsb9b8ba3gpy3pjnyyyp753qhrd11byp3d0bbxy0"; depends=[]; }; ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; }; ForImp = derive2 { name="ForImp"; version="1.0.3"; sha256="0ai4i6q233sdsi8xilpbkxjqdf4pxw93clkdkhcxal6q43rnf7vd"; depends=[homals mvtnorm sampling]; }; - ForeCA = derive2 { name="ForeCA"; version="0.2.2"; sha256="1iszhiqn0vg3l2c8cgshk8qir0dqml4jsl942hdsmjm6raxlb6n9"; depends=[ifultools MASS sapa]; }; + ForeCA = derive2 { name="ForeCA"; version="0.2.4"; sha256="1i19lmhl1kgfnd7zipjr6xp5ir9rvjy13sbq321jaf8ya60bjdd9"; depends=[ifultools MASS reshape2 sapa]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; + ForestTools = derive2 { name="ForestTools"; version="0.1.0"; sha256="0jvsz96ll3apl4br5m8cbs24yds05xh93brvrib6yiwcss55avf1"; depends=[APfun imager maptools raster rgdal rgeos sp TileManager]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; Formula = derive2 { name="Formula"; version="1.2-1"; sha256="02in5325zzrqbhlygx6s0dinj6ymw845q70y56frqacv25ayzcax"; depends=[]; }; ForwardSearch = derive2 { name="ForwardSearch"; version="1.0"; sha256="0yd47832piqxzjxgl7bc8pn0c8f7vbgsm9z6894rzyi615kjl70b"; depends=[robustbase]; }; FourScores = derive2 { name="FourScores"; version="1.0"; sha256="0d21mrl9bzsvhljv7ymiyck508smp66w9qivrb2rp0p803h9yibm"; depends=[]; }; - FrF2 = derive2 { name="FrF2"; version="1.7-1"; sha256="0i9hfx7n0g866imdsmalqzs8v95vx08cz97hi8311v1wc3pqsn1j"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; }; + FrF2 = derive2 { name="FrF2"; version="1.7-2"; sha256="1qjgx7zbnabbs4zq7hn3j1i1xyy4yjwnz7pn25kz9s3szqr1fk66"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; }; FrF2_catlg128 = derive2 { name="FrF2.catlg128"; version="1.2-1"; sha256="0i4m5zb9dazpvmnp8wh3k51bm0vykh4gncnhdg71mfk4hzrfpdac"; depends=[FrF2]; }; FractalParameterEstimation = derive2 { name="FractalParameterEstimation"; version="1.0"; sha256="12v72zn1san2kv82b9y1vd0gzd1fa800yscc63zlq8lfflz47xvz"; depends=[]; }; - Fragman = derive2 { name="Fragman"; version="1.0.3"; sha256="0ar6nikfqcgv95xr0kbdwyiwc66a6rgrnnybhpk0fcrpkkjvzkm9"; depends=[]; }; + Fragman = derive2 { name="Fragman"; version="1.0.7"; sha256="0dh1gk2arj7r6zd5dhkmxpr7a1hd3pl8x5klmlsg4n6rwsx2p4v8"; depends=[]; }; Frames2 = derive2 { name="Frames2"; version="0.2.1"; sha256="0xbz19v5r1h15p8mf94vacw04h3kvmm88ayy4b1aqxrd925n63mw"; depends=[MASS nnet sampling]; }; - FreeSortR = derive2 { name="FreeSortR"; version="1.1"; sha256="03z5wmr88gr6raa2cg7w4j6y5vgxr3g8b8axzhbd7jipswr5x1jf"; depends=[ellipse smacof vegan]; }; + FreeSortR = derive2 { name="FreeSortR"; version="1.2"; sha256="01h29p9qhlkd2qmmmw23wh9lrsggvp1h3r2laqi2lln7d7srcwbj"; depends=[ellipse smacof vegan]; }; FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; }; - FunChisq = derive2 { name="FunChisq"; version="2.2.2"; sha256="1wfj42ibzk8riana50yv7r7fl78nggpgmgwn9q2qyrbr1413jj2b"; depends=[BH Rcpp RcppClassic]; }; + FunChisq = derive2 { name="FunChisq"; version="2.3.3"; sha256="0n4c6lfljp7mbl05r75rj31q0rkwnmj6gif3fmxmv1y5x7x2jrxj"; depends=[BH Rcpp]; }; FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.8"; sha256="04rfmdy1hzxqy16csj6cf3x2kj9lg1xxvvnn494xjdwjdkfkyl09"; depends=[mvbutils]; }; Funclustering = derive2 { name="Funclustering"; version="1.0.1"; sha256="0i6g98mfgdyc9hdzvviynrgqhkzicp8y6s0scqy3ifgk9h1k79dw"; depends=[fda Rcpp RcppEigen]; }; FunctionalNetworks = derive2 { name="FunctionalNetworks"; version="1.0.0"; sha256="071hjgiccbrf1gxrh7niw2w1p6vgc77qvrildi59xhk53qcwzqdp"; depends=[Biobase breastCancerVDX]; }; FusedPCA = derive2 { name="FusedPCA"; version="0.2"; sha256="0z4kvm6mn11fmc8w62aky2binjdcgrw4ij5vg65sb55da9s8d2kd"; depends=[genlasso]; }; + Fuzzy_p_value = derive2 { name="Fuzzy.p.value"; version="1.0"; sha256="1n2m6p03bfip2fxfg8v4k43zgv7lcwwgv4myw2rj46djfwl2l9i7"; depends=[FuzzyNumbers MASS]; }; + FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.8.0"; sha256="1rpmwyqgdbc4hcx375m6j6djbhm4ggb6j9sni2dq8rwza96qv5zb"; depends=[]; }; FuzzyLP = derive2 { name="FuzzyLP"; version="0.1-3"; sha256="1c7yynrz0vfvan9mfin2vsrkhhi3sy8c5nya7l8hja0nh1a4bzki"; depends=[FuzzyNumbers ROI ROI_plugin_glpk]; }; + FuzzyMCDM = derive2 { name="FuzzyMCDM"; version="1.1"; sha256="0ss0s65mm6j0nax4mb9g668d9n9cgl0l016mc3h9hbjxfpqrbkks"; depends=[RankAggreg]; }; FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-1"; sha256="15i0chp43y8xfyzkjrbljmdvgjjx9w1l5ayhvavk9y85pwb147b8"; depends=[]; }; - FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.1"; sha256="0cj6dqb5iy4gw7kkip9jvk9djf6dx20078kmb42br8sim1065j8m"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; + FuzzyR = derive2 { name="FuzzyR"; version="2.0"; sha256="1li54ad0lqmmdsr9pcp56d2n8ki6hzdljy8l3lzhrsjmii7ycasw"; depends=[plyr shiny]; }; + FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.2"; sha256="01rdvsvdfyg8cz6rl1kzwzg9ns5zmikmb7ljlavvzcbg4i1vliqq"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; + FuzzyStatTra = derive2 { name="FuzzyStatTra"; version="1.0"; sha256="1ijrlnlmq9d5ahgrpzba6kzkaq1zq59zqdgcizybsf9alsswcm00"; depends=[]; }; FuzzyToolkitUoN = derive2 { name="FuzzyToolkitUoN"; version="1.0"; sha256="104s45mmlam67vwpshhpns2mgwvmhnbj8w1918jyk2r5mqibwz06"; depends=[]; }; G1DBN = derive2 { name="G1DBN"; version="3.1.1"; sha256="015rw3bpz32a8254janddgg1ip947qgcvmiwx5r3v7g8n854bwxn"; depends=[igraph MASS]; }; G2Sd = derive2 { name="G2Sd"; version="2.1.5"; sha256="165i6x2k56vwhk5p2p5m9vjmp9flblsapjdlz7nw9b719l6xz5zk"; depends=[ggplot2 reshape2 rJava shiny xlsx xlsxjars]; }; - GA = derive2 { name="GA"; version="2.2"; sha256="1pk80jwzvpmi61df0y331qvl8jkdizblg93s7gaspkbzy50wyfkp"; depends=[foreach iterators]; }; + GA = derive2 { name="GA"; version="3.0.2"; sha256="0jpgbniyxvilnr1jv6vmrfgnar3qczvq819xjb70inp5f41zd6wx"; depends=[foreach iterators]; }; GA4Stratification = derive2 { name="GA4Stratification"; version="1.0"; sha256="0li23mrxjx72fir16j3q06fa32cicck4pfc30n0dy2lysf81m9gs"; depends=[]; }; GABi = derive2 { name="GABi"; version="0.1"; sha256="1zmiaqbd1jrpiz9hk16s8rggcpl3xyyhjkkdliymx2p42vy5b5mf"; depends=[hash]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; @@ -824,62 +1023,83 @@ in with self; { GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GAR = derive2 { name="GAR"; version="1.1"; sha256="12xgk87bndinx7ibaasn51a9fad3ymvpjmixa7l18pfy99l3pcll"; depends=[httr jsonlite]; }; - GAabbreviate = derive2 { name="GAabbreviate"; version="1.2"; sha256="1q3m3srkh1zzrfxnl1hbhg4imml8zibd6vhshvwnbhz7pqyplzn9"; depends=[GA psych]; }; + GAS = derive2 { name="GAS"; version="0.1.5"; sha256="14n973bks28chxxlidz578359nh8kd2jjp32k1fp2r8qfddsk21i"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; + GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; GCD = derive2 { name="GCD"; version="3.0.5"; sha256="1ami5xw5xx464pxr9y1z9bb3dvj46vx3wrbh19w4g7sk8yjvh5nl"; depends=[]; }; - GCPM = derive2 { name="GCPM"; version="1.2"; sha256="034vsy9kjag7c3mzgswbm356cyay908dwnxj63gd93aakknm120x"; depends=[Rcpp RcppProgress]; }; + GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; + GCalignR = derive2 { name="GCalignR"; version="0.1.0"; sha256="0prky8n2j6xvq4srxcp08k4wlikg7hhj78mw7fjqbf01sl0zhwz5"; depends=[ggplot2 readr reshape2 stringr]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; GDAtools = derive2 { name="GDAtools"; version="1.3"; sha256="1av29mllix0az4n85vxh1344j6jmy103hd78ibjwxalm620rp7ns"; depends=[FactoMineR]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; + GDINA = derive2 { name="GDINA"; version="1.2.1"; sha256="1ay3s4r8v4zzggmxbq7m1kppb2bpa8mcgsiaak82955l19k40dy4"; depends=[alabama data_table ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp]; }; + GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; + GEEmediate = derive2 { name="GEEmediate"; version="1.0.0"; sha256="0fs5gamfpv5z4p92x76gy55zmf0pmh5cdhgnp9dnh58x0d9mij5y"; depends=[gee]; }; GENEAread = derive2 { name="GENEAread"; version="1.1.1"; sha256="0c3d76yl8dqclk8zhhgrd6bv6b599vkpbyg3hjspb6npdw6zs6k8"; depends=[bitops]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.4"; sha256="1gl8qsgm9iy57rlajgc47lfxah52jsg7lpj131a6813kj0c639l7"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; GEOmap = derive2 { name="GEOmap"; version="2.3-8"; sha256="14nar0djn8jzcyv0aij79xr3iqbgllrpcnfazi865plfa5ah7k9v"; depends=[fields MBA RPMG splancs]; }; - GERGM = derive2 { name="GERGM"; version="0.7.4"; sha256="02r5gkyhdqkcq1q1g9xg595riny77mdifx7maj0agby5jm49y3x0"; depends=[BH coda ggplot2 igraph plyr Rcpp RcppArmadillo stringr]; }; + GERGM = derive2 { name="GERGM"; version="0.10.0"; sha256="0fg984d553zfnnv00flmlzib4zjvgp33lgmbczvr4wssj4rsbpj7"; depends=[BH coda ggplot2 igraph plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; }; + GESE = derive2 { name="GESE"; version="2.0.0"; sha256="04gd9xplwk5kknwikn5c8wa01bbc10ijfj08gpycf0x0q54szf8y"; depends=[kinship2]; }; GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; }; GEVStableGarch = derive2 { name="GEVStableGarch"; version="1.1"; sha256="1iypv0k4cbvsdyglgvf7y52sqvl5qcin627pjqwq42kisqynm8d7"; depends=[fExtremes fGarch Rsolnp skewt stabledist timeDate timeSeries]; }; GEVcdn = derive2 { name="GEVcdn"; version="1.1.4"; sha256="13p6wi72z6j7iyp5hv16ndvsq6jf6hdqgcmf1i8g713gn73l79kj"; depends=[VGAM]; }; + GEint = derive2 { name="GEint"; version="0.1.2"; sha256="12jkrflv9p05bnsx5xqyr55c18q1vrs1wlcni38zyppd334yyiyh"; depends=[geepack mvtnorm nleqslv pracma rje speedglm]; }; GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; - GFD = derive2 { name="GFD"; version="0.1.4"; sha256="1id4c07b061sjkvigl88zk6bv10brclcsz32z43dbp49xjd5x6nl"; depends=[magic MASS Matrix plotrix plyr RGtk2]; }; + GFA = derive2 { name="GFA"; version="1.0.0"; sha256="1mgcgdypfpd3i5n5kgk162p1jp9gfz1h7h3rlzrw9srsbc6dza97"; depends=[]; }; + GFD = derive2 { name="GFD"; version="0.2.2"; sha256="1llz22cqp26336ybfkmn98v80zl09hpjx34f9c5bf39lc6w1645h"; depends=[magic MASS Matrix plotrix plyr]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; - GGIR = derive2 { name="GGIR"; version="1.2-2"; sha256="186yp8314ygsz5w3zrv76jswh79s5laglnw2lair69ib7d94bsh1"; depends=[]; }; + GGIR = derive2 { name="GGIR"; version="1.4"; sha256="0vg7kpz8cx12jc06z8hjgss6n20z9h262z4rki4mnmllv2hmjqx2"; depends=[data_table]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; - GGMselect = derive2 { name="GGMselect"; version="0.1-10"; sha256="0ihxxih5fw470pnmnljsarahd4xim6ncx3w7fym5i5q86bqcyahb"; depends=[gtools lars mvtnorm]; }; - GGally = derive2 { name="GGally"; version="1.0.1"; sha256="1wradjcphk6mr817lnk3q3rbingn8xrsrprsxh0mv4w8g0wcibif"; depends=[ggplot2 gtable plyr reshape]; }; + GGMselect = derive2 { name="GGMselect"; version="0.1-11"; sha256="1ir3zyi9xxq9aq1zxl506x1fwxsv7rd350k461l9lc2r5338xrgh"; depends=[gtools lars mvtnorm]; }; + GGally = derive2 { name="GGally"; version="1.3.0"; sha256="12ddab0nd0f9c7bb6cx3c22mliyvc8xsxv26aqz3cvfbla8crp3b"; depends=[ggplot2 gtable plyr progress RColorBrewer reshape]; }; GHQp = derive2 { name="GHQp"; version="1.0"; sha256="0qpcpwv7rz67qhz1p5k2im02jvs7l8z9sa6ypz13hig5fzm8j9bp"; depends=[statmod]; }; + GHap = derive2 { name="GHap"; version="1.2.2"; sha256="1qwv4llcixklr9d6lq4ljzbs8al80xnvqkcajnh8dbf3axmlmr5b"; depends=[bigmemory lme4 Matrix]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.4"; sha256="0sflklyzl2l5bcjhz7n75aww76ih93sq5mbgdc4v1p0vqhrbbg47"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; - GLDEX = derive2 { name="GLDEX"; version="2.0.0.3"; sha256="0ymarfwpm7gagq6wk40n0nsmd14r19pbqbrgigk6cvb8dc2zpbfz"; depends=[cluster]; }; - GLDreg = derive2 { name="GLDreg"; version="1.0.3"; sha256="0d7cclmmhgaf95bw738d8hz166qsr9df33g73ihy8pla3sg5lr7q"; depends=[GLDEX]; }; - GLMMRR = derive2 { name="GLMMRR"; version="0.1.2"; sha256="0mvldp1vf15pga0c7awf4xi431nh16rzcl0895pn728x30g2pk8d"; depends=[lme4]; }; + GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; }; + GLDEX = derive2 { name="GLDEX"; version="2.0.0.5"; sha256="0mr8qhccp8dndp43v8ym22f4djrjr8qcxbv61lwabk2462llwln6"; depends=[cluster]; }; + GLDreg = derive2 { name="GLDreg"; version="1.0.6"; sha256="02g4g3w7dq5jjrir1fcxirbx36ci04fcadli921r6hz4xifhil7d"; depends=[ddst GLDEX]; }; + GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; + GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; GLSME = derive2 { name="GLSME"; version="1.0.3"; sha256="0flja5gk25k4z9hwskvdw4c1f88scc47xvc1l3d2447fkfrb0bwc"; depends=[corpcor mvtnorm]; }; - GMCM = derive2 { name="GMCM"; version="1.2.2"; sha256="1zvhbxz1bli460c9nh2p3vx7v3a5w2jwyyyd7r8dqgxpf3xr1pzw"; depends=[Rcpp RcppArmadillo]; }; + GMCM = derive2 { name="GMCM"; version="1.2.4"; sha256="1y0yr6i4l28qw22drca7r4mzqjfbpm3jdssfb7p8pc664g6vmm81"; depends=[Rcpp RcppArmadillo]; }; GMD = derive2 { name="GMD"; version="0.3.3"; sha256="0hdya8ai210wxnkfra9bzyswk3gib5fm53fs61rh0nsmg3ysdga6"; depends=[gplots]; }; - GMDH = derive2 { name="GMDH"; version="1.3"; sha256="0a4n98247r5a7j8p63ih9845gwfik59j9qh604hjw16gwvb7g8n2"; depends=[MASS]; }; + GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; GMMBoost = derive2 { name="GMMBoost"; version="1.1.2"; sha256="01q165vkdiv4qh96lha0g2g94jpnzdclbby6q43ghh9j1yrd4qzj"; depends=[magic minqa]; }; GNE = derive2 { name="GNE"; version="0.99-1"; sha256="1avsl54xdlqq8pw16g84igcwms7if7lvdblqvfc2cn3sk8qi5xdv"; depends=[alabama BB nleqslv SQUAREM]; }; GOGANPA = derive2 { name="GOGANPA"; version="1.0"; sha256="1xbir21zvr5hv2y6nndzpsrpmnr7glrc7y6xgcyb856wx46ajan9"; depends=[GANPA WGCNA]; }; - GORCure = derive2 { name="GORCure"; version="1.0"; sha256="0jkhhawbaihqb0kk6l4g5m65nfbww5fmr1hh7bgsnbsy0qv6hfp0"; depends=[ICsurv MASS pracma survival]; }; - GOplot = derive2 { name="GOplot"; version="1.0.1"; sha256="0i4b26wkgf77z515027bmq5pqd21bhg0qrg6jbmwiv59nczr146b"; depends=[ggdendro ggplot2 gridExtra RColorBrewer]; }; + GORCure = derive2 { name="GORCure"; version="2.0"; sha256="1hazin0q74hf16azxa5h08kfj7g1079q77n2fn4fahpfxb8hmvwm"; depends=[ICsurv MASS pracma survival]; }; + GOplot = derive2 { name="GOplot"; version="1.0.2"; sha256="1y8dv0kbzpr9za91njw0x233vx5d13vqml9hmpddcyi9s6va5nix"; depends=[ggdendro ggplot2 gridExtra RColorBrewer]; }; GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; }; + GPB = derive2 { name="GPB"; version="1.0"; sha256="18cdgz00j0j1rchzn2l253rii3b0iv9ipnh5sk3yvmwrqiabmrf8"; depends=[]; }; GPC = derive2 { name="GPC"; version="0.1"; sha256="1naqy5g6a0z65wssfic5s7cw9v0zjckk526nian3l98ci22sz0j7"; depends=[ks lars orthopolynom randtoolbox]; }; GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; }; GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; - GPareto = derive2 { name="GPareto"; version="1.0.2"; sha256="05q2r51byzxj5jrxbpw1zicm3jc2vx4lqibhspbq61hxbsg6hy4m"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud]; }; + GPareto = derive2 { name="GPareto"; version="1.0.3"; sha256="1krvnmyn0yw65fn92lsxw0y3pxzpkx6b5dsgvrm47gyaphpynk4s"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud]; }; GPfit = derive2 { name="GPfit"; version="1.0-0"; sha256="0g0g343ncqsqh88qq9qrf4xv5n3sa980kqbvklcx534dmn6a7n2i"; depends=[lattice lhs]; }; + GPrank = derive2 { name="GPrank"; version="0.1.2"; sha256="0z9xhydnq04p872zl7glxhndmijjihfgffl6bijc9a0rs95zaacd"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPseq = derive2 { name="GPseq"; version="0.5"; sha256="0k5xif44qk2ppvcyja16xshmfciq1h84l1w6d8dfkyryfajbc8ai"; depends=[]; }; GPvam = derive2 { name="GPvam"; version="3.0-3"; sha256="0dmws29ahbjhx82s2i8jfzhl8pp5q201a592w90jvhwy2bnm1ywk"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; + GRANBase = derive2 { name="GRANBase"; version="1.2.1"; sha256="1fxbgl7z61qdfg0lcjylc00wr819kg9kycc42gsjl1gxxy94b433"; depends=[hwriter switchr]; }; + GRAPE = derive2 { name="GRAPE"; version="0.1.0"; sha256="0kcyz8x6yzq83hcwdlx7yw5jpww819f9d1hax19vn31ccq71xkyw"; depends=[]; }; + GRS_test = derive2 { name="GRS.test"; version="1.0"; sha256="1igyb3rma1v2arx1k16fanvzmlywx0n9lf5jz69vnf6z2qmqvrg5"; depends=[]; }; GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; }; GRaF = derive2 { name="GRaF"; version="0.1-12"; sha256="1d7mr2z49v6ch4jbzh0dj2yjy2c5p51ws38xfz233sjz475snajr"; depends=[dismo]; }; GSA = derive2 { name="GSA"; version="1.03"; sha256="1h1sbpn1rrdh44w4fx2avc7x24ba40mvpd8b2x5wfrc7a294zf6z"; depends=[]; }; + GSAQ = derive2 { name="GSAQ"; version="1.0"; sha256="1p1rab2dlh4h9bfg464nhx708p7kc4q01ifccdh5756lq1qh2kzv"; depends=[]; }; GSAgm = derive2 { name="GSAgm"; version="1.0"; sha256="18bhk67rpss6gg1ncaj0nrz0wbfxv7kvy1cxria083vi60z0vwbb"; depends=[edgeR survival]; }; - GSE = derive2 { name="GSE"; version="3.3"; sha256="162k50lq7q4fs004d20x2fjnrfm21i33lmdqx6cc59xxpbwgcflx"; depends=[ggplot2 MASS Rcpp RcppArmadillo rrcov]; }; - GSIF = derive2 { name="GSIF"; version="0.4-7"; sha256="1c2lk6yzacwrxvs5v0al8hwvi7ncqdvn4f7ngicy6g8iyi4p7z08"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA sp]; }; + GSE = derive2 { name="GSE"; version="4.1"; sha256="00pvpramk7n3195i3vkmp982igyc1b0xzjqs7xdsvzsnfv7kpcbh"; depends=[cellWise ggplot2 MASS Rcpp RcppArmadillo robustbase rrcov]; }; + GSED = derive2 { name="GSED"; version="1.1"; sha256="0r0bgfmlxb81am34gm5c1bxfwkjl82f51ck1lqf7jwc7w08d75az"; depends=[memoise rootSolve survival]; }; + GSIF = derive2 { name="GSIF"; version="0.5-3"; sha256="1cvdgdnsddl1z6qmxwdglvrf3p8ph8cf3ablnxspn4k70cpiwq3c"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; + GSMX = derive2 { name="GSMX"; version="0.1"; sha256="1bw249b3a58d9q8cj91w9syyghf6sy8xqnx2jawp83qp8lfbix5x"; depends=[MASS psych]; }; + GSODR = derive2 { name="GSODR"; version="1.0.1"; sha256="14rc9gs4375mwk5gzz17iadb5gnphw411rh4sxhg8y48gj6drlqs"; depends=[curl data_table dplyr fields plyr purrr R_utils readr rgdal sp]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; - GUIDE = derive2 { name="GUIDE"; version="1.0.9"; sha256="1y0y6rwv1khd9bdaz5rl9nmxiangx0jckgihg16wb6hx6kf8kzc1"; depends=[rpanel tkrplot]; }; - GUILDS = derive2 { name="GUILDS"; version="1.2.1"; sha256="1z90qjgrx16yk956phbifcr7jd3w59h7akzz7p6g5ymrcjzih4qf"; depends=[pracma Rcpp subplex]; }; + GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; + GUIDE = derive2 { name="GUIDE"; version="1.2.3.1"; sha256="02chn2mzh6smmiv8rp00cq5rff18bqszazbk8svmvvlgn0a25pj4"; depends=[rpanel tkrplot]; }; + GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; GUTS = derive2 { name="GUTS"; version="1.0.0"; sha256="0s64swhs7wpknvycca7qj36kj910anrh9qrbpyfjl9lw8cqa2058"; depends=[Rcpp]; }; GUniFrac = derive2 { name="GUniFrac"; version="1.0"; sha256="0xr68yv3h2lwn7sxy8l5p9g1z3q9hihg9jamsyl70jj9b2ic80jn"; depends=[ape vegan]; }; @@ -887,84 +1107,108 @@ in with self; { GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.1"; sha256="0c3mcvmvxvgibja6rb8j2mhmmjny825wgvi1dw0pz8pq1kg1q0ay"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; - GWRM = derive2 { name="GWRM"; version="2.1.0.1"; sha256="1hnnk2p0h8ssg5izqb8lplbpbcldqhfahxv0wkbw5cqyc7ydblak"; depends=[doParallel foreach]; }; - GWmodel = derive2 { name="GWmodel"; version="1.2-5"; sha256="14pp1hy4bqr6kg9fy9nchjm6kb3l85f58rl2449b7wv7vsk3yfvk"; depends=[maptools robustbase sp]; }; - GWsignif = derive2 { name="GWsignif"; version="1.0"; sha256="04663qgy3xmijrx8m1s5ql7zj70mgsd58dl08ci742l1fzmfya5f"; depends=[]; }; + GWRM = derive2 { name="GWRM"; version="2.1.0.2"; sha256="1i8f2a43vn7zjsfb108ckjhi23m93mbm3lc7w7w6grp4ny98xr6g"; depends=[doParallel foreach]; }; + GWmodel = derive2 { name="GWmodel"; version="2.0-1"; sha256="1030qkrwn4b40553j80ignq2dvrnsi1p6wvhq7iq7nmc9jcil1wz"; depends=[maptools Rcpp RcppArmadillo robustbase sp]; }; + GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; }; GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; }; - GameTheory = derive2 { name="GameTheory"; version="2.0"; sha256="0p5zz1waffynnciq1mbjjlnmaif1fnr5799y6izk50ckhh07bgfs"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; + GameTheory = derive2 { name="GameTheory"; version="2.5"; sha256="05isd08z7k52nvic52gnlmnqvvrxxipcn2njfiz3kp105wvdw1rp"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; + GameTheoryAllocation = derive2 { name="GameTheoryAllocation"; version="1.0"; sha256="0733vmyr0d9scjd5ixpnggr548snd7nj70knf5hbzc59nmbc5y11"; depends=[e1071 lpSolveAPI]; }; Gammareg = derive2 { name="Gammareg"; version="1.0"; sha256="1a5wibnbd8jg0v8577n1x9kc358qpd4jz7l8h7r541sdpprm6wb0"; depends=[]; }; + GauPro = derive2 { name="GauPro"; version="0.1.0"; sha256="01f8f3adki3g0aiw2km60w8sf78yj68aaj86bj8nizslgkj3z8ln"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; GeNetIt = derive2 { name="GeNetIt"; version="0.1-0"; sha256="102hq4w94gd7rz80cz1bll9kfblyacsk4h54yjflvqkmrs9x0d2b"; depends=[nlme raster rgeos sp spatialEco spdep]; }; GenABEL = derive2 { name="GenABEL"; version="1.8-0"; sha256="0sd497qvik70iwv7wc8r50rhc5wx153pm8vif738wwqqp43chks3"; depends=[GenABEL_data MASS]; }; GenABEL_data = derive2 { name="GenABEL.data"; version="1.0.0"; sha256="0p66fb0gynjx3mnfvnlz45cbn6xf49gwx9mfyxf584xfcggxaa1c"; depends=[]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.0-2"; sha256="1ps1rq8cjlwh658mysdh3xbn5fihanzcwxb38xvg4031vnwv80in"; depends=[]; }; - GenCAT = derive2 { name="GenCAT"; version="1.0.2"; sha256="1najc2261v7l1s2axax2cycz3x2b04hzxsnyq7877346z85sc5vc"; depends=[doParallel dplyr foreach ggplot2]; }; + GenCAT = derive2 { name="GenCAT"; version="1.0.3"; sha256="1rzhp4aypdryr7hrqazax3lzfkxqhls5cf8zsjjip8jb701x46hf"; depends=[doParallel dplyr foreach ggplot2]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; }; GenSA = derive2 { name="GenSA"; version="1.1.6"; sha256="1llhjhg39fd2pnm6kn8zjhw6kkg88wn7y3yizr8fna7qc3ixlcii"; depends=[]; }; GenWin = derive2 { name="GenWin"; version="0.1"; sha256="0jm537i4jn3azdpvd50y9p0fssfx2ym2n36d3zgnfd32gqckz3s4"; depends=[pspline]; }; + GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; }; GeneCycle = derive2 { name="GeneCycle"; version="1.1.2"; sha256="1ghdzdddbv6cnxqd08amy4c4s5jsxa637r828ygffk6z76xjr6b6"; depends=[fdrtool longitudinal MASS]; }; GeneF = derive2 { name="GeneF"; version="1.0"; sha256="0bizf47944b2zv9ayxb9rhrqx0ilz2xlvkw7x5vbg7l67y2g2l4d"; depends=[]; }; GeneFeST = derive2 { name="GeneFeST"; version="1.0.1"; sha256="0qgzjzhwf3nigfi09maywg9zkjxiicwiwiyqfcdk9gsvmp6mr4qn"; depends=[BASIX]; }; GeneNet = derive2 { name="GeneNet"; version="1.2.13"; sha256="0w52apk0nnr8nsskf26ff7ana8xiksr8wqmkjxzwhzgg7fncm61p"; depends=[corpcor fdrtool longitudinal]; }; GeneReg = derive2 { name="GeneReg"; version="1.1.2"; sha256="081qc66mb17dwk886x9l2z4imklxnfs02yqql0ri9c47bpsga7wp"; depends=[igraph]; }; - Geneland = derive2 { name="Geneland"; version="4.0.5"; sha256="1v2m8v4sy95rajjw8m9bg4yal5ay7x1k5kqjxrivm45ad546ykwh"; depends=[fields RandomFields]; }; + Geneland = derive2 { name="Geneland"; version="4.0.6"; sha256="0xm5k0ihmg8j0cx2as1h8lgm1g0vrfdbpb0nacmdqdhafaj03iyz"; depends=[fields RandomFields]; }; GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; + GeneralTree = derive2 { name="GeneralTree"; version="0.0.1"; sha256="0wlhpxky4vckmcg0imvcxsg2rg2pbrh5822lpkdp28aj7b4s7wqv"; depends=[R6]; }; GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-1"; sha256="0rx07z5npawvsah2lhhkryzpj19sg0sl0w410gmff985ksdn285m"; depends=[DistributionUtils RUnit]; }; - GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.6"; sha256="0y2wxpgrriyp4yighacszjd3k35j873z9cnqynjmcqi7l2li6rr4"; depends=[rrBLUP]; }; + GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GeneticTools = derive2 { name="GeneticTools"; version="0.3.1"; sha256="033dwg94ns4mz2ixgn180h6qd783gm492p9qs2nf8498cb4ycg9m"; depends=[gMWT plotrix Rcpp RcppArmadillo snpStats]; }; + GenomicTools = derive2 { name="GenomicTools"; version="0.2.3"; sha256="1ga2myi2y5rpab0v58y1ndfqrxmbl1wdr3d0s8215apwiax4rfm4"; depends=[circlize data_table gMWT Rcpp RcppArmadillo snpStats stringr]; }; GeoBoxplot = derive2 { name="GeoBoxplot"; version="1.0"; sha256="164dh49ac3fx38fdglv32lmz92ca8jdd98cbhz6mxsk8r0jcladw"; depends=[]; }; GeoDE = derive2 { name="GeoDE"; version="1.0"; sha256="0wawkzj0344pprm8g884d7by8v74iw96b109rgm7anal48fl30im"; depends=[MASS Matrix]; }; GeoGenetix = derive2 { name="GeoGenetix"; version="0.0.2"; sha256="0rrc8rdf6whpd830s2g9ybz82jcd0il9kkfrjh3xza3b86fasdvg"; depends=[RandomFields]; }; GeoLight = derive2 { name="GeoLight"; version="2.0.0"; sha256="1i49hyj3f5rcw0s6j2csnfwc6mnp5zn44vxjnk05wdkpw6dpvx5i"; depends=[changepoint fields maps MASS]; }; GeoXp = derive2 { name="GeoXp"; version="1.6.2"; sha256="18wdmdwb79ipdjdii068dz9f55b5ldxn95g5q6jcxsqwp0wldvw8"; depends=[KernSmooth quantreg rgeos rgl robustbase spdep splancs]; }; + GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; + GerminaR = derive2 { name="GerminaR"; version="1.0"; sha256="10zwa5grkz95q69l8yvvcj071lql7hh7f7cbmjxl1vnsyanlan4x"; depends=[agricolae assertthat dplyr ggplot2 gtools magrittr shiny tidyr]; }; + GetHFData = derive2 { name="GetHFData"; version="1.2.4"; sha256="0bhrxxrmhmvpks81n9xxzcwgp370ym7sxz6x7cnv50gzyd1yz9sm"; depends=[curl dplyr lubridate RCurl readr stringr]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; - GetoptLong = derive2 { name="GetoptLong"; version="0.1.1"; sha256="05fwlzzjnl84rv6r2hlqkhhg1y0d4yxmk5w4fpxfc7lpz2zi3zcd"; depends=[GlobalOptions rjson]; }; + GetTDData = derive2 { name="GetTDData"; version="1.2.5"; sha256="0ghi9iram9d67vs12hkw362qnvmk1lk72pjgmx118i4yxh5gvvw3"; depends=[curl RCurl readxl stringi stringr]; }; + GetoptLong = derive2 { name="GetoptLong"; version="0.1.5"; sha256="109x6m904x1cnqb9d0s4yglx6lfllhpdzl6is5d559bfsb990vwd"; depends=[GlobalOptions rjson]; }; GiANT = derive2 { name="GiANT"; version="1.2"; sha256="0h9jx2vpgpzlinf6v9mxj260r22nlqml8xnd2jknw36j5imim57w"; depends=[]; }; + GiNA = derive2 { name="GiNA"; version="1.0.1"; sha256="0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw"; depends=[doParallel EBImage foreach png]; }; GiRaF = derive2 { name="GiRaF"; version="1.0"; sha256="02356cq0g6v5m72fy5z83bw3nsb7kpc9sy7sykk97735n928z92n"; depends=[BH Rcpp RcppArmadillo]; }; GibbsACOV = derive2 { name="GibbsACOV"; version="1.1"; sha256="1ikcdsf72sn1zgk527zmxw3zjhx0yvkal6dv001cgkv202842kll"; depends=[MASS]; }; GillespieSSA = derive2 { name="GillespieSSA"; version="0.5-4"; sha256="0bs16g8vm9yrv74g94lj8fdfmf1rjj0f04lcnaya7gyak3jhk36q"; depends=[]; }; - GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0"; sha256="0dd4w7b3l9i78c9qvw2akz3h8annknbpfd3f56bgyw3gcfdrrz0x"; depends=[]; }; + GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; Giza = derive2 { name="Giza"; version="1.0"; sha256="13nkm8mk1v7s85kmp6psvnr1v97vi0gid8rsqyq3x6046pyl5z6v"; depends=[lattice reshape]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; - GlobalFit = derive2 { name="GlobalFit"; version="1.0"; sha256="0cx4jpr5yhjdqbvnswqjwx7542mnmk73dy99klwg8bsz0c36ii5k"; depends=[sybil]; }; - GlobalOptions = derive2 { name="GlobalOptions"; version="0.0.9"; sha256="1c08rfy8vxay4zrf91r7cxf70w3g35c7mxc6k9wkc2y948jnpj7i"; depends=[]; }; - Gmisc = derive2 { name="Gmisc"; version="1.3.1"; sha256="1gwg1600nyabrs6j721246cnrk9ishj7sc904mqxlbgcp5dxp4s1"; depends=[abind forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown XML]; }; + GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; + GlobalOptions = derive2 { name="GlobalOptions"; version="0.0.10"; sha256="0vkfr29q92g02138g2iscn95g3dc3shvzlmrh502fw89asm7kh57"; depends=[]; }; + Gmedian = derive2 { name="Gmedian"; version="1.2.3"; sha256="0b2ijr9zlsp1287da3h9qm5cm17xk8zm8cdcj6d4kz0ivgg444py"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; + Gmisc = derive2 { name="Gmisc"; version="1.4.1"; sha256="1xdgmvzixc03qz34l57gy85w711iimmfqn6w20rr5b67m5m63drz"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown XML]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-0"; sha256="17jd1dqwpki4mmzk695g25vvfwvkp4k7jhvw06dmdmn5j09hw373"; depends=[KernSmooth]; }; - Goslate = derive2 { name="Goslate"; version="1.0"; sha256="1pccrpvav5mbh52vdsqvdrshdaa4wvb7m0wc7lkd82k4661fa1qc"; depends=[PythonInR R6]; }; - Grace = derive2 { name="Grace"; version="0.2"; sha256="1ra1k0mpzcss3n5npqlphr1vl69c6x4c47agc7qxrzarryhk973w"; depends=[glmnet scalreg]; }; + GofKmt = derive2 { name="GofKmt"; version="1.0"; sha256="1b91js02kam515p7s0c6v63rl31wk16bvkr4f4z25wa5nb8g8p81"; depends=[Rsolnp]; }; + GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.2"; sha256="1qwarachkhc2yvjyxfcfbgjc1x9ni5xb7f93zviv8mz3c35bhs3b"; depends=[classInt corrplot]; }; + Grace = derive2 { name="Grace"; version="0.5.1"; sha256="1bx2bqfxxgq5dq9825iad5zgjxx3b2lgw18lzc1fxq5rnximsh08"; depends=[glmnet MASS scalreg]; }; GrammR = derive2 { name="GrammR"; version="1.1.0"; sha256="1rwvgznfxp7d3rzymyljj3pn3z3ggia1bhi4nvpgd79qd4cifi2g"; depends=[ape cluster GUniFrac gWidgets gWidgetsRGtk2 MASS rgl RGtk2]; }; - GrapheR = derive2 { name="GrapheR"; version="1.9-85"; sha256="16x1j3nfkcjszbfp9j3vg5sprdz5991f7j7v14cdwypcyl35yghh"; depends=[]; }; + GraphFactor = derive2 { name="GraphFactor"; version="1.1"; sha256="1jxibd2d5b6vlq27m9ppmm96wsnkqn4pz66n9pwdl8wg2v85npw5"; depends=[igraph]; }; + GraphKit = derive2 { name="GraphKit"; version="0.4"; sha256="12h7p1ka4036d3c1vri014jci02zkjgira6rk8f1mcrv94sywinc"; depends=[Rcpp RcppArmadillo]; }; + GrapheR = derive2 { name="GrapheR"; version="1.9-86"; sha256="1iizknyrpgiz1fh1fjls58n5v5fpki25j7kfbwfkp5ijf1q54ml6"; depends=[]; }; GrassmannOptim = derive2 { name="GrassmannOptim"; version="2.0"; sha256="05r5zg4kf3xd6pp56bl8ldchdxvspxkdfd33b623hndjhn4lj2lq"; depends=[Matrix]; }; - Grid2Polygons = derive2 { name="Grid2Polygons"; version="0.1-5"; sha256="18hgyx8a75allldsc2ih5i1p7ajkwj2x020cfd2hp18zrc4qyp5n"; depends=[rgeos sp]; }; + GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.0"; sha256="00a2lcqrj17ckw4npkvm3sxydfn2lyvs7pzpccy3xnzrr006ibsx"; depends=[rJava]; }; + Greg = derive2 { name="Greg"; version="1.2"; sha256="19bzv2nknahzbdnl7n0pcnavsdlwgkprc0yk3ksqllfawnvi39f9"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; + Grid2Polygons = derive2 { name="Grid2Polygons"; version="0.1.6"; sha256="1dgyif5hgjk4jir01pbsmsffn2dhmcci2smvk6vryq0iii3ixwaf"; depends=[raster rgeos sp]; }; GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; - GroupSeq = derive2 { name="GroupSeq"; version="1.3.3"; sha256="0abb18w9jylb1nf6yc6xic6b01f8zfxsm8hsmxk4whivn17ckfp9"; depends=[]; }; + GroupSeq = derive2 { name="GroupSeq"; version="1.3.4"; sha256="0m127793gh00spj2ghapmysvf3dbxhpf2jlms3xxrflh7ajrmy5m"; depends=[]; }; GroupTest = derive2 { name="GroupTest"; version="1.0.1"; sha256="1v2230mw0irsr5y8n45g8sd362jp7f6dy2r532mhflfdqy6i2khs"; depends=[]; }; - GsymPoint = derive2 { name="GsymPoint"; version="1.0"; sha256="0wcscyrkxl1sxhzgm35x2zh94lmnhvj16x77k9vhscc7j8as5d90"; depends=[Rsolnp truncnorm]; }; - GuardianR = derive2 { name="GuardianR"; version="0.6"; sha256="154fp4dx14v43c8ch6b7jaxwwnb0fgqiihm9m4qjywhqm8ask6na"; depends=[RCurl RJSONIO]; }; + GrowingSOM = derive2 { name="GrowingSOM"; version="0.1.1"; sha256="0pzhf27kk9nc73w6wp0qd50i7hk7904y90l2ppdgy738z9gcbz4i"; depends=[plotrix]; }; + GrpString = derive2 { name="GrpString"; version="0.1.1"; sha256="0kqz2m6ycj83s5kcgbf7l6cpfgfrza7b0y23cgljf952pys2ndys"; depends=[plyr]; }; + GsymPoint = derive2 { name="GsymPoint"; version="1.1"; sha256="0dps7mwq17y4fd64if2d99pr38y2wn3mksv3nsijysj0bhiwzh11"; depends=[ROCR Rsolnp truncnorm]; }; + GuardianR = derive2 { name="GuardianR"; version="0.8"; sha256="07bg7wz7d2rgjkw5ldzi5p7nd4ch39m6ql5w4sqnvds4r08jspj9"; depends=[RCurl RJSONIO]; }; Guerry = derive2 { name="Guerry"; version="1.6-1"; sha256="1hpp49w2kd1npsd709cwg125pw6mrqxfv2nn3lcs1mg2r49ki2bl"; depends=[]; }; GxM = derive2 { name="GxM"; version="1.1"; sha256="02rv8qb46ylk22iqn9cgh63vkyrg9a8nr1d0d3j5hqhi0wyhc41r"; depends=[minqa nlme Rcpp]; }; - HAC = derive2 { name="HAC"; version="1.0-4"; sha256="1cywcrj1iz46p2l0f99msgbipicc53ly5j5mzpaspq8wn8f4fwf0"; depends=[copula numDeriv]; }; + HAC = derive2 { name="HAC"; version="1.0-5"; sha256="0dc79qjhyydq0k4d8wvg970hs56i9yhxjrh5ky9a178ya61vw208"; depends=[copula numDeriv]; }; HAP_ROR = derive2 { name="HAP.ROR"; version="1.0"; sha256="1id9amz1cc2l2vnpp0ikbhf8ghbgzqd1b9dfivnyglg7996c3gbg"; depends=[ape hash]; }; HAPim = derive2 { name="HAPim"; version="1.3"; sha256="03qy0pxazv3gdq3fck7171ixilb9zi1dwnvc4v7d726g0lvn80pg"; depends=[]; }; + HARtools = derive2 { name="HARtools"; version="0.0.5"; sha256="10a92jsk1ccgxi5g6byrs4fbj5l2kih7vhib0jg6spdqi6rhqla1"; depends=[assertthat htmltools htmlwidgets jsonlite magrittr]; }; HBSTM = derive2 { name="HBSTM"; version="1.0.1"; sha256="0bx7dxcfj46k4kqpqb39w4qkm4hvr1ka8d8rws445vkyl31kr0q6"; depends=[fBasics maps MASS]; }; HBglm = derive2 { name="HBglm"; version="0.1"; sha256="1sral7lh5qw5mn31n8459pk52frgw1bjq0z5ckpsnbc4qf3xxcjn"; depends=[bayesm Formula MfUSampler sns]; }; + HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; HDGLM = derive2 { name="HDGLM"; version="0.1"; sha256="0a5lnh3780lsczj8339sp97c5y64a2gsdf77i56fvpxpphq0dnf8"; depends=[]; }; - HDInterval = derive2 { name="HDInterval"; version="0.1.2"; sha256="02rjqja2bcxc97hb6fg2xjxxkljsdv0g84qww39jq1pvgkswmm4g"; depends=[]; }; + HDInterval = derive2 { name="HDInterval"; version="0.1.3"; sha256="1zjddw8s6xc2gsz6285g3dzzarnhb77sra1dbxghgn2nrgn2y0i5"; depends=[]; }; HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; HDPenReg = derive2 { name="HDPenReg"; version="0.93.1"; sha256="1av4x9xqf4y1qfdkh9f0msskj9fqimng1i9bdlgl2ycfn8a64cjp"; depends=[Matrix Rcpp rtkore]; }; - HDclassif = derive2 { name="HDclassif"; version="1.3"; sha256="1b80dnaa6m4px0ijpd9yf45v8jl0b9srcmrdyar8fs7lxpc53k2l"; depends=[MASS]; }; + HDclassif = derive2 { name="HDclassif"; version="2.0.2"; sha256="0gykjqqhrqz1x9xl867hxhrp197y3x4679zh9v84i1nd9yxlamah"; depends=[MASS rARPACK]; }; + HDoutliers = derive2 { name="HDoutliers"; version="0.15"; sha256="01ylj4wnhqy8931lkhdgx552kv1h7hl4ngkpqbnhq75amyh34c46"; depends=[FactoMineR FNN mclust]; }; + HDtest = derive2 { name="HDtest"; version="0.1"; sha256="0vlwpx9l6r0izfcf9fgna72w39w64b95s3q527mapjb6a3676avg"; depends=[checkmate doParallel expm foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; HEAT = derive2 { name="HEAT"; version="1.2"; sha256="1qifqd06ifl0f5l44mkxapnkwhpm0b82yq6dhfw4f8yhb27wd0z2"; depends=[]; }; - HGNChelper = derive2 { name="HGNChelper"; version="0.3.1"; sha256="0vidw7gdvr0i4l175ic5ya8q2x2jj0v2vc7fagzrp2mcy7fn1y6a"; depends=[]; }; - HH = derive2 { name="HH"; version="3.1-25"; sha256="0lrli7rci0m9xb3fx51m59mcikyfhzsjmjp5s59ilahz70gkxnnw"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; - HHG = derive2 { name="HHG"; version="1.5.1"; sha256="111b3lqkp8z7m3g4vgmd0dcplkm4szfwa620sxy70084qad1jv4d"; depends=[]; }; + HGNChelper = derive2 { name="HGNChelper"; version="0.3.4"; sha256="09wwhi8qwmzcwsivnms9zjl4xmbbg0dnx5aj9a2fqaa06m4kd6pk"; depends=[]; }; + HH = derive2 { name="HH"; version="3.1-34"; sha256="1srr195ha8n4va30impm12p2kamkl36whl8g10pl80hwgg20pbqk"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; + HHG = derive2 { name="HHG"; version="2.0"; sha256="1y6w62ivbhqpl6zgwpxq9r2w5nlc70zj8f7rnnhck162p6hyp778"; depends=[]; }; HI = derive2 { name="HI"; version="0.4"; sha256="0i7y4zcdr6wcjy43lz9h8glzpdv0pz7livr95xb1j4p8zafykday"; depends=[]; }; + HIBPwned = derive2 { name="HIBPwned"; version="0.1.3"; sha256="121rs767h9c7ngkbnbfv8zl7jjzimw68z9gwbz0dc0z8w3h3mq5y"; depends=[httr jsonlite urltools]; }; HIV_LifeTables = derive2 { name="HIV.LifeTables"; version="0.1"; sha256="0qa5n9w5d5l1kr4827a34581q380xmpyzmmhhl300z1jwr0j94df"; depends=[]; }; HIest = derive2 { name="HIest"; version="2.0"; sha256="0ik55kxhzjyg6z6072iz9nfaj7x1nvf91l1kysgvkjccr6jf3y86"; depends=[nnet]; }; - HK80 = derive2 { name="HK80"; version="0.0.1"; sha256="1qhknrqpspxrdxzf5kakans94db58bbhgpblvpwcyw4jrjmm0ng7"; depends=[]; }; + HK80 = derive2 { name="HK80"; version="0.0.2"; sha256="0c8scpzl5xgqm9rlsvh5nl3bz42i5pzvb873j9bn3bi15gcknbny"; depends=[]; }; + HKprocess = derive2 { name="HKprocess"; version="0.0-2"; sha256="1j2yhb7k8zf4nlzdf0p6x9ca7ak4lwwak8mcc60kpilw2fws27k5"; depends=[gtools MCMCpack]; }; HLMdiag = derive2 { name="HLMdiag"; version="0.3.1"; sha256="02pgvfyj3xpy7laxryqivsws8jl3m79fwfzpqj8ad794a06gh87g"; depends=[ggplot2 MASS Matrix mgcv plyr Rcpp RcppArmadillo reshape2 RLRsim]; }; - HLSM = derive2 { name="HLSM"; version="0.5"; sha256="0j1jfnm5lydlcjdbb31jd514is5brvfzrx8h4ckw4p7xa4syg08s"; depends=[coda MASS]; }; + HLSM = derive2 { name="HLSM"; version="0.7"; sha256="0cj4mbg7vamlabxynik59n5l3w5fiwa84qypprr8wr7ms2aimfa0"; depends=[coda igraph MASS]; }; HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.1.8"; sha256="15z0war5isw9xnln7py3di8f45pwvdw6x6wljl18fcxpmanmlfcf"; depends=[RCurl XML]; }; HMM = derive2 { name="HMM"; version="1.0"; sha256="0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw"; depends=[]; }; HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; }; @@ -972,100 +1216,127 @@ in with self; { HMP = derive2 { name="HMP"; version="1.4.3"; sha256="15fsyk61y141wdkc5cjrw05gc5kzl2a8cmk2n54c8gmhhjbjy692"; depends=[dirmult doParallel foreach gplots MASS]; }; HMPTrees = derive2 { name="HMPTrees"; version="1.3"; sha256="1q0zfwhzfr45mykql8hsp6pzkfhcplr7gkq7dbd8xa97wxsf63yd"; depends=[ape dirmult doParallel foreach HMP]; }; HMR = derive2 { name="HMR"; version="0.4.1"; sha256="1acaph5q6vgi4c7liv7xsc3crhp23nib5q44aszxhramky0gvaqr"; depends=[]; }; + HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; }; HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; - HRM = derive2 { name="HRM"; version="0.1"; sha256="12pjsy9hx0sz42czfwvsla6pyp85as4pf2hhvbh0yp07wwfs2f3i"; depends=[MASS matrixcalc]; }; - HSAR = derive2 { name="HSAR"; version="0.3.6"; sha256="1f4n65gbql1kaqf1izbh4ngqsv36ccypy7n40rlc5fi0hjxsff23"; depends=[Rcpp RcppArmadillo spdep]; }; + HRM = derive2 { name="HRM"; version="0.4.3"; sha256="1g6kka2havns39c2m3ynq3k2zfl5vjvrf2xhhr3xhfd1p4sl0c6g"; depends=[ggplot2 MASS matrixcalc plyr reshape2]; }; + HRQoL = derive2 { name="HRQoL"; version="1.0"; sha256="1gr9rhr8gdnh7bw2v3r0xc3yhmzrx2gzgsd8wd5mmsp81ph0h5lz"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; + HSAR = derive2 { name="HSAR"; version="0.4.0"; sha256="1k40hh546hrdm2yh64l51sky17mnmkzckb7l3bnkpw495rsk73g2"; depends=[Rcpp RcppArmadillo spdep]; }; HSAUR = derive2 { name="HSAUR"; version="1.3-7"; sha256="16qmsyin8b7x9q3xdx74kw6db6zjinhxprp6pfnl6ddwxhz3jzzf"; depends=[]; }; HSAUR2 = derive2 { name="HSAUR2"; version="1.1-14"; sha256="0psykccxyqigkfzrszy7x3qhdw02kppzgz0bqr21q8zh51jb2y3v"; depends=[]; }; HSAUR3 = derive2 { name="HSAUR3"; version="1.0-5"; sha256="0hjlkmxp1yhwkfcbx16nda96ysqddjrcvl4z52w2ab84prqn6196"; depends=[]; }; HSROC = derive2 { name="HSROC"; version="2.1.8"; sha256="056g6iygrddmpmg5nnilqrlw2xavmcc9q07z942vc2nivw06h346"; depends=[coda lattice MASS MCMCpack]; }; HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; - HTSCluster = derive2 { name="HTSCluster"; version="2.0.4"; sha256="1kvq118hqxc81n88g4bq10lh84dydrqqhzig246wf3f97ajvq7y0"; depends=[capushe edgeR plotrix poisson_glm_mix]; }; + HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; + HTSSIP = derive2 { name="HTSSIP"; version="1.0.3"; sha256="09cid6zma00adxf03p0iydfpq9xrds72a174aa7dbwgvsbzqh4p0"; depends=[coenocliner DESeq2 dplyr ggplot2 lazyeval magrittr phyloseq plyr stringr tidyr]; }; HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; }; HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; }; HWEBayes = derive2 { name="HWEBayes"; version="1.4"; sha256="1rbffx6pn031a278ps9aqxcaq8yi73s5kf60za143ysbfxv9dphw"; depends=[MCMCpack mvtnorm]; }; HWEintrinsic = derive2 { name="HWEintrinsic"; version="1.2.2"; sha256="035r5bi7m66g351cmrfmf4cj5qqm4fn5pgy3lzsp3gyp2dv0rkg5"; depends=[]; }; HWxtest = derive2 { name="HWxtest"; version="1.1.7"; sha256="030fl88bj0g7y9b9kd56bnxh0cad6y84bnmvsgwlanb51n3ggz3w"; depends=[]; }; HadoopStreaming = derive2 { name="HadoopStreaming"; version="0.2"; sha256="1l9msaizjvnsj1jrpghj4g057qifdgg6vbqhfxhn1fiqdqi2056q"; depends=[getopt]; }; - HandTill2001 = derive2 { name="HandTill2001"; version="0.2-11"; sha256="1vv3vm1hlfibgw84y52nzb5a66jigbmx3611lf4kmqfl1y4wm3rg"; depends=[]; }; + HandTill2001 = derive2 { name="HandTill2001"; version="0.2-12"; sha256="1rijjv27zwdznznvwlb5hahixmfxayr6vs11p1mzwqma8qhsn5ak"; depends=[]; }; Hankel = derive2 { name="Hankel"; version="0.0-1"; sha256="0g3b0ji8hw29k0wxxvlnbcm0z91p4vbajbrhm6cqbccjq85lg4si"; depends=[]; }; HapEstXXR = derive2 { name="HapEstXXR"; version="0.1-8"; sha256="00p8pziy8q6vki7brpd57c7ckc9zw41c90h47yp9vb3ndanfqavp"; depends=[survival]; }; - Haplin = derive2 { name="Haplin"; version="5.5"; sha256="12wkj5x1s920xs0xzhxk0dswmwan7x20fw5sj6cx29n013h1gkam"; depends=[DatABEL GenABEL MASS mgcv snow SuppDists]; }; + Haplin = derive2 { name="Haplin"; version="6.0.1"; sha256="1hdni0ni7qbhcwg7ficv09dxj20cavyzijwdc2vk41smdsm9gg9i"; depends=[DatABEL GenABEL MASS mgcv snow SuppDists]; }; HaploSim = derive2 { name="HaploSim"; version="1.8.4"; sha256="0794f76hc9qvjmay7c61cmzycqafljs0g0hliq9xfrw4f23gq3sa"; depends=[]; }; - HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.5"; sha256="1kz12301bi2880i9ds7wvc6yb5hvrs3fr5689fm1yygkqfq8zc56"; depends=[mice]; }; + HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.5.6"; sha256="1zpba8l8fjc7ncrw0virfv1s9zaa4xsyn63jiay8ivik98siqhkb"; depends=[mice]; }; HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; - HelpersMG = derive2 { name="HelpersMG"; version="1.4"; sha256="1wi74b58ya9395wqk3hgs7nddd6mpamal9258gf2wy0s57wmcwr7"; depends=[coda]; }; - HiCfeat = derive2 { name="HiCfeat"; version="1.0"; sha256="0azr6n792dmkg12ynr3nybmb33z8rv046lv0hfwpyybz6p8dj3zq"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; + HelpersMG = derive2 { name="HelpersMG"; version="1.8"; sha256="1lw0p02rzb4b9b66435w8dr058bfzpcygfgi75av28lrc75c6skv"; depends=[coda]; }; + HeritSeq = derive2 { name="HeritSeq"; version="1.0.0"; sha256="0ibb2nkjk1d59gc1ljihihsjai3jp4jsbbariv05h1z26pgpc9p3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; + HiCfeat = derive2 { name="HiCfeat"; version="1.2"; sha256="01b8isvn4my41n3608k80d38vgd3waq7rxsx1v4p0rl1f3pxn7dn"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; + HiCglmi = derive2 { name="HiCglmi"; version="1.0"; sha256="01v7g9h86xb4i8gc2rsyyx952mqafyapydhyyik098s1war4hkf9"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; HiClimR = derive2 { name="HiClimR"; version="1.2.3"; sha256="1yv01pyfmgq306f3yravwf6sm79m0m93gpya95k85rxqdjl3c2hx"; depends=[]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; HiDimMaxStable = derive2 { name="HiDimMaxStable"; version="0.1.1"; sha256="0gscdjm48yyf8h3bn6xjbjlfc1hwbbh5j6v64c0z3d04h9q35c24"; depends=[copula maxLik mnormpow mnormt partitions VGAM]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; HiPLARM = derive2 { name="HiPLARM"; version="0.1"; sha256="0af68gfmc89nn1chmqay6ix0zygcp1hmylj02i7l6rx6vb06qw6w"; depends=[Matrix]; }; - HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-4"; sha256="1w3j4dnf6ay0a17kn8zdzy38wind4pqfnwlndf9m9fj8m2scaay8"; depends=[]; }; + HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-7"; sha256="03fs51l3xxks0dqhl6w5m34djbpkly92bvbm23y3wj3zrxz3d2ml"; depends=[]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; - HistDAWass = derive2 { name="HistDAWass"; version="0.1.4"; sha256="00jdfv3ij9v431wm1grib9pcr9nfn42r2hjvjj12b61r2v7j2b1n"; depends=[class FactoMineR ggplot2 histogram]; }; - HistData = derive2 { name="HistData"; version="0.7-6"; sha256="1wazqpgjzl5x2whn9v54yx83xw0pd0l03h6rqv6dp25xizxlxw0v"; depends=[]; }; + HistDAWass = derive2 { name="HistDAWass"; version="0.1.6"; sha256="0i43zki95m47nm3yy7m7s66nvpmx6vl3df2bxkpyihc2xsqrsf3l"; depends=[class colorspace FactoMineR ggplot2 histogram]; }; + HistData = derive2 { name="HistData"; version="0.8-1"; sha256="018v8wr95fssc5hzfwzk7x8pax2s41m22a7lvcpy0chy0nvh7dqh"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; - HiveR = derive2 { name="HiveR"; version="0.2.46"; sha256="1zc1vjb975y9icw9vq65f27nrj2n3c5lgms0alflj837b5zvbhqd"; depends=[jpeg plyr png RColorBrewer]; }; - Hmisc = derive2 { name="Hmisc"; version="3.17-2"; sha256="110w5hbrl10isslqs0iq6w2ll0dafqyqznb50cdcallnlnvbvxrg"; depends=[acepack cluster foreign Formula ggplot2 gridExtra gtable lattice latticeExtra nnet rpart survival]; }; - Holidays = derive2 { name="Holidays"; version="1.0-6"; sha256="031vddjf7s3pirv041y2mw694db63gjajlbczmmya8b1zp2f3vzk"; depends=[TimeWarp]; }; + HiveR = derive2 { name="HiveR"; version="0.2.55"; sha256="14hdnpiw0ccmzb0lj9gwn92hzwwmlpgrxv7mj8kwp89n7kqccvl7"; depends=[jpeg plyr png RColorBrewer]; }; + Hmisc = derive2 { name="Hmisc"; version="4.0-2"; sha256="1lg9k0kj803wsm3h0a991q9l2lrgsqryzfv2z79b88kjbfapqpqr"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + HoRM = derive2 { name="HoRM"; version="0.1.0"; sha256="07vq8v1pdmm35sna9yz7n6al4g9mf45sx1rbzgsymyjac38zw62k"; depends=[ggplot2 MASS orthopolynom quantmod]; }; + Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; + Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; HomoPolymer = derive2 { name="HomoPolymer"; version="1.0"; sha256="1bxc33dx9y9rr9aii4vn9d1j9v5pd4c0xayfdldz8d9m2010xr4a"; depends=[deSolve MenuCollection RGtk2]; }; HotDeckImputation = derive2 { name="HotDeckImputation"; version="1.1.0"; sha256="1mqfn6yw5846ynrcgzka0m6ikfppa5civjkhj42rhp2v2xk25li7"; depends=[Rglpk]; }; Hotelling = derive2 { name="Hotelling"; version="1.0-2"; sha256="0dzsqnn4c4av23qjnmacwc78i0xg355p1xwfmgipr04ivym0mqn0"; depends=[corpcor]; }; HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; - HydeNet = derive2 { name="HydeNet"; version="0.10.3"; sha256="0v3mkpyw2qfi3kywlpvr01vdvi78xcq2v43g90jrihzqrvrd6lm3"; depends=[ArgumentCheck DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; }; + HydeNet = derive2 { name="HydeNet"; version="0.10.5"; sha256="00h7lj347nag5m5nfyv1hgaml77kqlcxrl704mq6791fcjdchgp1"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; }; HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; + IAPWS95 = derive2 { name="IAPWS95"; version="1.0.0"; sha256="1rw6i3a653m11fyza42jhbqi6607fiqgmq15qfn5bqhq8sdgmn9p"; depends=[ggplot2 pander Rcpp]; }; IASD = derive2 { name="IASD"; version="1.1"; sha256="1slhd42k639mbyxccl7n69p7ng2qx6pqag8wz3kdwn479spkavzn"; depends=[]; }; - IAT = derive2 { name="IAT"; version="0.2"; sha256="0byivq2298sjvpsz5z1w7r31h6z2jqpip40z8r2alygbgwwa48pd"; depends=[data_table ggplot2]; }; + IAT = derive2 { name="IAT"; version="0.3"; sha256="110rn2q09gspfd4msyh30dllxdxdraffkr18h1nm72brzhmx9cfi"; depends=[dplyr ggplot2 lazyeval]; }; IATscores = derive2 { name="IATscores"; version="0.1-2"; sha256="0grl5m4ccwaxvhg1bziy3vv5jffkvr24z268ws5m4ia20haif0dm"; depends=[dplyr nem qgraph reshape2 stringr]; }; IBDLabels = derive2 { name="IBDLabels"; version="1.1"; sha256="1m9fd058yjxva6hin7i72i2nl285wfm0jkdn5xcng27yqlijyrm9"; depends=[]; }; IBDhaploRtools = derive2 { name="IBDhaploRtools"; version="1.8"; sha256="1754239pdil6b383mpzyi8zb9l9hzg15dwgn5246v97g1y3mlp5r"; depends=[]; }; - IBDsim = derive2 { name="IBDsim"; version="0.9-5"; sha256="0mhn1byrx98892gy30dar69pp3cnfwpzkl86gzqyjcxa2d9zpc77"; depends=[paramlink]; }; + IBDsim = derive2 { name="IBDsim"; version="0.9-6"; sha256="19dq85qcvcjpfj7lh9h5ld6wm9xrz6zyl2nkpfvh1icwbcqncbxx"; depends=[paramlink]; }; IBHM = derive2 { name="IBHM"; version="1.1-11"; sha256="1m0zxlybcak2v5c4spgaa39ngb2hryak4xd875jryk1dcnk9c702"; depends=[cmaes DEoptim Rcpp]; }; IBrokers = derive2 { name="IBrokers"; version="0.9-12"; sha256="0mhh4kgwrncrcysvnvah6xc7fhx5ywjzn258cs9xj9kzns0jblk6"; depends=[xts zoo]; }; IC2 = derive2 { name="IC2"; version="1.0-1"; sha256="03jjb62msxjxdg9l3zd1ns0d2w37hkxy5pnjgaywxw3vfk4zwfj9"; depends=[]; }; ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; }; + ICAOD = derive2 { name="ICAOD"; version="0.9.2"; sha256="12fkcc2ii3652n8ihzm29f9gip790wdmil7c1bzd5ma4l959w7hy"; depends=[nloptr Rcpp RcppEigen Rsolnp]; }; ICBayes = derive2 { name="ICBayes"; version="1.0"; sha256="0z0z74yslhfjbh7188hzyxhwb7kn9raa0xsrr6n592ridpkhaih4"; depends=[HI survival]; }; ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; }; ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; + ICCbin = derive2 { name="ICCbin"; version="1.0"; sha256="1ybhxk5bvgfsz45r1kbb8b82qwjb8a88q11x5c4dbdk85fkxg3w9"; depends=[]; }; ICE = derive2 { name="ICE"; version="0.69"; sha256="04p8lakaha28mdh965w0ppyxfrz5ssi1n9xifvsbn3ihdra67rip"; depends=[KernSmooth]; }; - ICEbox = derive2 { name="ICEbox"; version="1.0"; sha256="1m3p0b93ksrcsp45m4gszcz01cwbfpj4ldar6l0q3c9lmyqsznx8"; depends=[sfsmisc]; }; + ICEbox = derive2 { name="ICEbox"; version="1.1"; sha256="0yv9ybvk6s3lnyx5xfsnx19x32r9g9gk7klkpc8q672pl4fn4yp5"; depends=[sfsmisc]; }; ICEinfer = derive2 { name="ICEinfer"; version="1.0-1"; sha256="0gjgr1r33w6d5ra0njh15lj46lw6v751yl8iqrdf4a5pazs7w3lm"; depends=[lattice]; }; ICGE = derive2 { name="ICGE"; version="0.3"; sha256="0xin7zml1nbygyi08hhg3wwr2jr1zcsvrlgia89zp4xanxlzgaqa"; depends=[cluster MASS]; }; - ICGOR = derive2 { name="ICGOR"; version="1.0"; sha256="1lgpgxi9ps0dnxllc1095lvdaq5p0dz6w4daw2b7q6jk3m6v5cla"; depends=[ICsurv MASS pracma survival]; }; - ICS = derive2 { name="ICS"; version="1.2-5"; sha256="0q69rhb8an200yi564jzqbfb8b83l6xddqxhk8kw4g3y96jp82qx"; depends=[mvtnorm survey]; }; + ICGOR = derive2 { name="ICGOR"; version="2.0"; sha256="18fn10f5nqqbrfibqmp602nqpx794fy3gpxp1bd10xn48llhqfc4"; depends=[ICsurv MASS pracma survival]; }; + ICS = derive2 { name="ICS"; version="1.3-0"; sha256="0r5lf8km77h29lcpi7z0hkmy4vh0p5m7p2xbxsxj6w9hsgyanv72"; depends=[mvtnorm survey]; }; ICSNP = derive2 { name="ICSNP"; version="1.1-0"; sha256="1g7n8jlilg36hm989s5x18kf8jqn5wy98xi9jmnqkqpds4ff217y"; depends=[ICS mvtnorm]; }; + ICSOutlier = derive2 { name="ICSOutlier"; version="0.2-0"; sha256="1dxbh3qhirr7f2bv68g1xlya5fprm230fdgxhccrzdc0wh0ijh3i"; depends=[ICS moments mvtnorm]; }; + ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; - IDPSurvival = derive2 { name="IDPSurvival"; version="1.0"; sha256="1v1w0i74b065b4qc302xbdl5df7qx9z8jmbc9cn46fqm1hh2b6d7"; depends=[gtools Rsolnp survival]; }; + ICtest = derive2 { name="ICtest"; version="0.2"; sha256="0pd16cafhx7cfwasbdli0kin83wayn7hil8allpacv9yiinj2bq3"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey]; }; + IDPSurvival = derive2 { name="IDPSurvival"; version="1.1"; sha256="0vd2dkspsq8aqihjs7dqpfb1xk5ydnwqwzhhg142mywgf0zg2fkh"; depends=[gtools Rsolnp survival]; }; IDPmisc = derive2 { name="IDPmisc"; version="1.1.17"; sha256="0nbwdyg9javjjfvljwbp2jl0c6414c11zb2pirmm5pmimaq9vv0q"; depends=[lattice]; }; + IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.2.2"; sha256="0pfvdy82i5w6zrda2022m1v22dv2qsgcj1y7f8hqmaqvqgczizfk"; depends=[]; }; IDTurtle = derive2 { name="IDTurtle"; version="1.2"; sha256="15r806vk5lmvyclsynzq9qr8pgwwkxal1j6xcq6408i8kq1hk3fb"; depends=[]; }; + IDmining = derive2 { name="IDmining"; version="1.0.0"; sha256="112m9dpzq6dl055wf1hhnxqr0rfvm1dv75mbj60fdwlf5q4sgsia"; depends=[dplyr]; }; IFP = derive2 { name="IFP"; version="0.2.1"; sha256="06zyadcr8p6q0c5h9n29yl02ixysdj6lfbn9hfir0bk9hyv9yfyr"; depends=[coda haplo_stats]; }; - IGM_MEA = derive2 { name="IGM.MEA"; version="0.3.0"; sha256="1sxwccysmxv9cv34rgi3s777734a01hmxyr7x32bgykkhjq6wr25"; depends=[emdist ggplot2 gridExtra gtools lattice plyr reshape2]; }; + IGM_MEA = derive2 { name="IGM.MEA"; version="0.3.4.1"; sha256="093c7jx74hl41v6i75qlphshw6gbxn7cl9063f971ilxi4hmsd21"; depends=[emdist ggplot2 gridExtra gtools lattice plyr reshape2]; }; + IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; + ILS = derive2 { name="ILS"; version="0.1.0"; sha256="18phs1q28mpwvwnzn0hgjxy978f7n4c3p94jxjp0sy3as67hqphp"; depends=[depthTools fda_usc MASS multcomp]; }; IM = derive2 { name="IM"; version="1.0"; sha256="1f1vr5zfqnanc5xmmlfkjkvxwbyyysi3mcvkg95p8r687a7zl0cx"; depends=[bmp jpeg png]; }; + IMFData = derive2 { name="IMFData"; version="0.2.0"; sha256="1mlxpsbyvh1zi8ivdblbd58zfv5hflnknbasz5z8xk9911czrn6p"; depends=[httr jsonlite plyr]; }; + IMIFA = derive2 { name="IMIFA"; version="1.1.0"; sha256="0fxnyzh0403k97ka6ngwsbw9qnf0gnkq33xsb47vrlfx3558g57a"; depends=[abind corpcor e1071 gclus matrixcalc matrixStats mclust MCMCpack mvnfast plotrix Rfast slam viridis]; }; IMIS = derive2 { name="IMIS"; version="0.1"; sha256="09zb48vdj0i3vf8vxrs07xwb9ji27vp2fyvmg6jfq631licsryc2"; depends=[mvtnorm]; }; IMP = derive2 { name="IMP"; version="1.1"; sha256="0ilvgz2bngffyx6ifqqx1snsn6mmq7rx3wg44093yrviaw39qdfv"; depends=[dplyr ggplot2 shiny tidyr]; }; - IMak = derive2 { name="IMak"; version="1.1.1"; sha256="0s1pwpy9538gz108q74ld5azqskix4rk60bmr5qllpcqqhbwhrva"; depends=[]; }; - INLABMA = derive2 { name="INLABMA"; version="0.1-6"; sha256="0rij3y89yyj25xz8r9n8cnq7rg9b7hf0n9nxxrrnm86w3n4r66in"; depends=[Matrix sp spdep]; }; + IMPACT = derive2 { name="IMPACT"; version="0.1.0"; sha256="17m2gqwaqam8wv7214x4hp93imgfzilgm42zx5z21ipypiq6rqfy"; depends=[]; }; + IMak = derive2 { name="IMak"; version="1.1.2"; sha256="19si4hhvi8kddkp2kr1yw2bcw1qkk0i42saklvwk751gdmyzl9p3"; depends=[]; }; + INLABMA = derive2 { name="INLABMA"; version="0.1-8"; sha256="13r89r14xpihfqddwzkhxg4jgxyl59826x2insrall3mj2yffj90"; depends=[Matrix sp spdep]; }; + INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; IPSUR = derive2 { name="IPSUR"; version="1.5"; sha256="0brh3dx7m1rilvr1ig6vbi7p13bfbblgvs8fc114f08d90fczwnq"; depends=[]; }; + IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; }; IQCC = derive2 { name="IQCC"; version="0.6"; sha256="0gsnkdl4cfxzq6pm9g4i1g23mxg108j3is4x69id1xn2plf92m04"; depends=[MASS micEcon miscTools qcc]; }; - IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="1.0.1"; sha256="08jmkncz5nyjrcb07fgnv2siws6ihd1nzssq99bv5ab24v3krr0w"; depends=[IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; - IRISSeismic = derive2 { name="IRISSeismic"; version="1.0.7"; sha256="00qqg97kkc7yas7qiv6280rbjjdvmrp4w62kj0fps727hfbr6r51"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; + IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; + IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.0.4"; sha256="0in50k366yjqgpgzh73bfb8v6cqdrr68b8xvsa1jmi2f438j3nrx"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; + IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.1"; sha256="0h2r1yijc00va48zhvb9b0mnmw9b1anfhs9v8gjqyv4dy6l8lrif"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.1"; sha256="0izw7mk78b9ab2p6jb5vph80cjbaq0m6xvyw8xlzypa3j3ns17sv"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; + IRTpp = derive2 { name="IRTpp"; version="0.2.6.1"; sha256="10shzyiawk65pikawvhg58kx6fpvs1dazqmfjf3rfvly1lc0px1q"; depends=[FactoMineR MASS mvtnorm numDeriv Rcpp]; }; + IRdisplay = derive2 { name="IRdisplay"; version="0.4.4"; sha256="19l4flvik8zw2pany8dpjbrh0bji6bag6pmclgwqnq80532hnfp8"; depends=[repr]; }; ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; }; ISDA_R = derive2 { name="ISDA.R"; version="1.0"; sha256="0w6p2iy6s7fy8pw2cf4b5zhqcgjjwd5bkax1aqflaaj4ppmfx64v"; depends=[scatterplot3d]; }; ISLR = derive2 { name="ISLR"; version="1.0"; sha256="0gmhvsivhpq3x8a240lgcbv1qzdgf6wxms4svak1501clc87xc6x"; depends=[]; }; - ISOcodes = derive2 { name="ISOcodes"; version="2016.03.15"; sha256="05dbmah7daxqmmljb4hx2f2pz2yii3k9mpg6p30fbs5rkn84pfkw"; depends=[]; }; - ISOpureR = derive2 { name="ISOpureR"; version="1.0.18"; sha256="1hh23d4dzhkqli68466gs2n6zhlhwjl53dvrpqvl6ag6i4x974ag"; depends=[futile_logger Rcpp RcppEigen]; }; + ISOcodes = derive2 { name="ISOcodes"; version="2016.12.09"; sha256="1xsazjipx468hyqivdkskcqiipmysdzzrswh4yh6p41qbf1ahp6a"; depends=[]; }; + ISOpureR = derive2 { name="ISOpureR"; version="1.0.21"; sha256="093wvnh7fv9shvssgl8slfg394f0v0jazj4jpihhaqkfchq1vryy"; depends=[futile_logger Rcpp RcppEigen]; }; ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; + ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; ISwR = derive2 { name="ISwR"; version="2.0-7"; sha256="1rd1wrvl8wlc8ya5lndk74gnfvj9wp29z8617v3kbf32gqhby7ng"; depends=[]; }; ITEMAN = derive2 { name="ITEMAN"; version="1.0"; sha256="06blkqxdvdfynp8vl02rqbg7ya62bq1izlqjda1p8zpr689jinzk"; depends=[car ggplot2 polycor]; }; + ITGM = derive2 { name="ITGM"; version="0.4"; sha256="0vsf3hnqfz029n1skm54s9ynd8alqag963bircqg0psgl9x6jhvi"; depends=[data_table Fgmutils gsubfn plyr sqldf]; }; IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; }; IalsaSynthesis = derive2 { name="IalsaSynthesis"; version="0.1.6"; sha256="15iwywvzhgiyigl8f488b7ra89rz0a7ymfsdgdlqfls3fmld7b4a"; depends=[testit]; }; Iboot = derive2 { name="Iboot"; version="0.1-1"; sha256="1fahh86kgv2axj2qg14n87v888sc0kb567s6zr3fh5zv361phwkq"; depends=[]; }; @@ -1074,78 +1345,107 @@ in with self; { ImpactIV = derive2 { name="ImpactIV"; version="1.0"; sha256="1bb6gw1h15hscr71hy779k2x5ywzx63ylim3hby02d7fnnj46p58"; depends=[nnet]; }; ImportExport = derive2 { name="ImportExport"; version="1.1"; sha256="12i9mwspk59zicn1mn21xrs90c8dqxm1q7alqbzscgkpf3xbjrnn"; depends=[chron gdata haven Hmisc RODBC xlsx]; }; InPosition = derive2 { name="InPosition"; version="0.12.7"; sha256="1f7xb2kxikmja4cq7s1aiwhdq27zc6hghjbliqqpm8ci8860lb8p"; depends=[ExPosition prettyGraphs]; }; - InSilicoVA = derive2 { name="InSilicoVA"; version="1.1"; sha256="0zm0q82j5mdpjy7pa0dxx3291dh01q9c21gzjripmggb96fsg39d"; depends=[coda ggplot2 rJava]; }; + InSilicoVA = derive2 { name="InSilicoVA"; version="1.1.4"; sha256="16978c1bdxbp3xxrcnx8yyar1dd292a5i43qhcymdp7nnprd6gc7"; depends=[coda ggplot2 rJava]; }; + IncucyteDRC = derive2 { name="IncucyteDRC"; version="0.5.4"; sha256="1k7jqcyx5n4my5rbyfa693ganbk91xganyagq8x8szli9h1491ii"; depends=[cowplot dplyr drc DT ggplot2 magrittr shiny tidyr XML]; }; + IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; }; IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; }; - Information = derive2 { name="Information"; version="0.0.7"; sha256="1gri1szvwj4c27s7niz5ss8lws16q3sxxgaz7p9grcbhd5ky5apg"; depends=[data_table doParallel foreach ggplot2 iterators plyr]; }; - InformationValue = derive2 { name="InformationValue"; version="1.2.1"; sha256="0bbsix2w834jd64d1mgsjlbawrc73yykzd3zf5lwkfr5gka4k1ij"; depends=[ggplot2]; }; + InfiniumPurify = derive2 { name="InfiniumPurify"; version="1.3.1"; sha256="0yqah4rwpishas0xyv5a7cn4v18brj33cd7f494g21b9brggafq1"; depends=[matrixStats]; }; + InfoTrad = derive2 { name="InfoTrad"; version="1.1"; sha256="072280famiq6455mc3q00k9xw1jb534308am875ys1bplci63521"; depends=[]; }; + Information = derive2 { name="Information"; version="0.0.9"; sha256="0pszwzj3r7vdvdsy9w1qz95zxp7y2bsyg36b58mm4qcvcvymd4kn"; depends=[data_table doParallel foreach ggplot2 iterators plyr]; }; + InformationValue = derive2 { name="InformationValue"; version="1.2.3"; sha256="1b5g2wyp7x5cdhmf4325n3q7afa6i352lh80j28c8s4356pr3w9j"; depends=[data_table ggplot2]; }; + InformativeCensoring = derive2 { name="InformativeCensoring"; version="0.3.4"; sha256="145k4hggymra2jnxkcck795xk280yyldfzh9ls2irnsxmxfszr52"; depends=[boot dplyr survival]; }; + Infusion = derive2 { name="Infusion"; version="1.0.0"; sha256="1n0wp05xzr1sbd1a5p36d7f9lg7bhp1yha71zg6h5zjdzpsjjh1a"; depends=[blackbox geometry Matrix mvtnorm numDeriv proxy rcdd Rmixmod spaMM viridis]; }; + InspectChangepoint = derive2 { name="InspectChangepoint"; version="1.0.1"; sha256="1wirdbz4v7hk7znpjhw9j3l596lmfcrlr4wxayw7klbbdhcwq5qs"; depends=[MASS]; }; + IntClust = derive2 { name="IntClust"; version="0.0.2"; sha256="1n0ywickky1w5m8swfidiprdnkrv0mrh9z5294bimxj5ppi1yl8v"; depends=[a4Core ade4 analogue Biobase cluster e1071 FactoMineR ggplot2 gplots gridExtra gtools limma lsa plotrix pls plyr prodlim SNFtool]; }; IntLik = derive2 { name="IntLik"; version="1.0"; sha256="13ww5bsbf1vnpaip0w53rw99a8hxzziibj7j66cm31jmi8l6fznf"; depends=[maxLik]; }; + IntNMF = derive2 { name="IntNMF"; version="1.1"; sha256="0bw6ycf7zrbfh8dfpgva1a51nazkvwlq7pxdhpp1j1mhabwm2nq2"; depends=[cluster InterSIM MASS mclust NMF]; }; + IntegrateBs = derive2 { name="IntegrateBs"; version="0.1.0"; sha256="1pkx4wpahd1sabzx55law3710x3vbh9yi6kii8gs2xfq3cb1llmq"; depends=[]; }; IntegratedJM = derive2 { name="IntegratedJM"; version="1.4"; sha256="1r42zzrm5cmqlaxxzla0fwf5l34qjil9ndmv2cdwzw1kbqp84qz4"; depends=[Biobase ggplot2 nlme]; }; - InterSIM = derive2 { name="InterSIM"; version="2.0"; sha256="0vzhrm02m44ckxla0q868nwskkldd5p008xfi3mgp5mh5iqgqpxv"; depends=[MASS NMF]; }; - InterVA4 = derive2 { name="InterVA4"; version="1.7.1"; sha256="0qdfbvh6ab5w3ym1mydfq0cjimj8ydnh01aw69grhc4is43vr667"; depends=[]; }; + IntegratedMRF = derive2 { name="IntegratedMRF"; version="1.1.5"; sha256="0f2jsf6lh1nrrfqdgq72jqan94f81cr2pckfcjn86c933gjlq4bm"; depends=[bootstrap caTools ggplot2 limSolve Rcpp]; }; + InterSIM = derive2 { name="InterSIM"; version="2.1"; sha256="092fw918qq8pahyxxznabkdfrb8700bpkkq96zj8ihpkx2ngkxln"; depends=[MASS NMF]; }; + InterVA4 = derive2 { name="InterVA4"; version="1.7.3"; sha256="1ql9mdl9q7n7kj4c6wfgjfi87bp7n30knbxg9way7ifgr2yqn8bb"; depends=[]; }; Interact = derive2 { name="Interact"; version="1.1"; sha256="1g9zhafdpr7j410bi8p03d8x9f8m3n329x8v01yk15f65fp7pl1d"; depends=[]; }; InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.1"; sha256="1ljxgiia0y8wv1rlm5brd0yvs1r7r5wyrs6nykmwrwwya4k34mpz"; depends=[MASS tkrplot]; }; Interpol = derive2 { name="Interpol"; version="1.3.1"; sha256="1598lnnrcxihxysdljphqxig15fd8z7linw9byjmqypwcpk6r5jn"; depends=[]; }; Interpol_T = derive2 { name="Interpol.T"; version="2.1.1"; sha256="1fbsl1ypkc65y6c0p32gpi2a2aal8jg02mclz7ri57hf4c1k09gz"; depends=[chron date]; }; - InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.4-1"; sha256="0gv1a78cxha6nvx1x234xpyc80wzl27650j79cs26m2pmg86z7kn"; depends=[glmnet mboost]; }; + InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="0.83"; sha256="1iwhgfb7z9pbnwzn626v0w0ycfjlhpaiv1yzm062samvr0lqiyrh"; depends=[enviPat plyr Rdisop]; }; + InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.6-1"; sha256="16qlskxszpi24qsdl821n72pzdvmf1gg7lnlwyhyzhzzkh9az1pd"; depends=[glmnet mboost]; }; InventorymodelPackage = derive2 { name="InventorymodelPackage"; version="1.0.2"; sha256="1w35idsagl9v93ci3qmal3xbf11sy6h1k7xnv25c59ivfnpjpkva"; depends=[e1071]; }; - IsingFit = derive2 { name="IsingFit"; version="0.3.0"; sha256="0imgj3g6sankzmycjkzzz3bgai3jjycgsinhs5zy9k4vgqjg27d6"; depends=[glmnet Matrix qgraph]; }; + IrishDirectorates = derive2 { name="IrishDirectorates"; version="0.1.0"; sha256="0741093vq1cqs9zh95fc6kwpd4a4r4yxvmcnp7f7j5xxyqy1h3xz"; depends=[]; }; + IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; }; IsingSampler = derive2 { name="IsingSampler"; version="0.2"; sha256="16vwb5pcqjvvsk9wsgj10mzhgh72iz1q6n8nmkva6y1l7xv54c8w"; depends=[magrittr nnet plyr Rcpp]; }; Iso = derive2 { name="Iso"; version="0.0-17"; sha256="0lljc99sdzdqj6d56qbsggibr6pkdwkh821bj70ianikyvmdc1y0"; depends=[]; }; IsoCI = derive2 { name="IsoCI"; version="1.1"; sha256="0r7ksfic6p2v95c953s4gbzzclk4ldxysm8szb8xba1w0nx2izil"; depends=[KernSmooth]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; - IsotopeR = derive2 { name="IsotopeR"; version="0.5.2"; sha256="1ny9drxhp547d9dhdlq78q3nqmril77x1ka6q809j9sklmpvx42q"; depends=[colorspace ellipse fgui plotrix runjags]; }; - JADE = derive2 { name="JADE"; version="1.9-93"; sha256="0ryj7yiwgrz3cq8q5x6m2srlxxbm26gzs191gs4z9sbjk91vgcnp"; depends=[clue]; }; - JAGUAR = derive2 { name="JAGUAR"; version="3.0.0"; sha256="0y4h2d4aw546ldwxs7rhpyb7hsby75h53b9vbkqz49105b8zai3j"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; + IsoSpecR = derive2 { name="IsoSpecR"; version="1.0.3"; sha256="1cnkzc29k0inz6kdn77l0ymzjgf1hid8jza7nla4ym2s0gidgdyf"; depends=[Rcpp]; }; + IsoplotR = derive2 { name="IsoplotR"; version="0.10"; sha256="1hlhj36bmxlj8y83kmis0knwgfn0s8dab1nw0715d2vhh74g4xmp"; depends=[MASS]; }; + IsoriX = derive2 { name="IsoriX"; version="0.4-1"; sha256="0j6lb7kvxw1lywq0jg8d26936521pyw5apz9k9cf34pb3hsa5qm2"; depends=[latticeExtra numDeriv proxy RandomFields raster rasterVis sp spaMM]; }; + IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; + JADE = derive2 { name="JADE"; version="2.0-0"; sha256="15bcq6r2iargxkb0pdbqkwrrn2rs7hc3y5fxjm5mb377513sdz5j"; depends=[clue]; }; + JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; }; JBTools = derive2 { name="JBTools"; version="0.7.2.9"; sha256="0bynqn3daqgmi3l9asy34mfwyfjkn35k465dfqqi3xwx6cbzlg5k"; depends=[colorspace foreach gplots plotrix]; }; JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; JGL = derive2 { name="JGL"; version="2.3"; sha256="1351iq547ln06nklrgx192dqlfnn03hkwj3hrliqzfbmsls098qc"; depends=[igraph]; }; JGR = derive2 { name="JGR"; version="1.7-16"; sha256="0iv659mjsv7apzpzvmq23w514h6yq50hi70ym7jrv948qrzh64pg"; depends=[iplots JavaGD rJava]; }; - JM = derive2 { name="JM"; version="1.4-2"; sha256="1rsfj7xm5g524xf6v2frkbn3l3bfxn0lrv0qjc81145qn626ybw2"; depends=[MASS nlme survival]; }; - JMbayes = derive2 { name="JMbayes"; version="0.7-8"; sha256="0pmwlip6bc4757amdsx3j6lz0mkxgi42qvlkncwks2nyqq9nfhn2"; depends=[MASS nlme survival]; }; + JM = derive2 { name="JM"; version="1.4-5"; sha256="1v3aiz5882kwg8iagmb309i212ndksi6l8bgdnq6j77lixc3a87b"; depends=[MASS nlme survival]; }; + JMbayes = derive2 { name="JMbayes"; version="0.8-0"; sha256="1kay6na8mb7k2r4alpzm2lb8phjqr3a05qfpv4ydd16rbjrlfbph"; depends=[MASS nlme survival]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; JOP = derive2 { name="JOP"; version="3.6"; sha256="1kpb1dy2vm4jgzd3h0qgdw53nfp2qi74hgq5l5inxx4aayncclk7"; depends=[dglm Rsolnp]; }; + JOUSBoost = derive2 { name="JOUSBoost"; version="1.0.0"; sha256="1m4h0jsmnk1sr8h94s7kndmsl6l8rlq65fh17slbadppfgyb1nfd"; depends=[Rcpp rpart]; }; JPEN = derive2 { name="JPEN"; version="1.0"; sha256="12rvp5bmlkwyr1gg336k655hp09gym0d2wwry70c1rz30x1sf2zs"; depends=[mvtnorm]; }; JPSurv = derive2 { name="JPSurv"; version="1.0.1"; sha256="11hfji0nyfmw1d7y2cijpp7ivlv5s9k8g771kmgwy14wflkyf7g2"; depends=[]; }; - JRF = derive2 { name="JRF"; version="0.1-3"; sha256="1ljgmvsq8mjl01kl82g5qzp857wjm2zlg9qz4zgjqbawbs4p4s72"; depends=[]; }; + JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; + JSM = derive2 { name="JSM"; version="0.1.0"; sha256="075zkh732cfrnjmd90pa84yxm8vg230b5r1m1j2b27xxrgng1lgv"; depends=[nlme Rcpp RcppEigen statmod survival]; }; + JWileymisc = derive2 { name="JWileymisc"; version="0.2.1"; sha256="0cli204f1b5hj3qz62fycww12a6dv7xxxszkxgrxirw6mpdf858c"; depends=[cowplot data_table devtools foreach ggplot2 Hmisc lavaan MASS mgcv mice multcompView plyr]; }; JacobiEigen = derive2 { name="JacobiEigen"; version="0.2-2"; sha256="1q6wqxlhslip14544px1aq446m77a8s0chvhpc19im014w4g930v"; depends=[Rcpp]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-1"; sha256="13n6xzbbjgd0bpwv2xgm3dlscg87wh32q6fcq50kk6byp6yv05sc"; depends=[]; }; + Jdmbs = derive2 { name="Jdmbs"; version="1.0"; sha256="1mhr1z6427lcm018pmllmhhsbnxa7cbmp9a5bjxb5n2zy1j71623"; depends=[igraph rmarkdown]; }; Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.2.3"; sha256="0b1jwplds5b7z15v6bvqj1rbn7zxpgvh2ykhqplxzv4mlaw6i0li"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; JohnsonDistribution = derive2 { name="JohnsonDistribution"; version="0.24"; sha256="00211pa2wn4bsfj6wfl9q9g123cp8iz3kxc17pw9q65j9an4sr0m"; depends=[]; }; + JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointRegBC = derive2 { name="JointRegBC"; version="0.1.1"; sha256="0w7ygs3pvlqkkb2x20kv20kda3gz7cn6zgrkg30nhjxp318d76ab"; depends=[MASS nlme survival]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; KATforDCEMRI = derive2 { name="KATforDCEMRI"; version="0.740"; sha256="1k8fihd9m26k14rvc5d5x0d9xc3mh8d49hs64p55np1acqfhg2sy"; depends=[locfit matlab R_matlab]; }; KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; }; - KFAS = derive2 { name="KFAS"; version="1.2.2"; sha256="06bkmb6gsh4lxjvmb9p5d143f1xkr9r6nlh4jmf9l297xwv35b7w"; depends=[]; }; + KFAS = derive2 { name="KFAS"; version="1.2.5"; sha256="144yiwww0vn309dikhj8irppg021qjy3zi6m6yna14payplnqyxr"; depends=[]; }; KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; }; KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; }; KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; - KODAMA = derive2 { name="KODAMA"; version="0.0.1"; sha256="199l6y5b98ags5p7jf150v0i0kcdxlsr2q0rgdpz9ra1hw1cjsfb"; depends=[class e1071 plsgenomics]; }; - KOGMWU = derive2 { name="KOGMWU"; version="1.0"; sha256="0nk7vbppimrf01wnxsg2wjpagjrzs6gh3a6jlqy9bdfh0j4fm0kn"; depends=[pheatmap]; }; + KODAMA = derive2 { name="KODAMA"; version="1.4"; sha256="0qzpgj6ljzd8n8vgmf53pmblsmypl86j7njd3pz0d370bxfchsqj"; depends=[Rcpp RcppArmadillo]; }; + KOGMWU = derive2 { name="KOGMWU"; version="1.1"; sha256="0n07wrpmmvxflxpmhkp3gm40xz2w4j0l8dsljhmfiyxcf5y7kq2g"; depends=[pheatmap]; }; KRLS = derive2 { name="KRLS"; version="0.3-7"; sha256="0dx4b68xx3saqlkbpvvrhxjscl7jr5phwqvjywxsp4qxlr3ysl79"; depends=[]; }; + KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; }; KScorrect = derive2 { name="KScorrect"; version="1.2.0"; sha256="1rymzllm97z22xwsn5wbn02c0xp0kfdp73mk9jrk81hfdpd15p4i"; depends=[MASS mclust]; }; + KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.1"; sha256="1hsndxslqgca0ay4q277zjwnwz8bzwfkzz915dgqvjd2v4afrvzx"; depends=[]; }; KappaGUI = derive2 { name="KappaGUI"; version="1.2"; sha256="014d3lshq3avrncd8ydjpn59zalq46v29jrlz3g76wzr96xf5ckr"; depends=[irr]; }; KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; }; KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.1"; sha256="1hq4sykddh9sg24qrnccii89nqxmq7hnldhn8wl6y62aj0h1nrqm"; depends=[plotrix Rcpp rgl]; }; - Kernelheaping = derive2 { name="Kernelheaping"; version="1.5"; sha256="0wzvc537nq0b7dx7wy41gx3sq7ghvniwhz41ldi59gkqcah7ax8m"; depends=[evmix ks MASS sp sparr]; }; + KernelKnn = derive2 { name="KernelKnn"; version="1.0.5"; sha256="0qrrndmrpqszwdjn1np63g8inz5l98wzsjf7yx0bc8fp8i0lj4lg"; depends=[Rcpp RcppArmadillo]; }; + Kernelheaping = derive2 { name="Kernelheaping"; version="1.6"; sha256="1xsszbx6srrgzdddr11pfrmfi985amjwngsrbhg8mgn58pwz3yiy"; depends=[ks MASS plyr sp sparr]; }; Kmisc = derive2 { name="Kmisc"; version="0.5.0"; sha256="0pbj3gf0bxkzczl6k4vgnxdss2wmsffqvcf73zjwvzvr8ibi5d95"; depends=[data_table knitr lattice markdown Rcpp]; }; - KoNLP = derive2 { name="KoNLP"; version="0.76.9"; sha256="1q72irl4izb7f5bb99plpqnmpfdq4x4ymp4wm2bsyfjcxm649ya8"; depends=[hash rJava Sejong stringr tau]; }; - KoulMde = derive2 { name="KoulMde"; version="1.0"; sha256="0dz13j24kyvr8kxs5lyvbjxj8l4i8h4il16qjn7hdnmi39g4khr4"; depends=[]; }; - Kpart = derive2 { name="Kpart"; version="1.1"; sha256="1cyml48i1jvwy4xzymijwraqpnssnkrd81q3m7nyjd5m2czjvihv"; depends=[leaps]; }; + KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; + KnowBR = derive2 { name="KnowBR"; version="1.1"; sha256="10cnnr110wyzxlmh8w3gfp53dx9jww0bv95rly8rvp5bhrava8y5"; depends=[]; }; + KoNLP = derive2 { name="KoNLP"; version="0.80.1"; sha256="1chj8kv1l405dm0jcsxjjjxx395z05sfxbcc5vxnpbydx7lxa6zy"; depends=[devtools hash rJava RSQLite Sejong stringr tau]; }; + KoulMde = derive2 { name="KoulMde"; version="3.0.0"; sha256="01mczlrdrfwdp2cj10kdqay3qpg8xf2v7vym62pll9l8n595snrl"; depends=[Rcpp]; }; + Kpart = derive2 { name="Kpart"; version="1.2.0"; sha256="14c6ngc37xpxy5pd5jishaqz6aahky32p0x5bfsn5zirdahlphsa"; depends=[leaps]; }; + KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.1.1"; sha256="1r9gs7k12djg56bifrpxbkj1kbcqgdpyqnjw5829gsx8881j2z9d"; depends=[dplyr ggplot2 tibble]; }; KrigInv = derive2 { name="KrigInv"; version="1.3.1"; sha256="0fcfv2vl572l8qp1ilhjai6zrw15bf1z41qm7xlfspfbj611ga7k"; depends=[DiceKriging pbivnorm randtoolbox rgenoud]; }; - L1pack = derive2 { name="L1pack"; version="0.3"; sha256="0lhixnfb2ga830z91z51r970l5s5qpavbwcmk1pi80180n11kv4i"; depends=[]; }; - LANDD = derive2 { name="LANDD"; version="1.0.0"; sha256="1w3y3dwq2rwf6arfgb8s70vzc3n7wbkkjanyn8iabk97f3i12r0i"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest Rcpp]; }; - LARF = derive2 { name="LARF"; version="1.3"; sha256="0crg89d377wkga0bc42y8bfk6chg06afchhgnab6q4dirwv9360q"; depends=[]; }; + L1pack = derive2 { name="L1pack"; version="0.38"; sha256="1my9fbqry1h3s1dwy8ia6rzkdp8map3n01vfwp0ddx4bw1mz2ffv"; depends=[]; }; + LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; }; + LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; }; + LBSPR = derive2 { name="LBSPR"; version="0.1.0"; sha256="1wiv0y2cbvxxcm9ywklp874d2v5412xw1p2v2rx90zlaq55ln7gv"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp tidyr]; }; LCA = derive2 { name="LCA"; version="0.1"; sha256="14nhx2fs18558zljnw56mdz3qx30v394llhzswxhznjfiiqc9z5h"; depends=[]; }; LCAextend = derive2 { name="LCAextend"; version="1.2"; sha256="1y9azq9v42a3z5fq6gj8js89qblb2z93k4mg4jmw0wgkyv6mysfc"; depends=[boot kinship2 mvtnorm rms]; }; + LCF = derive2 { name="LCF"; version="1.6-6"; sha256="1pcm1fdf0s2ygd425h2yi3j4r41zwi2bq2xsc20ymzq8lxq7d4rb"; depends=[quadprog]; }; LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; LCMCR = derive2 { name="LCMCR"; version="0.4.1"; sha256="1pn11a0h4986wvllkpspymvh1qyi5vhpcz0qg7wa32jbla9is87s"; depends=[]; }; LDAvis = derive2 { name="LDAvis"; version="0.3.2"; sha256="1y9wd379rfv3rd3f65ll21nvh6i8yafvv11f8gw8nn06194dgfzg"; depends=[proxy RJSONIO]; }; @@ -1153,9 +1453,12 @@ in with self; { LDPD = derive2 { name="LDPD"; version="1.1.2"; sha256="1khdx8vwlpliyjc4sxcdiywbxl8lc9f5s3457vcip1j8dv537lbm"; depends=[MASS nleqslv]; }; LDRTools = derive2 { name="LDRTools"; version="0.2"; sha256="0k4j3l21n8b3nvhmfjhwhs3klw09a0dz6cl6gmi2yx7jr21ar6xc"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.1"; sha256="0i4npl90mkj8vry6ckq8bc4ydbl44vxichgsxyn80r6k9i71yl67"; depends=[MASS]; }; - LDheatmap = derive2 { name="LDheatmap"; version="0.99-1"; sha256="1bj42chw1xyf8yg6cfv9p4yzsggng7zy6wrw6q22559pwm6c6vr0"; depends=[genetics]; }; + LDheatmap = derive2 { name="LDheatmap"; version="0.99-2"; sha256="0n80l4wl9rs4ps8h2bjpar5nidq7bg05d6675wiwanx24q6fc0bs"; depends=[chopsticks genetics]; }; LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; + LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; + LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; LEAPFrOG = derive2 { name="LEAPFrOG"; version="1.0.7"; sha256="0z9ahkk4qzc45h1r806frv9cd84vvshvn5mr84gx7qdxljfkfq6h"; depends=[alabama MASS]; }; + LEGIT = derive2 { name="LEGIT"; version="1.0.0"; sha256="0j15z2krj7b1939vrvjhcr3aw5crjdrvn6llzzrkibrh71m4dscq"; depends=[formula_tools pROC]; }; LFDR_MLE = derive2 { name="LFDR.MLE"; version="1.0"; sha256="11vy6gg2x98s1y8a5ns9vcd61gw8ax1lhn4lvicdjbd1lg18nm83"; depends=[]; }; LGEWIS = derive2 { name="LGEWIS"; version="0.2"; sha256="0aqvj6vphg33jfyfkj0zkdbp60a94jlc1vcsba2nyywc54qm9wjh"; depends=[CompQuadForm geeM pls SKAT]; }; LGRF = derive2 { name="LGRF"; version="1.0"; sha256="1kdx6y55aa9n6v43zfz6jk8amvvxbx79sqm1jx4ihgkpgcdglan7"; depends=[CompQuadForm geepack SKAT]; }; @@ -1167,10 +1470,11 @@ in with self; { LIStest = derive2 { name="LIStest"; version="2.1"; sha256="1gk253v3f1jcr4z5ps8nrqf1n7isjhbynxsi9jq729w7h725806a"; depends=[]; }; LLSR = derive2 { name="LLSR"; version="0.0.2.0"; sha256="0nxp1sfnhgf0iqfhwqvr7a0mvs3swsj2l0shcyrb3zliyd23g5ax"; depends=[digest ggtern rootSolve svDialogs XLConnect]; }; LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="2.10"; sha256="08jz0i7sv7gn3bqckphbmnx0kc6yjnfvi06iyf7pcdzjaybxhj06"; depends=[fields LCFdata lme4 Matrix mgcv rgl]; }; - LMest = derive2 { name="LMest"; version="2.2"; sha256="0ivsqc89zi6dxhkjnqakvm4da3vpn03lbid9m2aklf9b5jk06247"; depends=[MASS MultiLCIRT]; }; + LMest = derive2 { name="LMest"; version="2.3"; sha256="0jgfdkzx8zhfjsmx828j1x1dmikqhdpgpqzr7nq8zyr4805l67xx"; depends=[MASS MultiLCIRT]; }; + LNIRT = derive2 { name="LNIRT"; version="0.1.0"; sha256="0szcdp9vl1mifb3ybwi836xif7b57vk2jqp0zcadkfardjpc7pd0"; depends=[MASS]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOGIT = derive2 { name="LOGIT"; version="1.3"; sha256="1nx9ycrys0p08xr1n7bqgn47k5wz1zbp6w5pwsqk5c6f6did2rs1"; depends=[caret e1071 ggplot2 MASS pROC reshape]; }; - LOST = derive2 { name="LOST"; version="1.1"; sha256="19ar85dykbz0jlzbhlm3pcpffj4cizc6sj3gn93qdvpxkp64jfq9"; depends=[e1071 gdata MASS miscTools pcaMethods shapes]; }; + LOST = derive2 { name="LOST"; version="1.2"; sha256="1ymdhd2iayqyf7kvvcc234bslxn1wdds54m1bi234g1f4ljj1qv8"; depends=[e1071 gdata MASS miscTools pcaMethods shapes]; }; LPCM = derive2 { name="LPCM"; version="0.45-0"; sha256="15gpb59556s28npdsw1r821rld7b11y1m2m97m320n9k0z4vbk3i"; depends=[]; }; LPM = derive2 { name="LPM"; version="2.6"; sha256="0fr84l4qxr1ckjafw0i8g6fn74g8qavcs218g3wa03ckab0y98ps"; depends=[fracdiff MASS QRM]; }; LPR = derive2 { name="LPR"; version="1.0"; sha256="16kmfm6p7cwnzpd054ik0cy0ipif6zssdfyxyfm0cijz8z4z40x7"; depends=[doParallel foreach glmnet iterators lattice Matrix slam]; }; @@ -1182,31 +1486,39 @@ in with self; { LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; LS2W = derive2 { name="LS2W"; version="1.3-3"; sha256="0pdsv7ld0j116rh94m5y1i2mwrzc80fqxmc6ykc51i1sj6ws3i5k"; depends=[wavethresh]; }; LS2Wstat = derive2 { name="LS2Wstat"; version="2.0-3"; sha256="0wkh1a6xbp3qg5favxsj166jcgdza16zki675gswxckana6s4is7"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; - LSAfun = derive2 { name="LSAfun"; version="0.5"; sha256="1f4bv7c7y0ydq2xddr1y4mhp8i9xnjbndvmqnpkvlj702dx63rdx"; depends=[lsa rgl]; }; + LSAfun = derive2 { name="LSAfun"; version="0.5.1"; sha256="0wj2j53jizg014sppag9zbs5hzc3mvpg1fx1s7l4ff6rabhgvlff"; depends=[lsa rgl]; }; + LSAmitR = derive2 { name="LSAmitR"; version="1.0-0"; sha256="18rpvbiq3vqdcxzbx15x16y4hwdk050fk0wpccwcdgzlf79fjv6f"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; LSD = derive2 { name="LSD"; version="3.0"; sha256="069p33aw6iwikp82b7b8wa77wlyjqwr4hcwvrgaxgwqdgn6jjg3k"; depends=[]; }; - LSDinterface = derive2 { name="LSDinterface"; version="0.2.1"; sha256="1n8ynb99avn6nlhfnl1k8yn5qywhgin67fzk7b7c4b2dd3bhjd3w"; depends=[abind]; }; + LSDinterface = derive2 { name="LSDinterface"; version="0.3.0"; sha256="146qahfqqk9nvi52dv0z3v8yy4zhs9y295hzaaczxa2kqii2wprb"; depends=[abind]; }; LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; }; + LSPFP = derive2 { name="LSPFP"; version="1.0.0"; sha256="074qd7zxa54cawipmba1khb6hyrkg553vc25gf2z0ydyv14shm0w"; depends=[bit64 data_table R_utils RCurl seqinr tcltk2]; }; LSTS = derive2 { name="LSTS"; version="1.0"; sha256="1vgdqyj6k50gqfffqfb4n3sw27jrq21nl2h8sz8942w4a8fn7sgv"; depends=[]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; + LTRCtrees = derive2 { name="LTRCtrees"; version="0.1.5"; sha256="08g6bb2fbjw7xssav1n2hgr3x7wdpczvbdz2kgrgv8bhl1f4k9yx"; depends=[partykit rpart survival]; }; LVMMCOR = derive2 { name="LVMMCOR"; version="0.01.1"; sha256="1lq4hqcg0qkywdr4a22m1fr3m97749mm6n2jzdj9i7jrf0agc1fs"; depends=[MASS nlme]; }; LW1949 = derive2 { name="LW1949"; version="1.0.0"; sha256="0icfgsh93f4i73p7wpacb6dsg4cdfh71l7rwhqknnifvb5nvp8sv"; depends=[MASS mgcv plotrix]; }; - LaF = derive2 { name="LaF"; version="0.6.2"; sha256="180xsqilpkql8my0dimsxj1kpmb3jl19l6bz8li8m63zii4xmwmp"; depends=[Rcpp]; }; - Lahman = derive2 { name="Lahman"; version="4.0-1"; sha256="058rn595rnh2wl7qqrqd5smzzb486cn46lx2ifjc8nijm83lzhfx"; depends=[]; }; - LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.4.1"; sha256="0bki7q1r3q80kg5kdxpig4lpzcy978zy9jx9mv40643idskrx2z3"; depends=[plyr rLakeAnalyzer]; }; + LaF = derive2 { name="LaF"; version="0.6.3"; sha256="0mp1g8pikmkahxgshgs4a7iryxzzcxhxdzvdn60s6m9h1addvhww"; depends=[Rcpp]; }; + LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="2.0"; sha256="0xqqq8glrq5c089riybviq3zv3la1pqhi2fcalrz3i9n2fc13nd1"; depends=[data_table maptools rgdal rgeos sp spdep]; }; + Lahman = derive2 { name="Lahman"; version="5.0-0"; sha256="03zfgsgf36lnsjlrqfh1npqnz52dhd6xyzs7k1sxygwy62lg03lx"; depends=[dplyr]; }; + LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.5.0"; sha256="06mvdrdyl0rh9rwd0jxww0sycadcp7cj08hq35q6vyzq0jkxn2xf"; depends=[plyr rLakeAnalyzer]; }; Lambda4 = derive2 { name="Lambda4"; version="3.0"; sha256="04ikkflfr0nmy1gr3gfldlh2v8mpl82k1wwnzp57d2kn75m9vbxz"; depends=[]; }; - LambertW = derive2 { name="LambertW"; version="0.6.2"; sha256="0sl47s82mkkn2yhdppnh37fb6kb38ilzp6gn16jvl24jzcr7mjkn"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; - Langevin = derive2 { name="Langevin"; version="1.1.1"; sha256="0zkd3ifv8w1szxf22740qn7cv7b0bahq988lbr14smkrm3qyq37v"; depends=[Rcpp RcppArmadillo]; }; + LambertW = derive2 { name="LambertW"; version="0.6.4"; sha256="09ygalklv0d767nwziqwaxa7h517rzqgaznmb04q43122x2gwb3k"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; + Langevin = derive2 { name="Langevin"; version="1.2"; sha256="0iy1nh4wzipw8spmfr0kscdnpaz3cq4idkbl5khiia2jid0kimvl"; depends=[Rcpp RcppArmadillo]; }; LaplaceDeconv = derive2 { name="LaplaceDeconv"; version="1.0.4"; sha256="0n56cmrb536j1vmfizzag1x8wm68c2znpclwbdl8qraqzp8rmffx"; depends=[orthopolynom polynom]; }; + LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.0.1"; sha256="0yc6bv1mvs8ivrjgi49xz5bn4if24693rw148w5zxd11r3ryy8dy"; depends=[]; }; + LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.1"; sha256="1vd47vf88qsac02sdnwag1zgvclnjw10apdbfkapxkik3xs0wkck"; depends=[Matrix Rcpp]; }; + LatentREGpp = derive2 { name="LatentREGpp"; version="0.2.2"; sha256="0y00rf53bwmx3f6k637n3jh8597k96xm679li079ij5l7j9r2yb3"; depends=[ade4 BH FactoMineR fastGHQuad MASS mvtnorm numDeriv optimx paran randtoolbox Rcpp RSpectra sirt statmod]; }; Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; }; - LatticeKrig = derive2 { name="LatticeKrig"; version="5.4-1"; sha256="1lbnrjsfc9yirg18qx8jc20f9xhymf125p3g4bqp3kqa1mcjzvxs"; depends=[fields spam]; }; + LatticeKrig = derive2 { name="LatticeKrig"; version="6.2"; sha256="1d3qphpydgrqkyk5y5pr6jjndaf9vnfcin447x4z0iczannhggbk"; depends=[fields spam]; }; LeLogicielR = derive2 { name="LeLogicielR"; version="1.2"; sha256="0h52pzrksi1mn55mnxbfi61hl7x61cnkhp450slfrk68f6kp30x6"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; LeafAngle = derive2 { name="LeafAngle"; version="1.2-1"; sha256="0g3i5300f3rvjz7g7z8s5n8xdcsp41gf1vnr4g36m1likddfpxlx"; depends=[]; }; - LeafArea = derive2 { name="LeafArea"; version="0.1.1"; sha256="0k085idzs2ka8pqlmii5xcmbv7wm3syicy36gc183wycibv3ii9f"; depends=[]; }; + LeafArea = derive2 { name="LeafArea"; version="0.1.5"; sha256="1a3yygpnc160qkwp3fd6aksynd533z5slncvby06byngqb42ib4h"; depends=[]; }; LearnBayes = derive2 { name="LearnBayes"; version="2.15"; sha256="0cz2rgqy1cmdz2h1qbdvfqxmmdzmg2z1scdlxr7k385anha13ja5"; depends=[]; }; - LexisPlotR = derive2 { name="LexisPlotR"; version="0.2"; sha256="0l1cd32kl0690n07f27dmjp5975zgv57zi3km5g3xjiq3lnk8hqr"; depends=[ggplot2]; }; - LiblineaR = derive2 { name="LiblineaR"; version="1.94-2"; sha256="11q3xydd4navpfcy9yx0fld8ixb6nvnkc7qxwrhvackiy810q86i"; depends=[]; }; + LendingClub = derive2 { name="LendingClub"; version="1.0.2"; sha256="1k7jvlmjyp5n45lz20as6v93lvgap766qlxp1chvv83ranh6dw3d"; depends=[dplyr httr jsonlite]; }; + LexisPlotR = derive2 { name="LexisPlotR"; version="0.3"; sha256="1qdgs6p11j0ign27bbnn32g65sw42982ijrig5cwqsdvxpdabjl8"; depends=[ggplot2]; }; + LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; Libra = derive2 { name="Libra"; version="1.5"; sha256="1kd3d06qjswqhwdsjkijixd4yijzks8xcdrkpyh99dwg045fg9h7"; depends=[nnls]; }; LifeHist = derive2 { name="LifeHist"; version="1.0-1"; sha256="0q6l6rva5kxl8yzqa7ni4sdj6p4c61sdsjx8zhckzxb7xlwg2hh0"; depends=[BB Hmisc optimx]; }; @@ -1215,34 +1527,43 @@ in with self; { LinCal = derive2 { name="LinCal"; version="1.0"; sha256="1xr9jnna20hh78dh9wjg70jm8fhaxvdwql894kdp0y5h4pchkdph"; depends=[]; }; LinRegInteractive = derive2 { name="LinRegInteractive"; version="0.3-1"; sha256="0w7s3i6i2wnydh88l8lnzrh6w5zqkcwvms91iizis0mwd9af2jdl"; depends=[rpanel xtable]; }; LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.6"; sha256="10a1m4yqr02gg5akxknwmhrlbqxnza78z8rm0ym36c4vlz8b0hyi"; depends=[stringr]; }; + LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; }; LinearizedSVR = derive2 { name="LinearizedSVR"; version="1.3"; sha256="0h3xmlnd5x37r5hdhcz90z5n1hsbr2ci3m939i89p1x9644i2l5g"; depends=[expectreg kernlab LiblineaR]; }; - LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.1.0"; sha256="0dp4w8dk14vdrh3kgb6wqbc1j7nc86giajhfb1iv10mc72wplxm6"; depends=[]; }; + LinkageMapView = derive2 { name="LinkageMapView"; version="1.0.0"; sha256="0139bnlfj66w1npiv6dh4y4aln65nsfwf2qfzkxypigcyvxxyjwd"; depends=[plotrix]; }; + LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.2.0"; sha256="14q8n0zqm21fwfyfqvxdacxj6mdipgi2143d8xksifk5ihhdj64v"; depends=[]; }; Lmoments = derive2 { name="Lmoments"; version="1.2-3"; sha256="13p0r4w16jvjnyjmkhkp3dwdfr1gap2l0k4k5jy41m8nc5fvcx79"; depends=[]; }; + LncFinder = derive2 { name="LncFinder"; version="1.0.0"; sha256="1ygbmazjm2jk0wrd13khpx8rkwd51cb50qxs2zdad0w09705mpsx"; depends=[caret e1071 seqinr]; }; LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; }; + LncPath = derive2 { name="LncPath"; version="1.0"; sha256="1cihwlj5sv000qg2wa931yx4ca6nixgihjna4g3fh7nr5aiv6cfn"; depends=[igraph samr]; }; + LncPriCNet = derive2 { name="LncPriCNet"; version="1.0"; sha256="19cw3x97xv42kc4jag7axnmpd0nfnwg7vnwcn2bgcmm5gapmfn1h"; depends=[]; }; LocFDRPois = derive2 { name="LocFDRPois"; version="1.0.0"; sha256="0zzdp9wgwr6wn3grimghpj4vq34x37c8bqg8acfzlzih8frqal3r"; depends=[dplyr ggplot2]; }; Lock5Data = derive2 { name="Lock5Data"; version="2.6"; sha256="0ckaac00ck5vyv0gv25l1zhgkm3char6ks1p4fl3vdl5gdyrc1pp"; depends=[]; }; Lock5withR = derive2 { name="Lock5withR"; version="1.2.2"; sha256="10x3i11pb4cig4pgfmw9984na5zjbg7d41y6crakiimf53ihx0c2"; depends=[]; }; LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.5-9"; sha256="135vkp70q6gn75ds43aq08y13vrsgsgykssmnhrh6545i86vmhhi"; depends=[MASS mvtnorm]; }; LogicForest = derive2 { name="LogicForest"; version="2.1.0"; sha256="0zdyyi6wka0568414f1kw91rx04y76n1k11wxd4r8svb5wybjhp5"; depends=[CircStats gtools LogicReg plotrix]; }; - LogicReg = derive2 { name="LogicReg"; version="1.5.8"; sha256="0hjh4wk7dh1ryc75kipdgmkvhz15h46gr9qc5pk49286h11fbnsi"; depends=[survival]; }; + LogicOpt = derive2 { name="LogicOpt"; version="1.0.0"; sha256="15wcc2655vn1yz9gwxmqm9n1lmybk2gf4nlwz4i02kk4gabdazz0"; depends=[]; }; + LogicReg = derive2 { name="LogicReg"; version="1.5.9"; sha256="0rxzhbf51psdj7wb2dcah16y8f5q7y8p0yybz54rm00d1qagl6nq"; depends=[survival]; }; LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; }; LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; }; LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-4"; sha256="02p46agsdbvw6dpgzahq9hfmy184jrkwa1hhnrcbrsmm54n3m2bx"; depends=[nlme]; }; LotkasLaw = derive2 { name="LotkasLaw"; version="0.0.1.0"; sha256="11kq52yavicimp7ll7ljrs69a5fxf68ydb9md7v6b02iw5mwbmz7"; depends=[]; }; LowRankQP = derive2 { name="LowRankQP"; version="1.0.2"; sha256="0is7v4cy4w1g3wn4wa32iqv4awd1nwvfcb71b3yk5wj59lpm8gs3"; depends=[]; }; - Luminescence = derive2 { name="Luminescence"; version="0.5.1"; sha256="0jxx2ldcm814qbdqzgqc7gbf4ymaqyvzykbxzp2cfqhvg20rkh7s"; depends=[bbmle data_table digest httr matrixStats minpack_lm raster Rcpp RcppArmadillo readxl shape XML zoo]; }; + LumReader = derive2 { name="LumReader"; version="0.1.0"; sha256="1h2r3c9xkwlnaicn65085bdx7y86ha2fpd5mxirqax5lm6d8lirc"; depends=[gridExtra lattice plotly shiny]; }; + Luminescence = derive2 { name="Luminescence"; version="0.7.3"; sha256="1g2dqar35rrnky9p8h14p63prq9x7fl629y2xkaf70gfkk1j4pg4"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; M4comp = derive2 { name="M4comp"; version="0.0.1"; sha256="1lxm6qcbdp7i00vxbikhyl7pdxnz4czar10kh9xm0qwy8sl8lxg2"; depends=[]; }; - MAINT_Data = derive2 { name="MAINT.Data"; version="0.5.1"; sha256="12vxy2l7mjp4dalg59zp0rd8cy3548vdqpzdkiq2rhvf9fvymxzr"; depends=[MASS miscTools]; }; - MALDIquant = derive2 { name="MALDIquant"; version="1.14"; sha256="1f6g1ra2hvihdxqgydbh06azddx5m4rcvx2dzq9rh2fjnk1a0kpa"; depends=[]; }; + MADPop = derive2 { name="MADPop"; version="1.1"; sha256="1w2jbiki6d14y32p8a50b8g53m1iva2kgik14yg27z5hx1rwwq97"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; + MAINT_Data = derive2 { name="MAINT.Data"; version="1.0.1"; sha256="0qddlp4yfqfmswgjnfqlj9zqn6jdy94rzw92g0rl83iia9diqsmp"; depends=[MASS miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; + MALDIquant = derive2 { name="MALDIquant"; version="1.16.1"; sha256="0058i0nc81qp7sj7j9bcy7s2vkmbacj5ycwdnvsfmsr172adxdar"; depends=[]; }; MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.10"; sha256="1h1lvmw3233wgy1wvpa6n5q5j6z27hg3k31rq4a7c53w8g1bsmi3"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; MAMA = derive2 { name="MAMA"; version="2.2.1"; sha256="1dcyfir6jv28jzvphiqrjns3jh2zg2201iwcvjzbmddl2isk9h0i"; depends=[genefilter GeneMeta gtools MergeMaid metaArray metaMA multtest xtable]; }; - MAMS = derive2 { name="MAMS"; version="0.7"; sha256="0ggww2260qgf51329a9vp0386i5mn3772aw56qwxyhbxyh7bkayw"; depends=[mvtnorm]; }; - MAMSE = derive2 { name="MAMSE"; version="0.1-3"; sha256="06q6raqbyi9zwg3wzaygqmfs3di55fh4bln3vscdw95kma4hz9km"; depends=[]; }; + MAMS = derive2 { name="MAMS"; version="1.0"; sha256="1y322is7c60naaz4cb090wpavw71y7hvx6n3k41ig8rfh096f60b"; depends=[mvtnorm]; }; + MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; }; MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; }; - MAPA = derive2 { name="MAPA"; version="1.9"; sha256="1i143x2l6fq4vl8l8cagai580yqv446pdw4gw5qzxp85hgvm8bvg"; depends=[forecast]; }; + MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.0.4"; sha256="1xw0wk2a14xwgay3vw7s1sxpwrmm01lqnfphcnhf1iyhdsxqnnnc"; depends=[magic MASS Matrix plotrix plyr]; }; + MAPA = derive2 { name="MAPA"; version="2.0.1"; sha256="013gp1wnw77nf1d9mvvw9zxs3dml9jvxd50nifx76bpkr00im940"; depends=[forecast RColorBrewer smooth]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; MAR1 = derive2 { name="MAR1"; version="1.0"; sha256="1r6j890icl5h3m2876sakmwr3c65513xnsj68sy0y0q7xj3a039l"; depends=[bestglm leaps]; }; MARSS = derive2 { name="MARSS"; version="3.9"; sha256="0vn8axzz0nqdcl3w00waghz68z8pvfm764w11kxxigvjpw2plj31"; depends=[KFAS mvtnorm nlme]; }; @@ -1251,80 +1572,96 @@ in with self; { MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; }; MATA = derive2 { name="MATA"; version="0.3"; sha256="006mnc4wqh9vdigfzrzx4csgczi0idvlwb6r23w5mmsfbn0ysdm5"; depends=[]; }; MATTOOLS = derive2 { name="MATTOOLS"; version="1.1"; sha256="1nzrkm3a08rpsd9vplyf33rrkadlrd0ln70k95qxj98ndh2v97px"; depends=[]; }; - MAVIS = derive2 { name="MAVIS"; version="1.1.1"; sha256="1ydmnf4nn1d0iik3ldkk8d4291fvzhrgsjm0qkzd242r0mm2ss2p"; depends=[compute_es ggplot2 MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS]; }; + MAVE = derive2 { name="MAVE"; version="0.1.7"; sha256="10blz9axxnnjcdg796gr2y27f4mjb1b5daw23llzrclgg2fsykgf"; depends=[Rcpp RcppArmadillo]; }; + MAVIS = derive2 { name="MAVIS"; version="1.1.2"; sha256="1ankgazqf368jhj8csmyyvlys27d61s41fcxq3s324gz69xh25ll"; depends=[compute_es ggplot2 MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS weightr]; }; MAVTgsa = derive2 { name="MAVTgsa"; version="1.3"; sha256="0rzal9nsi8y873cbf6hrdyzyxnpd4r1yr9fj66cn0s1c8g93ls0y"; depends=[corpcor foreach MASS multcomp randomForest]; }; MAc = derive2 { name="MAc"; version="1.1"; sha256="1lshi5rb8l2mpd302wskhlk5vz1wjidvbss9y69l63zjqdwjs7ch"; depends=[]; }; MAclinical = derive2 { name="MAclinical"; version="1.0-5"; sha256="1g0ka1kqww2xim8rp5rznkzn0a541zvf841s3lbphfh9k3y3ixs3"; depends=[e1071 party plsgenomics st]; }; MAd = derive2 { name="MAd"; version="0.8-2"; sha256="0mhys27rmzb0kal4jr8j2y44z4qq46fw260sxl8da9qqvplcwq1p"; depends=[]; }; MBA = derive2 { name="MBA"; version="0.0-8"; sha256="09rs1861fz41dgicgh4f95v4zafh1jfxhqar1plpqqdx8z1gpxfl"; depends=[BH sp]; }; + MBC = derive2 { name="MBC"; version="0.10-1"; sha256="14y0adpm0h57b6r15hi69ri69kmfvxnacvxsspfhijyxhnwgnan6"; depends=[energy Matrix]; }; MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; }; - MBESS = derive2 { name="MBESS"; version="4.0.0"; sha256="09sz3g78h584034v9xx8n03swnc01mabiavhryr0hcgsh2hdhz9i"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; + MBESS = derive2 { name="MBESS"; version="4.2.0"; sha256="02d7wpsh58jq79ph9xxx33ikzb4j05kdfmjy935gyx3i3mycapm1"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; + MBHdesign = derive2 { name="MBHdesign"; version="1.0.61"; sha256="1ahc3xwwgfn052m674l2cxjw87qgp788hzx30z56dihfpirvw45f"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; + MBSGS = derive2 { name="MBSGS"; version="1.0.0"; sha256="1g13bjxmbnd7fwb3nv1s87ra7iwjkvid9pfwy7qxixy80pdrlfz5"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBTAr = derive2 { name="MBTAr"; version="1.0.1"; sha256="0zak19pdk0wwkhl4kj1jbwx0qmqcgpmmqv3vk0wg8nwgf1l65idy"; depends=[jsonlite]; }; MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; - MCAPS = derive2 { name="MCAPS"; version="0.3-2"; sha256="1jvxl9xi102pcs3swxlx4jk76i7i4fll88c92k7m379ik3r36alb"; depends=[stashR]; }; - MCDA = derive2 { name="MCDA"; version="0.0.12"; sha256="1lvnsv4x35wh8gzdjqql9rpzxx0x6jyrgm5bdlmak38l6gg3r87w"; depends=[glpkAPI Rglpk]; }; - MCDM = derive2 { name="MCDM"; version="1.0"; sha256="0lajn4kv6hjxkrac08wvviws8lv6nnr70ibclm5cnwmvvaxfvn4d"; depends=[]; }; - MCI = derive2 { name="MCI"; version="1.0.0"; sha256="1p2qr9jf3zir7pccsw0fqy0f2ics177n4097r2wcwch86by47naq"; depends=[]; }; + MCAvariants = derive2 { name="MCAvariants"; version="2.0"; sha256="0akff64v49d5r0wvspal0pz17jhz1ry4vdmj47m28gzjj69zcab0"; depends=[]; }; + MCDA = derive2 { name="MCDA"; version="0.0.16"; sha256="1yxcpvapn9dv802z3fm0sfgf8lkpsniwb41qnb8lbvmqnyzmkqhw"; depends=[glpkAPI RColorBrewer Rglpk]; }; + MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; }; + MCI = derive2 { name="MCI"; version="1.3.0"; sha256="0256rxsjcrwyah4ixhfl3ba46sh02sq3rc1h0mx2jckycdf0nx9r"; depends=[]; }; MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; }; MCMC_OTU = derive2 { name="MCMC.OTU"; version="1.0.10"; sha256="15k3y4bm4cxjb6r30afpw9gksflsxigzb17zwm1ipygq0d0h0zkg"; depends=[coda ggplot2 MCMCglmm]; }; - MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.2"; sha256="1ii5ryb58z4xwg69mximdjmxamkwz6k2ydf6qkd1jcq50afjv0pp"; depends=[coda ggplot2 MCMCglmm]; }; - MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.0"; sha256="1ib3rllvqjni9xg3634ankrr66f1lj376kl3xhfwnwbfsbi4a8pw"; depends=[evir]; }; - MCMCglmm = derive2 { name="MCMCglmm"; version="2.22.1"; sha256="045qxdqq58jf5rrx8jxp8db8s2i9hdi5abvkmcz0hjh146gpgimf"; depends=[ape coda corpcor cubature Matrix tensorA]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.3-5"; sha256="1jjj6v1nhdwaf6g9w0npdn07s02m58vi3va8b2knwzb1z68cjrqq"; depends=[coda graph lattice MASS mcmc quantreg Rgraphviz]; }; + MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; }; + MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; + MCMCglmm = derive2 { name="MCMCglmm"; version="2.24"; sha256="0s2x8kazn3g3x3z4ji95c5vmfj8awcjmx92c0alsj5ms1bqxsh7x"; depends=[ape coda corpcor cubature Matrix tensorA]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.3-9"; sha256="0wvv7qzrm1h5w4znz6dqypyxdj5ckpsljid1l9cs1xl9mnjfgpay"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.7.1"; sha256="1hqkxqs1s0m1znqlf6bjx5nscqv8galnkxgp738pcvvw0mwn19pk"; depends=[coda rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-20"; sha256="0j36dhi3bf3q14bbcmrmipz2fcn6g9gsqidzm43i8x5r7hcvv2lh"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; - MCPMod = derive2 { name="MCPMod"; version="1.0-8"; sha256="1kkak9x66dmannhxfdp6cybbjh2g43p03kyp7a4x1az7h4bnc92f"; depends=[lattice mvtnorm]; }; + MCPMod = derive2 { name="MCPMod"; version="1.0-9"; sha256="03zqassvyqwllg1yjfdg2zxamkg2dy8cy19ki5srpn6clv5zy1rj"; depends=[lattice mvtnorm]; }; MCPerm = derive2 { name="MCPerm"; version="1.1.4"; sha256="0g65vzn43k6qrsglxd2kz245f662gl3c2gdz6qvvxa96v6q9lhh1"; depends=[metafor]; }; MCS = derive2 { name="MCS"; version="0.1.1"; sha256="0fxc5ri4ci3r5w1hdicqm1j0g6fwrl3wng7qwc2c0isagrn3vp4n"; depends=[]; }; MCTM = derive2 { name="MCTM"; version="1.0"; sha256="14xjfskyrqi0m58lkwjfjpss5j7wy3ajr148n526czrrpccg108j"; depends=[]; }; MChtest = derive2 { name="MChtest"; version="1.0-2"; sha256="01lflilrp42m236cznn6qgzvv5v9fzpx6wcfxp3q545bw2xmbdvj"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; MDM = derive2 { name="MDM"; version="1.3"; sha256="1bvjhl243rf19829ly1qc20ik937hb82lq23aiysj7ya55z8hdpf"; depends=[nnet]; }; - MDMR = derive2 { name="MDMR"; version="0.3.0"; sha256="1135jvqbmh1811jw9ih0jvh7nv2d157yv7alwr8shlpx2vzlbbcw"; depends=[CompQuadForm]; }; + MDMR = derive2 { name="MDMR"; version="0.4.3"; sha256="0vgqdvvryyyzibpfwax8qx45phc9iwb5rwgqpcp21d32z0n7a56f"; depends=[CompQuadForm]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.2"; sha256="04w0y5ib23l7nhj1947hwvfk6lpwwc11amqpyw1w53yj794g97wz"; depends=[linprog Matrix]; }; MDR = derive2 { name="MDR"; version="1.2"; sha256="0g2fvvcwagml6635va87nc0ijzy0pypx5aqzz7mf5w13j0wpm24y"; depends=[lattice]; }; MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; }; - MDplot = derive2 { name="MDplot"; version="0.3"; sha256="1p46ggriwjrjrkbv9xkhpjiivz1gml0c2anpfrm83y2y9is19z37"; depends=[gplots gtools MASS RColorBrewer]; }; + MDplot = derive2 { name="MDplot"; version="0.3.1"; sha256="1d5gv47zaal6vsfi10vfjvawdm911pnhjradhkrd647w54iykl59"; depends=[gplots gtools MASS RColorBrewer]; }; MEET = derive2 { name="MEET"; version="5.1.1"; sha256="02xz2zkwqaf1wck9a3h1j6z8dasw4j0zqa88jg6h10wqzcrlp9ba"; depends=[Hmisc KernSmooth Matrix pcaMethods ROCR seqinr seqLogo]; }; + MEGENA = derive2 { name="MEGENA"; version="1.3.6"; sha256="0ylv7kbk0x3rm08aiwci4p3kma08qj4szlw2h1d6wcqmipy93v8s"; depends=[BH cluster doParallel foreach fpc ggplot2 ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-2"; sha256="0wyw8yjs4miwgwdfcnfbzvkxrgv5r3jlg3cg8q2vy7s69wvhksmy"; depends=[lme4]; }; - MESS = derive2 { name="MESS"; version="0.3-2"; sha256="0x518awi2mxjh3vq69n1jv4d4dxjxhqfx1py48dijgd6w674d3q8"; depends=[geepack glmnet kinship2 Matrix mvtnorm]; }; + MESS = derive2 { name="MESS"; version="0.4-3"; sha256="0317nk2lbrrflg6gaz7nz413n4i79xvh6jndw0m4dzlwmcj6al2r"; depends=[geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; + MEclustnet = derive2 { name="MEclustnet"; version="1.1"; sha256="1ayyrxdb9qd7fxnr8y2lbjcd2c8m38mjm1ks6z22vyddbhkf78in"; depends=[e1071 ellipse latentnet MASS mclust mvtnorm nnet vegan]; }; MExPosition = derive2 { name="MExPosition"; version="2.0.3"; sha256="1l27wp0psfvlkk79fhb8ypf8awardjljg1f37yj42friy9pdfksz"; depends=[ExPosition prettyGraphs]; }; MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; }; - MFAg = derive2 { name="MFAg"; version="1.3"; sha256="1f5kd5zvk28jd8km4py4msyv69700knj20db5c528f2j8sd8qavc"; depends=[]; }; + MFAg = derive2 { name="MFAg"; version="1.4"; sha256="092zbl2pxbsvfyf3qssbid14194p0ax2zrw0gzpyqwzdpx0brrlb"; depends=[]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; + MFPCA = derive2 { name="MFPCA"; version="1.0-1"; sha256="0sw8svp0zgdl2yyvf3jq3c3kai6pnnn93cizgyjdc63y74k3n3pz"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MGGM = derive2 { name="MGGM"; version="1.0"; sha256="0j9wyshwxd7zqb60avb7dmfgnrzv2nyn983bw0g5997zixz0w6mp"; depends=[]; }; + MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; MGLM = derive2 { name="MGLM"; version="0.0.7"; sha256="0wqwdx8gskrp2y04f947m0cvgd685n8g3wgggc8sv0ra7z2qzx9y"; depends=[]; }; MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; - MGSDA = derive2 { name="MGSDA"; version="1.2"; sha256="0a465kali82x9c0hld8f1m285d7zw0cf93lps87amlj3ck0nhh8z"; depends=[MASS]; }; - MHTrajectoryR = derive2 { name="MHTrajectoryR"; version="1.0"; sha256="1hp0v7w611b9a4k7zck3zx15b0298z1i2vrl2w35nw74iqpicrhh"; depends=[mgcv]; }; + MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; }; + MHTdiscrete = derive2 { name="MHTdiscrete"; version="0.1.3"; sha256="14qhrja5b2nxph3mda55y31jix41i6w884m9yl4c0f9g730ai7l6"; depends=[]; }; + MHTrajectoryR = derive2 { name="MHTrajectoryR"; version="1.0.1"; sha256="13idcjx7pjpwvr4c52938yqhhaj1gprb8hjhaim3jx4062wf9pla"; depends=[mgcv]; }; MHadaptive = derive2 { name="MHadaptive"; version="1.1-8"; sha256="1w3bm82v8ahxrf0vqn0pznv7dqn212drinkz8y5kr1flx423l9ws"; depends=[MASS]; }; - MIICD = derive2 { name="MIICD"; version="2.2"; sha256="16r3ry27iki32f2y4ic6w15fgr21wrs0qbiiyx23nqivvw8x4017"; depends=[MASS mstate survival]; }; - MIIVsem = derive2 { name="MIIVsem"; version="0.4.7"; sha256="1k0rfs5cm7n5xpk472mv74p3l2ic2y8vij6dfcv918jm5xsnz9sz"; depends=[lavaan Matrix]; }; + MIAmaxent = derive2 { name="MIAmaxent"; version="0.4.0"; sha256="0i2bw9s9zm2bfi121aafaqf86zvimf4gzix50wdh2q96bn61bb2s"; depends=[dplyr e1071 raster]; }; + MIDN = derive2 { name="MIDN"; version="1.0"; sha256="08i9zfmaywi5imp36ahjpirlkl55k01x543nz95i089w3sfrsz0g"; depends=[BiasedUrn]; }; + MIICD = derive2 { name="MIICD"; version="2.3"; sha256="08ygn2qqxzcnhs7rbd721i7h40l6n882xnmgi3li72vxyq64ndfa"; depends=[MASS mstate survival]; }; + MIIVsem = derive2 { name="MIIVsem"; version="0.4.8"; sha256="1l0n4zgjg8nzapjs65dlirlr13sgzmk2750rwjghxzdcinjbjsmb"; depends=[lavaan Matrix]; }; MILC = derive2 { name="MILC"; version="1.0"; sha256="14xsiw5al6kixwvf3ph0dlm8s13gsbqvzb92da6ng3x4iiyb1g0w"; depends=[]; }; MIPHENO = derive2 { name="MIPHENO"; version="1.2"; sha256="0hcaq66biv4izszdhqkgxgz91mgkjk1yrwq27fx07a2zmzj44sfv"; depends=[doBy gdata]; }; MIXFIM = derive2 { name="MIXFIM"; version="1.0"; sha256="0m4fnmdd8lsdxq629f87lzz1cdc1q0j3q9hqna85ncpflyfwlvg9"; depends=[ggplot2 mvtnorm rstan]; }; MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; MKLE = derive2 { name="MKLE"; version="0.05"; sha256="00hcihjn3xfkzy0lvb70hl2acjkwk6s3y7l4gprix24shnblvxzi"; depends=[]; }; - MKmisc = derive2 { name="MKmisc"; version="0.991"; sha256="0zswd681rzhzaf51ij8szah1r8dix870k3rqajqbr60nw4ahnfip"; depends=[RColorBrewer robustbase]; }; - MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="1.1"; sha256="1zp50y0628f69jn0bqi9lw9qrhh9rq275xl2nl6hakhc1z6mqkj0"; depends=[limSolve MASS MultiLCIRT]; }; + MKmisc = derive2 { name="MKmisc"; version="0.993"; sha256="0zhscicwcppwhpylax69ablkfllgf6f4fmp1gb7yi2cm59f94ny1"; depends=[RColorBrewer robustbase]; }; + MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="2.1"; sha256="07fhbhfnlmllxxdpdqiaz6d72y4pj3vrz6lw5rnlb2m7vknx51ik"; depends=[limSolve MASS MultiLCIRT]; }; MLCM = derive2 { name="MLCM"; version="0.4.1"; sha256="1g6lmw75qdiq0fshxr3sqwm1a3y4928chxkggnfwwxp8hqw4r6px"; depends=[]; }; MLDS = derive2 { name="MLDS"; version="0.4.5"; sha256="1a5y031kd6zx0zqlk6dvxzsv3isbvg9jap4gqad2jwryh0a9x3c1"; depends=[MASS]; }; MLEcens = derive2 { name="MLEcens"; version="0.1-4"; sha256="0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945"; depends=[]; }; + MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLRMPA = derive2 { name="MLRMPA"; version="1.0"; sha256="0gfbi70b15ivv76l3i0zlm14cq398nlny40aci3vqxxd0m2lyyx5"; depends=[ClustOfVar]; }; - MLmetrics = derive2 { name="MLmetrics"; version="1.0.0"; sha256="05j8hwcvfrsslib5k4w3xwkllb3rxdxazsld26zpjf3dc643ag9a"; depends=[]; }; + MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; MM = derive2 { name="MM"; version="1.6-2"; sha256="1z7i8ggd54qjmlxw9ks686hqgm272lwwhgw2s00d9946rxhb3ffi"; depends=[emulator magic Oarray partitions]; }; MM2S = derive2 { name="MM2S"; version="1.0.5"; sha256="0h10cbsdnndllwq4cb4aamjy104ckvn01skh7rixa1iqdndac9fx"; depends=[GSVA kknn lattice pheatmap]; }; MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.1"; sha256="1prx0gm9shizj45382qhja417y18jp6spk2hmgrzb7sbniyqs5pd"; depends=[Biobase]; }; + MMDai = derive2 { name="MMDai"; version="1.0.0"; sha256="0xrdynns2w3rgpf2hliyn80x3an17kpisbkpfhwsak87pbfamk9i"; depends=[DirichletReg]; }; MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; }; MMS = derive2 { name="MMS"; version="3.00"; sha256="06909912v2hr52s8k0a0830lbmdh05dcd7k47vydhbwq3rzf3ahg"; depends=[glmnet Matrix mht]; }; MMWRweek = derive2 { name="MMWRweek"; version="0.1.1"; sha256="16dwmpj13rzxmd2x7xaakw2zq2aly7ajjbfnc39qvdzk6n2x37wn"; depends=[]; }; - MNM = derive2 { name="MNM"; version="1.0-1"; sha256="0fy43jfd7wak2rfdv5hdq7zc0zsxnbz9p69g6sla0zliibafg0q6"; depends=[ellipse ICS ICSNP SpatialNP]; }; + MNM = derive2 { name="MNM"; version="1.0-2"; sha256="10ikn53filbl5qnwp9d54ds2wmzjgxp5xkkp694q75r5crl4wv65"; depends=[ellipse ICS ICSNP SpatialNP]; }; MNP = derive2 { name="MNP"; version="2.6-4"; sha256="068lssg565dw673dm8f5k6dbxl2vblnszg8wibzy3ijf96hp03cw"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; MOCCA = derive2 { name="MOCCA"; version="1.2"; sha256="04smpzn9x64w1vpw4szqa7dwnaak1ls6gpg7fgajs68mv5zivffa"; depends=[cclust clv]; }; - MODISTools = derive2 { name="MODISTools"; version="0.94.6"; sha256="0jzs2dvhq48zjzb2rj6yxws8i2h7w2k00vg7xg5riad4v9j9jk0c"; depends=[RCurl XML]; }; + MODIS = derive2 { name="MODIS"; version="1.0.0"; sha256="05p4lisdbpzvq42pvfc2hdqr5p16gkr85g4bcc5j4h4f4cva5drl"; depends=[bitops mapdata maps ptw raster RCurl rgdal rgeos sp XML]; }; + MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; + MODISTools = derive2 { name="MODISTools"; version="0.95.1"; sha256="099xh987phvya67b75c8j4z58zpqf69q3qxh280l9ka3w6pq3ljm"; depends=[RCurl XML]; }; MOJOV = derive2 { name="MOJOV"; version="1.0.1"; sha256="11mcqxw83z4xx29s34v4rsbb3zvyhlb2lmvf97b77n455gsy5hab"; depends=[aod lattice saws survey]; }; MOrder = derive2 { name="MOrder"; version="0.1"; sha256="1vhy20xyvfc18f04hvlb1jm2n0caaz8ysy13w2rra5i4kjdvz52i"; depends=[]; }; MPAgenomics = derive2 { name="MPAgenomics"; version="1.1.2"; sha256="1gwglzkip54si6i23y8s5hhkzrwmhvfyvsian9593ixy4kqlm2bz"; depends=[cghseg changepoint glmnet HDPenReg R_utils spikeslab]; }; @@ -1335,301 +1672,365 @@ in with self; { MPSEM = derive2 { name="MPSEM"; version="0.3-1"; sha256="1c4788qvvn02hnihlz56h2nsj7qfdaw3x2i7jmkd9ll2jsszav3v"; depends=[ape MASS]; }; MPTinR = derive2 { name="MPTinR"; version="1.10.3"; sha256="0281w5dhg8wmi1rz80xribq437shp4m890c504kggsacr28mbhkw"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPV = derive2 { name="MPV"; version="1.38"; sha256="1w3b0lszqmsz0yqvaz56x08xmy1m5ngl9m6p2pg9pjv13k8dv190"; depends=[]; }; - MRCE = derive2 { name="MRCE"; version="2.0"; sha256="0fnd7ykcxi04pv1af5zbmavsp577vkw6pcrh011na5pzy2xrc49z"; depends=[QUIC]; }; + MRCE = derive2 { name="MRCE"; version="2.1"; sha256="12q7mqn2qkgv992df71k1xmli61khhbfm7lw0n7z2l7qqldpiw1n"; depends=[QUIC]; }; MRCV = derive2 { name="MRCV"; version="0.3-3"; sha256="0m29mpsd3kackwrawvahi22j0aghfb12x9j18xk4x1w4bkpiscmf"; depends=[tables]; }; MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; }; - MRIaggr = derive2 { name="MRIaggr"; version="1.1.5"; sha256="0c0whxdwamli1m9xnhv9kdv7zcb0sprlhdxw3c7800s311xg0iq4"; depends=[Matrix oro_dicom oro_nifti RANN Rcpp RcppArmadillo RcppProgress ROCR spam]; }; - MRMR = derive2 { name="MRMR"; version="0.1.3"; sha256="1b3a4bkpcncl4sh7d81nk6b2dzhzqn9zhqdxv31jgippsqm2s3k2"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; + MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; }; - MRS = derive2 { name="MRS"; version="1.1"; sha256="1bzw36ba2nzic0vsr7ipmf6d5vrglf9fhlppnw4q8y81q5jla3q2"; depends=[igraph optimx Rcpp RcppArmadillo]; }; + MRS = derive2 { name="MRS"; version="1.2.1"; sha256="07kpj5q1slplqm3907yj74dkfq348a9fwfr0dzhjzdbkhph2iwpi"; depends=[igraph optimx Rcpp RcppArmadillo]; }; MRSP = derive2 { name="MRSP"; version="0.4.3"; sha256="0zv22xiq3qh9x3r2ckkvq1vv0vkcirh8y87053bqvw1m20j7q1by"; depends=[Formula matrixcalc]; }; MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MRwarping = derive2 { name="MRwarping"; version="1.0"; sha256="13bcs7rlm4irx7yzdnib558w9014a4chh9xwc010m6pxvxv36qnv"; depends=[boa SemiPar]; }; - MSBVAR = derive2 { name="MSBVAR"; version="0.9-2"; sha256="1p6n8vbrlqqq1vbqvxnn0ffmnr462gslb1jkaf4vcrndbln5cclq"; depends=[bit coda KernSmooth lattice mvtnorm xtable]; }; + MSBVAR = derive2 { name="MSBVAR"; version="0.9-3"; sha256="0ybkkl3hfff2jgz4a0z105bb0v6jl4dkkqmdg382and8w0mc496c"; depends=[bit coda KernSmooth lattice mvtnorm xtable]; }; + MSCMT = derive2 { name="MSCMT"; version="1.2.0"; sha256="0ypysx3782nipz2zgvp2h183nhak47gnjh2xvfpzqmn49vd8x0fc"; depends=[ggplot2 lpSolve]; }; MSG = derive2 { name="MSG"; version="0.3"; sha256="181kzkbw69bs3vir6dzgq7jzp8xcpg1p4isfb660vgnd1flb03ix"; depends=[RColorBrewer]; }; + MSGARCH = derive2 { name="MSGARCH"; version="0.17.7"; sha256="01n8ngk0r2hfa5vrj0mbc09kq9dj0d4fjzhszcj80mzfr47jf5vf"; depends=[adaptMCMC DEoptim dfoptim expm fanplot ggplot2 nloptr Rcpp RcppArmadillo reshape2 stringr zoo]; }; + MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; }; MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; }; - MSQC = derive2 { name="MSQC"; version="1.0.1"; sha256="1vs9kygjg9f4sr1m80hdn03gdhbdqfjamqxhbs9zha8smjrsgisw"; depends=[rgl]; }; - MST = derive2 { name="MST"; version="1.2"; sha256="1zx5gs6c8qa5b56c4z8zc96kggy5qc3fff9q7ki58zg36rbhi0wm"; depends=[MASS survival]; }; + MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; + MST = derive2 { name="MST"; version="1.3"; sha256="0qxkwkb13g6jqsiwa44izp2f3swzc7zhkprpl2qlxfs6sszr9v36"; depends=[MASS partykit survival]; }; MScombine = derive2 { name="MScombine"; version="1.1"; sha256="0kgz1l4jlhcada3fp02dscf4zx6a22cjxj251838lfz65f512hrn"; depends=[plyr]; }; MSeasy = derive2 { name="MSeasy"; version="5.3.3"; sha256="191mvg1imxfjlnd808ypn4lsjx7n6ydf16flax79hv01z7rcjylh"; depends=[amap cluster clValid fpc mzR xcms]; }; MSeasyTkGUI = derive2 { name="MSeasyTkGUI"; version="5.3.3"; sha256="0ihz8vr2wbgy88bzssilgvlhkbr13jznfjvnqy73wpchqgwy0wy6"; depends=[MSeasy]; }; MSwM = derive2 { name="MSwM"; version="1.2"; sha256="01l23ia20y3nchykha4vz6sa757zmbvgx2315cacxfcqk9rgs08c"; depends=[nlme]; }; + MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; MTS = derive2 { name="MTS"; version="0.33"; sha256="0i7kpgsw56vvgrdgddn83i9lzjlb72z4llffqai29qq0m1i7hm65"; depends=[fGarch mvtnorm Rcpp]; }; - MTurkR = derive2 { name="MTurkR"; version="0.7.0"; sha256="0hs5qj4ngjpwgm0wjhkdf68cpyvvmf1d49za3mighqpqzib9z36w"; depends=[base64enc curl digest XML]; }; + MTurkR = derive2 { name="MTurkR"; version="0.8.0"; sha256="0q498chr2s67ai7lfxi6kdficqbs5sxj9asyv69z2a37fmsr4va7"; depends=[base64enc curl digest XML]; }; MTurkRGUI = derive2 { name="MTurkRGUI"; version="0.1.5"; sha256="1rlgz80na0v1nx70cda1fzyswlb1lg5kcx64zl9dcqy6accsrpmp"; depends=[curl MTurkR XML]; }; MUCflights = derive2 { name="MUCflights"; version="0.0-3"; sha256="03ksvv5nyzlqiml1nz405r3yqb2cl35kpm1h61zcv2nqq8cxqshs"; depends=[geosphere NightDay RSQLite sp XML]; }; MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; - MVN = derive2 { name="MVN"; version="4.0"; sha256="1ql50ch6qig7r0xnfv5f74k3vc32k04jgmvjbndgyzbacn2ibrm7"; depends=[MASS moments mvoutlier nortest plyr psych robustbase]; }; - MVR = derive2 { name="MVR"; version="1.30.3"; sha256="164q259c1j7da3mcc79zjyisxzr5p4rdaps4dcxfvpfbwg1wkdyj"; depends=[statmod]; }; + MVLM = derive2 { name="MVLM"; version="0.0.1"; sha256="1vl6wn7ryn529bhx2l5frw89dqn79bnk4qfih4mj1dyycwh3h4fj"; depends=[CompQuadForm]; }; + MVN = derive2 { name="MVN"; version="4.0.2"; sha256="0k8fbhnw2lbjgafab4m6j7nkzclj1226fdiv8bmv5vcm6g82nb19"; depends=[MASS moments mvoutlier nortest plyr psych robustbase]; }; + MVR = derive2 { name="MVR"; version="1.31.0"; sha256="114qv235dmbmdlg2dssbgn0bj78r6khg58xswvv98d58kfypw581"; depends=[statmod]; }; MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; - MVar_pt = derive2 { name="MVar.pt"; version="1.6"; sha256="09ln186nx713kp9kdi4zwxmg7kjzksh7skxkgf1mq8szvvzb1r8n"; depends=[]; }; - MXM = derive2 { name="MXM"; version="0.8"; sha256="0929nk4h7vjs0fx7m9mvm5lrby5bp6jwjbzgv71h1vpgbm2sfqdm"; depends=[betareg doParallel foreach Hmisc lme4 MASS nnet ordinal pscl quantreg ROCR speedglm survival TunePareto]; }; + MVar_pt = derive2 { name="MVar.pt"; version="1.9.6"; sha256="0gwprgf22lna4d8bifq381p5hv7ws3nnj08m6rrjnisgl158459w"; depends=[]; }; + MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; + MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; + MXM = derive2 { name="MXM"; version="0.9.8"; sha256="1bi8lkw3dx5m2p6r8yr60ysxs0ijkaahjvh7c8q7vlg8116fdvbp"; depends=[doParallel e1071 energy foreach lme4 MASS nnet ordinal quantreg relations Rfast speedglm survival visNetwork]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; + MagneticMap = derive2 { name="MagneticMap"; version="1.0"; sha256="1634bk6x92z01gyiy89c1g6z5cjsj8pf4f358y7rk2kppmfz4cf7"; depends=[scatterplot3d]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; - ManlyMix = derive2 { name="ManlyMix"; version="0.1.2"; sha256="0fa1wqz3fnq838azqd42937l5z1sk76cxbg8vpzx7sxxmn1v1a08"; depends=[]; }; - ManyTests = derive2 { name="ManyTests"; version="1.1"; sha256="11xk3j2q7w6b6ljmp7b8gni0khpmpvcvzwxypy0w8ihi2gaczsxj"; depends=[]; }; + Mangrove = derive2 { name="Mangrove"; version="1.21"; sha256="1qf3fjzf0sb6fqbfdbxwbw6wah3gg2qran4mgg13hcmk4n3j0hxp"; depends=[]; }; + ManifoldOptim = derive2 { name="ManifoldOptim"; version="0.1.2"; sha256="0ywkd4i9bxavxffh89sxcz995vfnk1czcvcjdwzbvrpxa5fwbx79"; depends=[Rcpp RcppArmadillo]; }; + ManlyMix = derive2 { name="ManlyMix"; version="0.1.7"; sha256="10m5kfs8n34frygn36ryn4h8128p4smmr5s2ngbbj05dchni09ai"; depends=[]; }; + ManyTests = derive2 { name="ManyTests"; version="1.2"; sha256="1mi7wvnkcd95126f1h8vl8skn397yd2zqvcswprqar54p161wgyi"; depends=[]; }; Map2NCBI = derive2 { name="Map2NCBI"; version="1.1"; sha256="19gafyql767f1p4fxdw7d5a8z1b4vg7jfrvzaml5x16fj6c78fjm"; depends=[]; }; - MapGAM = derive2 { name="MapGAM"; version="0.7-5"; sha256="0bpswdi7iic7hsqrwcxwv27n4095m292nv5db6d4mj9gvp13h7i7"; depends=[gam maptools sp]; }; - MareyMap = derive2 { name="MareyMap"; version="1.3.1"; sha256="1ql9mvmlw2m8b35dmv6c7338jzmnizdjwxf7m12m55cf6vf8lph8"; depends=[tkrplot]; }; - MarkowitzR = derive2 { name="MarkowitzR"; version="0.1502"; sha256="0srrmzr4msn04w5f6s6qs51db8jccpfj10sighsv1l7d056n2xjn"; depends=[gtools matrixcalc sandwich]; }; - MasterBayes = derive2 { name="MasterBayes"; version="2.52"; sha256="12ka2l4x6psij7wzbb98lwx5shgwzn5v44qfpiw1i6g236yp0mhm"; depends=[coda genetics gtools kinship2]; }; - MatchIt = derive2 { name="MatchIt"; version="2.4-21"; sha256="02kii2143i8zywxlf049l841b1y4hqjwkr1cnyv6b8b7y7lz2m5v"; depends=[MASS]; }; + MapGAM = derive2 { name="MapGAM"; version="1.0"; sha256="1hzv3sy2szxl4fhnnzlwagh3qm4z22cbhiwi8whgn5ymwlnw0pca"; depends=[gam maptools sp survival]; }; + MareyMap = derive2 { name="MareyMap"; version="1.3.3"; sha256="0d8prx08321f0p42xbnf0b1446fq4km35xs3ih5ssbdm14q7fnln"; depends=[tkrplot]; }; + MarkowitzR = derive2 { name="MarkowitzR"; version="0.9900.0"; sha256="1wyqlgmb376dsvx7nixpbynjzp7xpmsh4fx9s7nai6fhjb50mxha"; depends=[gtools matrixcalc sandwich]; }; + MasterBayes = derive2 { name="MasterBayes"; version="2.54"; sha256="016xk43mhl4249p3wsx0v68b69nmp7zllaa0c1in5l18g5v0npi0"; depends=[coda genetics gtools kinship2]; }; + MatchIt = derive2 { name="MatchIt"; version="2.4-22"; sha256="16j7kwnr94736p58a9fsjydkbixm71jgdmgfcvmr26c8r5q89042"; depends=[MASS]; }; + MatchItSE = derive2 { name="MatchItSE"; version="1.0"; sha256="01ghv3hdlsx6ypvsh7k0mi20yc8vg7z602mhcprhhh97qsb81v6h"; depends=[Rcpp RcppArmadillo]; }; MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; }; Matching = derive2 { name="Matching"; version="4.9-2"; sha256="0lv5b41l797c4bl2rzmdqzjnn47zpvvcv3md3xwxvvz5knxky5x4"; depends=[MASS]; }; MatchingFrontier = derive2 { name="MatchingFrontier"; version="1.0.0"; sha256="1djlkx7ph8p60n2m191xq9i01c2by4vpmjj25mbxy5izxm5123aa"; depends=[igraph MASS segmented]; }; - Matrix = derive2 { name="Matrix"; version="1.2-4"; sha256="1ikrzc17bi0b5ldz63cgyfjmgf7pp8xv7xnx131n3gigl31nz6wd"; depends=[lattice]; }; - Matrix_utils = derive2 { name="Matrix.utils"; version="0.5"; sha256="04ss99wbpcm7ad5kkznppyf5fa869fgghk4rhv0nds1fdp17hrzl"; depends=[Matrix]; }; - MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.8.0"; sha256="1xn21ngxyr3jj07whlclpikmp1hd59wp3i76ql2r8vwczx8nwxil"; depends=[plotrix pracma progress rARPACK Rcpp RcppArmadillo]; }; + Matrix = derive2 { name="Matrix"; version="1.2-8"; sha256="1dyv42d7ranb85y8hvi57hbg5xnvhdzqn56wcq3qmhazqj3s3liw"; depends=[lattice]; }; + Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.5"; sha256="057lms2xdp13wcglg8hg95blj60f5zhva26jlkm2z1vi11jiy728"; depends=[grr Matrix]; }; + MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9"; sha256="0yax7ali6g8i5qwgrhg1m6f8vi0c2rlyfjc2l9ar0kj5zg1dix86"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.1.1"; sha256="1bvfhzhvm1psgq51kpjcpp7bidaxcrxdigmv6abfi3jk5kyzn5ik"; depends=[]; }; + MatrixLDA = derive2 { name="MatrixLDA"; version="0.1"; sha256="19q6wl8fc6jzn7544qnlpzfh9v0xlg9cr78l6k8kx6kzjnbnyh9z"; depends=[glasso plyr Rcpp RcppArmadillo]; }; MatrixModels = derive2 { name="MatrixModels"; version="0.4-1"; sha256="0cyfvhci2p1vr2x52ymkyqqs63x1qchn856dh2j94yb93r08x1zy"; depends=[Matrix]; }; MaxPro = derive2 { name="MaxPro"; version="3.1-2"; sha256="1y2g8a8yvzb24dj0z82nzfr6ylplb9sbi2dmj7f3pb4s3yr5zm8y"; depends=[nloptr]; }; - MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-0"; sha256="0001kj0wnma4gmndxwz11dq6jq7kgcrvlw9iikf2w15lnmmihwzl"; depends=[ggplot2 raster]; }; - MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.4.3"; sha256="0ysfs03as0h4d0nwk40fhm6v9rf1rr0mfwdc5d5y8iigagqzcj9s"; depends=[dplyr rgdal rgeos rvest sp stringr]; }; + MaxSkew = derive2 { name="MaxSkew"; version="1.0"; sha256="1ylz51b9k6bi6xm1aarv7aff1n35bwb66nk1vzzkyqn9pylhmcmw"; depends=[]; }; + MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-2"; sha256="0mk5h9bafy1ndi1h6vcjh285xfj38gjpiz6n8xcmp8zh6vi6gx70"; depends=[ggplot2 raster]; }; + MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.4.8"; sha256="007i1zmklcmj76kmyl60wvcgb9vzrn677k81n5mmfz36vr0zkp8f"; depends=[dplyr lubridate rgdal rgeos rvest sp stringr xml2]; }; McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; Mcomp = derive2 { name="Mcomp"; version="2.05"; sha256="0wggj0h0qxjwym1vz1gk9iwnwia4lpjlk6n46l6hinsdax3g221y"; depends=[forecast tseries]; }; - MeanShift = derive2 { name="MeanShift"; version="1.0-2"; sha256="1dj3zgqyggl4vyz2j008c33600j7cjkqh20zs46wy95yfhjj6jf9"; depends=[]; }; + MeanShift = derive2 { name="MeanShift"; version="1.1-1"; sha256="02zf27xvk2zlmgxfyl5pwl2rdq8c30fb52x1mbpvlhmxjbhg6fsn"; depends=[wavethresh]; }; MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; - Mediana = derive2 { name="Mediana"; version="1.0.2"; sha256="1q3i5j319gb8h3qvz2m1mds2a1042dzs8x5xln0v6fzc0k4nzyjr"; depends=[doParallel doRNG foreach MASS mvtnorm ReporteRs survival]; }; + Mediana = derive2 { name="Mediana"; version="1.0.4"; sha256="0kk9gv2dzhg1y8s68aws327ysx33cy622djbfd5isbr7ikv2h80v"; depends=[doParallel doRNG foreach MASS mvtnorm ReporteRs survival]; }; + MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.2.0"; sha256="1rnsjrvshj41srbzrplfhqw5y68dab489rjn5bdhrk1lm0vz0zvc"; depends=[ggplot2 knitr plotly rmarkdown robustbase stargazer]; }; MenuCollection = derive2 { name="MenuCollection"; version="1.2"; sha256="0v3flicfnln9qld150yk3rfldvsr4dllhq80l02n1lq6px38nf2s"; depends=[gplots RGtk2 RGtk2Extras]; }; MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; + MetFns = derive2 { name="MetFns"; version="2.2.0"; sha256="16l55wrbxhpyy97ihw606s41zbvmshygdfjxladhca0pf7zpj29y"; depends=[astroFns fBasics lubridate plotrix spatial]; }; MetNorm = derive2 { name="MetNorm"; version="0.1"; sha256="0vfi3k0yp2dz47gwj1n1avs3ji0a2nlrrljz5d0l66zfh4474jb4"; depends=[]; }; + MetProc = derive2 { name="MetProc"; version="1.0.1"; sha256="1z6538pij1rq5wv9s8rjcn0sck15y26asv4vamav8a6s4135ia3q"; depends=[fastcluster gplots]; }; MetSizeR = derive2 { name="MetSizeR"; version="1.1"; sha256="11hdmpvnszr6pn9ihb3zjy9miksz1fs4piry153z4dic8pjydkax"; depends=[cairoDevice gWidgets gWidgetsRGtk2 MetabolAnalyze mvtnorm]; }; MetStaT = derive2 { name="MetStaT"; version="1.0"; sha256="0400gx6i8xlkm51da98ap91c3hgrkgfgxswn0plaxfry3625khkp"; depends=[abind MASS pls]; }; + MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.1.0"; sha256="1kzdk21xpbvwibs8501zwdb9lzj7g5nv2zqaskg9x0szshhg8vpp"; depends=[gnm]; }; MetaDE = derive2 { name="MetaDE"; version="1.0.5"; sha256="1ijg64bri5jn2d3d13q1gvvfyqmbh6gn0lk6dkihixf0jwvjdyqi"; depends=[Biobase combinat impute survival]; }; - MetaLandSim = derive2 { name="MetaLandSim"; version="0.4.2"; sha256="00lx78ryrhqcd7p9nikmfs80ysid11b2cg4nnf857h3lgnms78rr"; depends=[Biobase e1071 fgui googleVis maptools minpack_lm raster rgeos rgrass7 sp spatstat]; }; + MetaIntegrator = derive2 { name="MetaIntegrator"; version="1.0.3"; sha256="0611k497ixy0f51lmqzs08zqqq5krrxrm7m0xqdl18gkwrw3w656"; depends=[Biobase DBI GEOmetadb GEOquery ggplot2 gplots multtest preprocessCore reshape rmeta Rmisc RMySQL RSQLite stringr]; }; + MetaLandSim = derive2 { name="MetaLandSim"; version="0.5.5"; sha256="11dwmhkka0yabgvcxys2w039xwd1brb4kd1g1ahs45cin7w79xvl"; depends=[Biobase e1071 fgui googleVis maptools minpack_lm raster rgeos rgrass7 sp spatstat]; }; MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; MetaQC = derive2 { name="MetaQC"; version="0.1.13"; sha256="11595ggjr46z6xiwmhiyx1sydaq68l18y7mgdwxsg81g03ck9x1r"; depends=[foreach iterators proto]; }; MetaSKAT = derive2 { name="MetaSKAT"; version="0.60"; sha256="13qffirv0lnj0bflzjpr2hd0d8j4bkakyfjvicp40f0v4v3cack2"; depends=[SKAT]; }; + MetaboList = derive2 { name="MetaboList"; version="1.0"; sha256="0gfv093l5s5gy98qcz49kr1qk8afkz1hm0hrd9a7k4r54fn6vx3c"; depends=[enviPick]; }; + MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3"; sha256="0cl76x6imx4a95wd74xx5s8i2vg8wq3inqgakvgzmkwxad6qhrqp"; depends=[ellipse gplots gtools mclust mvtnorm]; }; + MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; }; Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; }; Meth27QC = derive2 { name="Meth27QC"; version="1.1"; sha256="0ad30svs2kjzmmyvcm0jmv64iyq7slp1x1xl35h2rv1b6zbd4658"; depends=[gplots]; }; MethComp = derive2 { name="MethComp"; version="1.22.2"; sha256="0f9l36d00x054yqgbw0dckc7ldlgap6vnbb03n6n5yz47xxg0ic3"; depends=[nlme]; }; + MethodCompare = derive2 { name="MethodCompare"; version="0.1.0"; sha256="0zl20v8k8bhn3skbpzdiglywrqghwf0r42q2jn8zmq4x0drvjzpl"; depends=[nlme]; }; Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; + MethyBayes = derive2 { name="MethyBayes"; version="0.1.0"; sha256="1ibjmnfx3d2hw6gjcyig6kv4q7p26am2xvj14ksjv9kglw2q4g1b"; depends=[]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; Metrics = derive2 { name="Metrics"; version="0.1.1"; sha256="1yqhlsmhh9sl7qngl85b7qb980s54h13wwznpakyvvwlar64yqrw"; depends=[]; }; - MfUSampler = derive2 { name="MfUSampler"; version="1.0.0"; sha256="0jl0vnjj0kyy49l51nh6xzp53h8wcb603v2p9wznplimskays2rh"; depends=[ars coda HI]; }; + MfUSampler = derive2 { name="MfUSampler"; version="1.0.2"; sha256="0b79wm02p4k67pi0zmcs7bqwsgrnf2pqf2mbb2kylmgsjd0nj1gq"; depends=[ars coda HI]; }; + MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[ArgumentCheck cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; MiRSEA = derive2 { name="MiRSEA"; version="1.1"; sha256="0jpl6ws5yx1qjzdnip9a37nmvx81az4cbsjm57x613qjpwmg6by3"; depends=[]; }; + MiSPU = derive2 { name="MiSPU"; version="1.0"; sha256="1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply"; depends=[ape aSPU cluster Rcpp RcppArmadillo vegan]; }; MiST = derive2 { name="MiST"; version="1.0"; sha256="0gqln792gixqfh201xciaygmxbafa0wyv5gpbg9w5zkbbv44wrfk"; depends=[CompQuadForm]; }; - MicSim = derive2 { name="MicSim"; version="1.0.11"; sha256="0g6rqdk6vxxymkg6c0yqhhv7za1sk30m4wpi954cvx50swszy4ps"; depends=[chron rlecuyer snowfall]; }; - MicroDatosEs = derive2 { name="MicroDatosEs"; version="0.7.1"; sha256="0avgp99krlcaava7m32gj7ffz2rrj8g1zvaipk7bgsadnnpljmsk"; depends=[Hmisc memisc]; }; + MicSim = derive2 { name="MicSim"; version="1.0.12"; sha256="186m0p08h6x8zhk82sm1hsyrqdl3p872xn03ysv3g5bldglc9677"; depends=[chron rlecuyer snowfall]; }; + MicroDatosEs = derive2 { name="MicroDatosEs"; version="0.8.2"; sha256="0k0hmi3ciipizmgjw1i5rrsg34yx21s1msn40vc4qc9s1n4wd8dl"; depends=[readr]; }; MicroStrategyR = derive2 { name="MicroStrategyR"; version="1.0-1"; sha256="0a6bk0wnwx8zy9081n7wb12lidgckrhn350r0q5m6aa82l6l8ihi"; depends=[gWidgetsRGtk2]; }; MigClim = derive2 { name="MigClim"; version="1.6"; sha256="171pnalidyw0v2fcjdc3kyrq5kg035kwj5xl8zwgn3hlanpaljvp"; depends=[raster SDMTools]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; }; - MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-4"; sha256="0ixlybm57r1pdsnibg429hzbwh70brl8j8gjfzx952c69znkkjwh"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; + MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.0"; sha256="03305ds3rgr29z4idaxzsm83igiygna2sqd5vpixklngsrp8w341"; depends=[mvtnorm]; }; - MixAll = derive2 { name="MixAll"; version="1.1.1"; sha256="02vbxpgyh2lw2xw04k0pfjs682xzha2wpr6w7qdg42mg335l12h3"; depends=[Rcpp rtkpp]; }; - MixGHD = derive2 { name="MixGHD"; version="1.8"; sha256="0m115ws1gh5mbjaql38piwjg7463mx32ridpbics3406g7p3ba6w"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; + MixAll = derive2 { name="MixAll"; version="1.2.0"; sha256="09wwisdwgvcsnvb9jdr0p0gyai5ab06yjyqhac1i7jg6wa2r8m3g"; depends=[Rcpp rtkore]; }; + MixGHD = derive2 { name="MixGHD"; version="2.1"; sha256="0f3ppj18acvr35dbgqibmpd58cymq3baw3jdrl4ranlk0nj6h26r"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; }; + MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; }; + MixSIAR = derive2 { name="MixSIAR"; version="3.1.7"; sha256="0myn50sdmp83bhzm66sa61xwxv3lka427mv1ynhqshaqrb5flj35"; depends=[coda compositions ggmcmc ggplot2 lattice MASS R2jags RColorBrewer reshape reshape2 rjags]; }; MixSim = derive2 { name="MixSim"; version="1.1-2"; sha256="0p67x2q4rb7y5484gi4z8r3qxpav1hdmgw1wdxmiz363p6f8972v"; depends=[MASS]; }; MixedDataImpute = derive2 { name="MixedDataImpute"; version="0.1"; sha256="123c9i3znv53ikfnga1z9gq5bdl4vyww89967255wg5dzb7w00cn"; depends=[BH gdata Rcpp RcppArmadillo]; }; - MixedPoisson = derive2 { name="MixedPoisson"; version="1.0"; sha256="1w826s2icdflfgyb31dvf077b6fx35idajyqv7bln1fr8wfb7zyf"; depends=[gaussquad MASS]; }; + MixedPoisson = derive2 { name="MixedPoisson"; version="2.0"; sha256="0g5mpzj0wda6g46q3cg5mm3x4dvpz9gdclzn2m17l62lzny2i10p"; depends=[gaussquad MASS Rmpfr]; }; MixedTS = derive2 { name="MixedTS"; version="1.0.4"; sha256="0gwcg115idbcm5llgzqsygvqgshq8dywawxkaddsmw4sbbhj4555"; depends=[MASS]; }; - MixtureInf = derive2 { name="MixtureInf"; version="1.0-1"; sha256="1cq8zzhhb6vg545n9aw1b9fhx025zy75dd6pw161svsb5776py5d"; depends=[]; }; + MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; }; MoTBFs = derive2 { name="MoTBFs"; version="1.0"; sha256="09ymfgw6psc1y0dczvsrsw5cki58wn0d8vj56ydfylrxn24g3jfq"; depends=[bnlearn lpSolve quadprog]; }; Mobilize = derive2 { name="Mobilize"; version="2.16-4"; sha256="16vdvpwspa0igb52zvzyk0if9l4wq1hm8y42572i8sh1m82wyyfs"; depends=[ggplot2 Ohmage reshape2 wordcloud]; }; Modalclust = derive2 { name="Modalclust"; version="0.6"; sha256="16h90d30jwdrla5627rva0yf69n0zib9z5fl3k5awlqfscz4fw26"; depends=[class mvtnorm zoo]; }; ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; - ModelMap = derive2 { name="ModelMap"; version="3.3.2"; sha256="04rnprv5xjk9l89pc7pvkvwpv0habd15ihl1ah792lwl44ibx84b"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; - Momocs = derive2 { name="Momocs"; version="1.0.0"; sha256="03gqylk1a6sf4ypxp7gzsv91m6iarfak6rby0i1666wzi4nn5zjl"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS plyr reshape2 sp]; }; + ModelMap = derive2 { name="ModelMap"; version="3.3.5"; sha256="1rmm1a2nw91kzvxpvq9qhlag0dhihis7mgscgslqia6z8fr86qvs"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; + ModelMetrics = derive2 { name="ModelMetrics"; version="1.1.0"; sha256="119xxmzb5biq7k1yxqsf0jmmarmfn6lds9x9hfgv593xlpym6za8"; depends=[Rcpp]; }; + Momocs = derive2 { name="Momocs"; version="1.1.0"; sha256="0r9q1ag25fcj9zl0vd5d6c6ijpildmqi2p7fnmhcp023x026sy2v"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS plyr reshape2 sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; - MonetDBLite = derive2 { name="MonetDBLite"; version="0.2.0"; sha256="1l6bkymssryw22m849wdcmza9abg0cwgasdq9hq4z1m9fkc5xais"; depends=[]; }; - MonoPhy = derive2 { name="MonoPhy"; version="1.1"; sha256="0vif66c5lkn1mqfhnk4di5jd5k86wf545a8pi0wlamjy5828n9jx"; depends=[ape phangorn phytools RColorBrewer taxize]; }; - MonoPoly = derive2 { name="MonoPoly"; version="0.2-10"; sha256="03gzn7gq1dryjhkzs9z5i7bc8k8i7ilri26ifw772w8688pya05k"; depends=[quadprog]; }; - Morpho = derive2 { name="Morpho"; version="2.3.1.1"; sha256="02xmbkz5qm15k0skwqcgzjxwkv9aas5ygi4dchc656j8r7spw6wp"; depends=[colorRamps doParallel foreach Matrix Rcpp RcppArmadillo rgl Rvcg yaImpute]; }; + MonetDBLite = derive2 { name="MonetDBLite"; version="0.3.1"; sha256="1lbymf7kh3jag7qhb873mw2g66xp1589w2linp0r7kx0ia86rqd3"; depends=[codetools DBI digest]; }; + MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; + MonoPhy = derive2 { name="MonoPhy"; version="1.2"; sha256="0997kg8hfwgsc9s155z0wrf7rrhn3vf6681j9psjl3hsspg08z2r"; depends=[ape phangorn phytools RColorBrewer taxize]; }; + MonoPoly = derive2 { name="MonoPoly"; version="0.3-8"; sha256="1dd2m4c726j94cxwsma33sc166c9656m7sl2b29bg6i0bmpvpmd2"; depends=[quadprog]; }; + Morpho = derive2 { name="Morpho"; version="2.4.1.1"; sha256="0wshfxxkbwwnj92law22wdfxw8hai1s576hi6gq2lda0684ccyvb"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; + MortHump = derive2 { name="MortHump"; version="0.1"; sha256="0wks6kis1fa7vgcmwhaq57zrlk5m0c5rgkfipz64phky02c7v4c2"; depends=[demography HMDHFDplus Matrix minpack_lm MortalitySmooth RColorBrewer WeightedCluster]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; - MotilityLab = derive2 { name="MotilityLab"; version="0.2-4"; sha256="0fgv3w1231r85jv7v59vvfz9bcb4yrdvx89pk9g6zcspxixmc0c8"; depends=[ellipse]; }; - MplusAutomation = derive2 { name="MplusAutomation"; version="0.6-3"; sha256="1zb4drqaswzwssky1bp69p3p8inqfdvxg2ji9bjrzf3vf0b5fl4p"; depends=[boot coda gsubfn lattice plyr texreg xtable]; }; + MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; }; + MplusAutomation = derive2 { name="MplusAutomation"; version="0.6-4"; sha256="151d2iq9v8d584ascpkjp9wjldc7n25wma14nn2wgcxwdh2nglpi"; depends=[boot coda gsubfn lattice pander plyr texreg xtable]; }; Mposterior = derive2 { name="Mposterior"; version="0.1.2"; sha256="16a7wvg41ld2bhbss480js5h12r41nl7jmc3y4jsbv1lr5py4ymy"; depends=[Rcpp RcppArmadillo]; }; MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; }; MuMIn = derive2 { name="MuMIn"; version="1.15.6"; sha256="08qac7d1w367wjsz7n9ydziacbf8np8w8mm9izbxd4pk3ibxwi5a"; depends=[Matrix]; }; MuViCP = derive2 { name="MuViCP"; version="1.3.2"; sha256="1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4"; depends=[gtools MASS sm]; }; + MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; MultEq = derive2 { name="MultEq"; version="2.3"; sha256="0fshv7i97q8j7vzkxrv6f20kpqr1kp9v6pbw50g86h37l0jghj7r"; depends=[]; }; - MultNonParam = derive2 { name="MultNonParam"; version="1.2.1"; sha256="0fakycqvc8kqavdxmwsfww21f6ndlr0zwwwgh6asjffpdji798bb"; depends=[]; }; + MultNonParam = derive2 { name="MultNonParam"; version="1.2.5"; sha256="12jfpqs77qxzy7vj6adx9im3qmzqvgwk4bnxmr26k3z48css242l"; depends=[]; }; + MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; - MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.0"; sha256="1kkbwh9sinwnsc1qb2rsqdvhz1v0kg0av4m8av4dcmry2iq8kd3v"; depends=[fastGHQuad]; }; - MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.9"; sha256="0anb041nd56rrryhv5w1pb0axxsfkqas177r6yf5h5gbc4vn3758"; depends=[limSolve MASS]; }; + MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.2.0"; sha256="00prkn5awxrh365j1jz312har1x4p8v52a0sqfy00pqr44ncmqqq"; depends=[fastGHQuad Matrix mvtnorm]; }; + MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.10"; sha256="0p0m6kbpx761l54fblnxccjadrjgv50lg24adppnrda4dbai60v9"; depends=[limSolve MASS]; }; MultiMeta = derive2 { name="MultiMeta"; version="0.1"; sha256="0gj0wk39fqd21xjcah20jk16jlfrcjarspbjk5xv74c9k4p5gmak"; depends=[expm ggplot2 gtable mvtnorm reshape2]; }; - MultiOrd = derive2 { name="MultiOrd"; version="2.1"; sha256="12y5cg06qyaz72gk3bi5pqkd55n72rz056y9va49znlsqph09x2x"; depends=[corpcor Matrix mvtnorm psych]; }; + MultiOrd = derive2 { name="MultiOrd"; version="2.2"; sha256="0j7zl6a2yxiixxjrhwrp5z4wdi04fqc8qfq2hp0q02k28dzjg1g1"; depends=[corpcor Matrix mvtnorm psych]; }; MultiPhen = derive2 { name="MultiPhen"; version="2.0.1"; sha256="1gvsivx8qz5yl4rc4db8sg2llg8s4bgkg22aanvr01h649a08m16"; depends=[abind epitools gplots HardyWeinberg MASS meta RColorBrewer]; }; MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; }; MultiSV = derive2 { name="MultiSV"; version="0.0-67"; sha256="0924lvkx12aqjxxz8bwqdi4h9xc2acf8aynllx0m45ip5r4gh1g2"; depends=[nlme reshape]; }; MultinomialCI = derive2 { name="MultinomialCI"; version="1.0"; sha256="0ryi14d102kvxawls04hcw50n79jkcn29ill77lkfvj6nlzj8i5q"; depends=[]; }; - MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.0"; sha256="1q1dcrn4wghhn0ailyvhvv3j2n62x1x4sd3lj20j7w1ix9zgsk6l"; depends=[bootstrap]; }; - MvBinary = derive2 { name="MvBinary"; version="1.0"; sha256="1r65kcx458b0y49035nd1sj7rm62fr2inc3qgg5k6saylqihncn9"; depends=[mgcv]; }; + MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.1.2"; sha256="1xp1bdkp87kvgsg4q5b91r712l6sdvmlcvaychi72pvgv33a8x11"; depends=[bootstrap Rcpp]; }; + MvBinary = derive2 { name="MvBinary"; version="1.1"; sha256="1lrrxvphxv4gmlazx67q4bck9373nqylqgkwcjzwb52291a3zyiv"; depends=[mgcv]; }; Myrrix = derive2 { name="Myrrix"; version="1.1"; sha256="15w1dic6p983g2gajbm4pws743z68y0k2hxrdwx6ppnzn9rk07rs"; depends=[Myrrixjars rJava]; }; Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-1"; sha256="0dy82l0903pl4c31hbllscfmxrv3bd5my5b2kv5d3x5zq0x99df0"; depends=[rJava]; }; NADA = derive2 { name="NADA"; version="1.5-6"; sha256="0y7njsvaypcarzygsqpqla20h5xmidzjmya4rbq39gg6gkc0ky27"; depends=[survival]; }; - NAM = derive2 { name="NAM"; version="1.4.4"; sha256="0410sxmqibw8iq398ha2ldf7p2vkqiryhfd176njjb8zxy9nixal"; depends=[randomForest Rcpp]; }; + NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; }; + NAM = derive2 { name="NAM"; version="1.5.0"; sha256="01p0xncaly7pxc9fpiqh77z0pq6cbbskj40r7rhhbiad5pdihb0r"; depends=[randomForest Rcpp]; }; NAPPA = derive2 { name="NAPPA"; version="2.0.1"; sha256="0nn4wgl8bs7sy7v56xfif7i9az6kdz9xw7m98z1gnvl2g7damvn3"; depends=[NanoStringNorm plyr]; }; NB = derive2 { name="NB"; version="0.9"; sha256="1gh42z7lp6g09fsfmikxqzyvqp2874cx3a6vr96w43jfwmgi2diq"; depends=[]; }; NBDdirichlet = derive2 { name="NBDdirichlet"; version="1.3"; sha256="1657mqwn5i1b0g0gva387zl02vpymn98f71b0p7i7xv033mqnpqw"; depends=[]; }; NBPSeq = derive2 { name="NBPSeq"; version="0.3.0"; sha256="0l4ylxhs2k9ww21jjqs67fygk92avdchhx2y1ixzl7yr2yh1y9by"; depends=[qvalue]; }; - NCA = derive2 { name="NCA"; version="1.1"; sha256="11sx5y9i0y0c8r9z6lwjk4p9l4gmwj58i76z809l40mlld59igcz"; depends=[Benchmarking gplots quantreg sfa]; }; - NCmisc = derive2 { name="NCmisc"; version="1.1.4"; sha256="0hbrad72lzp0vi0j9lvpmvdih7vijqghqng1f0hjd8fg8hjvcflg"; depends=[dplyr proftools]; }; + NCA = derive2 { name="NCA"; version="2.0"; sha256="08951mmmpziljclwzmbni1s5a62wr9s80iyfsr07gkdz4sx3cvqf"; depends=[gplots KernSmooth quantreg sfa]; }; + NCmisc = derive2 { name="NCmisc"; version="1.1.5"; sha256="1dq38ac97l8b6ys3yxqnndbrp8fa8zfw0lr4nq2421sn91769w22"; depends=[proftools]; }; + NEArender = derive2 { name="NEArender"; version="1.4"; sha256="1zdqil28j6jc6317dkpz5i1qj7b4i3lin4800n1kf14zg9nxjdyg"; depends=[MASS RColorBrewer ROCR]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; - NEpiC = derive2 { name="NEpiC"; version="1.0"; sha256="1pz6n8frf8ggivrsb6z5x7aq3k13l4ksdbkzk5ndm09whdn5fzn5"; depends=[igraph]; }; + NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; + NFP = derive2 { name="NFP"; version="0.99.2"; sha256="1wnllzlww8257sbrgvfyvd21qvhf7j17mcpf6d4p6binaw8svnsb"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; }; NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; }; - NHMM = derive2 { name="NHMM"; version="3.5"; sha256="03il5y6vz5zyadydhk3qg6sd6fmsw7md9if1igyy9643mxxm1g0f"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; - NHMSAR = derive2 { name="NHMSAR"; version="1.1"; sha256="1qbgxb684qwcb29x95a48r6bndqwdi1drwzimkhkb2ldm98yga3z"; depends=[caTools glasso lars SIS ucminf]; }; + NHMM = derive2 { name="NHMM"; version="3.7"; sha256="0h6m01y42yswjgx3cfj4xwj0wq9nw0gzjz7vf9prm3vag3wnfs2q"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; + NHMSAR = derive2 { name="NHMSAR"; version="1.4"; sha256="12szfj9lssx2x3ng99q34f2knn4b7588dz8b307fhqj4r0f8iqh3"; depends=[caTools glasso lars ncvreg SIS ucminf]; }; NHPoisson = derive2 { name="NHPoisson"; version="3.1"; sha256="1gr682kxgw227yqw9w0iw9lrijsz5iszhnfk0mdhi6m1w9s28kcn"; depends=[car]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; - NISTunits = derive2 { name="NISTunits"; version="1.0.0"; sha256="156rk3wams52lw3inf55s9v7mi5x29mmb41p8kvryimnzgi904ca"; depends=[]; }; - NLP = derive2 { name="NLP"; version="0.1-9"; sha256="0rszp2iakbaj4z76jdi9z996xxgyyp0pqkxgnva0jcfi5sq3ngxr"; depends=[]; }; - NLPutils = derive2 { name="NLPutils"; version="0.0-3"; sha256="1j6y9z8d4ms6lxrz9wq9ydvsnkf4ca5qps8yxmglx81i152aq216"; depends=[NLP qdap SnowballC]; }; + NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; + NLP = derive2 { name="NLP"; version="0.1-10"; sha256="1jq9nhm2dzm0ppwlrxgbwk92dh1zwhcxjn13zaw8naiz8zffba63"; depends=[]; }; + NLPutils = derive2 { name="NLPutils"; version="0.0-4"; sha256="1dqbf8xmrzx81ybmp5qkd5a5rw3c19l2wxfnpddij4a1n074bwym"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; NMF = derive2 { name="NMF"; version="0.20.6"; sha256="0mmh9bz0zjwd8h9jplz4rq3g94npaqj8s4px51vcv47csssd9k6z"; depends=[cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; NMFN = derive2 { name="NMFN"; version="2.0"; sha256="0n5fxqwyvy4c1lr0glilcz1nmwqdc9krkqgqh3nlyv23djby9np5"; depends=[]; }; - NMOF = derive2 { name="NMOF"; version="0.36-2"; sha256="0s3zd6wj249b2ppznw84cv4rzsgfl5lzdrmps47hzq3iv83q3d33"; depends=[]; }; + NMI = derive2 { name="NMI"; version="2.0"; sha256="1rxphy9rhy9zhdiz48dvl9m26x6k681lnyn39lqxs0a6jhrxg7y3"; depends=[]; }; + NMOF = derive2 { name="NMOF"; version="0.40-0"; sha256="1zxbhpcl82v0wvp4dfpavwckvfyd2a9f4pbghk4mgqi0vhl8fgpz"; depends=[]; }; NNLM = derive2 { name="NNLM"; version="0.4.1"; sha256="1wi2rbj56v49hsnhwdyyjwfk4hb84sagfq6mpjis4ccq65hxkvfv"; depends=[Rcpp RcppArmadillo RcppProgress]; }; + NNS = derive2 { name="NNS"; version="0.2.6"; sha256="0lynyfj5njvk2smlp9l83fri6308kr6bblckz31wwk3bpy0mlh4c"; depends=[rgl]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; + NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; NORRRM = derive2 { name="NORRRM"; version="1.0.0"; sha256="06bdd5m46c8bbgmr1xkqfw72mm38pafxsvwi9p8y7znzyd0i6ag3"; depends=[ggplot2 SDMTools]; }; NORTARA = derive2 { name="NORTARA"; version="1.0.0"; sha256="1q4dmn5q939d920spmxxw08afacs3pzhr2gzwyqa5kn8xiz4ffg8"; depends=[corpcor Matrix]; }; NPBayesImpute = derive2 { name="NPBayesImpute"; version="0.6"; sha256="09cs6nj1pw4wv4w8bd1c4rilidzx12ymjzah9d0c412bwv0gmdyl"; depends=[Rcpp]; }; - NPC = derive2 { name="NPC"; version="1.0.2"; sha256="1rlxzvq09l2i0w5p5c37g1s3cccjvzpirn14v8dw89acvg3617q1"; depends=[coin dplyr matlab permute]; }; - NPCD = derive2 { name="NPCD"; version="1.0-9"; sha256="0d3fwbq7cnhwnndza4vl25jw6pahvy8zzicgy4pd6r6md7c9rbhm"; depends=[BB R_methodsS3 R_oo]; }; + NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; + NPCD = derive2 { name="NPCD"; version="1.0-10"; sha256="1ag7j1r9j3piisg706hyhq8vaqfqvm1blxpkfxx7r1impjyqzyai"; depends=[BB R_methodsS3 R_oo]; }; NPCirc = derive2 { name="NPCirc"; version="2.0.1"; sha256="1pyckjvf4vzns9hxnhnk7cm4abllmdj3f142pvjhnilyqwndqgyc"; depends=[circular misc3d movMF plotrix rgl shape]; }; NPHMC = derive2 { name="NPHMC"; version="2.2"; sha256="000x9y00gfkaj5lf00a55b9qx15x05yp3g3nmp8slyzsnfv66p5d"; depends=[smcure survival]; }; NPMLEcmprsk = derive2 { name="NPMLEcmprsk"; version="2.1"; sha256="1v15ylgflbdr03pgh55fan1l6mymd1d5n6h9jhbcqahjlcsxkwq3"; depends=[]; }; NPMPM = derive2 { name="NPMPM"; version="1.0"; sha256="14rjj48vfj4wv1na5v181jby016afx4ak1fs0f3g1fif4kbgbdx0"; depends=[]; }; NPMVCP = derive2 { name="NPMVCP"; version="1.1"; sha256="13jpm46abwziq8859jhl6hg1znk3ws1q7g4vlr2jyri3qa6h22dd"; depends=[]; }; NPS = derive2 { name="NPS"; version="1.1"; sha256="02idja149a2sj97sks4lhsaflpifyxi6n0rjlcq9993f84szfgsi"; depends=[]; }; + NPflow = derive2 { name="NPflow"; version="0.10.1"; sha256="0lq3xchw932qjfk0akvxqpy50jnn4gwmyghvb8iabc7scl6px97n"; depends=[ellipse fastcluster ggplot2 gplots pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; NPsimex = derive2 { name="NPsimex"; version="0.2-1"; sha256="1k9i1f5ckvzdns8f5qnm2zq7qs3wsgzsnfwdz21zmhmi6d0pwchm"; depends=[]; }; NSA = derive2 { name="NSA"; version="0.0.32"; sha256="0lnimyx3fpnw9zfhqm7y3ssvbpmvbmhcqy6fp83862imiwpl8i5r"; depends=[aroma_affymetrix aroma_core DNAcopy MASS matrixStats R_methodsS3 R_oo R_utils]; }; - NSM3 = derive2 { name="NSM3"; version="1.3"; sha256="0vmv7r499ig2fq2gwx78jdrflk5i55jy3vgjh87ygwlyhwj9cm8p"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; + NSM3 = derive2 { name="NSM3"; version="1.9"; sha256="0ianzczznigkbialzdm43w9wkgnsx24393v7hnxcvxqczzhl795h"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; - NScluster = derive2 { name="NScluster"; version="1.0.2"; sha256="1bvr44qx3bzbgsdpj70dfq9azkrsywkbvwvm3lwwgpn0spk8apld"; depends=[]; }; + NScluster = derive2 { name="NScluster"; version="1.1.1"; sha256="1w63abh4q0wgv3x7inl2xyp9qgr9m223r2p7nfiqnxk9y259kh04"; depends=[]; }; + NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.2.1"; sha256="0vv2ksmwg7hn6h4p5k32kisnxcpqhc8adlw0559jlmqfq9gqaa3k"; depends=[snowfall]; }; NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.1.21"; sha256="1rbmhk5kags3mm4znakfp1c7axdpv4gmh2h0sydvyc2dm1vds5k4"; depends=[gdata vsn]; }; NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; }; NeatMap = derive2 { name="NeatMap"; version="0.3.6.2"; sha256="186y06zrh87q6vixl2da2d6apvcj1zkk79c95k081zj5awmryr9b"; depends=[ggplot2 rgl]; }; + NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; }; + NestedCategBayesImpute = derive2 { name="NestedCategBayesImpute"; version="1.0.0"; sha256="1az32kqr5bl0mn9d69v21m80w4w3xm3pydwmr2awlfmdq674410i"; depends=[coda dplyr Rcpp]; }; NestedCohort = derive2 { name="NestedCohort"; version="1.1-3"; sha256="10hsc6zik8sz2mp6ig3xr6z3bq0c6rlvqkn11pxny17a4n02wapp"; depends=[MASS survival]; }; NetCluster = derive2 { name="NetCluster"; version="0.2"; sha256="0aby8kfniw07jap795cwk69z83p45q5rap73zp1qbmkm3qcb31g4"; depends=[sna]; }; NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; + NetOrigin = derive2 { name="NetOrigin"; version="1.0-2"; sha256="1ldlx4nmc5k756fmbm9vxn9rwzxmad84zpi6318pjr52izms6q2k"; depends=[colorspace Hmisc igraph]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; + NetRep = derive2 { name="NetRep"; version="1.0.4"; sha256="1a58wxmjhd2jm5n6bl5l2706fbvfvjksfaal65fy04ssw14nziw8"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo ref RhpcBLASctl statmod]; }; NetSim = derive2 { name="NetSim"; version="0.9"; sha256="07h4qwz64k8zj8c2mx23cbnhg4rqrb4nfh20xw98kspz7cisdg6d"; depends=[Rcpp]; }; NetSwan = derive2 { name="NetSwan"; version="0.1"; sha256="1mwdy3ahagiifj2bd1ajrafvnxzi74a1x1d3i2laf1hqpz3fbgld"; depends=[igraph]; }; - NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.4.0"; sha256="1lz8jdn8qrfhdp6sgfzy0bk7csz1v3sjwgbni235x2dz9p60p6n4"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; - Newdistns = derive2 { name="Newdistns"; version="2.0"; sha256="1jgv9jl6pvsjgjsbjvmjg8qwjx4gsmp4kd27pbqxldp0qp0q9mjf"; depends=[AdequacyModel]; }; + NetWeaver = derive2 { name="NetWeaver"; version="0.0.2"; sha256="0wsmz7db8q2fycz6rfbbfs67ccj857y9zs4d80k1gnqazgj5whkn"; depends=[]; }; + NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.0.1"; sha256="09fqlnpdibf9jr5mw2pzmwi66f6cjz8rmm8jay0cv2bami7jhy2a"; depends=[IsingFit IsingSampler qgraph reshape2]; }; + NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.1"; sha256="0lgkj7r2rsf91ig5f1w85vpzy8aa43pk8vjif15ci3any82yz4is"; depends=[dplyr expm ggplot2 Matrix]; }; + NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.0"; sha256="04r0716vlv54cjybxspq61ahb12f2i8krhils5layr436k7slm07"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; + Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; NightDay = derive2 { name="NightDay"; version="1.0.1"; sha256="0vkpr2jwhgghiiiaiglaj1b9pz25fcsl628c9nsp9zyl67982wz1"; depends=[maps]; }; - Nippon = derive2 { name="Nippon"; version="0.6.3"; sha256="1r13n65nzz3fm46q3ddy9gn5vbdym2x1h8cr12ajp40qrmjf41zv"; depends=[maptools sp]; }; + Nippon = derive2 { name="Nippon"; version="0.6.3-1"; sha256="0l7h2fxg87cgkb18b998fb954nfqsgchyikdfz1ysc7kjzpwdacp"; depends=[maptools sp]; }; NlcOptim = derive2 { name="NlcOptim"; version="0.4"; sha256="0842qqn2wdhxzcj5l4ywxrm8qcavrgvkll6ns2d2lbniiczijpnw"; depends=[MASS]; }; - NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.1"; sha256="08w0wkmj9s3sgrwq0icfmp7a1i29hq4594hjmlxqagc843p592r4"; depends=[lavaan]; }; + NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; + NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; + NonCompart = derive2 { name="NonCompart"; version="0.2.6"; sha256="1zvpgdir2wzbg20l4v2fdpf1f3kw78pzx7kg1m8v83738f9jhc3a"; depends=[]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="2.0"; sha256="0i87v666i0fc1c4rwxl6zmal7dp4ph7l7ki5vck9wykm28qr6q5y"; depends=[dr]; }; - NormPsy = derive2 { name="NormPsy"; version="1.0.3"; sha256="0lp6b7hh36ipmsv395xk671f7sczlfz5f9x0h88b2q6zvgbk081v"; depends=[lcmm]; }; + NormPsy = derive2 { name="NormPsy"; version="1.0.4"; sha256="07xx3n9g8ka9k6zqkx1963nqbqi6qlnkxy0fary7l1arv7vjly4s"; depends=[lcmm]; }; NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; }; NormalLaplace = derive2 { name="NormalLaplace"; version="0.2-0"; sha256="11z568zhb7jw9ghp6wlyf26ijm25crc5pqhzw71qgvva42nsmmwn"; depends=[DistributionUtils GeneralizedHyperbolic]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; - OAIHarvester = derive2 { name="OAIHarvester"; version="0.2-0"; sha256="1zpnf56kji14lrz6jm7saiw55yg7n62dk3r5qb21wx9qwzjggycp"; depends=[curl XML]; }; + OAIHarvester = derive2 { name="OAIHarvester"; version="0.2-2"; sha256="0r3yz8x123f0p9d165074ylnmf3hkyyc4h1758018m9iqj5cqp2h"; depends=[curl XML]; }; OBsMD = derive2 { name="OBsMD"; version="0.1-0.4"; sha256="00hakq94lkkx9iscxm3sv4hslyqsnjcxs74l6v89bm8p5ds8dlzl"; depends=[]; }; + OCA = derive2 { name="OCA"; version="0.1"; sha256="0kaf46gic8gp8f98y68kqvgm1baicwgvarfiwry1j0bd2rjad64d"; depends=[]; }; ODB = derive2 { name="ODB"; version="1.1.1"; sha256="1hha4rkbc2zh3karkqa0vn4v0nmcd7sljcymy1nh28bx1gx2ffgs"; depends=[DBI RJDBC]; }; - ODMconverter = derive2 { name="ODMconverter"; version="2.1"; sha256="03m15vck01s6jqcpm5fl7mipki4grgywlb9mksr0l8wygmn8zkxs"; depends=[xlsx XML]; }; - OData = derive2 { name="OData"; version="0.3"; sha256="0wd9z8k27vxblh1v95p3bx15i15yacqqfpwr15bnd0xnaw9sr0z7"; depends=[RJSONIO XML]; }; + ODMconverter = derive2 { name="ODMconverter"; version="2.3"; sha256="07j9p2hfx3almd5n3j0clc1alj5wzrnzljd9w13bbd6nrvil1krm"; depends=[xlsx XML]; }; + OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; }; OECD = derive2 { name="OECD"; version="0.2.2"; sha256="07flhhca7734fffcqvxjl1hlhbbhn6lch868rlpps0r99jxy8m5q"; depends=[httr rsdmx xml2]; }; OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; OIsurv = derive2 { name="OIsurv"; version="0.2"; sha256="148mpjj5navc1vrl72y87krn4lf3awnd32z3g4qqaia404w5w7p7"; depends=[KMsurv survival]; }; OLScurve = derive2 { name="OLScurve"; version="0.2.0"; sha256="1zqapfwgwy9rxnbhmlgplkphw1bdia4cyi9q6iwcppw3rjw75f1n"; depends=[lattice]; }; ONETr = derive2 { name="ONETr"; version="1.0.3"; sha256="14l56qcmyyk2ivcfkfv7j2k4i1mfrngpi9zcc88w6xfhz5qlb548"; depends=[plyr RCurl XML]; }; + OOR = derive2 { name="OOR"; version="0.1.1"; sha256="09c7c2inpnag3kckrg9lfzxd3giqkj9xm91ibjkgpfv68nf733qc"; depends=[]; }; OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; }; OPDOE = derive2 { name="OPDOE"; version="1.0-9"; sha256="0pf8rv5wydc8pl4x57g7bk2swjabaxdgijgsigjy5wihfcb48654"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; - OPI = derive2 { name="OPI"; version="2.3"; sha256="04g54iv43psfc8j5bz0rpks9mppx5fff683cxh36bsmbsl6rd1m9"; depends=[]; }; + OPI = derive2 { name="OPI"; version="2.5"; sha256="1rdm0zn62i2m9hbnhy1jbj2l0n3a8qckf8iv5hpfkj7xq6zzams7"; depends=[]; }; ORCI = derive2 { name="ORCI"; version="1.1"; sha256="0xy5lvz2scz06fphjyhqbdhp4bizmv87a8xykp9dbgx8b4ssnqgz"; depends=[BiasedUrn BlakerCI PropCIs]; }; ORCME = derive2 { name="ORCME"; version="2.0.2"; sha256="1pm8ajj24qqj2fir0gjzq5f4mfpl1cnj6fm2z5qg6g3sbnm57ayk"; depends=[Iso]; }; ORDER2PARENT = derive2 { name="ORDER2PARENT"; version="1.0"; sha256="04c80vk6z227w6qsnfls89ig4vqyiiymdarhq1pxa0gpr8j2ssx5"; depends=[Matrix]; }; ORIClust = derive2 { name="ORIClust"; version="1.0-1"; sha256="1biddddyls2zsg71w4innxl0ckfb80q2j9pmd56wvbc0qnbm0w3q"; depends=[]; }; ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; }; + OSMscale = derive2 { name="OSMscale"; version="0.4.1"; sha256="175m15mas5kpqq93czlgiimkxvl4mg40dw04il1jnk4gypj4ifjq"; depends=[berryFunctions OpenStreetMap sp]; }; OTE = derive2 { name="OTE"; version="1.0"; sha256="18w483syhs523yfib9sibzmj16bypqxk4sc4771kfr1958h3igai"; depends=[randomForest]; }; OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; OTUtable = derive2 { name="OTUtable"; version="1.0.0"; sha256="0wdzi1ii5hwvr2fby26ydc4jhwl0gyi24jnl4yib6621hnjgv10y"; depends=[]; }; - OUwie = derive2 { name="OUwie"; version="1.49"; sha256="1hmbyqr0b9n6ng87adij59jyjkzwf8lw6lfxjqqzpz9mh9k1fkvy"; depends=[ape corHMM corpcor expm lattice nloptr numDeriv phangorn phytools Rmpfr]; }; + OUwie = derive2 { name="OUwie"; version="1.50"; sha256="1gzgwax9kmcr6rl6nv10xn536nbkjhmg6sqax58xxinc00ykdx75"; depends=[ape corHMM corpcor expm lattice nloptr numDeriv paleotree phangorn phytools Rmpfr]; }; Oarray = derive2 { name="Oarray"; version="1.4-5"; sha256="1w66vqxvqyrp2h6acnbg3xy7cp6j2dgvzmqqk564kvivbn40vyy4"; depends=[]; }; - OasisR = derive2 { name="OasisR"; version="1.0.0"; sha256="0anw1ncbjjmlnhigcfwm9zqmp4ah5cfbmmm3588k95xxp6xq9vmv"; depends=[rgdal rgeos spdep]; }; - OceanView = derive2 { name="OceanView"; version="1.0.4"; sha256="072gjbka7ncp5sa463kbi06fjx7nm1ljgzpx4b7ybq9pcwvnyzz6"; depends=[plot3D rgl shape]; }; + OasisR = derive2 { name="OasisR"; version="2.0.1"; sha256="0knkq33yf0b5flbkmc5ng4ys4x840rzkfrr26jcp7ri3bqg87lqv"; depends=[birk rgdal rgeos spdep]; }; + OceanView = derive2 { name="OceanView"; version="1.0.4"; sha256="072gjbka7ncp5sa463kbi06fjx7nm1ljgzpx4b7ybq9pcwvnyzz6"; depends=[plot3D plot3Drgl rgl shape]; }; Ohmage = derive2 { name="Ohmage"; version="2.11-4"; sha256="14pga59ikiywyl6xnfd2d8sy323vyn88q9sf101bcwp0s0qczwzg"; depends=[RCurl RJSONIO]; }; - OjaNP = derive2 { name="OjaNP"; version="0.9-8"; sha256="010l75irgj7nl8yq6crp8d00zjgpv9wg2maw99cj0frhqxvqzbfz"; depends=[ICS ICSNP]; }; + OjaNP = derive2 { name="OjaNP"; version="0.9-9"; sha256="12a7zfrk3rdvfby5qa511w3nk5jpnsd5gg2z46b5s97rxb3qq7za"; depends=[ICS ICSNP Rcpp]; }; OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; - OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="0.1.4"; sha256="1g3yrrnrk4375wxzfdndsm963ma112k5njv18adh43vfzyzg5l2m"; depends=[Rcpp]; }; + OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="0.1.6"; sha256="0whd5vwaqhvv5qmryzh7nh5skc4lv740ziha7vxfpb91ph0mgrz8"; depends=[Rcpp]; }; + OneR = derive2 { name="OneR"; version="2.1"; sha256="1f9gr9bdwnlxlr0mv10f05pk9fznlgkdy0j5gcyfc1643826chfr"; depends=[]; }; OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.2.0"; sha256="1ckagq14w9923a4x7pk9mfzqcfayi00apwd2kvqzgd0s6355r1q7"; depends=[digest ggplot2 httpRequest plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; OpenCL = derive2 { name="OpenCL"; version="0.1-3"; sha256="0f7vis0jcp0nh808xbzc73vj7kdcjb0qqzzsh3gvgamzbjfslch8"; depends=[]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.0.4"; sha256="1bzfbfckc7yaflsd74c5zs2ig4rkd3q9fzxxrw4kc0vgijalyf3p"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; }; + OpenML = derive2 { name="OpenML"; version="1.2"; sha256="16zvxr45jcw4z30jmg9l6xdlkq76wbi89xj8c328qkwlghik17sy"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise mlr ParamHelpers stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.1-2"; sha256="1cpsbjmqql0fsjc1xv323pfkhfr9vrcv5g4j3p1qc5zn4z9pq7r6"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.5.2"; sha256="1ymh4im1d0ad6zjz4crrljvnb2g7aqisb2xqrxlsqljlbjbizmfv"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.7.4"; sha256="18zgypwjd37fcmsc3gzsa3ww6b7l9y9sm7jgj5x79hzqn0mfknfv"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.9"; sha256="1s40c2yfd4a4khs0ghlbzii94x8cidg851bivanplg2s51j5jrhk"; depends=[abind colorspace GPArotation plyr psych pvclust rgl stringr XML]; }; - OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.2"; sha256="1cszyp4bvlypri9smd238r2bd05dwpcrsi6bs8yl5g2glfnv1zjn"; depends=[ggplot2 raster rgdal rJava sp]; }; + OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.3"; sha256="099vdyq0vw9xl5v7zggdb8yd4zl7x8imvvbj5j2f5hrspgg131pz"; depends=[ggplot2 raster rgdal rJava sp]; }; OptGS = derive2 { name="OptGS"; version="1.1.1"; sha256="1acwwjng5ri5vganv7b5pagp7524ifr0q8h1pbfb5g6z3x6w08kh"; depends=[]; }; OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; }; OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; }; - OptiQuantR = derive2 { name="OptiQuantR"; version="0.0.1"; sha256="1wgvz4n0qla4i5c24j0yanl7xz4f56951q8zb1593rf5kba1gg1k"; depends=[data_table lubridate]; }; + OptimaRegion = derive2 { name="OptimaRegion"; version="0.2"; sha256="0xhl7jp2429007jzx305ggfwyx0vh2vxw7l2a7f3c0prklhyqpqc"; depends=[boot DepthProc fields nloptr rsm spam]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-3"; sha256="1vrbx62080r9sgk9ipjvdrqvikp4gwidp5gi5j92hspk7cp10amg"; depends=[]; }; + OptimalDesign = derive2 { name="OptimalDesign"; version="0.2"; sha256="1gpcasdbcgqqr1l6f63q4jqva28rpz0cbgs1f4l3bizldd9kf4kh"; depends=[]; }; OptionPricing = derive2 { name="OptionPricing"; version="0.1"; sha256="0j98h3fn29xfv7xyp7av459v56chw99pnvmsbqvrv4g77p60f5q2"; depends=[]; }; OrdFacReg = derive2 { name="OrdFacReg"; version="1.0.6"; sha256="16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv"; depends=[eha MASS survival]; }; OrdLogReg = derive2 { name="OrdLogReg"; version="1.1"; sha256="18s75pmz1g3yac2rfl41kj8sfflq298qkijnvqlybgxpq98ickxx"; depends=[LogicReg]; }; OrdMonReg = derive2 { name="OrdMonReg"; version="1.0.3"; sha256="1xca8pvvq79j484l2rmn4nva8ncx8z51g5diljikck231y8qjqaz"; depends=[]; }; OrdNor = derive2 { name="OrdNor"; version="2.0"; sha256="1zr8zzigrbf6r0zz4f0za6my6d67wxqzvmabl36pjxc3sq7jh83j"; depends=[corpcor GenOrd Matrix mvtnorm]; }; OrdinalLogisticBiplot = derive2 { name="OrdinalLogisticBiplot"; version="0.4"; sha256="1axn03yrw30r2j9ss5ig9sq857y37vhrr4a7px68jc2az8mng41j"; depends=[MASS mirt NominalLogisticBiplot]; }; - OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.4-4"; sha256="046lr0piiy5w5lxjvyw7iqqclkghmc6zqymfypkw374gk73yrm76"; depends=[]; }; + OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.4-6"; sha256="1xihaq8vxc9s6b37bydavg3xxnzbn96l85b1bz2mq5m6snpp8ra0"; depends=[]; }; OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; }; - OrthoPanels = derive2 { name="OrthoPanels"; version="0.9-1"; sha256="1p8q0b9zm7dd84qh3mrz67lcd1r11z5rj0bp93nsl23q1m2998sc"; depends=[MASS]; }; + OrthoPanels = derive2 { name="OrthoPanels"; version="1.1-0"; sha256="1g78abh9i3x0g34vjqz2ic9330rbgn8k0hgdcrznxgsfnlgnpx9x"; depends=[MASS]; }; OutbreakTools = derive2 { name="OutbreakTools"; version="0.1-14"; sha256="03bdb7w5nsrjxz5kd5zvgwybgmv2mzsxyzdc7v3kpwi20yfb9ax8"; depends=[ape ggmap ggplot2 knitr network networkDynamic plyr RColorBrewer RCurl reshape2 rjson scales sna]; }; OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; }; OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; }; OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; - OxyBS = derive2 { name="OxyBS"; version="1.0"; sha256="1h8jxiya6lz9ib53dm5wmhqg2y20p41mk6dqjx6k8zgjglqk8p9w"; depends=[]; }; + OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; P2C2M = derive2 { name="P2C2M"; version="0.7.6"; sha256="07ycl22v03b2xdaw4v0l6layqhab431ma38qywzm96hkl3ywvl49"; depends=[ape ggplot2 rPython stringr]; }; - PACVB = derive2 { name="PACVB"; version="1.1"; sha256="1qkh9a904xd46295jxqyj1ka993ibd0hbm026hjs2ji9pw894040"; depends=[BH MASS Rcpp RcppArmadillo]; }; - PAFit = derive2 { name="PAFit"; version="0.7.5"; sha256="1rczpgy1qrzc1p02nssx5gyi8m71w5jl97scqaddqyzg1c0zfvrp"; depends=[Rcpp]; }; + PAC = derive2 { name="PAC"; version="1.0.6"; sha256="04jbyxgw8cpbjajlnal66y1kfjnxd4v6gp32wg7cdp7cmz0yxbii"; depends=[dplyr igraph parmigene Rcpp]; }; + PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; }; + PAFit = derive2 { name="PAFit"; version="0.9.6"; sha256="0jallwvzrjw4vv1gnszlhx6jv8g67wx41kgcil0yz8867wf1sxkb"; depends=[RColorBrewer Rcpp VGAM]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; }; - PANICr = derive2 { name="PANICr"; version="0.0.0.5"; sha256="049ga5iiymqczvy51y52yk7yvv9xy0ibr64ly8ciqig84d5f4jjr"; depends=[MCMCpack]; }; + PANICr = derive2 { name="PANICr"; version="1.0.0"; sha256="167s1p7y8mmhcdnng0s5i09kjfh088jhmxs74rkyda52l9hyx363"; depends=[coda MCMCpack xts]; }; + PARSE = derive2 { name="PARSE"; version="0.1.0"; sha256="0y408va1rfn3j8cb1i0k8kypyg9mb6yfj513l54f23z31d3bi45m"; depends=[doParallel foreach gplots mvtnorm]; }; PAS = derive2 { name="PAS"; version="1.2"; sha256="0q5g9j8xb9fl7r8f1w5gk5h83ll5w1r6m2gq9ilw8w8s96pm4xd8"; depends=[glmnet]; }; PASWR = derive2 { name="PASWR"; version="1.1"; sha256="1rxymnqvflypc6m62f5vw65l8x1m2yah7r11hhpmzdq2l2sg8fci"; depends=[e1071 lattice MASS]; }; PASWR2 = derive2 { name="PASWR2"; version="1.0.2"; sha256="04vwgmi56spjriwp2ls5zcgslfg1y4pvwa0m33f9izay0y6q2wfx"; depends=[e1071 ggplot2 lattice]; }; + PASenseWear = derive2 { name="PASenseWear"; version="1.0"; sha256="0x84j1vdds4g08birmjxb0c2g1ahwv83bk11532jkmg32dnhmj58"; depends=[ggplot2]; }; + PATHChange = derive2 { name="PATHChange"; version="1.0"; sha256="1pmxhaych01cywx9bb5z0p5lbxcma7x6nlprivpx3gnpg7m9srpg"; depends=[rlist stringr VennDiagram]; }; PAWL = derive2 { name="PAWL"; version="0.5"; sha256="1sx4g4qycba2j1fm0bvhz3hk6ghhdc37rz5zi1njqxrpmbnkqg04"; depends=[foreach ggplot2 mvtnorm reshape]; }; - PAactivPAL = derive2 { name="PAactivPAL"; version="1.0"; sha256="10whjaqfz50llv9ij4l4vadkxba038l31vpp27wgjli9kvl39a2k"; depends=[]; }; + PAactivPAL = derive2 { name="PAactivPAL"; version="2.0"; sha256="1mjfxq0a9fql8bg5c6l5w1knjqq29cb4l10ppxnym9gnsjrk0kw1"; depends=[]; }; PBD = derive2 { name="PBD"; version="1.2"; sha256="0pxm9pdmylg95v5pyppvyl64zx5vgypx5fksj18zvws6vpb60xab"; depends=[ade4 ape DDD deSolve phytools]; }; + PBIBD = derive2 { name="PBIBD"; version="1.2"; sha256="1dbrd6qwczwk41zmh9ck9cgzqpry9kycygyk0ls8kc92p45cz3dh"; depends=[]; }; PBImisc = derive2 { name="PBImisc"; version="1.0"; sha256="18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl"; depends=[lme4 Matrix]; }; + PBNPA = derive2 { name="PBNPA"; version="0.0.1"; sha256="1a43kk7di5bqifa68lhrxx3p9vvfn0rr5nifx60c2y7j7cp63fk8"; depends=[metaRNASeq]; }; PBSadmb = derive2 { name="PBSadmb"; version="0.68.104"; sha256="01akimdsp0bkvz3a5d75yyy3ph0mff85n8qsnr59fla5b5cm4qlj"; depends=[PBSmodelling]; }; - PBSddesolve = derive2 { name="PBSddesolve"; version="1.11.29"; sha256="13vprr66hh5d19xambpyw7k7fvqxb8mj5s9ba19ls7xgypw22cmm"; depends=[]; }; + PBSddesolve = derive2 { name="PBSddesolve"; version="1.12.2"; sha256="12pl95mcak88524s8zvk9dzib2g40fwaz6iz7igx9wg6vib9d1sj"; depends=[]; }; PBSmapping = derive2 { name="PBSmapping"; version="2.69.76"; sha256="1fci7mx5m3jqy92nqfaw5w5yd5rw6f0bk5kya1v0mmvf7j715kar"; depends=[]; }; PBSmodelling = derive2 { name="PBSmodelling"; version="2.67.266"; sha256="0ych9k20x0m71gkdrpwv5jnx6pfsk45wwsaaamy32cmnhd3y14sq"; depends=[XML]; }; PCA4TS = derive2 { name="PCA4TS"; version="0.1"; sha256="1qi9nlaf5181afrdvddh10a9vxyhry102n3dhai86im8yz4if9y6"; depends=[tseries]; }; PCAmixdata = derive2 { name="PCAmixdata"; version="2.2"; sha256="0gbmiy2mhz8lgp0pcjby4ny8a28wlx1xrsa2lknzxn4d0m2csxjn"; depends=[]; }; PCDSpline = derive2 { name="PCDSpline"; version="1.0"; sha256="15kmvcwvwlsr1107n7mfajvf9b1kcslnhsdx0drjjhsvq193qrqa"; depends=[matrixcalc nleqslv]; }; - PCGSE = derive2 { name="PCGSE"; version="0.2"; sha256="19bpnn1b8ihmf52zh9g9pc38130np1ki8l7wf0j5myw2cnw6fna8"; depends=[MASS RMTstat safe]; }; + PCGSE = derive2 { name="PCGSE"; version="0.3"; sha256="1fb4in6b8d5n0zjfys33y35n3srqpzrnyk2qhzvpjsjf7jmn9898"; depends=[MASS RMTstat safe]; }; PCICt = derive2 { name="PCICt"; version="0.5-4"; sha256="1g17hxs00dlnb6p0av6l7j99qy00555f80nk1i1i1x87fszp3axa"; depends=[]; }; PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; - PCPS = derive2 { name="PCPS"; version="1.0.2"; sha256="17gjj88zq123nxg4dh2w304sh9c1c4myad2g8x31wn1z7bmawv3y"; depends=[ape phylobase picante plotrix SYNCSA vegan]; }; + PCPS = derive2 { name="PCPS"; version="1.0.3"; sha256="1ys3xp1nripy5zkq25byak9k6yf5rdbfnww8j13yc469428ip8q0"; depends=[ape phylobase picante SYNCSA vegan]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; + PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; PCovR = derive2 { name="PCovR"; version="2.6"; sha256="0b1bbf6namll2afxh61qz4xz4ipzipdnfhbcqlragmyj9pisaf45"; depends=[GPArotation MASS Matrix ThreeWay]; }; - PDQutils = derive2 { name="PDQutils"; version="0.1.4"; sha256="1wag65qgfbwr506c9jnwbd4drkqapy41sswy9g1j94qm1iwgwcvz"; depends=[moments orthopolynom]; }; + PDM = derive2 { name="PDM"; version="0.1"; sha256="1pbdy13ji9c6krgh2r1qgrzmf4hdmrdzylsr71n3hh5jq4n9xg8x"; depends=[jpeg]; }; + PDQutils = derive2 { name="PDQutils"; version="0.1.5"; sha256="1k9zfdsxyn384ymq920y0p0fps6svlq08sp13ayg0mindsswmp3k"; depends=[moments orthopolynom]; }; PDSCE = derive2 { name="PDSCE"; version="1.2"; sha256="17lc6d8ly6jbvjijpzg45dvqrzrh5s1sp415nycazgpbg9ypwr2h"; depends=[]; }; + PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; }; PEIP = derive2 { name="PEIP"; version="2.0-1"; sha256="0zfvp3ngc4320sh6r6y746zxigr2wqgaqasnlkv3hxhzpzxq08lj"; depends=[bvls Matrix pracma RSEIS]; }; PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; PET = derive2 { name="PET"; version="0.4.9"; sha256="1ijg6mfh3xrc1gjh6a4nq64psk9yh16yc8nfp7c9837xbjigqq7f"; depends=[adimpro]; }; - PGEE = derive2 { name="PGEE"; version="1.0"; sha256="10js28w629y145q9zcc42ydw03ll2dh7pfzdqx2mmli300w88mvr"; depends=[MASS mvtnorm]; }; + PGEE = derive2 { name="PGEE"; version="1.4"; sha256="1hzqx1a3zgg07dqw7yyykvlaxjqpr04ch48bmnl4byy6izfghy8m"; depends=[MASS mvtnorm]; }; PGICA = derive2 { name="PGICA"; version="1.0"; sha256="0qxa5hw2s3mndjvk8lb82pcbyj1kbdclx4j4xa8jq0lcj180abi9"; depends=[fastICA]; }; - PGM2 = derive2 { name="PGM2"; version="1.0"; sha256="18azh6k271p9dvc23q402pv7wrilr1yk02vqqy6qjppnvq6jxahg"; depends=[]; }; - PGRdup = derive2 { name="PGRdup"; version="0.2.2.1"; sha256="02xl20kiy0704pw3n72pk8bi1vxr30fz6n703p5j3f0f9n954sl6"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; - PHENIX = derive2 { name="PHENIX"; version="1.2.2"; sha256="09x8x8izv4faal772zrz0n867wzp3s6gmmqpr7lln7ww07vlh4gx"; depends=[ppcor SuppDists]; }; + PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; + PGRdup = derive2 { name="PGRdup"; version="0.2.3"; sha256="10nm71kj746ap7qx1qr7y8xm3m732blkaac20lwif2zljl3cy2dl"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; + PHENIX = derive2 { name="PHENIX"; version="1.3"; sha256="1b9sxy2slfzls2snif738sjw34k3hs2i55g1yb1kbx06702q47ak"; depends=[ppcor SuppDists]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.8"; sha256="17lmjfbwf8j68zzzhdvppyjacdsmy4zmcfj0pcjsw5j6m361hvh6"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.3"; sha256="1zq4ks6w5vrhy1f170fv16zgrgi1lfxmkpfkg75sjin7asw4i7a9"; depends=[survival]; }; PIGE = derive2 { name="PIGE"; version="0.9"; sha256="1x8ml25mm69dvlszm9p2ycph92nxcsgd52ydj7ha0dwrrpcv2law"; depends=[ARTP snowfall survival xtable]; }; @@ -1637,455 +2038,543 @@ in with self; { PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-3"; sha256="07qxyszj0f7qwrg5ixvciy33mjsfxxi9rk32a1fz46z8wiwfil9i"; depends=[]; }; PKI = derive2 { name="PKI"; version="0.1-3"; sha256="1xhc84k4iszvfawwwzrwclfs41nvb8bmyygapxmsxjky725s7k1g"; depends=[base64enc]; }; - PKNCA = derive2 { name="PKNCA"; version="0.6"; sha256="0k04xb0akkk3d4m66v66wisxk38mn13avxk6zlm30fivwqh8vzw9"; depends=[digest doBy lattice nlme plyr]; }; + PKNCA = derive2 { name="PKNCA"; version="0.7.1"; sha256="170chkdh78xmcw2p1xm23x4q5kj0637i0nbrwz73cxg0yni4h3qa"; depends=[digest doBy lattice nlme plyr tidyr]; }; PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; }; PKgraph = derive2 { name="PKgraph"; version="1.7"; sha256="0g36cdv5cblqx69j48irxjc5nlw2cl3p714mlsblnd3362z1brwn"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 lattice proto rggobi RGtk2]; }; PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; }; PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; }; + PLMIX = derive2 { name="PLMIX"; version="1.0"; sha256="1z59z7ynlfh7cskanj7drvry0fpzl5mq52as8adi2zxp2q8q032p"; depends=[abind combinat foreach FSA rcdd Rcpp]; }; PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; }; PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; }; PLordprob = derive2 { name="PLordprob"; version="1.0"; sha256="156lvz6vfm68hm32l5nlhq15hfacdla627d6lf8l4g34lwzdh8k8"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.0.9"; sha256="11qwgw4sgzl3xhrm468bsza83h3mfn89157nfwnrassl7qr42xkq"; depends=[impute plyr]; }; PMCMR = derive2 { name="PMCMR"; version="4.1"; sha256="0mfms8wvdwcakkgsnrb2wawp07hvlr7s6cvl54kxv7f5fqllw5kc"; depends=[]; }; + POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; + POT = derive2 { name="POT"; version="1.1-6"; sha256="08av53rnishk3mhwrb6ydbgc3n9nwi87jlx5vmag3vpiidhn1laj"; depends=[]; }; PP = derive2 { name="PP"; version="0.5.3"; sha256="17y1v2536n7ap0kvllwkmndmdjf4wgwl171c053ph45krv37mscf"; depends=[Rcpp]; }; PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; }; - PPtreeViz = derive2 { name="PPtreeViz"; version="1.3.0"; sha256="1v5538mwmdfgwyqi6a72b4hkhwl0b8xz3ai81cv4q8cbvgwgq8fj"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo]; }; + PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.1"; sha256="02073yxdwns9mnnjvw13ydw1s3vrxl53szcd9jy8ibj78vnm57r3"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; PRIMsrc = derive2 { name="PRIMsrc"; version="0.6.3"; sha256="18vk968dz9508bnnyhq2wz7py72ld42c0ah22a7d8n3nwx26ldbd"; depends=[glmnet Hmisc MASS survival]; }; PRISMA = derive2 { name="PRISMA"; version="0.2-5"; sha256="06z4z1rbsk5a8kpbs6ymm0m02i8dwbmv783c3l2pn4q3pf6ncmd5"; depends=[ggplot2 gplots Matrix]; }; + PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.0.1"; sha256="1qk9cljk52m8rcasck8cl7gwzhcsx0p58jn31izy2j027w0rns7j"; depends=[DiagrammeR]; }; PROFANCY = derive2 { name="PROFANCY"; version="1.0"; sha256="11a0fpsv1hy0djv36x2i2hv2j50ryy0x7g7nn7vv76m1sl6q6r4b"; depends=[igraph lattice Matrix]; }; PROTOLIDAR = derive2 { name="PROTOLIDAR"; version="0.1"; sha256="0bz3071b0wlcvh40vl3dyiiixk5avsj6kjjnvlvx264i5g08rij4"; depends=[]; }; PRROC = derive2 { name="PRROC"; version="1.1"; sha256="1v35z9inzb6x42fil8z7kfcrnfif93cj8974mfbqhhx0f9vi476a"; depends=[]; }; - PReMiuM = derive2 { name="PReMiuM"; version="3.1.3"; sha256="0xlkk5r02kq6q8mgymbw6qmb6wdvxskx6jzyciv26wyd3rgis3al"; depends=[BH cluster gamlss_dist ggplot2 plotrix Rcpp RcppEigen]; }; + PReMiuM = derive2 { name="PReMiuM"; version="3.1.4"; sha256="0x13bada1spf4wk8bwy9rdpjcfzd4s7ypfx88slpmg87gw4qc7s2"; depends=[ald BH cluster gamlss_dist ggplot2 plotrix Rcpp RcppEigen]; }; + PResiduals = derive2 { name="PResiduals"; version="0.2-4"; sha256="1a4sbdz0p8mqhcvpd1zkkinihvkqj1jw8m510k1yifmb4aav7xiw"; depends=[Formula MASS rms SparseM]; }; PSAboot = derive2 { name="PSAboot"; version="1.1.4"; sha256="1zfqpq0ibgazwppbxbmqvkvh9j5421xmj9132zghxki0xdy655ss"; depends=[ggplot2 ggthemes Matching MatchIt modeltools party PSAgraphics psych reshape2 rpart TriMatch]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; - PSCBS = derive2 { name="PSCBS"; version="0.61.0"; sha256="04msj4rnrbdcjbm5aqbzm2sirb8q4wkag2fgsbdrca61v0lfg5q4"; depends=[DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; + PSCBS = derive2 { name="PSCBS"; version="0.62.0"; sha256="15r3rpqd4fpnssbbpkw0vxmgl3akid5r8n20nvr50bfzrl0w8j7f"; depends=[DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; + PSF = derive2 { name="PSF"; version="0.3"; sha256="0x2w0prcnyy82zvr0g2h18rc67r8wzvax3h9psk9dd4il8s4xfpw"; depends=[cluster data_table forecast knitr]; }; PSM = derive2 { name="PSM"; version="0.8-10"; sha256="1s60fr85xn3ynpvsbc3nw7vgz6h6jxy3yii1w6jpkw3iwl4bgn84"; depends=[deSolve MASS numDeriv ucminf]; }; - PST = derive2 { name="PST"; version="0.86"; sha256="0m6v7j36v47zdqqd3lf05w6pk0f3wfs1kix1qfvy2gj8n41jjmxf"; depends=[RColorBrewer TraMineR]; }; + PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; PTAk = derive2 { name="PTAk"; version="1.2-12"; sha256="1phxh2qbzsj2ia2dr6z30lhi765lk1m8lbk57sdgvm14fmi9v5nk"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.0"; sha256="10if2hh69yysi2y82m7is74hmzw2xpxijgb8bhy1d4g9n9lqidfs"; depends=[doParallel]; }; + PTXQC = derive2 { name="PTXQC"; version="0.82.2"; sha256="1slx4c2s3agrpfxhr4fs2gy9mhiqvnhsqs06m2wkan909fkjdw1z"; depends=[data_table ggdendro ggplot2 gridExtra gtable plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; }; PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; - PVR = derive2 { name="PVR"; version="0.2.1"; sha256="1p87pj9g0qlc8ja6xdj2amny9pbkaqb34x2y9nkl1nj1pkwjq2s5"; depends=[ape splancs]; }; PWD = derive2 { name="PWD"; version="1.0"; sha256="0ksr3biaqd4p5a4lv28i4cwk1fn9822ndq2161mgvc1c344p06fj"; depends=[Rcpp RcppArmadillo]; }; + PWEALL = derive2 { name="PWEALL"; version="1.0.0"; sha256="1m2wg0fzmlf9xbynr7mw6izkjp3r32fm4l6njrfkcr9gqfz2dab8"; depends=[survival]; }; PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; }; Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; }; PairViz = derive2 { name="PairViz"; version="1.2.1"; sha256="0mjp5p6n5azbhrm2hvb9xyqjfhd49pw9ia8k70749yc96ws1qqc7"; depends=[graph gtools TSP]; }; PairedData = derive2 { name="PairedData"; version="1.0.1"; sha256="025h5wjsh9c78bg6gmg6p6kvv2s6d5x7fzn3mp42mlybq0ry78p0"; depends=[ggplot2 gld lattice MASS mvtnorm]; }; + PanJen = derive2 { name="PanJen"; version="0.1"; sha256="09jl3ny4wcz7kd9kvqp5rscl8amxhpibzhny9lnakck3jrwa20hr"; depends=[Formula lasso2 mgcv RColorBrewer]; }; PanelCount = derive2 { name="PanelCount"; version="1.0.9"; sha256="1b6c83qypjc3ylvhh24xm4pjk8w34s24v0i9ddlmg92f1518hlkj"; depends=[Rcpp RcppArmadillo statmod]; }; Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; ParallelForest = derive2 { name="ParallelForest"; version="1.1.0"; sha256="1xa9lfgrvzv7bvv1aaabcfk4372p8x5gxgj463h5ggf9x177lj5j"; depends=[]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; - ParamHelpers = derive2 { name="ParamHelpers"; version="1.7"; sha256="0ddb50c8xvs85422ig8chrrn0vaz9dsqn95409i1qdfg9rf916fr"; depends=[BBmisc checkmate]; }; + ParallelTree = derive2 { name="ParallelTree"; version="0.1.2"; sha256="0x99x1iycx8ik8cih972awnxifvmhbrmjrf2csmnn9fw4rsqn0p5"; depends=[ggplot2]; }; + ParamHelpers = derive2 { name="ParamHelpers"; version="1.10"; sha256="0nzsl3hby4dhnp7rw47zjmdrrfsgp5w1ai9fpw3bgc4k5sk9nql0"; depends=[BBmisc checkmate]; }; ParentOffspring = derive2 { name="ParentOffspring"; version="1.0"; sha256="117g8h0k65f2cjffigl8n4x37y41rr2kz33qn2awyi876nd3mh93"; depends=[]; }; ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; }; + Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="1.0"; sha256="1wwfq0zwf2b2wlq4pwhw92d02f715l7bkc0si7gndk0mp2pibcrx"; depends=[]; }; Pasha = derive2 { name="Pasha"; version="0.99.21"; sha256="0z77n5wplapdfcqxbak7mg58a9nnnwwqcznah5lswlwa0prz18jc"; depends=[Biostrings bitops GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; - PatternClass = derive2 { name="PatternClass"; version="1.5"; sha256="1paw39xm2rqjnc7pnbya7gyl160kzl56nys9g0y1sa6cqycy3y5x"; depends=[SDMTools]; }; + PathSelectMP = derive2 { name="PathSelectMP"; version="1.0"; sha256="19gkd7il4whxp1mm4pinlrl8yj09b5sknz8c4g75n2hhh96libns"; depends=[mice MplusAutomation]; }; + PatternClass = derive2 { name="PatternClass"; version="1.7.1"; sha256="11r4p4s2pm0c4fmnpijzz5srhpai444mbx5nszhkssfsp9rh7cm9"; depends=[SDMTools]; }; + PdPDB = derive2 { name="PdPDB"; version="1.0"; sha256="1rnphdklyzznpzf57gwlnr498612d54kl5jkqnza6h8if7nqr4kd"; depends=[plyr]; }; + Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; Peaks = derive2 { name="Peaks"; version="0.2"; sha256="0a173p5cdm1jnm7bwsvjpxh4dccy593g02c4qjwky1cgzy5rvin2"; depends=[]; }; - PearsonDS = derive2 { name="PearsonDS"; version="0.97"; sha256="0bsdj4zir12zkv8yhq1z6dqjzhkb9l0f88jrr4iyclns1pcqvrvi"; depends=[]; }; + PearsonDS = derive2 { name="PearsonDS"; version="0.98"; sha256="11y44j7js67k4kgg2rdc3y23ckaih63fvm5li7z6p6d8anlx1fcv"; depends=[]; }; PearsonICA = derive2 { name="PearsonICA"; version="1.2-4"; sha256="0jkbqha1nb9pf72ffki47wymsdmd50smkdhvpzvanv4y2rmqfhvg"; depends=[]; }; PedCNV = derive2 { name="PedCNV"; version="0.1"; sha256="09qxcjzwdgzdkbj28rzmfv7k3q2qsiapnvx3m45a835r57h5gynp"; depends=[ggplot2 Rcpp RcppArmadillo]; }; - PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.0"; sha256="1jcwk4vr73brkg4syrbybkfdhbrzs2y9qxd7286h27i67xn1s199"; depends=[Matrix Rcpp RcppArmadillo survival]; }; + PeerPerformance = derive2 { name="PeerPerformance"; version="2.1.2"; sha256="07as5csvrlr3a55miadhbcvjrjag7g69wxmb8z7rpipppa8f9q7y"; depends=[lmtest sandwich snow]; }; + PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PepPrep = derive2 { name="PepPrep"; version="1.1.0"; sha256="1s2xn05xry50l9kf1mj6yd1dpc7yp6g3d00960hswvhznb0a4l84"; depends=[biomaRt stringr]; }; - Peptides = derive2 { name="Peptides"; version="1.1.1"; sha256="0a6806n7lpdyvmsbvrm0fd124dxd4q8ka0dxb22ri26n60vcyybr"; depends=[]; }; - PerFit = derive2 { name="PerFit"; version="1.4"; sha256="1pjyns9qsqr7c3m5n8a12z3i2b0y98alq0fs84r909m4m5lb22k3"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; - PerMallows = derive2 { name="PerMallows"; version="1.10"; sha256="1h3r4cpyc0fsxz4vr75jyah9gjwj6f7sbmm9yk7p8kk1wagp4a44"; depends=[Rcpp]; }; - Perc = derive2 { name="Perc"; version="0.1.1"; sha256="0yckjgbapcja3qp718f48r1wfhc25dy5y8138x45w5vbdsj4jrrx"; depends=[]; }; + PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; + Peptides = derive2 { name="Peptides"; version="1.2.1"; sha256="0s6d3b9qgc38az11pa7r427dzcfhf2a2hl4c97av8c43hfvyrnzi"; depends=[]; }; + PerFit = derive2 { name="PerFit"; version="1.4.1"; sha256="0mzd9yrgsswxlhljlk8nxi0dhy3k4a9jax9w9c9s29j4m7z9jf01"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; + PerMallows = derive2 { name="PerMallows"; version="1.12"; sha256="0f886q0vgplrprzwrjcjh4g92i1nzkzpzp4qhr4n9kkz8rrxf125"; depends=[Rcpp]; }; + Perc = derive2 { name="Perc"; version="0.1.2"; sha256="0p6l4b536jjz4lmgsdrxqsh77lx4vkb6hbyd6vhbc102m5x3b1yc"; depends=[]; }; PerfMeas = derive2 { name="PerfMeas"; version="1.2.1"; sha256="1x7ancmb41zd1js24rx94plgbssyc71z2bvpic6mg34xjkwdjw93"; depends=[graph limma RBGL]; }; PerformanceAnalytics = derive2 { name="PerformanceAnalytics"; version="1.4.3541"; sha256="1czchsccsbdfjw743j6rm101q2q01pggyl8zmlva213pwm86zb3v"; depends=[xts zoo]; }; + PeriodicTable = derive2 { name="PeriodicTable"; version="0.1.1"; sha256="0r14byi2pmgvmpl07dhqq4m00ddfaixnzqd5kgav1gxmsw6bk35l"; depends=[]; }; PermAlgo = derive2 { name="PermAlgo"; version="1.1"; sha256="16fhdgr4nza9yknsbwiv8pgljfwp8hhva0crs4dbfd0w4j97n5fp"; depends=[]; }; - PhViD = derive2 { name="PhViD"; version="1.0.6"; sha256="04vh3892fwb8pn2wmsw5449al80z5sm6avi6b67shky942dasl17"; depends=[LBE MCMCpack]; }; + PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; }; + PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="1.1.4"; sha256="1xzirhj05gjl4jszz493g8r629jpllnkqk19yjyjj69gmnlalpdy"; depends=[Biobase caTools downloader magicaxis piano RColorBrewer]; }; PhaseType = derive2 { name="PhaseType"; version="0.1.3"; sha256="092dqyqfaxj8qpwxcjb5cayhnq597rfjz1xb93ps4nrczycqs0l6"; depends=[coda ggplot2 reshape]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; - PhyActBedRest = derive2 { name="PhyActBedRest"; version="1.0"; sha256="0fpg17fwap12da7xka8pnd1wk6rbmw3zl099588g2r05wq3425sx"; depends=[]; }; - PhySortR = derive2 { name="PhySortR"; version="1.0.6"; sha256="0v5d0klii1sfs43np18aj2587li3jawqirvabjf51lz2iciagcl9"; depends=[ape phytools]; }; - PhyloMeasures = derive2 { name="PhyloMeasures"; version="1.1"; sha256="1wxm9yiplasxhqxs3qxys46k1i7n459frxxh275abczafq46l8if"; depends=[ape]; }; + PhyInformR = derive2 { name="PhyInformR"; version="1.0"; sha256="10d720ww909b1xmdrms554pnn0757nzppnrniar4n157mh0qw7ms"; depends=[ape doParallel foreach geiger ggplot2 gplots gridExtra hexbin iterators PBSmodelling phytools RColorBrewer]; }; + PhySortR = derive2 { name="PhySortR"; version="1.0.7"; sha256="1xpxkd2bf3xdsfwa0bzkppr6y7p6v7s4iy0x0m8fiwj93n9jh0pz"; depends=[ape phytools]; }; + PhyloMeasures = derive2 { name="PhyloMeasures"; version="2.1"; sha256="01axs78s10y1bkx8dbs9vvnphdzik7hpibkwyib1x9mznmyg90hr"; depends=[ape]; }; + PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.0.0"; sha256="0xrvrfq28a9ivdrbc5s05bpxk4vsij1qqyv01md5c687bl45pj7a"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; + PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.0"; sha256="0gmqh700cf6aiagb45iyyf85pgp3b86fx7fbv9lrsm4mda0r8h75"; depends=[chron lubridate stringr]; }; PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.1-1"; sha256="1aqyip7psf3pdrxkpidfldkk9naihvnc7s3n6w6vvr9h1l5mpmvc"; depends=[]; }; Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; }; - PivotalR = derive2 { name="PivotalR"; version="0.1.17.45"; sha256="13rw7y2n2hnyj2lslkb78qhj05765k9snkgdhh4dfnlgnyb19kkw"; depends=[Matrix]; }; + PivotalR = derive2 { name="PivotalR"; version="0.1.18.3"; sha256="14l7y57zmfr7h4bq01j83am2plxx320kkhbsh0x2ypif9dni4rf2"; depends=[Matrix]; }; + Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; + PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.5.2"; sha256="0bhrz0c134ckfw8b8f0pwa5jkwjy1v7brqcsi6rjdywg0zw2qhxw"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; }; PlayerRatings = derive2 { name="PlayerRatings"; version="1.0-1"; sha256="0fdk70vfxgmf2hy6j0djbksi5znvilsi74rrbqd0lfhi841j15qj"; depends=[]; }; PlotPrjNetworks = derive2 { name="PlotPrjNetworks"; version="1.0.0"; sha256="13kbyx2phxb3kss6l32f7krf4k5i350indlsmbhav686v0h3nsgp"; depends=[ggplot2 reshape2]; }; PlotRegionHighlighter = derive2 { name="PlotRegionHighlighter"; version="1.0"; sha256="0n1nkfr3sdaq6f5p9kgx4slrsvhpdbax3rinrkfkb1vnjj4swj77"; depends=[]; }; + PoSI = derive2 { name="PoSI"; version="1.0"; sha256="0c08czjvm09mcnkqnas4l22v22r9akgklnacx1j62smk4m546q2m"; depends=[]; }; PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.5"; sha256="1m6sycca44h8kdf9cd67annw6dxxwiscidzfnjrzqmqa4v6n7rsg"; depends=[dplyr SmarterPoland]; }; PoiClaClu = derive2 { name="PoiClaClu"; version="1.0.2"; sha256="1j593sc344h9iy7if1ppihx2qd73dv32d77d8ckac43i7b2lig24"; depends=[]; }; - PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.0"; sha256="0a2v5iwrglg4r6zj5qbbg66638kcf45mxw2gs3qv2zpnfkabadnq"; depends=[BB corpcor Matrix mvtnorm]; }; - PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.1"; sha256="151qqxd2rgh6jxzpclxxa51apiif77j122r2w23bdijkb85sqy9z"; depends=[corpcor GenOrd Matrix mvtnorm]; }; - PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.0"; sha256="1x41mwvdria48cjr3dyq4d0l8v8kp3v9aayfl6jfxy6dhjwdg4vz"; depends=[BB corpcor GenOrd MASS Matrix]; }; - PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.1"; sha256="1d6bb2486g5llpbpljmvagw4jijwslqi52jnpkamgzwz6w9y9svy"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; - PoisNonNor = derive2 { name="PoisNonNor"; version="1.0"; sha256="1i00knyv5m6p9rllkc440cg2agzs36am5b5w9n90506nq36xp8qm"; depends=[BB corpcor MASS Matrix]; }; - PoisNor = derive2 { name="PoisNor"; version="1.0"; sha256="147ma6qg6nwxzp022jm5mpijhg3jz489qclr9g2mli5mhgm31f8j"; depends=[corpcor Matrix mvtnorm]; }; + PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.1"; sha256="02xa028jrc50fmrasidjsh5h6z9i8gyyc68q6809ic1bs23sq06i"; depends=[BB corpcor Matrix mvtnorm]; }; + PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.2"; sha256="0ig3iqj0h2v4a4ahf8l2nfvjx4846skkdk5sb7qab8bkqqqkmbpy"; depends=[corpcor GenOrd Matrix mvtnorm]; }; + PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.2"; sha256="0bpgr3zzma04l8652da39vifszjyq17sx2hdq5nsqw3fb2s13zyh"; depends=[BB corpcor GenOrd MASS Matrix]; }; + PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.3"; sha256="0y29p06q977qiybzgay7yx779blv29b8i1vmxfwklc5bm3xiplri"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; + PoisNonNor = derive2 { name="PoisNonNor"; version="1.2"; sha256="01mixrlpk1vcqh9v5qiz9vkn9rkwks3hss91sjyyw3jjqpggxvp6"; depends=[BB corpcor MASS Matrix]; }; + PoisNor = derive2 { name="PoisNor"; version="1.1"; sha256="0z5h8rdb7kjqzasrdvkpkvwv05rfazv92cza8pln1qrvi6cdk5f3"; depends=[corpcor Matrix mvtnorm]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; - PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.1"; sha256="1j7pxkwjrhmgffrqpkykvsdvflqn93z6in2ysn1gs6qvk5vlrnbi"; depends=[gtools]; }; + PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; + PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; PolynomF = derive2 { name="PolynomF"; version="0.94"; sha256="006ds50ivq91v2jyhgpm5rfaipxbzsnljrki6fjplcw07g0frz71"; depends=[]; }; - Pomic = derive2 { name="Pomic"; version="1.0.2"; sha256="1i3zsz7gc4n4vid3yi3srrv04qk1678wqyyw303pfibiyfd4m80q"; depends=[]; }; - PopED = derive2 { name="PopED"; version="0.3.0"; sha256="1ahgnrzjldiqj0a561x8phad62qb5ldrck1az3qcrqvm7n6h6icb"; depends=[codetools dplyr ggplot2 MASS mvtnorm nlme]; }; + Pomic = derive2 { name="Pomic"; version="1.0.3"; sha256="16c0z50zlr9vb1g3j7zdgm2nx595mbwmr4hry184fvkv2hrkk4xc"; depends=[]; }; + PopED = derive2 { name="PopED"; version="0.3.2"; sha256="1lvzqpij4dqbw144ya25bhlx96mwaxz932r0bl3jsx1si9ijb8xz"; depends=[codetools dplyr ggplot2 MASS mvtnorm]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; - PopGenReport = derive2 { name="PopGenReport"; version="2.2"; sha256="0chpfgxpjbp0ci1h2q60gsbwdbqw14wa3pd7y6la3bz7pmsdbnwf"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; - PopGenome = derive2 { name="PopGenome"; version="2.1.6"; sha256="1wk5k5f80l7k6haiaikhgaqn67q5n7gm632i3yz3frj1ph7bwjb7"; depends=[ff]; }; + PopGenReport = derive2 { name="PopGenReport"; version="3.0.0"; sha256="0z4g7ll3dk9mgawnn7k0ysgj8w55adivc4zcrr898x399g7vnfx4"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; + PopGenome = derive2 { name="PopGenome"; version="2.2.0"; sha256="1rwqv7pa5is2ciyx25q042jxk7jwvr7v64r2z32ak8dc1218x35a"; depends=[ff]; }; PopVar = derive2 { name="PopVar"; version="1.2.1"; sha256="09az5wa0zai6axhvrljqdjn74nb7jikqwjqy8f570qxb6jbgfgay"; depends=[BGLR qtl rrBLUP]; }; PortRisk = derive2 { name="PortRisk"; version="1.1.0"; sha256="05yxqcv0cijy3s9zx68f9xy59jv55kmj3v0pz5pgl17j23kb9rlc"; depends=[copula MASS MCMCpack tseries zoo]; }; PortfolioAnalytics = derive2 { name="PortfolioAnalytics"; version="1.0.3636"; sha256="0xva3ff8lz05f1jvx8hgn8rpgr658fjhf3xyh9ga1r7dii13ld50"; depends=[foreach PerformanceAnalytics xts zoo]; }; - PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.2"; sha256="0qf9h4gwq148m4q9x2avbzw9m07zbs4ljhlqf8glk50bs6vjpfi2"; depends=[PortfolioEffectHFT rJava]; }; - PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.5"; sha256="0mwwfsf6bngxdk10sya19k2mhy4pq9pgyzz59pd5zxgs0rx4hl6k"; depends=[ggplot2 rJava]; }; + PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.4"; sha256="1sfgkwyn7vfy3rqb1cglywiv5xmyxhzvj38vgrvfq5jf3hvzsg21"; depends=[PortfolioEffectHFT rJava]; }; + PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.7"; sha256="043bpyrzl5r7gifi450l162sp7l5pgb1p6arfbf118i0jg0m61j9"; depends=[ggplot2 rJava zoo]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-2"; sha256="05ds0a7jq63zxr3jh66a0df0idzhis76qv6inydsjk2majadj3zv"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.5"; sha256="0zr2p2hyxdh194n3s0g71q9zyvl67czp0wc39zl3fivfk3zkf98r"; depends=[Rcpp RcppArmadillo]; }; - Power2Stage = derive2 { name="Power2Stage"; version="0.4-3"; sha256="1bad2r9kdpg5i9pqz6754xywwm1c1mbl16dxdnb92pjy2pkq1q7x"; depends=[mvtnorm PowerTOST]; }; - PowerTOST = derive2 { name="PowerTOST"; version="1.3-4"; sha256="0zjbnxd9l8m9bw7p3px0qxv8xjhm2w4fx0i1j0jpm95q5i01cgmm"; depends=[mvtnorm]; }; - PracTools = derive2 { name="PracTools"; version="0.3"; sha256="1n9h28nzxy0fs27w1gwyrbaijr437xqiprmkal0i4dz6da7w4928"; depends=[]; }; + Power2Stage = derive2 { name="Power2Stage"; version="0.4-5"; sha256="0wjry83dkrnl6bblb0688hx5ihwwkya05dwb9nrnv39033ksd0a9"; depends=[mvtnorm PowerTOST]; }; + PowerTOST = derive2 { name="PowerTOST"; version="1.4-3"; sha256="1yxxg0y8w6g5138wznd3fil3pmizb20ar1h5gavlbil5b1bhhm44"; depends=[cubature mvtnorm]; }; + PowerUpR = derive2 { name="PowerUpR"; version="0.1.3"; sha256="1znhkyxl8qrs288zf0cr6sxgq6ir029fmilda0k73scc6k1jxz7f"; depends=[nloptr]; }; + PracTools = derive2 { name="PracTools"; version="0.4"; sha256="1klknzbpgjyvrws6d7gwrdmglc16xag3pa3i8rk0zg62wvyb4l1v"; depends=[]; }; + PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; + PredPsych = derive2 { name="PredPsych"; version="0.1"; sha256="1nhaainpp9qr30l6g74vl2qcdy64amrn08m4fsjz3ahbvr908mkj"; depends=[caret e1071 ggplot2 MASS mclust party plyr randomForest rpart]; }; PredictABEL = derive2 { name="PredictABEL"; version="1.2-2"; sha256="08c7j2in1wlas6nmy44s08cq86h5fizqbhsnq312dllqdzmb2h9s"; depends=[epitools Hmisc PBSmodelling ROCR]; }; + PredictTestbench = derive2 { name="PredictTestbench"; version="1.1.3"; sha256="14np4zvr0labhqxzsv07iqzldfxmnsfk91qpfqz7vyiq0vwcymp4"; depends=[forecast ggplot2 imputeTestbench PSF reshape2]; }; PredictiveRegression = derive2 { name="PredictiveRegression"; version="0.1-4"; sha256="15vkisj3q4hinc3d537s8inhj3wk62q67qhy050xmp9j563ainmd"; depends=[]; }; PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; - PrevMap = derive2 { name="PrevMap"; version="1.3.2"; sha256="0dy14cyzlnf33rw3f2imfiskblg833cp3fflpw28zr52m36crrd2"; depends=[geoR maxLik pdist raster splancs truncnorm]; }; + PrevMap = derive2 { name="PrevMap"; version="1.4"; sha256="1yvq2lpylwkhhbz3ys06a6fyfcwcc9zq58ihgh3yhs6f79jcfv2m"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-21"; sha256="1jwq8f0dnngj8sfbmcmxy34nkkq6yjw0mq3w1f8rasz67v3bwzp3"; depends=[]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; + ProFit = derive2 { name="ProFit"; version="1.0.2"; sha256="0wqm5c3syrpkbb7rwkfgfbva52a0bjbl8fl8rxi624vc4rwicr87"; depends=[fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; }; ProNet = derive2 { name="ProNet"; version="1.0.0"; sha256="10r0gcxv0djrw99nd6a1jrnwvqmidw10ll645gvkp8l39li0107n"; depends=[igraph linkcomm MCL Rcpp]; }; - ProTrackR = derive2 { name="ProTrackR"; version="0.2.3"; sha256="0zdysy58s2prla07qfhlhsycmnnf7ydjz5dlhhng5da3bc1nlrq2"; depends=[audio lattice signal tuneR]; }; + ProTrackR = derive2 { name="ProTrackR"; version="0.3.4"; sha256="10xwj1d7k1n85hjdwh7q7pkbmcb625y6fzcbyvnplin25v2b03qc"; depends=[audio lattice signal tuneR XML]; }; ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; ProbitSpatial = derive2 { name="ProbitSpatial"; version="1.0"; sha256="0pq5bsjd00qc83c7x8vlpsxdksywlnfg7rlsvb6j21fz9wi3hpas"; depends=[Matrix numDeriv RANN Rcpp RcppEigen speedglm]; }; ProfessR = derive2 { name="ProfessR"; version="2.3"; sha256="1y88as4xjvdm2v2ms5l7c6ziq7sll6qkrpgzdd4xnbcjx7c0g9w8"; depends=[RPMG]; }; ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; }; ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; }; - ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.6"; sha256="0ijsy49gghnki5l63vg5l2awy57kbxbih618j5i5lxs44g15sa5v"; depends=[]; }; + ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.7"; sha256="0jf8r9lbczvjvnzf15lz6fm31naxm1fpqni88484yrd6vpxjacq6"; depends=[]; }; + ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.0"; sha256="1baf4v9c2pqqmlgxs1jf7fhwqbsw0l1g7rdiia21acxix2j3b7wj"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.2-5"; sha256="0wnc5h4390w4rglr7gjh6827f5r7gdhajx1iwp5fggdlm808hgq7"; depends=[]; }; PropClust = derive2 { name="PropClust"; version="1.4-2"; sha256="13ac895i7ljayyqcjjmwvwar6wf1j0qssazcb5nlz8rw155qwavs"; depends=[dynamicTreeCut flashClust]; }; PropScrRand = derive2 { name="PropScrRand"; version="1.1"; sha256="0cj62dzg4zm8d1g8h7qmviiwm93cwplppbi0p674fmmf1wy84v9s"; depends=[]; }; ProteinDescriptors = derive2 { name="ProteinDescriptors"; version="0.1.0"; sha256="1ydm8aym1wwxmfh4krh84nmj1wkgb574igg1sywl58l3qlnhya0l"; depends=[]; }; + Przewodnik = derive2 { name="Przewodnik"; version="0.16.12"; sha256="1aq80aqflfm1ypqa51h10mc3g0qdr651j6g1b7008k7h0ryq42gv"; depends=[PBImisc PogromcyDanych]; }; PsiHat = derive2 { name="PsiHat"; version="1.0"; sha256="0an71x75j6ih55alxp7kfwi0qf4z3y5bwswrjk01z2w4b9glacqh"; depends=[qvalue]; }; PsumtSim = derive2 { name="PsumtSim"; version="0.4"; sha256="0079kb1bgsxs4cwmn33rbbk2jgq39rdjfgz9k9hc64iyzz0i6na3"; depends=[boot EffectsRelBaseline]; }; - PtProcess = derive2 { name="PtProcess"; version="3.3-10"; sha256="175gdyvj1l1d3vm00p0z4sn1ggaf3hly383ngzx2l029nsrxz0zf"; depends=[]; }; + PtProcess = derive2 { name="PtProcess"; version="3.3-12"; sha256="14d39xxgkqnqq79v9sp6g9csj2rp6pix2hzg9acjdmw1xyadn71h"; depends=[]; }; PubBias = derive2 { name="PubBias"; version="1.0"; sha256="0dr5dhfx57knrs05pbx9ngg4k2937n8gjzsgd0jfqd8dfxhy051k"; depends=[R_utils rmeta]; }; - PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.2"; sha256="1xn4ygpvj6pm548yj5kjh2l8n59p2caihfpbkykvbkzgf7hq8p00"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; + PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.3"; sha256="1d9k5ilrxz9brv08nl2iqpalqjf4g0bv49qxywq970g66jyxjjij"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; PwrGSD = derive2 { name="PwrGSD"; version="2.000"; sha256="0qxvws9mfrnqw5s24qhqk6cbffjm13z7awyxdmnilazghpiq1p7s"; depends=[survival]; }; PythonInR = derive2 { name="PythonInR"; version="0.1-3"; sha256="0p4h30wqsz8czz6r4xjg5q79190hq242x9fsaw7v5433px1gmr44"; depends=[pack R6]; }; - QCA = derive2 { name="QCA"; version="2.1"; sha256="0zdg2s0y1qgxyvrg5iims9il6cnsbf0hchj3l8z1b9w50gggdm8k"; depends=[lpSolve QCAGUI shiny venn]; }; - QCA3 = derive2 { name="QCA3"; version="0.0-7"; sha256="0i9i2i633sjnzsywq51r2l7fkbd4ip217hp0vnkj78sfl7zf1270"; depends=[lpSolveAPI]; }; - QCAGUI = derive2 { name="QCAGUI"; version="2.1"; sha256="1lbdx2hrj8im5z58x20l4sgihvc2njw8v1dgy3cmwcfka1l1dw3p"; depends=[lpSolve shiny venn]; }; + QCA = derive2 { name="QCA"; version="2.5"; sha256="0f0gia23aqkhvxna15vcck75im4r3nc6mbs1svg5hldc33088wh7"; depends=[fastdigest lpSolve shiny venn]; }; + QCA3 = derive2 { name="QCA3"; version="0.0-8"; sha256="1cqk5hhx57c4ayg0kn4gz3sfwm1jik96a80psfyb7cnmbxwdgw2s"; depends=[lpSolveAPI]; }; + QCAGUI = derive2 { name="QCAGUI"; version="2.5"; sha256="1v15rd5wmdx1zdssklbchw71cr9v1mjp1mfkv5kg2xa3hp0x2hz9"; depends=[QCA]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; - QCApro = derive2 { name="QCApro"; version="1.0-0"; sha256="1k7av1b8wmr91a6prvgkny65hvf185389shgxncywp51jqaxpikp"; depends=[lpSolve]; }; - QCAtools = derive2 { name="QCAtools"; version="0.2.1"; sha256="167vjlh8b1a1wxvfnqbh4x429xvfhf789v8k6brlh7x5n6bmk114"; depends=[directlabels ggplot2 QCAGUI stringr]; }; + QCApro = derive2 { name="QCApro"; version="1.1-1"; sha256="0rp1mcgp21m4wi301kwb7vzilb4z0pq78h9wavkpyxnq0ch6hnlh"; depends=[lpSolve]; }; + QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; + QCEWAS = derive2 { name="QCEWAS"; version="1.1-0"; sha256="0snqg1q9848g8gmxxlz1fhw4cnfxwp28qkfyrpc0yzmkswvysx6v"; depends=[]; }; QCGWAS = derive2 { name="QCGWAS"; version="1.0-8"; sha256="1wn1kddgfmqv326pihnavbgsbd2yxrlq5s2xgi6kbprssxvj8bk1"; depends=[]; }; QCSIS = derive2 { name="QCSIS"; version="0.1"; sha256="0ibh3060jxf426svdfxiryvfhr8pwk991xs653d50ip4f9290y3a"; depends=[]; }; + QCSimulator = derive2 { name="QCSimulator"; version="0.0.1"; sha256="1ff7xagnzibhrwrmkqyky4ik3kx7rrlajrs1ypm210sl1d73jwvs"; depends=[ggplot2]; }; + QFASA = derive2 { name="QFASA"; version="1.0.2"; sha256="1gfclbalcfcfmb8bq7rp8kpnaqblai9y7n7n7zh4a3qmia5vrz2b"; depends=[Rsolnp]; }; QFRM = derive2 { name="QFRM"; version="1.0.1"; sha256="1k79sq9il4326q7ivwdwlzw7drjv4pwqra3fr8kyyqcpmxh9296h"; depends=[]; }; - QICD = derive2 { name="QICD"; version="1.0.1"; sha256="136f7qv69x0a5bz5pa1jfawn7vikd90qv3fk8pjga9azpmfjj2wn"; depends=[]; }; - QPot = derive2 { name="QPot"; version="1.0"; sha256="1dw2hzl6hif9g5kn37zyvd1gglqg67ki6ii42rl4vr5p3ar4f8pb"; depends=[MASS]; }; + QGglmm = derive2 { name="QGglmm"; version="0.5.1"; sha256="1112w9dwbr9smxa869w4833iw1vclscr1zbjn2f0xklnpn3nb40d"; depends=[mvtnorm R2Cuba]; }; + QICD = derive2 { name="QICD"; version="1.1.1"; sha256="0mg17w62yzgslifbc08vglsxwiczicgzilczidpjwlcrg3lq8jjc"; depends=[]; }; + QNB = derive2 { name="QNB"; version="1.1.7"; sha256="1xakzwsaf5297nxx5a193ji0dn30rw3yly4rhdjqabgrh3fgzv92"; depends=[locfit]; }; + QPot = derive2 { name="QPot"; version="1.1"; sha256="1ivkk5wdd1lp6v4hwmpr9g230kd7zgmj0vnv5fw0svwpb8zzz14x"; depends=[MASS]; }; + QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; }; + QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; QRM = derive2 { name="QRM"; version="0.4-13"; sha256="0zxhm1bdbs4jizd909vw9yjdn484vmcrwcmpk3a7gr4142q9kdjh"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; + QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; + QRegVCM = derive2 { name="QRegVCM"; version="1.0"; sha256="15fgmgwp9b4bjk46c3myfvq7ipl0qyfqslmf4ha184vi7s600ymj"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; QTLRel = derive2 { name="QTLRel"; version="0.2-15"; sha256="15wli0mpcmp7vc4jwp393w0qfm5g5n8dj724j38s711ir98w660b"; depends=[gdata lattice]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; - QZ = derive2 { name="QZ"; version="0.1-4"; sha256="1k657i1rf6ayavn0lgfvlh8am3kzypgb1jhf2by147gv103izkrz"; depends=[]; }; + QVM = derive2 { name="QVM"; version="0.1.1"; sha256="0dnr4h4084n505vrxfrx3czrkqdbna8s4fxpwr5czfilbfbxhpar"; depends=[gWidgets IMPACT ltm multilevel mvtnorm nlme pander psych]; }; + QZ = derive2 { name="QZ"; version="0.1-5"; sha256="1z531yhlmm7a4m63p84q9nsnsrsiwfqrq505xg6crfygkb5kircc"; depends=[]; }; QoLR = derive2 { name="QoLR"; version="1.0.2"; sha256="1vvs5a4yl1isy0kqxzr2kcfg3y6bg3n2gsy7a2qgch92vjffd18a"; depends=[survival zoo]; }; - Qtools = derive2 { name="Qtools"; version="1.0"; sha256="12ifrk0g63hmfwq17sl25bz2m256jzp6n3lycsm2izm7rc0rv2c8"; depends=[boot MASS mice quantreg]; }; + Qtools = derive2 { name="Qtools"; version="1.2"; sha256="0432ip73aldblq3yyig8d47a56j12fs30fpz8sxvfj186ssawych"; depends=[boot MASS mice quantreg]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; QualInt = derive2 { name="QualInt"; version="1.0.0"; sha256="1ms96m3nz54848gm9kdcydnk5kn2i8p1rgl2dwn7cqcqblfvsr4j"; depends=[ggplot2 survival]; }; - Quandl = derive2 { name="Quandl"; version="2.7.0"; sha256="15j8wgk067ixmcp70k7fi6wnyl7mz26ljdgrcgy6dwgfng6286h8"; depends=[httr jsonlite xts zoo]; }; + Quandl = derive2 { name="Quandl"; version="2.8.0"; sha256="0n1c4343ki8nia7qrq2m9zb7b05qr3yjwvk1ji7m44sa613w6y5l"; depends=[httr jsonlite xts zoo]; }; QuantPsyc = derive2 { name="QuantPsyc"; version="1.5"; sha256="1i9bh88r8zxndzjqsj14qw64gnvm5a9kvhjhzk3qsrvl3qzjgh93"; depends=[boot MASS]; }; + QuantTools = derive2 { name="QuantTools"; version="0.5.3"; sha256="01q71n9q9fqg6yn8mxnmd3j0mwp7ryxrkfw5cvpjwd1i9ld5d7jd"; depends=[data_table fasttime Rcpp RCurl readxl]; }; QuantifQuantile = derive2 { name="QuantifQuantile"; version="2.2"; sha256="01bdz8a6nhjil6n2z62x5g41v3d6md5v16g0ladsl5zc8raivqdq"; depends=[rgl]; }; - QuantumClone = derive2 { name="QuantumClone"; version="0.15.11"; sha256="1aaikqjcgbwz8wwi89b8aj6r0vzz2haj9wlv0ik1xbhsjlyvvcyz"; depends=[doParallel foreach fpc gridExtra rgl]; }; + QuantileGradeR = derive2 { name="QuantileGradeR"; version="0.1.1"; sha256="1zwc6bg636gk8zll7wpznd3pzl611hcj2fmzp8b9505rra13p0g2"; depends=[]; }; + QuantumClone = derive2 { name="QuantumClone"; version="0.16.8.19"; sha256="019rhpvc4by3pizy3i6sw04230hzhmq79mkhjin3777mn9gdnzfm"; depends=[doParallel foreach fpc ggplot2 gridExtra optimx]; }; QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-8"; sha256="113pxmvwwn331g5dcv2zwsvvi5jgc1v41f38sw9gms06i8x3a7q6"; depends=[edgeR mgcv pracma]; }; Quor = derive2 { name="Quor"; version="0.1"; sha256="1ncl4pj472m881fqndcm6jzn4jkwbnzpc639c9vy5mxa4z569i1g"; depends=[combinat]; }; R_cache = derive2 { name="R.cache"; version="0.12.0"; sha256="006x52w9r8phw5hgqmyp0bz8z42vn8p5yibibnzi1sfa1xlw8iyx"; depends=[digest R_methodsS3 R_oo R_utils]; }; - R_devices = derive2 { name="R.devices"; version="2.14.0"; sha256="1i40033w15q1nazm9ma0gfixb37mdy76yhcssgvaah1dx6p51xb4"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; + R_devices = derive2 { name="R.devices"; version="2.15.1"; sha256="09gmzb87n1ybqwyp4jdpih3w3s7nqkr4hd1qhcqr57kp2pj9jp9x"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; R_filesets = derive2 { name="R.filesets"; version="2.10.0"; sha256="0wdqxskmamqygvxh9jmvkhkgm906yrqci6vivczr9la0j4zwnn0b"; depends=[digest future listenv R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; - R_matlab = derive2 { name="R.matlab"; version="3.5.0"; sha256="1vpdv6ixcfl933r23l6v858ncs1x6gqsmr9nxjjsimx7q56mw6p9"; depends=[R_methodsS3 R_oo R_utils]; }; + R_matlab = derive2 { name="R.matlab"; version="3.6.1"; sha256="013qi3iikikgib23cqg74vpp2ymsbw1zd6zny7m1km2js6gmfchh"; depends=[R_methodsS3 R_oo R_utils]; }; R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; - R_oo = derive2 { name="R.oo"; version="1.20.0"; sha256="1l1x4r69mdchjyi6sq52p580fz3b3bqv6dpn1706y9n4vq47qx24"; depends=[R_methodsS3]; }; - R_rsp = derive2 { name="R.rsp"; version="0.21.0"; sha256="0snc6ps75s3ci6sy8mil1wg2i9xmlr1ygh9n244y1brdvp43dfsw"; depends=[R_cache R_methodsS3 R_oo R_utils]; }; - R_utils = derive2 { name="R.utils"; version="2.2.0"; sha256="1340g3agi4w5ab0kkc85rnfy6q03f13x3i9c58vn2jaaq5lmvy90"; depends=[R_methodsS3 R_oo]; }; + R_oo = derive2 { name="R.oo"; version="1.21.0"; sha256="0723gxjazgqq7v3lwnl7axw3brzcnizvhbd71ijkkv8mz31fwp34"; depends=[R_methodsS3]; }; + R_rsp = derive2 { name="R.rsp"; version="0.40.0"; sha256="1hz5fnxz30m3cc7x7ha1swx4pn8c2244z6ka6v9m3l5lpdgc1367"; depends=[R_cache R_methodsS3 R_oo R_utils]; }; + R_utils = derive2 { name="R.utils"; version="2.5.0"; sha256="17q3w5dlly5xl2srrzsmf9s7vs5d576vqbcs6sr2p5x4qvqa1q8s"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; - R2BayesX = derive2 { name="R2BayesX"; version="1.0-0"; sha256="1p60n14gaqciskzah5haskflpms1g5lh4n57653yysa7fvmfgdhw"; depends=[BayesXsrc colorspace mgcv]; }; + R2BayesX = derive2 { name="R2BayesX"; version="1.1-0"; sha256="043hrznc16j6mkr3h9vjvi9yn6xn497xz5pjp53ks48pzz54jp9p"; depends=[BayesXsrc colorspace mgcv]; }; R2Cuba = derive2 { name="R2Cuba"; version="1.1-0"; sha256="1zmlsambajzxkc9dawlqb0png8s502hwblq0vyhqgc08yf29b43w"; depends=[]; }; R2G2 = derive2 { name="R2G2"; version="1.0-2"; sha256="05d5vybvsi4pyr099916nk1l8sqszs9gaj2vhsx1jxxks8981na7"; depends=[]; }; R2GUESS = derive2 { name="R2GUESS"; version="1.7"; sha256="07w54r5r9v7pa8aklmwbwdcc57j3a3b46b1a7mwmzcl11mcfwdph"; depends=[fields MCMCpack mixOmics mvtnorm snowfall]; }; - R2HTML = derive2 { name="R2HTML"; version="2.3.1"; sha256="01mycvmz4xd1729kkb8nv5cl30v3qy3k4fmrlr2m1112hf5cmp59"; depends=[]; }; - R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-1"; sha256="0gkp5jvvbf9rppxirs1s7vr5nbfkrlykaph3lv20xq8cc8nz9zzx"; depends=[coda digest foreign lattice Matrix rbugs]; }; - R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.1"; sha256="1nnyfhpqgx6wd4n039c4d42png80b2xcwalyj08bmq0cgl32cjgk"; depends=[boot coda]; }; + R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; + R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-3"; sha256="1xxwj59f6mfl48jmwn8n5i6b86kkw8kaxpvirkh74gqan861hrpb"; depends=[coda digest doParallel foreach foreign lattice Matrix memisc rbugs texreg]; }; + R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2"; sha256="1cxr93g0fkdv3lqdh63l2gcp7qn3q42pm1r6nzf35550k9ahkhnv"; depends=[boot coda]; }; R2STATS = derive2 { name="R2STATS"; version="0.68-38"; sha256="1v8mvkvs4fjch0dpjidr51jk6ynnw82zhhylyccyrad9f775j2if"; depends=[cairoDevice gWidgets gWidgetsRGtk2 lattice latticeExtra lme4 MASS Matrix proto RGtk2Extras statmod]; }; R2SWF = derive2 { name="R2SWF"; version="0.9-1"; sha256="0xhq4dyi1mj4n38zylgi6d17d5wp402wm3kic05vgssg4pyfda2d"; depends=[sysfonts]; }; R2WinBUGS = derive2 { name="R2WinBUGS"; version="2.1-21"; sha256="0k8k214x712vjj2k1am4zzf6scccs3b98ysiz4lwxpzm818wp1ps"; depends=[boot coda]; }; - R2admb = derive2 { name="R2admb"; version="0.7.13"; sha256="0sjli498pz1vk5wmw65mca08mramwhzlfli2aih15xj7qzvp0nky"; depends=[coda lattice]; }; + R2admb = derive2 { name="R2admb"; version="0.7.15"; sha256="1v01fbcc7hx6mswn4gkwpm6k171956wk51ls6sgca1i6ia6ckmli"; depends=[coda lattice]; }; R2jags = derive2 { name="R2jags"; version="0.5-7"; sha256="0h1d27cddyacx5m5f23rlki97iwni7clffmb2k7a4bznlnjhn50a"; depends=[abind coda R2WinBUGS rjags]; }; R330 = derive2 { name="R330"; version="1.0"; sha256="01sprsg7kph62abhymm8zfqr9bd6dhihrfxzgr4pzi5wj3h80bjm"; depends=[lattice leaps rgl s20x]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.1"; sha256="08s999m1kfjzabng41d5fpkag7nrdbricnw7m4jvj1ssqfnil2hj"; depends=[bitops RCurl RJSONIO]; }; R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; - R6 = derive2 { name="R6"; version="2.1.2"; sha256="0yad91i9p4r8bbz6nq8zny39y767n9an7ak5p275ynx8km6v3yqv"; depends=[]; }; + R6 = derive2 { name="R6"; version="2.2.0"; sha256="1ir51pb0y6yj05qaxsflk4a6hv8n73cwlb0qajcskbrz632dsyvx"; depends=[]; }; + R6Frame = derive2 { name="R6Frame"; version="0.1.0"; sha256="0ib0van2qk0p89qmii8naj1jx56i6j7srvydzm41pyq2xdg0bmga"; depends=[data_table lazyeval R6]; }; + RAC = derive2 { name="RAC"; version="1.0.1"; sha256="1idy7kik0gfzd404xs8g2mg5ycinld1wp1a9lxd2wqmyc8ghpd0y"; depends=[matrixStats plotrix rstudioapi]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; - RADami = derive2 { name="RADami"; version="1.0-3"; sha256="0rg07dsh2rlldajcj0gq5sgsl1i3qa28bsrmq88xcljg5hnr4iqn"; depends=[ape Biostrings geiger phangorn]; }; + RADami = derive2 { name="RADami"; version="1.1-2"; sha256="1k4g58r64i19j8wj3d202283bnwaxf19l7ckiz29dlw4zidx6mvz"; depends=[ape Biostrings geiger hierfstat IRanges phangorn]; }; RADanalysis = derive2 { name="RADanalysis"; version="0.5.5"; sha256="1py07p24i1pky8wwyy8ajmkg6h2n7nbpxp1w6lrkiyl0p2kgjm20"; depends=[scales sfsmisc]; }; RAHRS = derive2 { name="RAHRS"; version="1.0.2"; sha256="0s7vkmyc3yh62m2xbsvajgvi9xdw5x4irnp7rcllhqa7z9nj50c9"; depends=[pracma RSpincalc]; }; RAM = derive2 { name="RAM"; version="1.2.1.3"; sha256="1p6rqqbp5q3pqy9m6npml52nkfh8pd4kc245kb22qjslbvl3rrkn"; depends=[ade4 ape data_table FD ggmap ggplot2 gplots gridExtra labdsv lattice MASS permute phangorn phytools plyr RColorBrewer reshape reshape2 RgoogleMaps scales vegan VennDiagram]; }; - RAMP = derive2 { name="RAMP"; version="1.0"; sha256="18cz8gvb49j1hic71dzfcl17hz5gjdcabqvq84yr1h7iqkrq95cq"; depends=[]; }; - RAMpath = derive2 { name="RAMpath"; version="0.3.8"; sha256="1p1l6iirb314n5246kyyz0r3ja4v05xb5a6aq9k26wsb5m42x85k"; depends=[ellipse lavaan]; }; + RAMP = derive2 { name="RAMP"; version="1.9"; sha256="0fy74cj1hjlwsdpayv0mkh7cn829bd1c7z9mgng304vh5ga02nh2"; depends=[]; }; + RAMpath = derive2 { name="RAMpath"; version="0.4"; sha256="0blixfmgiq22hd356hrp4vbhfkkgh0a58143nhirjx3sav9pxc1v"; depends=[ellipse lavaan MASS]; }; RANKS = derive2 { name="RANKS"; version="1.0"; sha256="1lvaya9jlqrr9klqznw4fz5h5x0sw191ci74hpymb4gzhhxcbp27"; depends=[graph limma NetPreProc PerfMeas RBGL]; }; RANN = derive2 { name="RANN"; version="2.5"; sha256="007cgqg9bybg2zlljbv5m6cmlm3r6i251018rpgjcn0xnm9sjsj7"; depends=[]; }; RANN_L1 = derive2 { name="RANN.L1"; version="2.5"; sha256="0sjf92hdw9jczvq1wl5syckhvik7wv0k9vrrgw4nnnsabc25v9pf"; depends=[]; }; RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; - RAdwords = derive2 { name="RAdwords"; version="0.1.6"; sha256="0rrkw3s0r7qp87ikphi8i8dq5j46h5708h9phqi3hc0qkmkld8i8"; depends=[RCurl rjson]; }; + RAdwords = derive2 { name="RAdwords"; version="0.1.11"; sha256="069ik7irl68chwpfdpp06ng2w272kr0cx7fjd1c6zz4nrsw8zxrn"; depends=[RCurl rjson]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; - RAppArmor = derive2 { name="RAppArmor"; version="2.0.1"; sha256="19545bblzplnqbkf6p23ap6b51ma8n30ivxrx57p1rmnnnj55vdz"; depends=[]; }; + RAppArmor = derive2 { name="RAppArmor"; version="2.0.2"; sha256="18zmqqh4rnbnaiwi60jfp4xi8fp63ydr3jk9w4ijmy6s4hkpp75g"; depends=[]; }; RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; }; RAtmosphere = derive2 { name="RAtmosphere"; version="1.1"; sha256="0mk43bq28hlrjwaycsxca458k8xf00q58czgc17d8yx3kz17a5i0"; depends=[]; }; - RBPcurve = derive2 { name="RBPcurve"; version="1.0-33"; sha256="0n49qiam8ydlhhqk2f1h0rqdsl4ivx2vmz9n11kf4yfrq06a02a7"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; + RBMRB = derive2 { name="RBMRB"; version="2.0.2"; sha256="0znkw5n123xhn902nyv1p0bpm0djyscsyqdab3bpps0n35mfxlq5"; depends=[data_table ggplot2 httr plotly rjson]; }; + RBPcurve = derive2 { name="RBPcurve"; version="1.1"; sha256="0g243h4zpjigayf7kryfpdvshycaxz12ifqilyk3ylz91kk61nmb"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; RBerkeley = derive2 { name="RBerkeley"; version="0.7-5"; sha256="049qvlpqwcaj82fdl815c0b2il7jbs6karibqpkq0fa3hq0q4hzz"; depends=[]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; - RCALI = derive2 { name="RCALI"; version="0.2-15"; sha256="0w9807dyjghqy1rnv2c0k4kdjlwxzg5fk5r3rsqrmzjj4r8x9g9w"; depends=[splancs]; }; + RCALI = derive2 { name="RCALI"; version="0.2-17"; sha256="1bic7dwxkvgxl3a26glxm6h6gmq4xad70dbrnrnb2d6n5v1dnniw"; depends=[splancs]; }; RCEIM = derive2 { name="RCEIM"; version="0.2"; sha256="0l3lfx3zqxf310rhvjkn977xchxzi7cbzij3ks0nqlx55x5ica9w"; depends=[]; }; - RCMIP5 = derive2 { name="RCMIP5"; version="1.1"; sha256="1aqcwxh2p4z7wn4p224xdiaharbr51rj51aa760rirs5s1ra7f6q"; depends=[abind digest dplyr reshape2]; }; - RCPmod = derive2 { name="RCPmod"; version="1.4"; sha256="1psn1w8ws0n96jqvd98l0wl0l46w0691c5vm9aarql2pqnc73lw9"; depends=[gtools numDeriv]; }; + RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; }; + RCPmod = derive2 { name="RCPmod"; version="2.154"; sha256="0x4jk5xv3z3nyi99rv9fh2akhyk4s1736fzsxynqxfm6br3k8mc6"; depends=[fishMod glmnet gtools MASS]; }; RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; }; - RCircos = derive2 { name="RCircos"; version="1.1.3"; sha256="1kskjli7q4cmppm7cm5w2d8ad7h3crcpay1iayas5wkc03fga4gw"; depends=[]; }; + RChronoModel = derive2 { name="RChronoModel"; version="0.4"; sha256="0haqxwic160pnnm90bgchzxmsdwmi6m97i9xrh8js8bp2xn76l5f"; depends=[hdrcde]; }; + RCircos = derive2 { name="RCircos"; version="1.2.0"; sha256="0jj4jj9qnj7pils99hzw9yx5bwi182q4afdsqh7w7d9kzhp6xl3z"; depends=[]; }; RClimMAWGEN = derive2 { name="RClimMAWGEN"; version="1.1"; sha256="0icy560llfd10mxlq0xmc6lbg6a030za9sygw1rpz8sk5j0lvb84"; depends=[climdex_pcic RMAWGEN]; }; - RClone = derive2 { name="RClone"; version="1.0"; sha256="0rbnac1xdpj6g8sq0dd6ja6mi5gl3nxjz3arnzmdwwh3qaqdx91i"; depends=[]; }; + RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; - RCriteo = derive2 { name="RCriteo"; version="1.0.1"; sha256="1wlsp9idywgkcr2v68yj8gabyxd4ss6vzqr4z2id7fgvyqk8fyy4"; depends=[httr plyr RCurl XML]; }; + RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; RCryptsy = derive2 { name="RCryptsy"; version="0.4"; sha256="01rz9wz5y1k77mjw4zs0jng3k4zwqda32m5xvw6kx7vkgzfas6q0"; depends=[RCurl RJSONIO]; }; RCurl = derive2 { name="RCurl"; version="1.95-4.8"; sha256="1yrbm8sypizy18qxkl6534fk2gf2ijxhahw6qldk9v5v3cjl68p7"; depends=[bitops]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; - RDML = derive2 { name="RDML"; version="0.9-1"; sha256="0ir8qp3k326gxy5f0hy144zi8xcgsk6svahz7lr5pjfj05czmxxm"; depends=[assertthat dplyr plyr R6 rlist tidyr XML]; }; - RDS = derive2 { name="RDS"; version="0.7-5"; sha256="13zdan1riq5yzyixywr69svz42i5rp9n3fsz8zwmp2d64y8wsr3j"; depends=[ggplot2 gridExtra igraph reshape2 scales]; }; + RDML = derive2 { name="RDML"; version="0.9-5"; sha256="08q1ixwnxx4j2nwdynswbdy6jw2r97c5a0zlwhaxr888c7hcv6ff"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; + RDS = derive2 { name="RDS"; version="0.7-8"; sha256="0lxnb6zd5lphs9d42pfdzx607w7iz1mpj3z8pb2ri3s4h011g1vn"; depends=[ggplot2 gridExtra igraph reshape2 scales]; }; RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; }; + RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; }; RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; }; RDieHarder = derive2 { name="RDieHarder"; version="0.1.3"; sha256="0wls7b0qfbi6hsq9xdywi4mdhim5b6mrzhvyrm9dxp9z1k7imz6m"; depends=[]; }; - RDota = derive2 { name="RDota"; version="1.2"; sha256="1r56s4ii37szmdwgbnlw2g9576kjvyc79nvnfrsgr5mys62pbrzs"; depends=[XML]; }; - REBayes = derive2 { name="REBayes"; version="0.62"; sha256="03fzmj4illah6xa4j4qh8srzxlrda8i4j71sd3269rs6lf2n9bw7"; depends=[Matrix reliaR Rmosek]; }; - RECA = derive2 { name="RECA"; version="1.1"; sha256="1wgcd53yy4xsi7i674n4255qvvv6988r43q7n7pjqrimp04g1qd0"; depends=[]; }; - REDCapR = derive2 { name="REDCapR"; version="0.9.3"; sha256="0il1b1sc05kigl8937s853a73k54xdr16sr4g8c11qyv54iy8d9a"; depends=[httr plyr]; }; + RDocumentation = derive2 { name="RDocumentation"; version="0.8.0"; sha256="0k733c6b2ggwqry13ynnm9bmnrlf1sszya061wx2w52d3x378r2g"; depends=[githubinstall httr proto rjson]; }; + RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; + REAT = derive2 { name="REAT"; version="1.3.0"; sha256="1vm4bxvvwlx1qmnss4zkbh7i29yy95macd79hrf78c7sfc8zkiqn"; depends=[]; }; + REBayes = derive2 { name="REBayes"; version="0.73"; sha256="0fv9ij71r36s6qsd0jrzcdirskvmr1bmxp1gbfvy77qm4dzxg00g"; depends=[Matrix reliaR Rmosek]; }; + RECA = derive2 { name="RECA"; version="1.3"; sha256="1v9ff2inxwpq91pjl6g9bpl9nmlyryp030g6abydikkhkcq3n74b"; depends=[]; }; + REDCapR = derive2 { name="REDCapR"; version="0.9.7"; sha256="0b2dbmmjd4bmr48inv1gwc9353p4rhf8891mb5rs4cdqsl13dic4"; depends=[data_table dplyr httr readr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; - REPPlab = derive2 { name="REPPlab"; version="0.9.3"; sha256="1ildcmqpjxbmrjjvgq0wyg8gj9a8fl54fyxbsbkfxfg6lyfknm2g"; depends=[lattice LDRTools rJava]; }; + REPPlab = derive2 { name="REPPlab"; version="0.9.4"; sha256="1pf8zrjdzziyq2lw31p1ij7cn4j7pf659ygxv8wpfnmcmpaqbc45"; depends=[lattice LDRTools rJava]; }; + REPTILE = derive2 { name="REPTILE"; version="1.0"; sha256="11swy4jrmmb0xjjxm1wyxd628fxxcqnialvijdrjwjpdbvraz4gq"; depends=[doParallel flux foreach optparse randomForest]; }; REQS = derive2 { name="REQS"; version="0.8-12"; sha256="049glqhc8h8gf425kmj92jv70917dsigpm37diby0c6hb4jrg8ka"; depends=[gtools]; }; + REREFACT = derive2 { name="REREFACT"; version="1.0"; sha256="0nggva4qfqlcs58df3sgiigw0z75l5kg8c1yh0k5qsvjnhiq19vn"; depends=[combinat gdata Matrix psych]; }; RESS = derive2 { name="RESS"; version="1.3"; sha256="1vddmifp47ia0sk35rnjpvw6gr9ygygafqczq268h17i1qs6ar22"; depends=[]; }; REST = derive2 { name="REST"; version="1.0.1"; sha256="16v89z7p9qkg7bsypf9vkrnbmb2n7gw3fqnfzbyxwj496wzxdv1x"; depends=[Rcmdr]; }; REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; }; - REndo = derive2 { name="REndo"; version="1.0"; sha256="0mla336jj1c17b2jvi4a10pgk5zpdhiif5f1c70pdhzvisiagmng"; depends=[AER e1071 mvtnorm optimx]; }; + REndo = derive2 { name="REndo"; version="1.1"; sha256="1n168xxjxj9353chdgsj88as0dj7ylm207xk75rbfzv7bdi7rlj9"; depends=[AER corpcor e1071 gmm lme4 lmtest Matrix mvtnorm optimx plyr sandwich]; }; RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; }; RFLPtools = derive2 { name="RFLPtools"; version="1.6"; sha256="1hl2crg7jl266zac41xvx151h7kl52346wnlvd8hba64s4s4apay"; depends=[RColorBrewer]; }; RFOC = derive2 { name="RFOC"; version="3.3-3"; sha256="101d7nf4zjni5kdk54w3afdaqnjzl7y90zygybkqpd0vi82q602b"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; + RFc = derive2 { name="RFc"; version="0.1-2"; sha256="0zqnx9hbwp6j4y4r6mndgm95px07if93mpdmp3ls5kh4pnj2n6ff"; depends=[httr jsonlite sp]; }; RFgroove = derive2 { name="RFgroove"; version="1.1"; sha256="1ank7jvmn83w0xzylf7i0fjb60mbrzzydspksfzcy16rkl6f5dvb"; depends=[fda randomForest wmtsa]; }; RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; }; + RFinfer = derive2 { name="RFinfer"; version="0.2.0"; sha256="1cgdrg7gm8hdaaycipn8wjx7s4652jyy664n1my9qynmc56qib4n"; depends=[Matrix party pbapply randomForest]; }; RFmarkerDetector = derive2 { name="RFmarkerDetector"; version="1.0.1"; sha256="1zd0sbcji620pka5600ilj4bq9gzdnk5kf82qfd5k5dcx7q9x7rk"; depends=[AUCRF ggplot2 randomForest ROCR UsingR WilcoxCV]; }; - RForcecom = derive2 { name="RForcecom"; version="0.8"; sha256="1w3m6rdmycrjhigs4h9bqy5xqsjwkz2cb1idch397iwxrjzsx1ph"; depends=[httr plyr RCurl XML]; }; - RFormatter = derive2 { name="RFormatter"; version="0.1.0"; sha256="01izxfnwhpy4wgp8ry0xasjjd63071gk1962dl2wzjycgcsig5p5"; depends=[formatR]; }; + RForcecom = derive2 { name="RForcecom"; version="1.1"; sha256="1ch1pwpnqagzb9n4qbgr804bmnz819kp36r5a4zhijmq8xpv3qr2"; depends=[httr plyr RCurl XML]; }; + RFormatter = derive2 { name="RFormatter"; version="0.1.1"; sha256="0jmzdc2cl4vvffsyfwp493fiygh9xinhv970qxp1667rw8wlap8l"; depends=[formatR]; }; RFreak = derive2 { name="RFreak"; version="0.3-0"; sha256="1dmllxb6yjkfkn34f07j2g7w5m63b5d10lh9xsmxyfk23b8l3x0x"; depends=[rJava]; }; - RGA = derive2 { name="RGA"; version="0.4.1"; sha256="1zwkxm1xwgfdd5r4jkgzrfj4hgrdnzz8z0a75318fbpaw1cvaqwq"; depends=[httr jsonlite lubridate plyr]; }; - RGCCA = derive2 { name="RGCCA"; version="2.0"; sha256="0mcp51z5jkn7yxmspp5cvmmvq0cwh7hj66g7wjmxsi74dwxcinvg"; depends=[MASS]; }; - RGENERATE = derive2 { name="RGENERATE"; version="1.3"; sha256="16gkdwbigdsdvnplqhzs11kk4dhb2rlnf7vj6kbzxw9fb1b7818q"; depends=[RMAWGEN]; }; - RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.0"; sha256="1f6y3i8r6a9cajbj127s0cd13ihbi8scgrsgizza1fjb7fg2g450"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; + RGA = derive2 { name="RGA"; version="0.4.2"; sha256="0pjizgvrh0gbjlyxlb3v93nhigg8rpq3mziv1qlp6r0s5y7cmpi9"; depends=[httr jsonlite lubridate plyr]; }; + RGBM = derive2 { name="RGBM"; version="1.0-4"; sha256="0z4qkwmkwf3r9lpfk5dgrphzb493wqrl7mrh58hyiz09dsy224h1"; depends=[doParallel foreach plyr]; }; + RGCCA = derive2 { name="RGCCA"; version="2.1"; sha256="1xpni9aj37zhpjr6k6gc82dihmzjdxjqy5dyz7lcvscgbwvbw0vl"; depends=[MASS]; }; + RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; + RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGenetics = derive2 { name="RGenetics"; version="0.1"; sha256="0x5sspd67hh08qm62whlnnd838m0np29q3bfzgwp6j85lhil3jrx"; depends=[]; }; RGoogleAnalytics = derive2 { name="RGoogleAnalytics"; version="0.1.1"; sha256="1049fyxl00izw92rm508p90asjp0agmv38b00yfbmasfzsp1r00s"; depends=[httr lubridate]; }; RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; }; + RGoogleFit = derive2 { name="RGoogleFit"; version="0.2.0"; sha256="1yxp2dflq4hihn8mknjxhsrf3dy4dr4bs4qkzi2zxm2mh9mn0lsl"; depends=[bit64 httr jsonlite RCurl]; }; RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; }; RGtk2 = derive2 { name="RGtk2"; version="2.20.31"; sha256="1ilnlmsk9fis61pc5bn9sf7z4b7vc7f0a0zcy77kk4bns6iqjvyp"; depends=[]; }; RGtk2Extras = derive2 { name="RGtk2Extras"; version="0.6.1"; sha256="19gjz2bk9dix06wrmlnq02yj1ly8pzhvr0riz9b08vbzlsv9gnk2"; depends=[RGtk2]; }; RH2 = derive2 { name="RH2"; version="0.2.3"; sha256="1qbxy600fc8k2xl70liggdgg03ga6a8yad001banqzdmh508wcxl"; depends=[chron rJava RJDBC]; }; - RHRV = derive2 { name="RHRV"; version="4.0"; sha256="16xmmmw8gsqalbqf59xwpkd2bkfwxrdx8bwdn875bizx7mn0bql7"; depends=[nonlinearTseries tkrplot waveslim]; }; + RHRV = derive2 { name="RHRV"; version="4.2.3"; sha256="09rcf9da04195myh4mwva3hqcd483k0wwcn84jgbkj8a5z1zxqc6"; depends=[lomb nonlinearTseries tkrplot waveslim]; }; RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; - RI2by2 = derive2 { name="RI2by2"; version="1.2"; sha256="0387ncq1nhpz8521nwsjybsdpncm56nrwkz68apgihmrbjlmp6m7"; depends=[gtools]; }; + RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; - RISmed = derive2 { name="RISmed"; version="2.1.5"; sha256="03c2b6iqq147kwrpx6wh440y1p2sy5c4i3v2yph99326pzxbyw7q"; depends=[]; }; + RISmed = derive2 { name="RISmed"; version="2.1.6"; sha256="0gwdx2xg3n4n82cvhj61yvdlmd35ag85dglwfcwhbplk7zh4cjps"; depends=[]; }; RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; RImpala = derive2 { name="RImpala"; version="0.1.6"; sha256="03f4cq4bcrydpy78ypir7smj7abrcfynz0zzlgwgc60vh7vl79lz"; depends=[rJava]; }; RInSp = derive2 { name="RInSp"; version="1.2"; sha256="0zg46qw44wx17ydcz592gl4k9qq08dycmsshxxqkjf92r3g3l6wm"; depends=[]; }; RInside = derive2 { name="RInside"; version="0.2.13"; sha256="0cfhljdai9kkw5m01mjaya0s02g4g1cy1g4i0qpjkhgqyihsh7dy"; depends=[Rcpp]; }; - RItools = derive2 { name="RItools"; version="0.1-13"; sha256="1j7gwn1n3dn3xp0c9rwdlmkkw8arjvf9nq0glwc273nnyh4wg72k"; depends=[abind SparseM svd xtable]; }; + RItools = derive2 { name="RItools"; version="0.1-15"; sha256="0f7g0w8bnbxryll48rnn7blgskgcdqqx9xv4fqmwcbkbasjz37va"; depends=[abind SparseM survival svd xtable]; }; RJDBC = derive2 { name="RJDBC"; version="0.2-5"; sha256="0cdqil9g4w5mfpwq85pdq4vpd662nmw4hr7qkq6510gk4l375ab2"; depends=[DBI rJava]; }; - RJSDMX = derive2 { name="RJSDMX"; version="1.5"; sha256="1dps81ni257j27dsfwpjz20r2q3q60myf29cdjphsmf7zwkrzpiz"; depends=[rJava zoo]; }; + RJSDMX = derive2 { name="RJSDMX"; version="1.6-2"; sha256="0015r71fh2ynwvq4lzdq1h59kvsr04h82anznwz5ixrc3vz3abzj"; depends=[rJava zoo]; }; RJSONIO = derive2 { name="RJSONIO"; version="1.3-0"; sha256="1dwgyiy19sixhy6yclqcaaxswbmpq7digyjjxhy1qv0wfsvk94qi"; depends=[]; }; RJaCGH = derive2 { name="RJaCGH"; version="2.0.4"; sha256="1a8nd0w73dvxpamzi2addwr6q3rxhnnpa1girnlwbd1j1dll0bz6"; depends=[]; }; RJafroc = derive2 { name="RJafroc"; version="0.1.1"; sha256="1630f8nmpid5pax8gqxych8bqf8a1avgrk7yqisk3lf1yx3h68rq"; depends=[ggplot2 shiny stringr xlsx]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-1"; sha256="00bva6ksdnmwa0i2zvr36n40xp429c0sqyp20a8n3zsblawiralc"; depends=[rJava]; }; - RKEEL = derive2 { name="RKEEL"; version="1.1.6"; sha256="11yc31jswdzm5kr7j9b2cpzd9rhwkirfk02df7z5i8ry420jhm5y"; depends=[doParallel foreach gdata R6 RKEELdata RKEELjars XML]; }; - RKEELdata = derive2 { name="RKEELdata"; version="1.0.2"; sha256="0wnzsf5mgal5cqdclfs1z396h47a7ikkf5raby8508yrv19czv5l"; depends=[]; }; - RKEELjars = derive2 { name="RKEELjars"; version="1.0.11"; sha256="0kmdzvybj8jyiq95clc52jzrnmwk5ifanjjpz3bw4ypvqmj86xn2"; depends=[downloader]; }; + RKEEL = derive2 { name="RKEEL"; version="1.1.21"; sha256="0rcbw4wbp1dg4hqrg6dmim7d4bsaa1j3rdffhkyz3in8hv76i0lq"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; + RKEELdata = derive2 { name="RKEELdata"; version="1.0.3"; sha256="1imz5qsr04hkhblivax30jlvbvjxya6h0z9x7s0llgqssfxbawpy"; depends=[]; }; + RKEELjars = derive2 { name="RKEELjars"; version="1.0.15"; sha256="06wc4x6lhk9akaghqi5bfkfs3yxg29lbga074a5nwadiz2fbnmkv"; depends=[downloader]; }; RKlout = derive2 { name="RKlout"; version="1.0"; sha256="17mx099393b1m9dl3l5xjcpzmb9n3cpjghb90m9nidccxkhacmqf"; depends=[RCurl]; }; - RLRsim = derive2 { name="RLRsim"; version="3.1-2"; sha256="0wwcn9ch4bndrw5sizsd4cqaq1nvqgykx28dzp05r6wsabixnhxh"; depends=[lme4 mgcv nlme Rcpp]; }; + RLRsim = derive2 { name="RLRsim"; version="3.1-3"; sha256="1r0xqay3jfg435dh9fqc6yy73wjffp658da194rx63vpfhshgz8w"; depends=[lme4 mgcv nlme Rcpp]; }; RLogicalOps = derive2 { name="RLogicalOps"; version="0.1"; sha256="1qyn80x3x3bb5wgzyzw6pxs8a6q26yq1fkmkz7f5wywsnrj8hzfj"; depends=[rstackdeque stringr]; }; - RLumShiny = derive2 { name="RLumShiny"; version="0.1.0"; sha256="0j4w3h1j6dm5q98639am3xfixjdx2xhiiy3qghkb0z8lv5rbvvw5"; depends=[digest googleVis Luminescence RCurl shiny]; }; + RLumModel = derive2 { name="RLumModel"; version="0.2.0"; sha256="164bg9smxllwwk93g3g08v3902p5bl0i278dyal71cxycayzc8y1"; depends=[deSolve Luminescence Rcpp RcppArmadillo]; }; + RLumShiny = derive2 { name="RLumShiny"; version="0.1.1"; sha256="0wrn1lmwzigaq1w3a04mrz6ikgw2whr36718ckixphm5kcqlcnjr"; depends=[googleVis Luminescence shiny]; }; + RM_weights = derive2 { name="RM.weights"; version="1.0"; sha256="0757p4174j913k8xh90zg6fpxh25b9415zap1i7ym9ab78kn0k3i"; depends=[Hmisc psychotools]; }; RM2 = derive2 { name="RM2"; version="0.0"; sha256="1v57nhwg8jrpv4zi22fhrphw0p0haynq13pg9k992sb0c72dx70a"; depends=[msm]; }; - RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.0"; sha256="19p8bxcfk802pdn6990ya0bd9ghbvg8vmk3z01x1v76w09j4bv38"; depends=[chron date vars]; }; + RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.3"; sha256="0spc0vszbxfpfp3kqdj0gnb90nvn50qwalq3mw8151b8h1swmf3l"; depends=[chron date vars]; }; RMC = derive2 { name="RMC"; version="0.2"; sha256="1sc4nsjmaw2ajm8bka7r4mf73zxqhnvx23kl4v20pfpy9rhgd0h6"; depends=[]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; RMOA = derive2 { name="RMOA"; version="1.0"; sha256="01mrl6544wv2jc8b8gk1whs865sbv4id5sywnf1hq3r7g8wgs8lp"; depends=[rJava RMOAjars]; }; RMOAjars = derive2 { name="RMOAjars"; version="1.0"; sha256="0k3w37dwyyvfxh7a9l76cyjm27qq1clxppc5h16li2m8x68fvpjq"; depends=[rJava]; }; RMRAINGEN = derive2 { name="RMRAINGEN"; version="1.0"; sha256="175kd803a44yblq2jw5mrn2qv4piiy249577lf684bmmajf4ird4"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN]; }; + RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; }; - RMark = derive2 { name="RMark"; version="2.1.14"; sha256="15j50i05y8zpdawpk0x7ndhxwfcmxk3xajhh6lxzf81q1zg92hvd"; depends=[coda matrixcalc msm snowfall]; }; + RMark = derive2 { name="RMark"; version="2.2.2"; sha256="10qinncbvfkc1n6w5i4pc7zr4llc6jskq6p2m5783chxwrwzyjlj"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; - RMixpanel = derive2 { name="RMixpanel"; version="0.2-1"; sha256="196z6qvcsh8xvpjaiif4l4h0xkmjgz8q35v5pqky9dc856v0cl9a"; depends=[digest jsonlite RCurl uuid]; }; + RMixpanel = derive2 { name="RMixpanel"; version="0.6-2"; sha256="09z00ryyk3jx1s7p2d1rzvg84qhybv58d1n3cvjcmj07bv1h2dj1"; depends=[jsonlite RCurl uuid]; }; RMongo = derive2 { name="RMongo"; version="0.0.25"; sha256="1anybw64bcipwsjc880ywzj0mxkgcj6q0aszdad6zd4zlbm444pc"; depends=[rJava]; }; - RMySQL = derive2 { name="RMySQL"; version="0.10.8"; sha256="1czy9ahsmh13djapcllh7dx93sfpz8hcfx5yzbnmwymhw5svkk96"; depends=[DBI]; }; + RMySQL = derive2 { name="RMySQL"; version="0.10.9"; sha256="0hpxjvr6yh2093ci7dwrww8wv9zhclfjk3wbx86jxvn87ms9qa21"; depends=[DBI]; }; RNCBIEUtilsLibs = derive2 { name="RNCBIEUtilsLibs"; version="0.9"; sha256="1h1ywx8wxy6n2rbpmjbqw4c0djz29pbncisd0mlbshj1fw226jba"; depends=[rJava]; }; - RNCEP = derive2 { name="RNCEP"; version="1.0.7"; sha256="0yvddsdpdrsg2dafmba081q4a34q15d7g2z5zr4qnzqb8wjwh6q2"; depends=[abind fields fossil maps RColorBrewer sp tgp]; }; - RND = derive2 { name="RND"; version="1.1"; sha256="1rbnjkfrsvm68xp90l4awixbvpid9nxnhg6i6fndpdmqwly2fwdp"; depends=[]; }; + RNCEP = derive2 { name="RNCEP"; version="1.0.8"; sha256="0nkx33997c5rgc3ch5a2bb6rrw5xw1y71rliygw5k1ldi335rsm7"; depends=[abind fields fossil maps RColorBrewer sp tgp]; }; + RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; }; + RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; - RNeXML = derive2 { name="RNeXML"; version="2.0.6"; sha256="1ya628lhb6jidfwvl7dddsy9ww761zwznmg1m0snfqwggxc83y8g"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr taxize tidyr uuid XML]; }; - RNeo4j = derive2 { name="RNeo4j"; version="1.6.3"; sha256="16lkick2swi60pbx1wy869286irv39xb4di5a2vlvbsqjdl0lnrc"; depends=[httr RJSONIO rstudioapi]; }; + RNeXML = derive2 { name="RNeXML"; version="2.0.7"; sha256="1q6ifqkypdj4hmm0f4mhwq8pidg4ba52c7k68527dk9rsrmiyjr6"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr taxize tidyr uuid XML]; }; + RNeo4j = derive2 { name="RNeo4j"; version="1.6.4"; sha256="197ykvcfw1160ir6m568a4ksszyv5vlis2r0aygi155iz04j0bwm"; depends=[httr jsonlite rstudioapi]; }; RNetCDF = derive2 { name="RNetCDF"; version="1.8-2"; sha256="0pn45z1bj777nkfglvwwhpji8vz39sd51yszfa5g6rqxiw1a7y5d"; depends=[]; }; - RNetLogo = derive2 { name="RNetLogo"; version="1.0-2"; sha256="1j0f14n91gks288sph40ki9wr21dg0bsdk9143f1wwhmwr3jm4wi"; depends=[igraph rJava]; }; - RNewsflow = derive2 { name="RNewsflow"; version="1.0"; sha256="1lh9mnv1nvmpx8pqa3bqrv3zc2079hqzajdg73fbq5lfhdpb0rb3"; depends=[data_table igraph Matrix plyr scales slam tm wordcloud]; }; - RNiftyReg = derive2 { name="RNiftyReg"; version="2.2.0"; sha256="0mik24n3qp8j8iy88ss642rgll7rrhxyyc86zh40b6n8y9qc37wq"; depends=[ore Rcpp RcppEigen]; }; + RNetLogo = derive2 { name="RNetLogo"; version="1.0-3"; sha256="0aanp982c5xy4w4jsdcb9bmk1vyns055ad39hp206zaw3wj6vj3d"; depends=[igraph rJava]; }; + RNewsflow = derive2 { name="RNewsflow"; version="1.0.1"; sha256="1vxzcsiapnq8101iq4w73m9k8cq2khgcsxak71x72n295r7qpsd6"; depends=[data_table igraph Matrix plyr scales slam tm wordcloud]; }; + RNifti = derive2 { name="RNifti"; version="0.4.0"; sha256="1gj63rhzzrlxhwcwmn5jmq512zy08zhrbibh7w7xk0fzd6j0lkra"; depends=[Rcpp]; }; + RNiftyReg = derive2 { name="RNiftyReg"; version="2.5.0"; sha256="10ksakp62d1qhl1r8lk0k9f6ng9wfli3lhyd14bxigv625429isa"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROC632 = derive2 { name="ROC632"; version="0.6"; sha256="0vgv4rclvb79mfj1phs2hmxhwchpc5rj43hvsj6bp7wv8cahfg5g"; depends=[penalized survival survivalROC]; }; ROCR = derive2 { name="ROCR"; version="1.0-7"; sha256="1jay8cm7lgq56i967vm5c2hgaxqkphfpip0gn941li3yhh7p3vz7"; depends=[gplots]; }; - ROCS = derive2 { name="ROCS"; version="1.2"; sha256="1liph11p5dwvm1z5vq7ph5pizzqrm6ami94cq6y5kvm2qyv0jfah"; depends=[rgl]; }; - ROCt = derive2 { name="ROCt"; version="0.9.4"; sha256="16kcq9dckwmn98izhnyzj9pcqb1ifs6b1hrx126gwb0zp3wdr8ym"; depends=[date relsurv survival timereg]; }; + ROCS = derive2 { name="ROCS"; version="1.3"; sha256="11vdf8701ap6ya7c7kx9jhvg7qfc6vkij3jridna6f4xj384grki"; depends=[poibin rgl]; }; + ROCt = derive2 { name="ROCt"; version="0.9.5"; sha256="0f7day0rv62ggm1nc7qkh45r6svr84mdk7xxpdf09pi4lbdx0rm6"; depends=[date relsurv survival timereg]; }; ROCwoGS = derive2 { name="ROCwoGS"; version="1.0"; sha256="029nramxwhzqim315g1vkg1zsszzkic28w6ahwg9n7bk9d08adzk"; depends=[]; }; - RODBC = derive2 { name="RODBC"; version="1.3-12"; sha256="042m7bwjhlzpq2hgzsq0zy4ri3s8ngw3w4qrqh1ag7fprpn55flj"; depends=[]; }; + RODBC = derive2 { name="RODBC"; version="1.3-14"; sha256="12zjyhfclxj7k9lxhdlwxqh7ckmh916hh3ywmhzbvzvxvzymnkgd"; depends=[]; }; RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; }; - RODBCext = derive2 { name="RODBCext"; version="0.2.5"; sha256="18a0ajqrq3rcfcsyz0c9mwq6bi03prpg83z9jasbbc866gqs6fvq"; depends=[RODBC]; }; + RODBCext = derive2 { name="RODBCext"; version="0.2.7"; sha256="0lklafxhs9s5gwd0jd7jmz7inalxc6967vl4r2faq7d07zxmsyd8"; depends=[RODBC]; }; RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; }; - ROI = derive2 { name="ROI"; version="0.1-0"; sha256="01za8cxjf721m2lxnw352k8g32pglmllk50l7b8yhjwc49k8rl66"; depends=[registry slam]; }; - ROI_plugin_glpk = derive2 { name="ROI.plugin.glpk"; version="0.0-2"; sha256="10p3cq59app3xdv8dvqr24m937a36lzd274mdl2a9r4fwny2rssa"; depends=[Rglpk ROI]; }; - ROI_plugin_quadprog = derive2 { name="ROI.plugin.quadprog"; version="0.0-2"; sha256="0mkjq87rv1xf0bggpqd2r4gabv11spgcds2y94r3vpmh8krf71jf"; depends=[quadprog ROI slam]; }; - ROI_plugin_symphony = derive2 { name="ROI.plugin.symphony"; version="0.0-2"; sha256="1z4cahz0h38jw54p9363ca6i3qq7dwlm3568dr91gvpqf76b05wd"; depends=[ROI Rsymphony slam]; }; + ROI = derive2 { name="ROI"; version="0.2-1"; sha256="1g1qhrr62a74a8h73b75zxa5msbq5gv4cp1gmm0ihrjzzfzinvap"; depends=[registry slam]; }; + ROI_models_netlib = derive2 { name="ROI.models.netlib"; version="1.0"; sha256="13ai7zkd00a03vyzfy1sm64cx8328xzwz5v8yw0shkdz5rchaq2d"; depends=[ROI]; }; + ROI_plugin_cplex = derive2 { name="ROI.plugin.cplex"; version="0.2-1"; sha256="0ik4mmpd5x5233pdp88w8g605fg6lh4yvzlb9ndqxfnmv2nchgwl"; depends=[Rcplex ROI slam]; }; + ROI_plugin_ecos = derive2 { name="ROI.plugin.ecos"; version="0.2-4"; sha256="0lzxz9zs68y2pkkkfa8vgi4jiswbbh128idddfz3hqak5j1gg3rh"; depends=[ECOSolveR Matrix ROI slam]; }; + ROI_plugin_glpk = derive2 { name="ROI.plugin.glpk"; version="0.2-1"; sha256="01y66ir5s8spv4l8qz974wfkslxkqznzlc8padgrqm8vd9wli8k2"; depends=[Rglpk ROI]; }; + ROI_plugin_ipop = derive2 { name="ROI.plugin.ipop"; version="0.2-1"; sha256="1v6imxx9215f7hlqzscppyl7n9f9811rx58dia0h5ydfnhv4alxd"; depends=[kernlab ROI slam]; }; + ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.0-1"; sha256="0k0308sgkac7z0d01sc9xcrd9pxjfb78gns4rp9mrxkz4k9yvm3h"; depends=[lpSolveAPI ROI]; }; + ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.2-4"; sha256="1fyzpbljhkc15gmmsvr37hsmfr7fp7ffp9xylsnvy4zxlw060knp"; depends=[nloptr ROI]; }; + ROI_plugin_quadprog = derive2 { name="ROI.plugin.quadprog"; version="0.2-1"; sha256="0cb23xb56j0qn3v7zgqni1697s8bg256zr7dqm00i65f4zivws0j"; depends=[quadprog ROI slam]; }; + ROI_plugin_scs = derive2 { name="ROI.plugin.scs"; version="0.2-3"; sha256="1z039cnv75nk81b4qp1zwy09gvksaxlnxwgdg30mgzjd2mxcp5cf"; depends=[Matrix ROI scs slam]; }; + ROI_plugin_symphony = derive2 { name="ROI.plugin.symphony"; version="0.2-1"; sha256="0qvyindwcqiafq8k4m9plipdn5qrpycjk6mv90nmw644pnmip77l"; depends=[ROI Rsymphony slam]; }; ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; }; ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; - RObsDat = derive2 { name="RObsDat"; version="15.08"; sha256="0n64jqba682rdy696yfpi5l5sw6g33421hg1rnb1dwdnvr7yd0y9"; depends=[DBI e1071 sp spacetime vwr xts zoo]; }; + RObsDat = derive2 { name="RObsDat"; version="16.03"; sha256="06d4svg4crgscn3wyg1fi8v46wlhlrgdrbfiv8ak4a5k5z0gws94"; depends=[DBI e1071 sp spacetime vwr xts zoo]; }; + ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; - ROptEst = derive2 { name="ROptEst"; version="0.9"; sha256="0m5czyqcsz42dzrhm3vwfmn046n57cb7x5sqzf2nad1gqgxzxp1d"; depends=[distr distrEx distrMod RandVar RobAStBase]; }; + ROptEst = derive2 { name="ROptEst"; version="1.0"; sha256="1hq21rc9ydkgxv54a0zfrlncy4798rjvfmyqx2p88j0swaipy6wp"; depends=[distr distrEx distrMod RandVar RobAStBase startupmsg]; }; ROptEstOld = derive2 { name="ROptEstOld"; version="0.9.2"; sha256="0blf34xff9pjfy983xm7a27xqkh9173nk64ysas6f0g4h31gh8ax"; depends=[distr distrEx evd RandVar]; }; ROptRegTS = derive2 { name="ROptRegTS"; version="0.9.1"; sha256="1a8pbn63wh2w2n409yzbwvarvhphcn82rdqjh407ch3k3x6jz3r5"; depends=[distr distrEx RandVar ROptEstOld]; }; ROptimizely = derive2 { name="ROptimizely"; version="0.2.0"; sha256="059zfn6y687h989wryvpqwgnp9njrrr4ys0gf1ql4pw85b2c50dy"; depends=[httr jsonlite]; }; - ROracle = derive2 { name="ROracle"; version="1.2-2"; sha256="07ai4hmb9gjpx38l1jcdqlynpl5745m97lxvglrga6sv1z6q9cyb"; depends=[DBI]; }; - RPANDA = derive2 { name="RPANDA"; version="1.1"; sha256="1sjzph00rxilgk4vxiklfdn6ji2f9b5jz7hd83pcsdinrwy6pjxg"; depends=[ape cluster deSolve fpc igraph picante pspline pvclust TESS]; }; + ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; + RPANDA = derive2 { name="RPANDA"; version="1.2"; sha256="0zp4zwh5gkywswrribyillgjvrp8hgbdn22c4iyl406wvbaiyy7y"; depends=[ape cluster corpcor deSolve fpc igraph phytools picante pspline pvclust TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; - RPEnsemble = derive2 { name="RPEnsemble"; version="0.2"; sha256="1kbgpbk7gma0vhl0aybdj7bk2chhbggzh7h1w7snddgdvvj6cz10"; depends=[class MASS]; }; + RPEnsemble = derive2 { name="RPEnsemble"; version="0.3"; sha256="052c9cnsrjxbk2yxj08psy3nw0mq3mdr75fhnxpz64n4cqzxbr2q"; depends=[class distr MASS]; }; RPMG = derive2 { name="RPMG"; version="2.2-1"; sha256="03gqam7lp6ycrwm30gdwh2irqkcviwzk74ysyxff7b23ng4jkz1j"; depends=[]; }; RPMM = derive2 { name="RPMM"; version="1.20"; sha256="09rwrcd8jz0nii1vx0n3b4daidiq0kp0vf88bvi84y4i06743il7"; depends=[cluster]; }; RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; }; RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.3"; sha256="0qgvr671zir8d1q5rzdy0gkljsfr7bz1aj47xpkbbpkjr5hqgihj"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; - RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.4"; sha256="0gpmbpiaiqvjzyl84l2l8v2jnz3h41v8jl99sp1qvvyrjrickra2"; depends=[DBI]; }; - RPresto = derive2 { name="RPresto"; version="1.2.0"; sha256="0dv7yqxy0pj85dbpr1l6lh33rmmxw5g3fy7g3bvraaif3h3f1pv0"; depends=[DBI httr jsonlite RCurl stringi]; }; - RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.3"; sha256="00sik2ri64bvvhrdpb91myrhzwwk3y67m214mi21q3b8710mmcaf"; depends=[Rcpp RCurl]; }; + RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.4-1"; sha256="0ydz206ir797rv435if3653fnnyihgmhr5d0n4zhlrs1m1zy74k2"; depends=[DBI]; }; + RPresto = derive2 { name="RPresto"; version="1.2.1"; sha256="1lka1p4wh1vl9bpg2q4yv72jcd6jjp09330mw68ph27jqhfzinmm"; depends=[DBI httr jsonlite RCurl stringi]; }; + RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.8"; sha256="11z0ka5zlg6kglnm4ix4rfw2wakps6js11fzx762f78945g14r1s"; depends=[Rcpp RCurl]; }; + RPtests = derive2 { name="RPtests"; version="0.1.3"; sha256="0gprbd4m889kaklvc7ljbsl8m7l02pkfrdrzs84d92lgphg0wv9n"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; - RPushbullet = derive2 { name="RPushbullet"; version="0.2.0"; sha256="1h9yvw9kw7df0ijwhfc2bi29y61fl9zg3mp4xygx3fyr9mycjm7a"; depends=[RJSONIO]; }; - RQDA = derive2 { name="RQDA"; version="0.2-7"; sha256="05h2f5sk0a14bhzqng5xp87li24b6n11p5lcxf9xpy7sbmh5ig6g"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; - RQuantLib = derive2 { name="RQuantLib"; version="0.4.2"; sha256="1sj77iw712jp3rcpmyw3b4x1sfsw7qmb56dbl13vwcxnh5jqs1is"; depends=[Rcpp]; }; - RRF = derive2 { name="RRF"; version="1.6"; sha256="1gp224mracrz53vnxwfvd7bln18v8x7w130wslhfgcdl0n4f2d28"; depends=[]; }; + RPushbullet = derive2 { name="RPushbullet"; version="0.3.1"; sha256="15cb1zlfnjaf5z4dqx3xrkbkja152ah7jhs21qhvfl20qz4cyh7r"; depends=[curl jsonlite]; }; + RQDA = derive2 { name="RQDA"; version="0.2-8"; sha256="103mb69x70z1i7z66b2if6zycr5iwcz1p3g8vvz0npmxncr4las9"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; + RQGIS = derive2 { name="RQGIS"; version="0.2.0"; sha256="1c160nd33qncp7cjzx6dw3b1scx90czak8wqgf73jn903zynn2m4"; depends=[raster RCurl rgdal sp XML]; }; + RQuantLib = derive2 { name="RQuantLib"; version="0.4.3"; sha256="1c0ilkrgkyf5x31c51rkszm4bnscyv7hy101dlk0cqkjril7mp7m"; depends=[Rcpp zoo]; }; + RRF = derive2 { name="RRF"; version="1.7"; sha256="1nxwqb0ybia8cglqlrbwnm9xzab6ayrn5f3j3l0kqszq1rvkfw95"; depends=[]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; + RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; + RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; RRreg = derive2 { name="RRreg"; version="0.6.1"; sha256="1vf40xcg39hh9wz6hjfr2p10pzpbs4b6x5hmsf1njajcf6yfl09q"; depends=[doParallel foreach lme4]; }; RSA = derive2 { name="RSA"; version="0.9.10"; sha256="0m9gd1h9ghj6gfwixwy8hhc2625f9mi473zp55zdl5w2q10qk3ij"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer tkrplot]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="0.94-5"; sha256="0lbvy1p6wcxnn70149wcpmfy2ijk6g37ka452dxm0w0zpg0zga1w"; depends=[gstat plyr shapefiles]; }; RSAP = derive2 { name="RSAP"; version="0.9"; sha256="1sxirfabhpmfm0yiiazc9h1db70hqwva2is1dql6sjfanpl8qanl"; depends=[reshape yaml]; }; + RSAgeo = derive2 { name="RSAgeo"; version="1.2"; sha256="1lgxcf5sd7aqk213s70mvi0kc4prm1w97m4wf3xjnvs7yc7mb5yz"; depends=[]; }; + RSCABS = derive2 { name="RSCABS"; version="0.9.01"; sha256="1zx2272381i24hdpb1dks3l7szds9i0rl119ljxh9f61z4fbkrhp"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; }; RSDA = derive2 { name="RSDA"; version="1.3"; sha256="0f2f6bn11p43sv8zmvqpf5w1rdisf7b2dvllhiy3pg9f6r1mc85k"; depends=[abind FactoMineR ggplot2 glmnet princurve RJSONIO scales scatterplot3d sqldf XML]; }; - RSEIS = derive2 { name="RSEIS"; version="3.5-2"; sha256="1mm4l6yymd564ahc189iaanw8j51jxdfpiif47zf4603irl1bglp"; depends=[RPMG Rwave]; }; + RSEIS = derive2 { name="RSEIS"; version="3.6-8"; sha256="1jhxd1aq85abll5vrdbbyz52ch8xyaxzqf5r2nzvnc6953hv6jnf"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.1.2"; sha256="0b2v17p3a3sy8jc4vy0nq65sdkxyf0b8sf5f78yvdcn5knydah6c"; depends=[]; }; - RSKC = derive2 { name="RSKC"; version="2.4.1"; sha256="1dvzxf001a9dg71l4bh8z3aia7mymqy800268qf7qzy9n6552g59"; depends=[flexclust]; }; + RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; }; + RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; }; RSMET = derive2 { name="RSMET"; version="1.2.9"; sha256="1da7kck5g0vcd1ly7xaa1i8d9b1qjf6kwf35sq5d71hfbgx2fb4k"; depends=[stringr]; }; - RSNNS = derive2 { name="RSNNS"; version="0.4-7"; sha256="15293a6lrihk407spv2ndpcf0r9xm5l8ggc1sagf5r2mvbfiv57c"; depends=[Rcpp]; }; - RSNPset = derive2 { name="RSNPset"; version="0.5"; sha256="0jkibpimh61n869r260qilkacq64awcjgpz46wvqadxw330a3p8c"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; + RSNNS = derive2 { name="RSNNS"; version="0.4-9"; sha256="08f2yyyc42jxqwyhvwakjkyillkc23chnk2b3bfzyxnb4pphbdfl"; depends=[Rcpp]; }; + RSNPset = derive2 { name="RSNPset"; version="0.5.2"; sha256="11w2r1gfnzhqa5pwgy8nfs9s6lmln3cwkxxkid8fdg4b3ndwfl46"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; - RSQLServer = derive2 { name="RSQLServer"; version="0.2.0"; sha256="1lxk4qw8kl0v7fjl9836arjyvqwwrmph5wyhcmmzg1i6ldn0rd7f"; depends=[assertthat DBI dplyr lubridate rJava RJDBC yaml]; }; - RSQLite = derive2 { name="RSQLite"; version="1.0.0"; sha256="08b1syv8z887gxiw8i09dpqh0zisfb6ihq6qqr01zipvkahzq34f"; depends=[DBI]; }; - RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-4"; sha256="1ybk5q4dhskrh7h1sy86ilchdwi6rivy3vv3lph6pms2virgm854"; depends=[]; }; + RSQLite = derive2 { name="RSQLite"; version="1.1-2"; sha256="0mg9yhdvny3vjn72agai5ghqxd3vk8cd4x1lsc0gzc2b2dm2w0p4"; depends=[BH DBI memoise plogr Rcpp]; }; + RSSL = derive2 { name="RSSL"; version="0.6.1"; sha256="03f0i0v0nygkcci42h4bh7jngxz15wsd78cn2zkzbrqadz1c61r5"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; + RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; + RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; + RSarules = derive2 { name="RSarules"; version="1.0"; sha256="0lrql4q45hyhqbix86ixl12mknnjbz3137gx2zkvqpz91bsk145j"; depends=[arules Matrix]; }; + RSauceLabs = derive2 { name="RSauceLabs"; version="0.1.6"; sha256="1p7hw6vnlg6w5ggmfpc3q3s6n1fikjkjnxzz97jifiy0zwn5dp9i"; depends=[data_table httr jsonlite whisker xml2]; }; RSclient = derive2 { name="RSclient"; version="0.7-3"; sha256="07mbw6mcin9ivsg313ycw2pi901x9vjpmi6q7sms1hml4yq50k6h"; depends=[]; }; - RSeed = derive2 { name="RSeed"; version="0.1.31"; sha256="0wljchzkp8800v9zcgjapkbildkb3p2xnkh1m6m7q6qqc9aw8mws"; depends=[graph RBGL sybil]; }; - RSelenium = derive2 { name="RSelenium"; version="1.3.5"; sha256="15pnmnljl4dm9gbcgnad5j58k6cgs6qm34829kdgyb0ygs9q7ya0"; depends=[caTools RCurl RJSONIO XML]; }; + RSeed = derive2 { name="RSeed"; version="0.1.60"; sha256="0rvb6w4z5c2wcdgx5w6vv7c8il8d0096pgv3fyvw21ag25z605jc"; depends=[graph RBGL sybil]; }; + RSelenium = derive2 { name="RSelenium"; version="1.7.1"; sha256="04ghck76jh7w6kgzdszkzjwj9fhyngq13mf9iybavxph5wcy7xgq"; depends=[binman caTools httr openssl wdman XML]; }; + RSentiment = derive2 { name="RSentiment"; version="2.1"; sha256="0gcmgnczqhz8vzwj8img32z95si1ywbg2mvfd3rwlxzxqdkxg98v"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.1-232"; sha256="0qp3bqq5p19bg47m37s2dw8m4q91hnkc2zxwhsgb076q0xvvv9xq"; depends=[Matrix]; }; - RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.7"; sha256="09g64ndfglpznjp39k4ry40rn7h6chjs3xfs9h3vh3wg7qy8q4vx"; depends=[base64enc digest httr jsonlite plyr stringr]; }; - RSocrata = derive2 { name="RSocrata"; version="1.7.0-14"; sha256="1nw3ga1ff1vsgfljmqdwcmxv9w04nldjrish2226l3r8632iy4am"; depends=[httr jsonlite mime]; }; - RSofia = derive2 { name="RSofia"; version="1.1"; sha256="0q931y9rcf6slb0s2lsxhgqrzy4yqwh8hb1124nxg0bjbxvjbihn"; depends=[Rcpp]; }; - RSpectra = derive2 { name="RSpectra"; version="0.11-0"; sha256="04r59jv0s7ji05d0q1yis8fljj7c5rj82sh7hhl8dfxzy4d6f8hb"; depends=[Matrix Rcpp RcppEigen]; }; + RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.10"; sha256="1wi2rv5wwibw8m0xd37f284b14irg2gnm31yz73c3wpic2sbf3wf"; depends=[base64enc digest httr jsonlite plyr stringr]; }; + RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.1"; sha256="1xxs5q25v3i0qf829xl8n90n2fx1anfgfrzvwzff4dm252y7b2gw"; depends=[RCurl]; }; + RSocrata = derive2 { name="RSocrata"; version="1.7.1-24"; sha256="19myaccxxa11b92zi0ra53b6n5dx0af8ymxymqpmg7hlr3v6n82x"; depends=[httr jsonlite mime plyr]; }; + RSpectra = derive2 { name="RSpectra"; version="0.12-0"; sha256="0aa33mhzj03gznpza5l5qj94s45imfhrgx52bsa8rq00f93fgaf0"; depends=[Matrix Rcpp RcppEigen]; }; RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; }; RStars = derive2 { name="RStars"; version="1.0"; sha256="1siwqm8sp8wqbb56961drkwcnkv3w1xiy81hxy0zcr2z7rscv7mh"; depends=[RCurl RJSONIO]; }; - RStata = derive2 { name="RStata"; version="1.0.0"; sha256="07y9c1yk2kh37adsdn3vx2k8hqggffiipn5gl1qf6ai5ls5xmfg5"; depends=[foreign]; }; - RStoolbox = derive2 { name="RStoolbox"; version="0.1.4"; sha256="0f6qr6zd2ajfvwxnsa09pdcr42fhg4wd07qr1a4yb7yk0jqawayy"; depends=[caret codetools doParallel foreach geosphere ggplot2 plyr raster Rcpp RcppArmadillo reshape2 rgeos sp XML]; }; + RStata = derive2 { name="RStata"; version="1.1.1"; sha256="1wx6cz4567xkfplybmbwmw25snhlaxn48yi620cv6p5xqv458yp7"; depends=[foreign]; }; + RStoolbox = derive2 { name="RStoolbox"; version="0.1.7"; sha256="122z9792bsh5afd1j9z7q8j1039hf86axw12w1r5cbrnkccnbgpj"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgeos sp XML]; }; RStorm = derive2 { name="RStorm"; version="0.902"; sha256="1apk358jwzg5hkrcq8h39rax1prgz9bhkz9z51glmci88qrw1frv"; depends=[plyr]; }; - RSurveillance = derive2 { name="RSurveillance"; version="0.1.0"; sha256="1y17bfv0glzzb5rfniia0z4px810kgv2gns0igizw7w427zshnm0"; depends=[epiR epitools]; }; - RSurvey = derive2 { name="RSurvey"; version="0.8-3"; sha256="0dqrajd3m2v5cd3afl9lni9amfqfv4vhz7kakg3a5180j5rcag12"; depends=[MBA rgeos sp]; }; + RStripe = derive2 { name="RStripe"; version="0.1"; sha256="0vp7zsd5xm8rf7196fivb76kkmxfx3gawxlyjhn9xqv92vawivra"; depends=[httr jsonlite RCurl]; }; + RSurveillance = derive2 { name="RSurveillance"; version="0.2.0"; sha256="1lvl9msnd8l9svd9nyivx1cqfmcxirxvfjfj0xv7yjklza8af7w3"; depends=[epiR epitools mc2d]; }; + RSurvey = derive2 { name="RSurvey"; version="0.9.0"; sha256="09ivilmwvjjbs3451cyxhcgq2w9rx6b8b5dsgg6y7l478k5bffrw"; depends=[colorspace inlmisc MBA raster rgdal rgeos sp]; }; RSvgDevice = derive2 { name="RSvgDevice"; version="0.6.4.4"; sha256="0vplac5jzg6bmvbpmj4nhiiimsr9jlbk8mzyifnnndk9iyf2lcmz"; depends=[]; }; RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; RTDE = derive2 { name="RTDE"; version="0.2-0"; sha256="1dj7dsj4256z9m70y2fpcgprxpqbgqxz0dqwn0jl80sj2325f66s"; depends=[]; }; RTOMO = derive2 { name="RTOMO"; version="1.1-3"; sha256="10qkqdx2zj2m854z9s57ddf5jbzagac9mq5v6z5393c0s8bx10x8"; depends=[GEOmap RPMG RSEIS splancs]; }; RTextTools = derive2 { name="RTextTools"; version="1.4.2"; sha256="1j3zfywq8xgax51mbizxz704i3ys4vzp8hyi5kkjzq6g2lw7ywq2"; depends=[caTools e1071 glmnet ipred maxent nnet randomForest SparseM tau tm tree]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; - RTriangle = derive2 { name="RTriangle"; version="1.6-0.6"; sha256="1g4dp792awbvsl35nvyd8gkx99p2njdcafin16qysfrjl43f5i4s"; depends=[]; }; + RTriangle = derive2 { name="RTriangle"; version="1.6-0.8"; sha256="0mngwi7ybcg6lsk3f7faljwnzsfvyxln4jd2s2hiirr303ml4wzg"; depends=[]; }; RUnit = derive2 { name="RUnit"; version="0.4.31"; sha256="1jqr871jkll2xmk7wk5hv1z3a36hyn2ibgivw7bwk4b346940xlx"; depends=[]; }; - RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-53"; sha256="0lapj54w0vr2v5qsnllq1p7nibqldqw1pi2qxlzzypl9lixznxw2"; depends=[ade4 boot car cramer lme4 MASS mixOmics multcompView nnet pls pspearman statmod vegan]; }; + RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-62"; sha256="0b4g0ia5kawamm6mpzw04365j1cgf8py5dp18kdsqwgisxxm699f"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman statmod vegan]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; RVPedigree = derive2 { name="RVPedigree"; version="0.0.3"; sha256="0v47bcdlcd0ydw4vffy1g9lj1azvyqwz4400nmlqshf9vqyhf9qq"; depends=[CompQuadForm doParallel foreach kinship2 ks Matrix snpStats]; }; RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; - RViennaCL = derive2 { name="RViennaCL"; version="1.7.1-1"; sha256="135wa3q954nrkwfs5q0x2z9q6izjxyz4wzk7wx4ncx56jqp038kz"; depends=[]; }; - RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.6"; sha256="06f2lmls92qkbscss00c99xkzpx83mgjah6ds0sixv1b2qi216ap"; depends=[Rcpp]; }; - RVsharing = derive2 { name="RVsharing"; version="1.4.0"; sha256="1csnmh3hhzbzp6cj7s8q41bjac26ng0p22vd696pqc0sl0fprppw"; depends=[kinship2]; }; + RViennaCL = derive2 { name="RViennaCL"; version="1.7.1.4"; sha256="0g7ckda8a278zg5vpfgajpa17r4hknf5akn556afyhmigj8bdax1"; depends=[]; }; + RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.8"; sha256="013mh8ghxccrhdcrcdfqll2jgf3z5zw7fsn0083bn3nkr19xbabz"; depends=[Rcpp]; }; + RVsharing = derive2 { name="RVsharing"; version="1.7.0"; sha256="1z1jwj6dzyib8sxpz4p4wpiizfhxz6sp62nnig779rhnv7wfkqqf"; depends=[kinship2]; }; RVtests = derive2 { name="RVtests"; version="1.2"; sha256="0k7w6ml981zvr5bix197qw4kaf7rz5jqnwqlxf7aryxbm39gk16c"; depends=[glmnet pls spls]; }; RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; }; - RWeather = derive2 { name="RWeather"; version="0.4"; sha256="1vm8w07gsxwxvg1gpdzn6mpnh8g9kp0ln9fxjw5rl2f1zz80bxpy"; depends=[XML]; }; RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; }; - RWeka = derive2 { name="RWeka"; version="0.4-25"; sha256="0bskypj9153593jq4l4rn9wibydv3py9pq2qmk803d3aqggbqzyg"; depends=[rJava RWekajars]; }; - RWekajars = derive2 { name="RWekajars"; version="3.7.13-1"; sha256="0g8xddi654s4xih5mx6fr1ra7jha9hxhnbns688vqp7l75nv5xgf"; depends=[rJava]; }; - RWiener = derive2 { name="RWiener"; version="1.2-0"; sha256="1ssh4xcyr4whgyd91p6bjsm9mq1ajqjqva0yyk13dnf5jfpsr0gs"; depends=[]; }; - RXKCD = derive2 { name="RXKCD"; version="1.7-5"; sha256="0dsds1bv2vfq61gfppar2ai23dryh09ric5i6zaccms6q64z23md"; depends=[jpeg plyr png RJSONIO]; }; + RWeka = derive2 { name="RWeka"; version="0.4-31"; sha256="0g801r5whb9iw6lxkjv89w042qb3iig8qw7bpwxjnlc2i8didzy4"; depends=[rJava RWekajars]; }; + RWekajars = derive2 { name="RWekajars"; version="3.9.1-1"; sha256="0kr9amnldnaz5vhmy0qkr3a0393wzqcl5x55qc8yqxq6g1ypzg5v"; depends=[rJava]; }; + RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; + RWildbook = derive2 { name="RWildbook"; version="0.9.2"; sha256="1bzdj55v7g2vlffpdsxpl8gv4k1xxd3xl7h1whvq6q5x76lprw0g"; depends=[data_table jsonlite marked]; }; + RXKCD = derive2 { name="RXKCD"; version="1.7-7"; sha256="13g5nylxh6ms57k2bhz3isfwcbxr4z0swcqja8inky25bid7jqgk"; depends=[jpeg png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; RXshrink = derive2 { name="RXshrink"; version="1.0-8"; sha256="0l4aknr1vxrkxqsgkjcffs0731jskyzvl055a01vd8h4a0826n5s"; depends=[lars]; }; RYandexTranslate = derive2 { name="RYandexTranslate"; version="1.0"; sha256="0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s"; depends=[httr jsonlite RCurl]; }; RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; - RadOnc = derive2 { name="RadOnc"; version="1.1.1"; sha256="05ba1yb37fzd2w3w69r4kyjnpgxjg5ssixxhh4iak6g9b3c0i5gq"; depends=[geometry oro_dicom ptinpoly rgl]; }; + RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; + RadOnc = derive2 { name="RadOnc"; version="1.1.2"; sha256="03pcv5wh1v12k6wys4n1j2gz1x0pzrxnjj7lbimcy7plv183psfi"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; + Radviz = derive2 { name="Radviz"; version="0.7.0"; sha256="0x1b3s3i3f775m7ragvzpdswljry8adbkjb6aq35aqasnkvvnysq"; depends=[gridBase hexbin KernSmooth MASS]; }; + Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; Rambo = derive2 { name="Rambo"; version="1.1"; sha256="1yc04xsfkc54y19g5iwambgnlc49ixjjvfrafsgis2zh5w6rjwv8"; depends=[sna]; }; - Ramd = derive2 { name="Ramd"; version="0.2"; sha256="0a64rp4dwhfr6vxsmya16x7wy7rxj4n98sdhhyy0ll850rdzlxd8"; depends=[]; }; - RandVar = derive2 { name="RandVar"; version="0.9.2"; sha256="04hw4v2d9aa8z9f8wvwbzhbfy8zjl5q8mpl9b91q86fhh1yq5cz4"; depends=[distr distrEx]; }; - RandomFields = derive2 { name="RandomFields"; version="3.1.8"; sha256="1yaf7mzhi61n7s3n44fxwilry5s7wnqq7sbx09jarm1jkbn3gk6x"; depends=[RandomFieldsUtils sp]; }; - RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.0.14"; sha256="1phnzmj9cbdaxp1v47irxk0c41fyh5qqs7m9y1gxvkpy2l8xkfr2"; depends=[]; }; + RandPro = derive2 { name="RandPro"; version="0.1.0"; sha256="10zb8xhcb54jscfnpz734c7kh43pgi3bb61yasi6rvlqd83g1zdn"; depends=[]; }; + RandVar = derive2 { name="RandVar"; version="1.0"; sha256="0iqq1hh1gl2kzgyfxp6bs31pmj5ic4y6wqwm7iaj20gk2wv923jg"; depends=[distr distrEx startupmsg]; }; + RandomFields = derive2 { name="RandomFields"; version="3.1.36"; sha256="04pj5zl6az69xa9nr044l1rqkl4hzxdzvw99yvn0qppiqkn8grc2"; depends=[RandomFieldsUtils sp]; }; + RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.3.15"; sha256="0cr8xngvc5984q4h444x05lqxqh6ml8pcgg3pigyg77jafapmy6l"; depends=[]; }; RankAggreg = derive2 { name="RankAggreg"; version="0.5"; sha256="1c5ckk2pfkdxs3l24wgai2xg817wv218fzp7w1r3rcshxf0dcz2i"; depends=[gtools]; }; RankResponse = derive2 { name="RankResponse"; version="3.1.1"; sha256="04s588zbxcjgvpmbb2x46bbf5l15xm7pwiaxjgc1kn1pn6g1080c"; depends=[]; }; - Rankcluster = derive2 { name="Rankcluster"; version="0.93.1"; sha256="1ki0x8fkdzvycyqgx5z2wrdgcjmbj0c379f88k6hngvg7h1fq05k"; depends=[Rcpp RcppEigen]; }; + Rankcluster = derive2 { name="Rankcluster"; version="0.94"; sha256="0ak6cpm073ym4h9l3j7pq0ks9h4is1hzxfjn52j23nc5ifq3fjpq"; depends=[Rcpp RcppEigen]; }; RapidPolygonLookup = derive2 { name="RapidPolygonLookup"; version="0.1"; sha256="0m6r11ksryzcfcm265wr9fhwb867j9ppfhalvvygzig5j85sg92k"; depends=[PBSmapping RANN RgoogleMaps sp]; }; - Rarity = derive2 { name="Rarity"; version="1.3-4"; sha256="0zz1axr8a1r6js0la2ncls0l6jnjvx807ay2ngzb52hqbijifghx"; depends=[]; }; + Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; RaschSampler = derive2 { name="RaschSampler"; version="0.8-8"; sha256="0y7dkgv1cy6r1mbmyqm27qwl10rl12g1svpx9jkzq5hq0hnm2xhw"; depends=[]; }; RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; }; + RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.0"; sha256="0ch368wvvknm38wvjhk2ia0ihk8hikpssph9n0q4p2gzq9m4vj57"; depends=[ggplot2 pROC]; }; + Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; RbioRXN = derive2 { name="RbioRXN"; version="1.5.1"; sha256="0lc43wm986y3xbdh1xihn7w583cql9kvj6rb018pn06ghz153i0d"; depends=[ChemmineR data_table fmcsR gdata KEGGREST plyr RCurl stringr]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; - Rblpapi = derive2 { name="Rblpapi"; version="0.3.3"; sha256="1w5dwza2ly38yz0cpazjibvfv147z86njrwxmdhw9msz2a7lj2gj"; depends=[BH Rcpp]; }; - Rborist = derive2 { name="Rborist"; version="0.1-0"; sha256="1irb9scl68m7skqdwny9kvnzg7f1r0q1c0whzqyhhj9l4lw16hmr"; depends=[Rcpp RcppArmadillo]; }; + Rblpapi = derive2 { name="Rblpapi"; version="0.3.5"; sha256="1ykwk3iv4ji8pmcm7kgppqg6sh5gw51n6sv039sfzapw6357i5vq"; depends=[BH Rcpp]; }; + Rborist = derive2 { name="Rborist"; version="0.1-3"; sha256="034mn30in3y8pmwks3xp8qadgzfjslp01py8jwm4zqsb3icxcvi5"; depends=[Rcpp RcppArmadillo]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-2"; sha256="1nsxy5vpfv7fj03i6l5pgzjm0cldwqxxycnvqkfkshbryjcyl0ps"; depends=[]; }; RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; }; - Rcereal = derive2 { name="Rcereal"; version="1.1.2"; sha256="1cl2b96zk9kc01n7xp60z3855lscczf18yjyp0h3lgf57cr04gf5"; depends=[]; }; + Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; }; Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; - Rchoice = derive2 { name="Rchoice"; version="0.3"; sha256="1ac2nw03g66z2rgxzv8jqad74cp4c9ry0hvnw77d57ddaxszkrva"; depends=[Formula maxLik msm plm plotrix]; }; + Rchoice = derive2 { name="Rchoice"; version="0.3-1"; sha256="1mx50270vbhvng4vdcc6w94f3l890vjl41y07bqkv40n93fxvffw"; depends=[Formula maxLik msm plm plotrix]; }; Rclusterpp = derive2 { name="Rclusterpp"; version="0.2.3"; sha256="02s5gmmmd0l98wd1y884pjl3h289dyd9p9s7dh7yl2zaslqs2094"; depends=[Rcpp RcppEigen]; }; - Rcmdr = derive2 { name="Rcmdr"; version="2.2-3"; sha256="1mbd5m5gc3x9ndx3c8a4ra1zh8c7ppc6bir2f7i6bwcji5jr2jbm"; depends=[abind car RcmdrMisc tcltk2]; }; - RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-3"; sha256="134yr2n0m61bw8rv1iar2l9dk9a178k2pxba0bsxrd1c9j3s1f0j"; depends=[abind car colorspace e1071 Hmisc MASS readxl sandwich]; }; + Rcmdr = derive2 { name="Rcmdr"; version="2.3-2"; sha256="07p22b6kbx2md6h911jzgiin2rds76aizn9d7nd6l4lxp8a76c09"; depends=[abind car RcmdrMisc relimp tcltk2]; }; + RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-5"; sha256="11y53wzxflpyq6p187yihs0xpa9nv2rkqhzl70k0mrchvv625bcr"; depends=[abind car colorspace e1071 Hmisc MASS readxl sandwich]; }; RcmdrPlugin_BCA = derive2 { name="RcmdrPlugin.BCA"; version="0.9-8"; sha256="0xkip7q9i57ghgz0rh0pl8nkl7bflf4w1g4zbyjdlcjypyf7lnr8"; depends=[BCA car flexclust foreign nnet Rcmdr RcmdrMisc rpart rpart_plot]; }; + RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.0"; sha256="1gigmvzmndxnplsy9w3znj6x4qayka7flzpgj5nsxaqw8xp1z1ip"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; RcmdrPlugin_EBM = derive2 { name="RcmdrPlugin.EBM"; version="1.0-10"; sha256="02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw"; depends=[abind epiR Rcmdr]; }; - RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.32"; sha256="1zd467z7ydlv9w9gr4qqs3yl4xbmxc8pfw55mqdn6zz11xjbxbpk"; depends=[Rcmdr]; }; - RcmdrPlugin_EcoVirtual = derive2 { name="RcmdrPlugin.EcoVirtual"; version="0.1"; sha256="00yk09c1d1frwpfq12zvhg4gnc3p63r61abnil623jpr6wh4b2x8"; depends=[EcoVirtual Rcmdr]; }; + RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.35"; sha256="1lppf84s9ymdmbyx6p7f2vvkrg7gbap5rf2yf759l0bqjcx954a7"; depends=[Rcmdr]; }; + RcmdrPlugin_EcoVirtual = derive2 { name="RcmdrPlugin.EcoVirtual"; version="1.0"; sha256="0q879wnrmgbaddv883q9zdnp0i7kjcgn8cffv7lp8nrsqil6l7mc"; depends=[EcoVirtual Rcmdr]; }; RcmdrPlugin_Export = derive2 { name="RcmdrPlugin.Export"; version="0.3-1"; sha256="17fn3si6b6h20c52k1k6fv9mslw3f9v0x1kxixzcvq54scdx0sk0"; depends=[Hmisc Rcmdr xtable]; }; RcmdrPlugin_FactoMineR = derive2 { name="RcmdrPlugin.FactoMineR"; version="1.6-0"; sha256="07k9x3mdaqzk1503wjsha9f8bxzw1074i9g7sa16yqz5lwky4lr7"; depends=[FactoMineR Rcmdr]; }; + RcmdrPlugin_FuzzyClust = derive2 { name="RcmdrPlugin.FuzzyClust"; version="1.1"; sha256="1lg6k3h4n45s6wjkl3ycwfngfr2i6mkhirifhbazsvv297bg0iba"; depends=[clue doParallel foreach ggplot2 iterators MASS Rcmdr reshape2 tcltk2 tkrplot]; }; RcmdrPlugin_GWRM = derive2 { name="RcmdrPlugin.GWRM"; version="1.0.1"; sha256="1ib9lpvz0ns3f44in29cvh746zl101lrv29p1df1zcdfcjnq1qq1"; depends=[GWRM Rcmdr RcmdrMisc]; }; - RcmdrPlugin_HH = derive2 { name="RcmdrPlugin.HH"; version="1.1-43"; sha256="0bn94wcrzvcrzhixh8kyg5gkax762mskhm2wvdfz1sm3n6fc7281"; depends=[HH lattice mgcv Rcmdr]; }; + RcmdrPlugin_HH = derive2 { name="RcmdrPlugin.HH"; version="1.1-46"; sha256="0bl9nq89ga16rxlf411lbm5qsx28f1axxwchr5rp46n0h15d0d3f"; depends=[HH lattice mgcv Rcmdr]; }; RcmdrPlugin_IPSUR = derive2 { name="RcmdrPlugin.IPSUR"; version="0.2-1"; sha256="1lk7divj5va74prsnchq8yx9fbyym7xcsyqzkf72w448fgvvvwlv"; depends=[Rcmdr]; }; - RcmdrPlugin_KMggplot2 = derive2 { name="RcmdrPlugin.KMggplot2"; version="0.2-3"; sha256="1nkpj36mxqlfnxk7q023vbcm202kcjhba5jjccqkpikmggbqx9jz"; depends=[ggplot2 ggthemes plyr Rcmdr RColorBrewer scales survival tcltk2]; }; + RcmdrPlugin_KMggplot2 = derive2 { name="RcmdrPlugin.KMggplot2"; version="0.2-4"; sha256="0lmsd76q31bg2j8jd5p0891wi8cxibpjqx0196177w3y9kgcj3s1"; depends=[ggplot2 ggthemes plyr Rcmdr RColorBrewer scales survival tcltk2]; }; RcmdrPlugin_MA = derive2 { name="RcmdrPlugin.MA"; version="0.0-2"; sha256="1zivlc0r2mkxpx23ba76njmb2wnnjijysvza4f24dg4l47d0sr2p"; depends=[MAd metafor Rcmdr]; }; - RcmdrPlugin_MPAStats = derive2 { name="RcmdrPlugin.MPAStats"; version="1.2.0"; sha256="13nrgrxx2x76mq0xanhwdcadc82pd6i3q535nxn55jspabir6lqc"; depends=[ordinal Rcmdr]; }; - RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.5"; sha256="1sj2f7mhlny2wn5wp4ig9ivl3nlywscapxdy01vmq0fczv073hfp"; depends=[MASS mixlm pls Rcmdr xtable]; }; - RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-1"; sha256="1hk8gmv74mngcx2pjgv1zkdh2csixxgd4yqz38bdn1l2zf243czq"; depends=[coda igraph Rcmdr rmeta runjags]; }; + RcmdrPlugin_MPAStats = derive2 { name="RcmdrPlugin.MPAStats"; version="1.2.1"; sha256="0c3mcr8bmmbpxsqm8zfy07cbyglnq5466nafbglfs5m0z836yz9i"; depends=[ordinal Rcmdr]; }; + RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.7"; sha256="1pfv4ar3i9mkj6d4jv206dpwhbz5an1yd4g758pxsanliy5mi6cb"; depends=[MASS mixlm phia pls Rcmdr xtable]; }; + RcmdrPlugin_PcaRobust = derive2 { name="RcmdrPlugin.PcaRobust"; version="1.1.4"; sha256="17rq3sv8payazjjn5j37cgd6df5b62d2y8al3grw6hw5nfba7lvn"; depends=[Rcmdr robustbase rrcov tkrplot]; }; + RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-2"; sha256="04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80"; depends=[coda igraph Rcmdr rjags rmeta runjags]; }; RcmdrPlugin_ROC = derive2 { name="RcmdrPlugin.ROC"; version="1.0-18"; sha256="0alwsvwry4k65ps00zvdqky9rh663bbfaw15lhwydbgcpqdkn2n6"; depends=[pROC Rcmdr ResourceSelection ROCR]; }; RcmdrPlugin_SCDA = derive2 { name="RcmdrPlugin.SCDA"; version="1.1"; sha256="0pd765ndh8d7hy6spds3r4pi09i0ak4b1ygwczp6yr2zcs1aikbc"; depends=[Rcmdr SCMA SCRT SCVA]; }; RcmdrPlugin_SLC = derive2 { name="RcmdrPlugin.SLC"; version="0.2"; sha256="1nwpzmgfla1y05dxf81w0wmvvmvcq5jn5k8phlq30920ia7ybs8g"; depends=[Rcmdr SLC]; }; RcmdrPlugin_SM = derive2 { name="RcmdrPlugin.SM"; version="0.3.1"; sha256="10sjh2x02kb6yaxbvd9ihc6777j4iv6wi6k42gyl3k7i2c39fyn3"; depends=[car colorspace Rcmdr RColorBrewer vcd]; }; - RcmdrPlugin_TeachingDemos = derive2 { name="RcmdrPlugin.TeachingDemos"; version="1.0-7"; sha256="0d473p0df99x9a3jfwb49gxsrcvslcw9yandramwq82cwy3sdcxw"; depends=[Rcmdr rgl TeachingDemos]; }; - RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="2.0-5"; sha256="1ykfln99qh07v6n0xaawgckrbw4vsnamsyzz0d47sgg8ffdbxifr"; depends=[randtests Rcmdr tseries]; }; + RcmdrPlugin_TeachingDemos = derive2 { name="RcmdrPlugin.TeachingDemos"; version="1.1-0"; sha256="0fgl1v1g74ca14pf3mmbv26j09v7jy6ddyap5qavgiy9s8qrwrh8"; depends=[Rcmdr rgl TeachingDemos tkrplot]; }; + RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="3.1-2"; sha256="1zhfa376409hyz375qvjf55my47dps2x8mlqn5a4pdcasmz90brp"; depends=[car randtests Rcmdr tseries]; }; RcmdrPlugin_coin = derive2 { name="RcmdrPlugin.coin"; version="1.0-22"; sha256="0qmdjnjmgq52wgl4llg69q9x7hvwd73mz3swv0sv88v8zqg7xj93"; depends=[coin multcomp Rcmdr survival]; }; RcmdrPlugin_depthTools = derive2 { name="RcmdrPlugin.depthTools"; version="1.3"; sha256="09mjn5jn4rdj1lh515vr3xlnk615flg13kcwbpk0an2si4xkgm9h"; depends=[depthTools Rcmdr]; }; RcmdrPlugin_doex = derive2 { name="RcmdrPlugin.doex"; version="0.2.0"; sha256="0l3c8vwifyl8a7qkfaqxm7cws2cg1g501qa93w5svcgp03yf98mj"; depends=[multcomp Rcmdr]; }; RcmdrPlugin_epack = derive2 { name="RcmdrPlugin.epack"; version="1.2.5"; sha256="1577qhac4rldifax5x3l39cddan6dhq2dv4iv2n64nadgrl0259w"; depends=[abind forecast MASS Rcmdr TeachingDemos tseries xts]; }; - RcmdrPlugin_lfstat = derive2 { name="RcmdrPlugin.lfstat"; version="0.7"; sha256="009yj9c5cr34k8qa16q19sp7c5iwv95g9swbm004nr18mfah8x9w"; depends=[lfstat Rcmdr]; }; + RcmdrPlugin_lfstat = derive2 { name="RcmdrPlugin.lfstat"; version="0.8.1"; sha256="1ak2fvz1sdbdr1y1w7i15gibwdh4a3662kvr23pka4lfpbsyrah8"; depends=[lfstat Rcmdr]; }; RcmdrPlugin_mosaic = derive2 { name="RcmdrPlugin.mosaic"; version="1.0-7"; sha256="0k6xaz2dfm9ch9lxqsh19jm8d4bbyjj2ffmjjxl57kanb3pvrrwv"; depends=[ENmisc Hmisc Rcmdr vcd]; }; RcmdrPlugin_orloca = derive2 { name="RcmdrPlugin.orloca"; version="4.1"; sha256="19qj6llr5sfw267dgbn2jvrsisb54qbjhgaiigfzymk6px33wwmg"; depends=[orloca orloca_es Rcmdr]; }; RcmdrPlugin_plotByGroup = derive2 { name="RcmdrPlugin.plotByGroup"; version="0.1-0"; sha256="10wc7lnihsrldsynq2s0syr1aqmvfnj9rhgwh1nkk7jlrwcgj0z6"; depends=[lattice Rcmdr]; }; @@ -2095,162 +2584,188 @@ in with self; { RcmdrPlugin_seeg = derive2 { name="RcmdrPlugin.seeg"; version="1.0"; sha256="105c2rl3mrcv7r3iqa9d2zs6cys7vfpyydylkg2cggfqkghxgr95"; depends=[Rcmdr seeg sgeostat spatstat]; }; RcmdrPlugin_sos = derive2 { name="RcmdrPlugin.sos"; version="0.3-0"; sha256="1r9jxzmf5ks62b5jbw0pkf388i1lnld6i27xhfzysjqdxcnzdsdz"; depends=[Rcmdr sos tcltk2]; }; RcmdrPlugin_steepness = derive2 { name="RcmdrPlugin.steepness"; version="0.3-2"; sha256="1na98sl42896y7yklaj07sn88lj6p6ik7gwy9ffaxzicqaa8plgf"; depends=[Rcmdr steepness]; }; - RcmdrPlugin_survival = derive2 { name="RcmdrPlugin.survival"; version="1.0-5"; sha256="1gcc9l1x0vmzmq7v09mzybig1js5jsgsq84096yk494w3dnzrr0a"; depends=[date Rcmdr survival]; }; - RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.5"; sha256="07lzn84na59sibgmyrrn444klxqgqqw0zf88j0ycnn41152hb4yi"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; + RcmdrPlugin_survival = derive2 { name="RcmdrPlugin.survival"; version="1.1-1"; sha256="0hgf52pk81wii2jfw69csapm4gw7xrp1cm08b9n2d29chgw0gww6"; depends=[date Rcmdr survival]; }; + RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.8"; sha256="0sgh2nqmlxsa6nzwdcdpad1q1mwwm6nb4xqpx4wj5afyisq2fbwr"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; + Rcoclust = derive2 { name="Rcoclust"; version="0.1.1"; sha256="1f4li4pr1cl0nnq21rbk1qksn44zl2p65w9zs6k9k4mb050cyjqy"; depends=[]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; - Rcplex = derive2 { name="Rcplex"; version="0.3-2"; sha256="1hx9s327af7yawzyq5isvx8n6pvr0481lrfajgh8nihj7g69nmk7"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="0.12.3"; sha256="11i3w6q5hwqq9mglyqdrj5fphb3iwrcp178kb4bjm95s2jzv5krr"; depends=[]; }; + Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; + Rcpp = derive2 { name="Rcpp"; version="0.12.9"; sha256="0pndpgmfmvkssvn9m3i4nbq2n6hxz3i4i8y2nlycn2gdipr0vggh"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; - RcppAPT = derive2 { name="RcppAPT"; version="0.0.1"; sha256="0fyya80bd3w22qbsbznj9y21dwlj30a16d8a8kww4x8bpvmyil5z"; depends=[Rcpp]; }; - RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.7"; sha256="0lhpnlrgdki8ljswi4yr2pfsm5lqx7ckfb09zlsjdw0lkz0vdb49"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.6.600.4.0"; sha256="0h83rkv706r36lawi21d7pv030zv81sdqzygjca95d43gvz8ap4l"; depends=[Rcpp]; }; + RcppAPT = derive2 { name="RcppAPT"; version="0.0.3"; sha256="0q1iwhf1rafzr6d7pjbxs0ii0anbfrzrl1kpz1ka5yvjw39s3kr8"; depends=[Rcpp]; }; + RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.8"; sha256="14hw9nrqwcqx2xwam03wfxk07qg648gp0cnk76c4knpr6pmad9sx"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.7.700.0.0"; sha256="03cvl2xgmvh4sylw7ff7s020y7k2wzyj34l0zngm09qs44pa9q0m"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; - RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.0.3"; sha256="0zsif6ijp806h3lrz5i3cfv84sb4mvc58mpb6iwrcfdwxagb3c8q"; depends=[Rcpp]; }; - RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.4"; sha256="1cawaxghbliy7hgvqz3y69asl43bl9mxf46nwpbxc0vx3cq15fnk"; depends=[Rcpp]; }; + RcppBlaze = derive2 { name="RcppBlaze"; version="0.1.1"; sha256="0r6mzsm2gq77i8cylcvgg7hn0399d3v11wlf89v559vslkv2b2m0"; depends=[BH Matrix Rcpp]; }; + RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.1"; sha256="0895cc1rzppniakvrl1r6k4c3vm45ppihv3vwvf5x062ag34yqsd"; depends=[Rcpp]; }; + RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.6"; sha256="0j2sj1yzpqmw6krjfyjklw4pmkdqdsnyvlfqbic0w1h8gs1mq6yb"; depends=[Rcpp]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.6"; sha256="1xhjama6f1iy7nagnx1y1pkqffrq8iyplllcar24vxr0zirgi1xi"; depends=[Rcpp]; }; RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.1"; sha256="0shs12y3gj5p7gharjik48dqk0fy4k2jx7h22ppvgbs8z85qjrb8"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.5"; sha256="1zgz8h7d7jjml9hm164y9wrsgcb1fymp3ipxp235fmk44lbrwpcw"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; - RcppEigen = derive2 { name="RcppEigen"; version="0.3.2.8.1"; sha256="10fn13fvlip92n8pbv08988ll89c6zjr9d9jj8zw5i9iamwbik6f"; depends=[Matrix Rcpp]; }; - RcppExamples = derive2 { name="RcppExamples"; version="0.1.7"; sha256="1dyw040cw8zvr2rryf2qw5jmvc3hpn292wk3iiagjgkibqx49af9"; depends=[Rcpp]; }; + RcppEigen = derive2 { name="RcppEigen"; version="0.3.2.9.0"; sha256="0fy9kr03160f1ywzff3p380s8a59jz7d2d0rggb14g2y0slzpbr5"; depends=[Matrix Rcpp]; }; + RcppExamples = derive2 { name="RcppExamples"; version="0.1.8"; sha256="15iw2vx6ygb03siq743418whhqvfrxk2i4nqn7p9yg1m3jwafxna"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; - RcppGSL = derive2 { name="RcppGSL"; version="0.3.0"; sha256="1960sn9c3k1vp791c11srkid2nvvnhwl3hjrcaaljd590bxh4hz8"; depends=[Rcpp]; }; - RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-2"; sha256="1hdvdk6ni2iganmldarklv635yzgzja36zcpflh5w45c5y3ysqvj"; depends=[BH Rcpp RcppArmadillo]; }; + RcppGSL = derive2 { name="RcppGSL"; version="0.3.1"; sha256="00jqn1ix0qpv1zn8ciz161pq6gxq5had1afm194k6k7hahph3bip"; depends=[Rcpp]; }; + RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.2"; sha256="0z5sg2jlr465196ws2pqi7j7hfmd7j8xlqqj6841m635cg4q48ba"; depends=[Rcpp]; }; + RcppHMM = derive2 { name="RcppHMM"; version="1.0.1"; sha256="10ssg2558s6cw6f6adzpw76qcsizbllc70y1s8vbhb2xkc26d1cn"; depends=[Rcpp]; }; + RcppHoney = derive2 { name="RcppHoney"; version="0.1.6"; sha256="1llbs6x4qcvgnlmnd391s1j9lqvybnnq3d4gjwyyc8vy2i5jr28c"; depends=[Rcpp]; }; + RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-6"; sha256="0vjx6azp3sny6nv5k1cs6vk61hmbllqw8mgvi7zn15p7ilmhsyyi"; depends=[BH Rcpp RcppArmadillo]; }; + RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-1"; sha256="1b88iz0f13w148jrmd3qdkagycs7w3yr82y4zgn123kp17y7vvny"; depends=[Rcpp RcppEigen]; }; RcppOctave = derive2 { name="RcppOctave"; version="0.18.1"; sha256="1b2mwnsx799a86hdpkqy6l1m048g8hqz57l70siybkxnlaib3z0f"; depends=[digest pkgmaker Rcpp stringr]; }; - RcppParallel = derive2 { name="RcppParallel"; version="4.3.15"; sha256="03hyawm2zispknz157nn8rvf52kg15jdl0pv8282zjrq8xh8477x"; depends=[]; }; - RcppProgress = derive2 { name="RcppProgress"; version="0.2.1"; sha256="1dah99679hs6pcaazxyc52xpx5wawk95r2bpx9fx0i33fqs1s4ng"; depends=[Rcpp]; }; - RcppRedis = derive2 { name="RcppRedis"; version="0.1.6"; sha256="1jslck903qi6i8vsb7a2svh887linak00ylmhabzkbbsjrjchp9h"; depends=[RApiSerialize Rcpp]; }; + RcppParallel = derive2 { name="RcppParallel"; version="4.3.20"; sha256="1hc325hj214s61694iy4j3ly5zkya25h92hki29n3562qiirpb0g"; depends=[BH]; }; + RcppProgress = derive2 { name="RcppProgress"; version="0.3"; sha256="0796g11w7iv3ix1wfm3fh09qq7jki4r4cp1mjagq77igri3xrr9x"; depends=[Rcpp]; }; + RcppRedis = derive2 { name="RcppRedis"; version="0.1.7"; sha256="0x456zrd7qv8iclhdbgl4bwa1bvpirlqx6ywsincj6y0446f13rz"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.2.2"; sha256="19xzvxym8zbighndygkq4imfwc0abh4hqyq3qrr8aakyd096iisi"; depends=[Rcpp]; }; RcppSMC = derive2 { name="RcppSMC"; version="0.1.4"; sha256="1gcqffb6rkw029cpzv7bzsxaq0a5b032zjvriw6yjzyrpi944ip7"; depends=[Rcpp]; }; - RcppShark = derive2 { name="RcppShark"; version="0.1"; sha256="04l70d51ww247q0irk6jyhy3csybb8bhrw9cidinb0b18dcqmbyq"; depends=[BH checkmate Rcpp]; }; - RcppStreams = derive2 { name="RcppStreams"; version="0.1.0"; sha256="0pb9ri2jajfh7643wx730bkmpvjvvmip682ynm2yn6x6brjll6jf"; depends=[BH Rcpp]; }; - RcppTOML = derive2 { name="RcppTOML"; version="0.0.5"; sha256="0c4595ps1wawdx5f1ipsa4rg307rp4f0fivpl4qa1qhps6hn9h0f"; depends=[Rcpp]; }; + RcppShark = derive2 { name="RcppShark"; version="3.1.0"; sha256="0fyf7ffv5hhxnandrrx9xg72zwrw8cp73bwmb48iy5514gdwg77a"; depends=[BH checkmate Rcpp]; }; + RcppStreams = derive2 { name="RcppStreams"; version="0.1.1"; sha256="0sa0ndnfm89f8lh3ba6jf3gxaan1g97dhlzbmpkwqj22frgggqjw"; depends=[BH Rcpp]; }; + RcppTOML = derive2 { name="RcppTOML"; version="0.1.1"; sha256="1kmhmi13666zv3zsy3wlmh13picvicjc1nrlv9dqjzwcwahpih1l"; depends=[Rcpp]; }; RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; }; RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.3"; sha256="0s82haf96krr356lcf978f229np6w0aihm2qxcnlm0w3i02gzh3x"; depends=[Rcpp RcppGSL]; }; - Rcsdp = derive2 { name="Rcsdp"; version="0.1.53"; sha256="0x91hyx6z9f4zd7djxlq7dnznmr9skyzwbbcbjyid9hxbcfyvhcp"; depends=[]; }; - Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.6"; sha256="0y0vh1dfflh8lrgrdj9wfmwh70ywd9kiia49f09h849mv1ln1z60"; depends=[formatR roxygen2]; }; + Rcsdp = derive2 { name="Rcsdp"; version="0.1.55"; sha256="1sskjf2vv5alnwirz676d8yphzk2a69wkghhkpxb8my1rjlfdgaw"; depends=[]; }; + Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.6.1"; sha256="1rvqb3lsn5br9cmj63c9ql4dkp0igdrag65sxgajpsyqkpyg17qn"; depends=[formatR roxygen2]; }; + Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; Rdistance = derive2 { name="Rdistance"; version="1.3.2"; sha256="1ajmr58lgc74727jiydfrh4j6ra7vq8hp8nm3l2s3g2mc8n1mqk5"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="0.4-18"; sha256="0s387gadr1bz5f5ix69z0r9hzcp5w4axbrn1iq9932kkincmg8qj"; depends=[bibtex gbRd]; }; - Rdsdp = derive2 { name="Rdsdp"; version="1.0.4"; sha256="1cgfm2yyqak9hgyzb8k7c9rspbplcckwxnkq2wqapfgx2majxrip"; depends=[]; }; + Rdpack = derive2 { name="Rdpack"; version="0.4-20"; sha256="1b1vikh8py4lvf6w90919y8f5aq9xyhv2pprfyzfx0671k99cz6z"; depends=[bibtex gbRd]; }; + Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; Rdsm = derive2 { name="Rdsm"; version="2.1.1"; sha256="07fc6c2hv0vvg15va552y54cla1mrqsd75w3zh02vc7yd226l4rj"; depends=[bigmemory]; }; + Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; }; ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; }; + ReIns = derive2 { name="ReIns"; version="1.0.2"; sha256="05ipf3gvgfv3q58mdh3g9zg7z7wm0gvigb839y1nprb98wvrqj2f"; depends=[doParallel foreach Rcpp survival]; }; ReacTran = derive2 { name="ReacTran"; version="1.4.2"; sha256="1yc0k3wgg4yb6cqmjkyl25sfkbfcfxi5ria106w5jyx7dr5lfvdi"; depends=[deSolve rootSolve shape]; }; RealVAMS = derive2 { name="RealVAMS"; version="0.3-2"; sha256="0rmqy3csgfvq5c3sawvd3v37is8v5nnnrhifschqfsycmadf1gdp"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; - RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-8"; sha256="0wjjrgmz7m11hhsw7dcg3745255xckdgrqp3xlqkyh2kzbyr9rp4"; depends=[ada data_table DBI e1071 evd ff ffbase ipred nnet rpart RSQLite xtable]; }; + RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-10"; sha256="09xp0ad7v2bsg1r7gf3awdqcpds0v3ygsbnkm8ysy8w14sbrrydf"; depends=[ada data_table DBI e1071 evd ff ffbase ipred nnet rpart RSQLite xtable]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.0.2"; sha256="1113dm41rhyimn7jc3pkrdqz3biqg5m174vz24jchhmn9n38zsss"; depends=[igraph RJSONIO]; }; + Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; RefFreeEWAS = derive2 { name="RefFreeEWAS"; version="2.0"; sha256="1mli7h3d4vw0sds6pav74fzpw4c3lmy7jrlp0dw47cmfxg2rhslg"; depends=[isva quadprog]; }; - RefManageR = derive2 { name="RefManageR"; version="0.10.6"; sha256="0wghxrd3ijvbzr945nbqba2cpn4vrzpny4yqlhala7fbdrd0kbbf"; depends=[bibtex lubridate plyr RCurl RJSONIO stringr XML]; }; + RefManageR = derive2 { name="RefManageR"; version="0.13.1"; sha256="1yw3fbiis1gl7ih66b4vjr299xy3w164irmmdfsqr79n9h3p5kv7"; depends=[bibtex httr lubridate plyr RCurl RJSONIO stringr XML]; }; RegClust = derive2 { name="RegClust"; version="1.0"; sha256="1d9w74phw4fgafglc18j7dpmln96fvxnf1kdc9zddgj90p8yfx63"; depends=[]; }; - RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.1"; sha256="1zx885x49ncp2cl1v8hxzc3r2njka9cjsadjykbvqp9pdbm4ga5l"; depends=[]; }; + RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.2"; sha256="1g23paq42xiiqavikbrflwmr8ikls9z97v1xpgg16pb88svdyayc"; depends=[]; }; RelValAnalysis = derive2 { name="RelValAnalysis"; version="1.0"; sha256="1jl1gfj44gfkmc1yp6g5wwn4miydwpvxwrg76rnkv9454zrc5pvp"; depends=[zoo]; }; - Relatedness = derive2 { name="Relatedness"; version="1.3"; sha256="0ydfv8blqy7rfczh22cs704qsl3kzwfmw4pmbhci0m212y2dgm0y"; depends=[]; }; + Relatedness = derive2 { name="Relatedness"; version="1.4"; sha256="0ahd053sbqwjq93l8m2gq7fqqc9vvgnndz4j8pmgswwcah8h77c8"; depends=[]; }; Reliability = derive2 { name="Reliability"; version="0.0-2"; sha256="12zsicgbjqih3grbs62pw37x8wlkmnyc7g0yz6bqnfb4ym2yb7fg"; depends=[]; }; ReliabilityTheory = derive2 { name="ReliabilityTheory"; version="0.1.5"; sha256="14k979b9baqnz1gbhbjnp76nvdg5z1sc6p29h3v9qgvwv4aanp4v"; depends=[actuar combinat FRACTION HI igraph mcmc PhaseType sfsmisc]; }; - Renext = derive2 { name="Renext"; version="3.0-0"; sha256="0byjr9jf2wmcg9adcxfky544icj6fclyscjj2l93ynwpcs9lmjan"; depends=[evd numDeriv]; }; - RenextGUI = derive2 { name="RenextGUI"; version="1.3-0"; sha256="0ydq57k5va1l10dxyh4hvk3r6d0wncqx9ncj5bkc5691lamqjmj4"; depends=[gWidgets gWidgetstcltk Renext]; }; + Renext = derive2 { name="Renext"; version="3.1-0"; sha256="074djs4y71667aylpgh514pzijr90rgpzm4w5ayq9cgaqz22m3am"; depends=[evd numDeriv]; }; + RenextGUI = derive2 { name="RenextGUI"; version="1.4-0"; sha256="0jfg4a85j06wxk8vq2q6j8md2kcss0s7k71218gfh9vybk7hl4h6"; depends=[gWidgets gWidgetstcltk R2HTML Renext]; }; Reol = derive2 { name="Reol"; version="1.55"; sha256="0147x3fvafc47zd2chgv3b40k480pcjpji8vm1d741i1p6ml448p"; depends=[ape RCurl XML]; }; ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; }; - RepeatABEL = derive2 { name="RepeatABEL"; version="1.0"; sha256="0qd6ijqfm32h87hncndv2n47rmn16gnbnkr0dg89h96xc3miyn2p"; depends=[GenABEL hglm]; }; + RepeatABEL = derive2 { name="RepeatABEL"; version="1.1"; sha256="00bq9ls4d0kczdv752xasqbavb11bjfvpriggfc8dw3g3i7pizpg"; depends=[GenABEL hglm]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; - ReporteRs = derive2 { name="ReporteRs"; version="0.8.6"; sha256="0j3945xgzvc9by623kfb1ds9xxsgax8yvvc78wv57lhlkzsb729l"; depends=[gdtools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; + ReporteRs = derive2 { name="ReporteRs"; version="0.8.8"; sha256="1pw3hy3g0nc6amga59sb1nnwqc9asdpn6lh2zfh87y8nazrf1hf0"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.2"; sha256="1abvgzxipg0cgiy26z14i99qydzqva6j2v7pnrxapysg7ml5cnjc"; depends=[rJava]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-28"; sha256="055zr4rybgrvg3wsgd9vhyjpvzdskrlss68r0g7rnj4yxkix0kxz"; depends=[]; }; - ResourceSelection = derive2 { name="ResourceSelection"; version="0.2-6"; sha256="0ysssac4f5xdpr3wk1d36dpqbzxabw49flm2yiifpfwzqgwz4r5c"; depends=[MASS pbapply]; }; - RevEcoR = derive2 { name="RevEcoR"; version="0.99.2"; sha256="100sman51vvwg5xkypmksyyjqdb6g858z29vn7x4kvly8ncw4hfd"; depends=[gtools igraph magrittr Matrix plyr stringr XML]; }; - Rfacebook = derive2 { name="Rfacebook"; version="0.6.3"; sha256="1whhrg2w7g1j6p5rhk3zqvigbjdwy3p7c094lmj1c42p4607nc52"; depends=[httpuv httr rjson]; }; - Rfit = derive2 { name="Rfit"; version="0.22.0"; sha256="1qnfm2p8xqz45ma53fl9ddagj5spfl8i9sxvn3rq19dgkwbdhqw2"; depends=[quantreg]; }; + ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-1"; sha256="1x7kc0zh22pqi7dw4iav9dac8wpj491lpqbnaqfncyhswpdkimvi"; depends=[MASS Matrix pbapply]; }; + RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; + Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; + Rfacebook = derive2 { name="Rfacebook"; version="0.6.11"; sha256="1si21in7ykv4532xsz12v9nwzfj142bnbf14qc74fbp1p087k6c0"; depends=[httpuv httr rjson]; }; + Rfast = derive2 { name="Rfast"; version="1.7.4"; sha256="1yrg3iflppbpjmw8rah4jdgwksnqplc0l3ds492s9zrw51vxz38c"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; + Rfit = derive2 { name="Rfit"; version="0.23.0"; sha256="1gxxipbh7mskrqwrpk1gf1dn8mp3l1v4hgmzii44bppffnxs7slp"; depends=[]; }; Rfmtool = derive2 { name="Rfmtool"; version="1.2"; sha256="1q359574fspwxy1lmlzfqk0cg3qih8jzh3rk74qr22jw0sp7bcyw"; depends=[]; }; + Rga4gh = derive2 { name="Rga4gh"; version="0.1.1"; sha256="0h5y722blkkwn6ask6vjnhl22v9l6511chdm50ig6xcs5dvjam2m"; depends=[httr jsonlite]; }; Rgbp = derive2 { name="Rgbp"; version="1.1.1"; sha256="14xban9d182fhss9ppr13scih7hrbjd9s231avi4gkg79cz87s0s"; depends=[mnormt sn]; }; - Rglpk = derive2 { name="Rglpk"; version="0.6-1"; sha256="011l60571zs6h8wmv4r834dg24knyjxhnmxc7yrld3y2qrhcl714"; depends=[slam]; }; + Rglpk = derive2 { name="Rglpk"; version="0.6-2"; sha256="1dzcc9dwdvrs1g9mgk5z9qdxn3iq04s91ak881z3wrqvxhp42cgr"; depends=[slam]; }; Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; - RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.2.0.7"; sha256="04k7h8hgxvgsccdiysbblplwjvn8m7g8h3anzdlxmmjaamd8l9lw"; depends=[png RJSONIO]; }; + RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.1"; sha256="0fsmlnhl4kw2j4972kfanzw9njhnzk695gsyw8g6yppsmz2clcaq"; depends=[png]; }; Rhpc = derive2 { name="Rhpc"; version="0.15-244"; sha256="1y83sshzsmsnm1m341x0ymmyz87dc5cjkbnr0v975p292rjqz3pd"; depends=[]; }; RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.15-148"; sha256="1carylfz9gafradbdyg7fz2bypr7n72fbm8vhyiinmp0k4s5ipvc"; depends=[]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; - Ritc = derive2 { name="Ritc"; version="1.0.1"; sha256="1h41s4jihzj0yj8xyan0zhhyyiq8m5567vw4gvmmr81p1qfzvva8"; depends=[minpack_lm]; }; + RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.1"; sha256="1kn0vb4nhm3bxlmk5y2nl5m7a7hdvz3nz0yp8rdigpl6b2dp79w1"; depends=[MASS nloptr quadprog]; }; + Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; }; Rjpstatdb = derive2 { name="Rjpstatdb"; version="0.1"; sha256="0iwgsp3mblp7bsx88wfpqn09y1xrkingfkm3z9jsi2bwrnrjc2iv"; depends=[RCurl XML]; }; - Rknots = derive2 { name="Rknots"; version="1.3.1"; sha256="0yv8k85jzviz3gafbwggn1y4vlcjnfdiyf93gi6yvygdnsnrq310"; depends=[bio3d rgl rSymPy]; }; + Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.1.129"; sha256="188h3j9hlx6ls0rs0f5n05l8d8l556dp49b93c77nw6bp7n4745l"; depends=[RCurl rjson]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.1.133"; sha256="1lvik88zfxlipr24qdj04faknfjsaiv6q75zllgz3v6rjbxvh4jz"; depends=[fasttime Rcpp RCurl rjson]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.3.7"; sha256="0k2snw8a6h4dvbpl97fklvvbbqma4g9r0ksvh5ndyk4vqwyxy1na"; depends=[Rcpp]; }; - Rlinkedin = derive2 { name="Rlinkedin"; version="0.1"; sha256="0w30zv4a842vckk4yqsh8hhkdz2gy650a0x29aacp77p9y79g9yn"; depends=[httpuv httr XML]; }; + Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; Rlof = derive2 { name="Rlof"; version="1.1.1"; sha256="1px6ax2mr2agbhv41akccrjdrvp8a9lmhymp0cn8fjrib0ig8vql"; depends=[doParallel foreach]; }; - Rmalschains = derive2 { name="Rmalschains"; version="0.2-2"; sha256="1ki3igj78sk4kk1cvbzrgzjdvw6kbdb7dmqglh6ws2nmr5b6a7fx"; depends=[Rcpp]; }; + Rmalschains = derive2 { name="Rmalschains"; version="0.2-3"; sha256="1gh0f385s1nq12mk6a5l3nj1gd2mc6jzd66lisnxbcip25s4b8pb"; depends=[Rcpp]; }; + RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.15.1"; sha256="1r8hyvm680fcw0qq1k5i3wachy6xnl86vvaf3vz5hrq789x4xkh5"; depends=[dplyr ggplot2 lazyeval lubridate magrittr plyr raster tidyr zoo]; }; Rmisc = derive2 { name="Rmisc"; version="1.5"; sha256="1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8"; depends=[lattice plyr]; }; - Rmixmod = derive2 { name="Rmixmod"; version="2.0.3"; sha256="0pxblg2si289599807hgcncq9jypabbrfpmv7fyg9hh7d8y19hd7"; depends=[Rcpp]; }; + Rmixmod = derive2 { name="Rmixmod"; version="2.1.1"; sha256="1m5yab7wq343bzg8xszbrlif3cd4d1x7xcqh82czkxbfni1gz7j7"; depends=[Rcpp]; }; RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; - Rmonkey = derive2 { name="Rmonkey"; version="0.3.1"; sha256="14x076qhcbil7v1bh5x3zivqg04svcb7fvap47kcp3g95dk9jvxa"; depends=[curl httr jsonlite plyr]; }; Rmosek = derive2 { name="Rmosek"; version="1.2.5.1"; sha256="0zggv699s93i9g98qjs4ci2nprgfkzq45lpzgrbhldsxiflf27gz"; depends=[Matrix]; }; - Rmpfr = derive2 { name="Rmpfr"; version="0.6-0"; sha256="06i5jzsddvync284ql16vlk439jp7la6n6yfgyxpck818hidz8a3"; depends=[gmp]; }; - Rmpi = derive2 { name="Rmpi"; version="0.6-5"; sha256="0i9z3c45jyxy86yh3f2nja5miv5dbnipm7fpm751i7qh630acykc"; depends=[]; }; + Rmpfr = derive2 { name="Rmpfr"; version="0.6-1"; sha256="073f01wga1ccxxgspsprjqdmb84iiap13mqhl7b6qcz9al89jl5z"; depends=[gmp]; }; + Rmpi = derive2 { name="Rmpi"; version="0.6-6"; sha256="184skad8m4y4pzk8v98b7k7prqxm9mg1b2pfxbknyvzakq6aizv1"; depends=[]; }; RnavGraph = derive2 { name="RnavGraph"; version="0.1.8"; sha256="1fwzfy41gdr1aw1wg6dw04mxwwpp5s9x2inxyq3bc9s8bm1rlxih"; depends=[graph rgl scagnostics]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.3"; sha256="1mrh0p2ckczw4xr1kfmcf0ri2h2fhp7fmf8sn2h1capmm12i1q8f"; depends=[]; }; - RobAStBase = derive2 { name="RobAStBase"; version="0.9"; sha256="1428xaplcjq6r0migbaqncfj0iz8hzzfabmabm167p44wa2bwbwh"; depends=[distr distrEx distrMod RandVar rrcov]; }; - RobLox = derive2 { name="RobLox"; version="0.9"; sha256="1ws6bkzvg1y1cwmls71das0lih6gncx5w3ncd2siznapd4n44p69"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; + RndTexExams = derive2 { name="RndTexExams"; version="1.4"; sha256="18zmdfq234k4bjj5rz6zjlkiyndbj5v2irjfl3w66vz38lk8sf6v"; depends=[CopyDetect data_table stringi stringr]; }; + RobAStBase = derive2 { name="RobAStBase"; version="1.0"; sha256="0s8hgvgqm6hf1nbhq1kj239f7zpchvzhds8281nfzlm5qzphylqj"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; + RobAStRDA = derive2 { name="RobAStRDA"; version="1.0.2"; sha256="1lyp2y38jnwv8ggrv9pdzprpf2gs62w1mpzwcqcbrmy7fzjsym0b"; depends=[]; }; + RobLox = derive2 { name="RobLox"; version="1.0"; sha256="0y193xai0mfwpm6zhxgy21h4yrlqrpvwx84bj4xnr8ql87wznh7q"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; RobLoxBioC = derive2 { name="RobLoxBioC"; version="0.9"; sha256="0ia7vn8x8whyp8kl7mpwd6fd0yv0y3pb1mppnh2329x7xdvcs5j4"; depends=[affy beadarray Biobase BiocGenerics distr lattice RColorBrewer RobLox]; }; - RobPer = derive2 { name="RobPer"; version="1.2.1"; sha256="1impcp2yfxxh439a70s2gqwfng6cgi123y20fd01b84jkp9gx3hi"; depends=[BB quantreg rgenoud robustbase]; }; + RobPer = derive2 { name="RobPer"; version="1.2.2"; sha256="0631qfpz61606r50vzn7b3h7arfwxcs8j13q1hg779qx60kwrliy"; depends=[BB quantreg rgenoud robustbase]; }; RobRSVD = derive2 { name="RobRSVD"; version="1.0"; sha256="07z5fw8j5lq7nyxgkvb9i4iwb5inddz2ib4m2bjx6q4c1ricpqz9"; depends=[]; }; RobRex = derive2 { name="RobRex"; version="0.9"; sha256="0ii539mjq462n1lbnyv3whl8b1agvhvlz31wwyz911gb40isl639"; depends=[ROptRegTS]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-1"; sha256="180gmlinrpnk4ghl1xickbjkdqr7vb6qzmy6701xpji5k8g9il60"; depends=[robustbase survival]; }; RobustEM = derive2 { name="RobustEM"; version="1.0"; sha256="1li9r3bk7zhpxljgqvr2zila8nb05nasvlzqlswwgi9443i740zi"; depends=[doParallel e1071 ellipse foreach ggplot2 mvtnorm]; }; + RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.3"; sha256="1kzi5mvz78gxwrg1z822pkqzmqwvw73x2gh2yfsaxcwy2d7nr2mx"; depends=[Rcpp RcppEigen]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; + Rodam = derive2 { name="Rodam"; version="0.1.2"; sha256="0fxsjzillr2v3sxbph13q3wrly6dx6m8rm276qzfvx1md044z14y"; depends=[RCurl]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.0"; sha256="1vcbjxx1yfla71fmmf5w8dqp0vqw93dxsjsvz0vj28bfqmkmh554"; depends=[]; }; - Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[GA]; }; + Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[ftsa GA]; }; RoughSetKnowledgeReduction = derive2 { name="RoughSetKnowledgeReduction"; version="0.1"; sha256="0zn6y2rp78vay9zwijpzhjpyq1gmcsa13m9fcsxkd1p2c8g5rbmf"; depends=[]; }; RoughSets = derive2 { name="RoughSets"; version="1.3-0"; sha256="08yz19ngipqpzfam6ivwsfnbg8ps2wwyi6djprmd7kfj0n43ab62"; depends=[Rcpp]; }; Rpdb = derive2 { name="Rpdb"; version="2.2"; sha256="0gf6qab05a3ky8skbbjiadizi1gs4pcw3zp25qj5gn82lb6382pd"; depends=[rgl]; }; + RpeakChrom = derive2 { name="RpeakChrom"; version="0.1.0"; sha256="0l7lgscj2lsbm2k1lmzwc15k533hkqz5yhyzz6m2ngg6qf8fhsy3"; depends=[ggplot2 minpack_lm pracma ptw]; }; Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; - Rphylopars = derive2 { name="Rphylopars"; version="0.2.1"; sha256="1407p6j6w41wg7apmjzl5xgjch97glqwn9pw0w95xz14ldnn8dk8"; depends=[ape doBy geiger Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; - Rpoppler = derive2 { name="Rpoppler"; version="0.0-1"; sha256="01zsbm538yhwm1cyz5j6x2ngz05yqj16yxyvyxqhn6jp8d0885jh"; depends=[]; }; - Rquake = derive2 { name="Rquake"; version="2.3-1"; sha256="0xb8j76jjv6k3r8nzjxdddic4rq1yj7qsh85asl38qwj7483cyc4"; depends=[cda GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; + Rphylopars = derive2 { name="Rphylopars"; version="0.2.9"; sha256="19y0j5vh82sa9jigylxhv0s0hgjyhx3xq4blvk55jhpj8v7iyiky"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; + Rpoppler = derive2 { name="Rpoppler"; version="0.0-3"; sha256="055ldafgf0lp3g2kjlpbhsq03fwwia6a6fwk7d4w5znihah9ibbg"; depends=[]; }; + Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; Rramas = derive2 { name="Rramas"; version="0.1-4"; sha256="191rm2ylvf3ffc9i4wpjvfbsinmw7s1m0wcq24j4qs4fxg8qqzyq"; depends=[diagram]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-14"; sha256="18ry07pi9iwskbxcimvp91fgpvrlaf44z0hp7k90dnyaa8qpbwjx"; depends=[]; }; Rsampletrees = derive2 { name="Rsampletrees"; version="0.1"; sha256="02wh99nxlhyrivr655825nqcl3w0mvppnmvc9yrkdbkjw0l1zsjd"; depends=[ape haplo_stats]; }; + Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rserve = derive2 { name="Rserve"; version="1.7-3"; sha256="09rha4p86vak7ss721mwp5bm5ig09xam8zlqv63n9wf36v3kdmpn"; depends=[]; }; RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.2"; sha256="0d5z5dffi2prz0r31x08c8gw83448bhkma5mzcmrdlg6kx5y7dp8"; depends=[fields jpeg RANN]; }; Rsolnp = derive2 { name="Rsolnp"; version="1.16"; sha256="0w7nkj6igr0gi7r7jg950lsx7dj6aipgxi6vbjsf5f5yc9h7fhii"; depends=[truncnorm]; }; - Rsomoclu = derive2 { name="Rsomoclu"; version="1.6"; sha256="105isq1c1spwska886phi7dzp6qzifzvvy1r8gqlbv9v6lbgxshf"; depends=[class kohonen Rcpp]; }; - Rssa = derive2 { name="Rssa"; version="0.13-1"; sha256="1v2gvk7pnzf2s2z0y7shjf0mz558lb6ian7vljkjcag06pyygmvi"; depends=[forecast lattice svd]; }; + Rsomoclu = derive2 { name="Rsomoclu"; version="1.7.2"; sha256="0b063b9jwnn7mansm5mbgqcfk8p596inf7l3r6fafvsjw5844b6l"; depends=[class kohonen Rcpp]; }; + Rssa = derive2 { name="Rssa"; version="0.14"; sha256="0r51jw7fl0nxmly05dj85chw804vf8gmrkfs6yi59zh7fq7jsis6"; depends=[forecast lattice svd]; }; Rsundials = derive2 { name="Rsundials"; version="1.6"; sha256="0vrvxsznbclgls4jljc59lyli6cw9k1a3wapfrs6xbkqi8865iif"; depends=[]; }; - Rsurrogate = derive2 { name="Rsurrogate"; version="1.0"; sha256="0s7f86cf2b3mwzwpfpl8cd1g41c8g5hzkykj9qigy1grnf37crvf"; depends=[]; }; - Rsymphony = derive2 { name="Rsymphony"; version="0.1-21"; sha256="0wjj1wlh45fhgbzfqh0rdxrahc68w1gkvzx6kx46m6ww7k6l3pqb"; depends=[]; }; - Rtsne = derive2 { name="Rtsne"; version="0.10"; sha256="14270gg0fp3imq9rafqj56ld56kzby7yyf5rg9z0wlimm7s72hy5"; depends=[Rcpp]; }; - Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.3"; sha256="16bnhrg86rzi4g4zf235m1g8amyhcwxpw0wgcxynfiinm2fl4y1n"; depends=[]; }; + Rsurrogate = derive2 { name="Rsurrogate"; version="2.0"; sha256="1pjyhlxqi8mcbywa7qa1vxgxr5jca0nc9vm1bx53vr231wgnb7gf"; depends=[survival]; }; + Rsymphony = derive2 { name="Rsymphony"; version="0.1-26"; sha256="0v51sjhggvl8i3ysslqcc4x84874nagxq2v68izs4hpvcpzn7268"; depends=[]; }; + Rtauchen = derive2 { name="Rtauchen"; version="1.0"; sha256="09282k6qsjxgm26682npfjymmbx5g8flcc44awmkjl2k4fa1q9ha"; depends=[]; }; + Rtextrankr = derive2 { name="Rtextrankr"; version="1.0.0"; sha256="16dby3xsfcjyp35xdflmgnh7zkqygfbffvj4jqa565vj9ksnq5ir"; depends=[igraph KoNLP sets stringi]; }; + Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; + Rtsne = derive2 { name="Rtsne"; version="0.11"; sha256="0zi4nxgpiv1gpdmcnqdhz5kymzp8m5xj02zpf290p1yyydl76bhy"; depends=[Rcpp]; }; + Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.4"; sha256="19wcjgcv871vzclgskvb7xywnzvvi9v5k0qhwxwwi3qc9yx2kpaq"; depends=[]; }; Rtts = derive2 { name="Rtts"; version="0.3.3"; sha256="0jphdpnpbq0d48kzflilxlh6psk282hi1hz3rmnwnd0rx5iyg624"; depends=[RCurl]; }; - RtutoR = derive2 { name="RtutoR"; version="0.1"; sha256="1a27kmasrdy06m0gh11pggx46f049f268hn0s651zb1hr8n3h5mi"; depends=[dplyr DT ggplot2 rmarkdown shiny shinydashboard]; }; + RtutoR = derive2 { name="RtutoR"; version="0.3"; sha256="0knqwk44di24x8w2pf794hk2raq7gcpl6cd6s9m0sr73rxh9sf11"; depends=[dplyr DT ggplot2 ggthemes plotly rmarkdown shiny shinyBS shinydashboard shinyjs]; }; Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Ruchardet = derive2 { name="Ruchardet"; version="0.0-3"; sha256="0dgldi6fgp949c3455m9b4q6crqv530jph210xzph41vgw8a2q2v"; depends=[Rcpp]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; Runuran = derive2 { name="Runuran"; version="0.23.0"; sha256="1qkml3n0h1z59085spla0ry1wl42c1ljg9nh2sxv6mnhxygm6aq1"; depends=[]; }; RunuranGUI = derive2 { name="RunuranGUI"; version="0.1"; sha256="0wm91mzgd01qjinj94fr53m0gkxjvx7yjhmwbkrxsjn6mjklq72l"; depends=[cairoDevice gWidgets gWidgetsRGtk2 Runuran rvgtest]; }; - Rvcg = derive2 { name="Rvcg"; version="0.13.1.2"; sha256="1xlf26qzp8x6shcvxa5ka5c0hgbmv2ma1raj2a25ginmq28ld4ms"; depends=[Rcpp RcppEigen]; }; + Rvcg = derive2 { name="Rvcg"; version="0.15"; sha256="0h0gl6s7xa96g91d0df08ssgr1hnxgc1pqrlirvjdknr7jpkq04k"; depends=[Rcpp RcppArmadillo RcppEigen]; }; Rvmmin = derive2 { name="Rvmmin"; version="2013-11.12"; sha256="1ljzydvizbbv0jv5lbfinypkixfy7zsvplisb866f8w45amd152a"; depends=[optextras]; }; Rwave = derive2 { name="Rwave"; version="2.4"; sha256="1ynj6higx0j6iv033lx8h3i9hlg5b53nl2gv6fwjny4ygm8b1mjm"; depends=[]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1"; sha256="0kzngkan9vydibnr3xm4pyz4v6kz0r4h19f0ngqpri07fkhdsxzd"; depends=[]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-3"; sha256="04d6ffl4qs2vjbk0ibvyq17i2l26qnvxr72s6p3f8q4px33rh4kh"; depends=[lattice MASS MCMCpack mvtnorm]; }; - RxODE = derive2 { name="RxODE"; version="0.5-1"; sha256="00s9pb1gx61prbymxdq470s3lv2vd9xdpbp51b0gq3g9kpl7g21i"; depends=[]; }; + RxODE = derive2 { name="RxODE"; version="0.5-5"; sha256="1rh25vjy8pnaavz9df6bcmk9b8d72hxm73n1hg3ha724cyxypzpa"; depends=[]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.1"; sha256="17agz3kw7pj4mpl25y1n8l9lqfj63wn70rqpdkcpnx7j6s6933vx"; depends=[data_table fingerprint rcdk rJava]; }; - Ryacas = derive2 { name="Ryacas"; version="0.2-12.1"; sha256="18dpnr6kj0a8f2jcbj9f6ahd0mg7bm1qm8dcs1wh8kmjl3klr1y8"; depends=[XML]; }; + Ryacas = derive2 { name="Ryacas"; version="0.3-1"; sha256="13qvd5gpdrjgzf6isk3529khd02852y3ajmpp5vl8vn9k1jxp86v"; depends=[Rcpp XML]; }; Rz = derive2 { name="Rz"; version="0.9-1"; sha256="1cpsmfxijrfx06ydpjzbaak7gkad4jjk1ph9453l9zly1cwzgspj"; depends=[foreign formatR ggplot2 memisc psych RGtk2]; }; S2sls = derive2 { name="S2sls"; version="0.1"; sha256="0qq1rff2cdgrm5rj69jxgrl71i0wmzyn424fdvcg02zdv9ggqhd3"; depends=[spanel]; }; - SACCR = derive2 { name="SACCR"; version="1.5"; sha256="101rki50m7kb0h17nrhm5pwjcm1c6ldynili69my1hqkymzwd51x"; depends=[]; }; + SACCR = derive2 { name="SACCR"; version="2.1"; sha256="184mw9q25b06zar4ii3na7c4x28ly922d5csfqkw9b07mdp81k3h"; depends=[data_tree jsonlite Trading]; }; SACOBRA = derive2 { name="SACOBRA"; version="0.7"; sha256="12aj4ghs3i3ks749z0l95ipv8gi33xgggkyjf21zvnzmb1dgphys"; depends=[testit]; }; + SADEG = derive2 { name="SADEG"; version="1.0.0"; sha256="02ilykbdanx1isbd80c43hqpzkckq6dg40y0rklcnck6v96qky3n"; depends=[]; }; SAENET = derive2 { name="SAENET"; version="1.1"; sha256="13mfmmjqbkdr6j48smdlqvb83dkb34kx3i16gx0gmmafk3avdaxx"; depends=[autoencoder neuralnet]; }; SAFD = derive2 { name="SAFD"; version="1.0-1"; sha256="1h9hw66irq2c1ciz502r5h8h9hx32jwhrp9dwl91qlknlj6s1bxr"; depends=[]; }; SAGA = derive2 { name="SAGA"; version="2.0.0"; sha256="022q8hagc38mfakh02cyvf49as2rps1my9iy2xcg8qhrr2czzmy8"; depends=[plotrix viridis]; }; SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; SALTSampler = derive2 { name="SALTSampler"; version="0.1"; sha256="1ys88fgsx92b50x5y8xb0gp03spj0d29nqgw91yl95qwkg0d6bsg"; depends=[lattice]; }; SAM = derive2 { name="SAM"; version="1.0.5"; sha256="1fki43bp6kan6ls2rd6vrp1mcwvz92wzcr7x6sjirbmr03smcypr"; depends=[]; }; + SAMM = derive2 { name="SAMM"; version="0.0.1"; sha256="1yyqci1c0xk5pqi09v3b7p5y0dwbrg1wlsyscfnw6qxwr707y23j"; depends=[Rcpp RcppArmadillo]; }; SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; - SAPP = derive2 { name="SAPP"; version="1.0.4"; sha256="0a86vz390v2g5lz1r33qrmhgvak4rpfmpxy39shnivhagnrsarkl"; depends=[]; }; + SAPP = derive2 { name="SAPP"; version="1.0.7"; sha256="0rms9kq87dypdfs248m4393lgpfx37qah0n1s109pfnjh3k64pm3"; depends=[]; }; + SARP_moodle = derive2 { name="SARP.moodle"; version="0.3.6"; sha256="0mm3dls9w9q060pylrkl3zwzix9zprpljajfm6z8k5bbhha1qsbc"; depends=[]; }; SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; }; SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; }; SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; }; @@ -2258,45 +2773,51 @@ in with self; { SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; - SCBmeanfd = derive2 { name="SCBmeanfd"; version="1.1"; sha256="0pcyrnzlnlyn4v3lyv7pv01v2lh4vig1x4x8g98lpccpi1bimd4z"; depends=[boot KernSmooth]; }; + SCBmeanfd = derive2 { name="SCBmeanfd"; version="1.2.2"; sha256="045498q71zqgcg8p3665vwd99a8ybf21y0sa7y8316zw66wb1caz"; depends=[boot KernSmooth]; }; SCEPtER = derive2 { name="SCEPtER"; version="0.2-1"; sha256="19sphwcsj2z05dvpmz7vgxykzyghkfn79jwqvk6d66daman679mv"; depends=[MASS]; }; SCEPtERbinary = derive2 { name="SCEPtERbinary"; version="0.1-1"; sha256="0rab0widfndx94dn1nchhs06q0d57vq2n3xy79p130l9rgp9v489"; depends=[MASS SCEPtER]; }; SCGLR = derive2 { name="SCGLR"; version="2.0.3"; sha256="03v76nh6ng41hh4lm27r8ipf382sj98dyl9lh4fzl4y6ff1vwzzj"; depends=[expm Formula ggplot2 Matrix pROC scales]; }; - SCI = derive2 { name="SCI"; version="1.0-1"; sha256="1m5a15a4n0zjqykq38pyw9133g2ih4ykbgak8c8khq8p0isnl8qb"; depends=[fitdistrplus lmomco]; }; + SCI = derive2 { name="SCI"; version="1.0-2"; sha256="1jvzkdv15ifgf6a3zjfzzcgw2y2vg0wp7yhiamiaqp8xkm142w49"; depends=[fitdistrplus lmomco]; }; SCMA = derive2 { name="SCMA"; version="1.1.1"; sha256="1jbx4fkixm31zdlfx65xxdzpf77dzpqazy1l6qyjz7q672s2vidd"; depends=[]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; + SCRSELECT = derive2 { name="SCRSELECT"; version="1.1-0"; sha256="1mf11xxzi6g0cs91l6a0b9dic3a737ckxwrrbxk3m2cz6ymy5k9r"; depends=[mvtnorm]; }; SCRT = derive2 { name="SCRT"; version="1.1.1"; sha256="02sndf5r1y27pgkw4wd9bhz7jhzk3cv78hp3xl222phjznjf2lzi"; depends=[]; }; SCVA = derive2 { name="SCVA"; version="1.1.1"; sha256="1n660pml288ia4x18kjbrcx0n1cnasdxhl6pymh1nzxm4ai2hinc"; depends=[]; }; SCperf = derive2 { name="SCperf"; version="1.0"; sha256="1v9l7d9lil2gy5bw6i7bzc24808m063xaw2spl005j0a9rh4ag41"; depends=[]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; + SDEFSR = derive2 { name="SDEFSR"; version="0.7.1.0"; sha256="1pknkda7iaq5247557b93kc3cf2ih7b3wpqpkqyfgfay3ci9kg16"; depends=[]; }; + SDMPlay = derive2 { name="SDMPlay"; version="1.0"; sha256="0pmqn487lvaxbcbx5nz86xpxsbbbiin20havhw6h9j43ly4qic7q"; depends=[dismo gbm ncdf4 raster rgdal SDMTools sp]; }; SDMTools = derive2 { name="SDMTools"; version="1.1-221"; sha256="1kacrpamshv7wz83yn45sfbw4m9c44xrrngzcklnwx8gcxx2knm6"; depends=[R_utils]; }; - SDR = derive2 { name="SDR"; version="0.7.0.0"; sha256="181ify2yypcfqi1ayk1r0xq4xw4r74r6l2b11k0al9wwxa7gy3c5"; depends=[]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; + SDraw = derive2 { name="SDraw"; version="2.1.3"; sha256="179h5byh92dkycchalf875pwq1h4ryg3hba9fs7fbq4dshki5i7p"; depends=[deldir rgeos sp spsurvey]; }; SEAsic = derive2 { name="SEAsic"; version="0.1"; sha256="1mg01sag6n1qldjvmvbasac86s7sbhi4k99kdkav2hdh6n9jg467"; depends=[]; }; SECP = derive2 { name="SECP"; version="0.1-4"; sha256="0a4j0ggrbs0jzcph70hc4f5alln4kdn2mrkp3jbh321a6494kwl1"; depends=[SPSL]; }; SEER2R = derive2 { name="SEER2R"; version="1.0"; sha256="0lk0kkp8sv3nl19zwqd7449mmjxsj3pqpzdmqf70qf8xh2pqyvzd"; depends=[]; }; - SEERaBomb = derive2 { name="SEERaBomb"; version="2015.2"; sha256="1pm49icslhwd6j4xn6y9m7y7prjyn64bfvl5c12r2jkvq05sd6v8"; depends=[DBI dplyr ggplot2 LaF mgcv plyr Rcpp reshape2 rgl RSQLite scales XLConnect]; }; - SEHmodel = derive2 { name="SEHmodel"; version="0.0.11"; sha256="06678bxy4kprzzr2q7pyc3dscar1554bb7fgcgamlkisdzc32q74"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; + SEERaBomb = derive2 { name="SEERaBomb"; version="2016.2"; sha256="0fbgw1xyadqdl8bpf0hydrxjh43z4b0hjdk304fg6igg2v186fp5"; depends=[DBI dplyr ggplot2 LaF mgcv plyr Rcpp reshape2 rgl RSQLite scales XLConnect]; }; SEL = derive2 { name="SEL"; version="1.0-2"; sha256="1nrk0fx6ff330abq8askvp0790xnfv00m3sraqcr32hciw6ks421"; depends=[lattice quadprog]; }; SEMID = derive2 { name="SEMID"; version="0.2"; sha256="1897yjshcbidnrhr575sicsmhzyhjbagv0dp9g3nsv78syb6dr2p"; depends=[igraph]; }; SEMModComp = derive2 { name="SEMModComp"; version="1.0"; sha256="1za67470f13z8jsy3z588c7iiiz993d3vjqrb8v9fann2r6sf1md"; depends=[mvtnorm]; }; SETPath = derive2 { name="SETPath"; version="1.0"; sha256="1dpgmki0dhph13h1fd3mbf308746wccgfz5g5gdm7bwbjnmjzd98"; depends=[]; }; SEchart = derive2 { name="SEchart"; version="0.1"; sha256="19gqcd6xzwg37nzc67p88ip4i0v2f59ds85xfw9qq8lybvdm76k2"; depends=[JM]; }; - SGCS = derive2 { name="SGCS"; version="2.3"; sha256="1c917g03s50mp96lqhkjagsd2cq9rjbprlwf3h409dj59g6k2zx6"; depends=[spatstat]; }; + SGCS = derive2 { name="SGCS"; version="2.5"; sha256="1245xqv8im457zdgcny66jnzv8kyfi8ddic9zdk94sr6jkwx6x17"; depends=[spatstat]; }; SGL = derive2 { name="SGL"; version="1.1"; sha256="1wc430jqn3li102zpfmyyavfbab7x7ww9p89clxsndyigrrbjdr7"; depends=[]; }; - SGP = derive2 { name="SGP"; version="1.5-0.0"; sha256="0c5i28n6q41kksfskcd34199bk1abmwpy3md993aqbgf5bw54b4d"; depends=[Cairo colorspace data_table doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats quantreg randomNames RSQLite sn toOrdinal]; }; - SGPdata = derive2 { name="SGPdata"; version="13.0-0.0"; sha256="11dm2nw7wzd2fbfyjb6a2byyiq1wfnfmlsxys7li6yf3j95d9jw6"; depends=[]; }; - SHELF = derive2 { name="SHELF"; version="1.1.0"; sha256="07r2r75rnlxkp0qxqzp4qcfddnjn2akyzr0v8vblcqrhcyd90y5l"; depends=[ggplot2 shiny]; }; + SGP = derive2 { name="SGP"; version="1.6-0.0"; sha256="02q9kbafnlrwyzrf5xv4lj89ifhmx1gj03jvlrhb9a4g04084w1z"; depends=[Cairo colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats quantreg randomNames RSQLite sn toOrdinal]; }; + SGPdata = derive2 { name="SGPdata"; version="15.0-0.0"; sha256="1mqvrax1sndxbn8rp1hqnkhyfr9nlkz3bl7h2gr27ka3ddz1vv1h"; depends=[data_table]; }; + SHELF = derive2 { name="SHELF"; version="1.2.3"; sha256="1d52a1yci9zq9zl2mkq9ji340jfa47w47br5gpapd84yk9d61llb"; depends=[ggExtra ggplot2 MASS shiny tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; - SIBER = derive2 { name="SIBER"; version="2.0.2"; sha256="1jnrchwpvqk23vacn8dsh8mjqa5fdmvff1vqjc20xy42mdmkhr68"; depends=[hdrcde mnormt rjags]; }; + SHLR = derive2 { name="SHLR"; version="1.0"; sha256="0anj2bfbax8kipn7cgjhr4ijjcipixm9lshafh19qbxag2li1891"; depends=[doParallel FactoMineR foreach geepack kinship2 MASS Matrix stringr]; }; + SIBER = derive2 { name="SIBER"; version="2.1.0"; sha256="0vny2iy5jyffz6fh6a6y4i270c9ndkj0ixh0322lfa45cc6f4m7q"; depends=[hdrcde mnormt rjags]; }; SID = derive2 { name="SID"; version="1.0"; sha256="1446zy4rqbw0lpyhnhyd06dzv238dxpdxgmsk34hqv7g3j7q5h1w"; depends=[igraph Matrix pcalg RBGL]; }; + SIDES = derive2 { name="SIDES"; version="1.10"; sha256="13v4pdsaqah5v92fpc1lmsg5391igdys1l2frrw4432bvgm74rg9"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; SII = derive2 { name="SII"; version="1.0.3"; sha256="1k9mvz6g25qs351c0vx7n5h77kb6k833jrcww14ni59yc9jgvsyg"; depends=[]; }; SIMMS = derive2 { name="SIMMS"; version="1.0.2"; sha256="1phvphk7ir9zw77ycm27y4fin6wyxppsmb1cnm4xc83v1yq7lql4"; depends=[glmnet MASS survival xtable]; }; SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; - SIS = derive2 { name="SIS"; version="0.7-6"; sha256="0514fycicd1n3r86qw4blqv9bj23ak9s131yg5mfbk9q2fv3mx8k"; depends=[glmnet ncvreg survival]; }; - SKAT = derive2 { name="SKAT"; version="1.1.2"; sha256="1q79szh5xf55ibx401gdga3il81h3hf6pi68mah8i8rqpxph2v8z"; depends=[]; }; + SIS = derive2 { name="SIS"; version="0.8-3"; sha256="03hb5bldbpdm84viwx75vhh7zvh8nrn5nv155pb75v76rcsqx79m"; depends=[glmnet ncvreg survival]; }; + SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; + SKAT = derive2 { name="SKAT"; version="1.2.1"; sha256="0i8samw6bwzbwcpdf12b932r46yy2fkqp4dn7a5kk50mzzfphib2"; depends=[]; }; SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; + SLDAssay = derive2 { name="SLDAssay"; version="1.5"; sha256="1klfbvzlddblz6wgp0gb2i2c1bdp44iyl0gi87v9sg7wb3kwilld"; depends=[]; }; SLHD = derive2 { name="SLHD"; version="2.1-1"; sha256="0y3ilxd0phmks8zkmpgw7p5zrkwq4k95h976cwk58pavvhfwj9kb"; depends=[]; }; SLOPE = derive2 { name="SLOPE"; version="0.1.3"; sha256="12naak08qjpn6l1ikqwf17h72zk4b5mppgxx7ks9wmnqy9ylhy3x"; depends=[Rcpp]; }; SMC = derive2 { name="SMC"; version="1.1"; sha256="1r4ajgi785lmpnlxrba0n6phmk1f0mb6b5yqk6hx8gng2w8ggclz"; depends=[]; }; @@ -2305,11 +2826,13 @@ in with self; { SMFI5 = derive2 { name="SMFI5"; version="1.0"; sha256="10qp33l0dig00y9gfhpzqig6dbkjw76ch9pfq64dn4xrdkpq1kx5"; depends=[corpcor ggplot2 reshape]; }; SMIR = derive2 { name="SMIR"; version="0.02"; sha256="02q8m5m8lcfrpi78p3kajkps8wiir3jwyqc54j9vfx8aj6mk1v71"; depends=[]; }; SML = derive2 { name="SML"; version="0.1"; sha256="0pdj7321wy50v5l23hknlm30kp8cfgn072pbbifyp8qzmk0hyd8h"; depends=[glmnet lattice Matrix]; }; + SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; }; SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-2"; sha256="0apmkmsv2fqmxpgq08n9k9dvcknj74s4cpp0myjcd6kibb7g9slq"; depends=[ellipse MASS nlme survival]; }; SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; }; SMVar = derive2 { name="SMVar"; version="1.3.3"; sha256="17wr4lixy3p32gr4jq02d7zsr88yrbddjsvynzdsdrwbxf4mwqhp"; depends=[]; }; SNFtool = derive2 { name="SNFtool"; version="2.2"; sha256="1d84ybsi91mr3ma4jzmr9606hg1q00yg0dn50vkjnyda50igcb1c"; depends=[heatmap_plus]; }; + SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; }; SNPassoc = derive2 { name="SNPassoc"; version="1.9-2"; sha256="113byj8zbg6xyxb1qzm76sqfyk3fap0sd90691zzm1x2pbfnb3mh"; depends=[haplo_stats mvtnorm survival]; }; SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; }; SNPtools = derive2 { name="SNPtools"; version="1.1"; sha256="0l29kiqz4048x7amxx1qzkaw2xnd6lpdsdp5nq3rck9amx2hw64a"; depends=[Biostrings GenomicRanges IRanges Rsamtools]; }; @@ -2318,51 +2841,63 @@ in with self; { SOAR = derive2 { name="SOAR"; version="0.99-11"; sha256="1n38gx5sxpkqfkk4y6vpp6g19b8bs5bisni9wn6311s0csizp86m"; depends=[]; }; SOD = derive2 { name="SOD"; version="1.0"; sha256="0f0rh1qsjzxb3zzr440kvl6fnnj7dvc5apdzs5hpf6xrlfg863pk"; depends=[Rcpp]; }; SODC = derive2 { name="SODC"; version="1.0"; sha256="18s4rcp5dzchvwrzzbfhbs3x91zlg1rymjarxjk5i429mfrn0krx"; depends=[magic MASS ppls psych]; }; + SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; + SOIL = derive2 { name="SOIL"; version="1.0"; sha256="1bx399530cfh7k6p8jw4irar3q1zazvpiqcb0k4q02s2ygx3z5p6"; depends=[brglm glmnet MASS ncvreg]; }; SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; }; - SOMbrero = derive2 { name="SOMbrero"; version="1.1"; sha256="0zl46da2qh290wfk6xgxn67r6da978gi9mlkq83pnzi5ch5dsp0z"; depends=[igraph knitr RColorBrewer scatterplot3d shiny wordcloud]; }; + SOMbrero = derive2 { name="SOMbrero"; version="1.2"; sha256="1pvgxy22rha4nw0kcp8635hw5gl8l6j2c1ylbf5mvqb4c4pzpg09"; depends=[igraph knitr RColorBrewer scatterplot3d shiny wordcloud]; }; SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; }; - SOR = derive2 { name="SOR"; version="0.22"; sha256="1njwlsvdnwxidvwrx18h6h4dhrsdgy0fikkhn20pip42qqwd96gz"; depends=[Matrix]; }; + SOR = derive2 { name="SOR"; version="0.23.0"; sha256="0djmz57g23xpzv6p8i71f3zrsc6xdgqkbcvn5cbx9m78n31ipkm5"; depends=[Matrix]; }; SOUP = derive2 { name="SOUP"; version="1.1"; sha256="0k8nlvl4681cz07xjazprcc0jhknfa5hgr7w1qxxmgrp3sprr8r4"; depends=[tensor]; }; SPA3G = derive2 { name="SPA3G"; version="1.0"; sha256="15f38imwqn1zifym2821q7xysvws9vhlif4g16w0pnvk0wlhyb92"; depends=[]; }; SPACECAP = derive2 { name="SPACECAP"; version="1.1.0"; sha256="11szdq7sqr8ldwz7apbf1dv5mh43rbyb7dkivms58s5623xrq3sm"; depends=[coda]; }; SPARQL = derive2 { name="SPARQL"; version="1.16"; sha256="0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc"; depends=[RCurl XML]; }; SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; + SPAtest = derive2 { name="SPAtest"; version="1.0.0"; sha256="07wc5mf49d65jizx3j4cjlcil758fzi6x688jji80spsapfq9gbn"; depends=[]; }; SPCALDA = derive2 { name="SPCALDA"; version="1.0"; sha256="1bmp2zz0favmpyp0ap8a2r1mg1nlan7zg5cj75drdnfpqlsn5vgl"; depends=[MASS]; }; SPECIES = derive2 { name="SPECIES"; version="1.0"; sha256="0p45llf2wjr467bqr4pbljfank9zz3fm42yl3i0r3jbkxgz0rjf0"; depends=[]; }; + SPEDInstabR = derive2 { name="SPEDInstabR"; version="1.3"; sha256="1yzls6i0v3c44lhdb9d2ydw6abphyjnrx2idxdcp0qqj87fw92l4"; depends=[]; }; SPEI = derive2 { name="SPEI"; version="1.6"; sha256="0mbz4nydnzwypfbi1d9fjy09x6133q096qbfrc913dbidzkvfpqv"; depends=[lmomco]; }; - SPIAssay = derive2 { name="SPIAssay"; version="1.0.0"; sha256="1rwa2iicwdm7z8khlnly0ybrqiisw420anr2pcdd5chxa48h8apg"; depends=[]; }; + SPIAssay = derive2 { name="SPIAssay"; version="1.1.0"; sha256="0y02122lj4v95g62w84jmdjdazfz3rch133aid5sgakj2kv68cvh"; depends=[]; }; + SPIGA = derive2 { name="SPIGA"; version="1.0.0"; sha256="0yd06x5rh1h1s4v9apj43c90rkz8m5kssbny7y5mnw5mr2acds9b"; depends=[GA]; }; SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; }; SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; }; - SPOT = derive2 { name="SPOT"; version="1.0.5543"; sha256="0y8rj0wxy8sdk7si9k11i4pb96vp1q78h48ihs4r7d383zykk827"; depends=[AlgDesign emoa MASS mco randomForest rgl rpart rsm twiddler]; }; + SPOT = derive2 { name="SPOT"; version="1.1.0"; sha256="1f1nafp7v8k50s5x8m5bg6r9sb5ihr08f1x4643jqhxf7fcz2x10"; depends=[AlgDesign emoa MASS mco randomForest rpart rsm]; }; + SPPcomb = derive2 { name="SPPcomb"; version="0.1"; sha256="1kn3pi3c7g7waill1grm382ixbvnc7z8pbgzqd94hxqzgkivhid7"; depends=[nleqslv]; }; SPREDA = derive2 { name="SPREDA"; version="1.0"; sha256="1dyqsra899fd1nbk1b7vkw8gs455c6pbcvzw84q9iri77186xqhv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-8"; sha256="1jg1nfhz8qml1wwqa4d0w7vkdmbgdy5xlfqx0h2pdw2z8iij3xxc"; depends=[]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; + SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQUAREM = derive2 { name="SQUAREM"; version="2014.8-1"; sha256="17fn37da4zslbfq5h4f3dfwyw1dxj5y2rgly3vjl2c4k5bnwxxqw"; depends=[]; }; + SQUAREM = derive2 { name="SQUAREM"; version="2016.8-2"; sha256="1iywv8sj5v0qr5vc0zcs8yqwqrivp0jd45j1g4zkq332c68vvl0k"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; + SSBtools = derive2 { name="SSBtools"; version="0.2.1"; sha256="1cqdmvh9gxyx2yciy0j54v84hl8cayifv368ip5y3k6g1cff6488"; depends=[]; }; SSDM = derive2 { name="SSDM"; version="0.1.1"; sha256="1kg2694l42sbd0glzhvsykfpadmzarc275n88775g03as800vq1w"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard sp spThin]; }; - SSDforR = derive2 { name="SSDforR"; version="1.4.12"; sha256="19rgr69ygbiq1lv3jnm282xn6914gh0rk99vxbgsx8zkc0n6cksy"; depends=[MASS psych TSA TTR]; }; - SSN = derive2 { name="SSN"; version="1.1.7"; sha256="04gc06ic7np50qfyymvn8v1kiiyqpvm2yjxm6zfwbilm90k7ag0c"; depends=[BH igraph lattice maptools MASS RSQLite sp]; }; + SSDforR = derive2 { name="SSDforR"; version="1.4.14"; sha256="13xj3nq4rfi5yih7h5gp01mpjyj6090sy9835p41k89pfdd6g71p"; depends=[MASS psych TSA TTR]; }; + SSL = derive2 { name="SSL"; version="0.1"; sha256="0fy6svf8xfni72bpsg8a5wr8ly46srhfixk8866lrcsp8pb6mqcd"; depends=[caret e1071 klaR NetPreProc proxy Rcpp xgboost]; }; + SSN = derive2 { name="SSN"; version="1.1.8"; sha256="0r5l8yw9zq8ddmyhifl27r13bab7327kwb5grlpfx4yqpp11szyp"; depends=[BH igraph lattice maptools MASS Matrix rgeos RSQLite sp]; }; + SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; SSRMST = derive2 { name="SSRMST"; version="0.1.0"; sha256="05bjc2bmsfykrddch7ynixqsq6z813wvibpwh37223q78xpb8nry"; depends=[survival survRM2]; }; SSrat = derive2 { name="SSrat"; version="1.0"; sha256="1qpsdfdngsgxx3mqgn4avl65w4v5v4jwsh1nnxzfn9iqi9mg4bhi"; depends=[plyr sna]; }; SSsimple = derive2 { name="SSsimple"; version="0.6.4"; sha256="0p7d4hx7mhn5myq8ajcij6hhg79rjxigk5v8z93yfdw4gjcb5wad"; depends=[mvtnorm]; }; STAND = derive2 { name="STAND"; version="2.0"; sha256="07wrpmvk0jjlghvrb37xyai48vgzj0fby8y09qdxsxdlgwqg1f3s"; depends=[survival]; }; STAR = derive2 { name="STAR"; version="0.3-7"; sha256="1g78j4iyh78li1jaa3zz5qv4p41cg0imhmvbfakd34l32ppih4ll"; depends=[codetools gss mgcv R2HTML survival]; }; - STEPCAM = derive2 { name="STEPCAM"; version="1.1.1"; sha256="009hd59hwvkrqq5g4psw3aw7qbdrqdxglkg7iyxhb6mz3lxbzym3"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; + STB = derive2 { name="STB"; version="0.6.3.1"; sha256="0fj1cfxqhijpxl41z799zd7id95jsb84ylrbqzrd1jlp80plyw83"; depends=[Matrix VCA]; }; + STEPCAM = derive2 { name="STEPCAM"; version="1.2"; sha256="03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.1"; sha256="1mysmigksrgkgzz7cng5vn8i7q4marq144dpwww30lisw2jgraiq"; depends=[maptools reshape2 sp spacetime zoo]; }; - STPGA = derive2 { name="STPGA"; version="1.0"; sha256="1kqxzjrxf194n006dr3h5kprb4l7qy8bgm2n6251p0sswpvr70j1"; depends=[]; }; + STPGA = derive2 { name="STPGA"; version="3.0"; sha256="093van0k48x7i7r6g2kzn59x58rpqizkkw99l67agndnij13kck9"; depends=[]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2-2"; sha256="01njc7drq01r3364081dv9gn37vrql52zbrb60gd559f3jshqx3m"; depends=[kernlab MASS]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; }; - SWMPr = derive2 { name="SWMPr"; version="2.1.4"; sha256="0i0cy29rk1n4kdrrb7pdj4l8rlxnsabl9iv1pxb06a0fkwpwwk22"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr maptools oce RColorBrewer reshape2 tictoc tidyr wq XML zoo]; }; + SWMPr = derive2 { name="SWMPr"; version="2.2.0"; sha256="1nq3wc06c7fga9v69fwk3dr348lb127wd9ikb59lgnx2w86g83mk"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.2"; sha256="1m057lhfaf0n35rs3sipia04qgkp04hv7wf7rvnr7bhzic9f4vg3"; depends=[FD mice vegan]; }; Sabermetrics = derive2 { name="Sabermetrics"; version="2.0"; sha256="00axm9wxwzasjrld9nfn1wqzrm2ybm7i6xh6005m9lnkb6qwmvi3"; depends=[XML]; }; - SafeQuant = derive2 { name="SafeQuant"; version="2.2.2"; sha256="1wlvrmn4v81zzk1apdyd8dmfrxrpciqp60m614sbkaymg268d4p4"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; + SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; }; + SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; @@ -2371,160 +2906,203 @@ in with self; { Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; SchemaOnRead = derive2 { name="SchemaOnRead"; version="1.0.2"; sha256="0xa53mqmv31gid6n82bnfmds6p8nkjlmkj15hyycxhja2j752knm"; depends=[caTools foreign haven ncdf4 network readbitmap readODS readxl tiff xml2]; }; SciViews = derive2 { name="SciViews"; version="0.9-5"; sha256="199waafpn0ndg7szwfhw2jlgcx1f0pv7j0vix2vzz60knwm698xb"; depends=[ellipse MASS]; }; - SciencesPo = derive2 { name="SciencesPo"; version="1.3.9"; sha256="1w3skni7q3nab1w09fms9gl3cwkr1dzw62iw2xxq21fm2ipawpc6"; depends=[data_table dplyr ggplot2 gridExtra lazyeval magrittr RSQLite shiny stringr vcd]; }; + SciencesPo = derive2 { name="SciencesPo"; version="1.4.1"; sha256="1y9ymm5h6mmcx1ncl7yq2nn681gm0hd25fgxxwill9bzpy34pdnr"; depends=[data_table ggplot2 htmltools lubridate pander Rcpp rstudioapi shiny stringr xtable]; }; ScoreGGUM = derive2 { name="ScoreGGUM"; version="1.0"; sha256="0f7sjfr3a8b8y1n9lrwyiyyljls3rbz84d9s93psi2fnmjj0kvgw"; depends=[]; }; ScottKnott = derive2 { name="ScottKnott"; version="1.2-5"; sha256="1ywwhdghcy30mp2nhsk2yhgb37nrdmb9yan5vvzsg66bchc3xgll"; depends=[]; }; + ScottKnottESD = derive2 { name="ScottKnottESD"; version="1.1"; sha256="135g575hbxlv4arw7l5miwc094z92ykx49aa3mia1spxj8ldly64"; depends=[effsize reshape2 ScottKnott]; }; ScrabbleScore = derive2 { name="ScrabbleScore"; version="1.0"; sha256="19vgaxnhvqsbllqxfbnhnar2j4g0fkxi7rfsmkks2bd2py81x04m"; depends=[]; }; ScreenClean = derive2 { name="ScreenClean"; version="1.0.1"; sha256="0haanr05g4vwp5apncyzv8i3r61g4xf9ihm8ilcabcgpri56gpjk"; depends=[MASS Matrix quadprog]; }; SearchTrees = derive2 { name="SearchTrees"; version="0.5.2"; sha256="11p81x1klkmxarypxpbisf78dlrmhzzg9y9hxpwz75pks1y56gqg"; depends=[]; }; + SecKW = derive2 { name="SecKW"; version="0.2"; sha256="13x9l6ncx8qszkcr7dpfzrk4zqj4w8z5lwd394437vl4xf1xv0k6"; depends=[fdrtool pracma]; }; SegCorr = derive2 { name="SegCorr"; version="1.1"; sha256="1hfkwfq4s3xm0wip82v000x5axkzkn4vkv6wima4mrnlvwi2yb9k"; depends=[cghseg]; }; - Segmentor3IsBack = derive2 { name="Segmentor3IsBack"; version="1.8"; sha256="00m6fvx6s8mz477c8b4dmgdh52jf6jx1lcqzf84l90b1xw93qnv7"; depends=[]; }; + Segmentor3IsBack = derive2 { name="Segmentor3IsBack"; version="2.0"; sha256="0c7ag9svd1xlm60padg41gvz7qnbcp41kg3cz2dvi9hy2yrqw0qd"; depends=[]; }; Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; }; - SeleMix = derive2 { name="SeleMix"; version="0.9.1"; sha256="04gxgja35qs4k66iil014dzgl5bkx0qhr9w4v7qpmwv2bb07jwz3"; depends=[Ecdat mvtnorm xtable]; }; - SelvarMix = derive2 { name="SelvarMix"; version="1.1"; sha256="0rn6ahqg3yriaf32rn07mdd5aqyqb35xv7v4ydc7q1ym1wmc9zla"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; + SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; }; + Select = derive2 { name="Select"; version="1.1"; sha256="16ih65dfk6s8xkn1mqdn2391x40lzlmfsv46g01ngpsym4dry8dq"; depends=[lattice latticeExtra Rsolnp]; }; + SelvarMix = derive2 { name="SelvarMix"; version="1.2"; sha256="03yhsrfnl32n2dk3gn63vsys5vm5j30zrar1kvhrmckl8qczhqr1"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; + SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.6"; sha256="0dxr0jjj9fivbpwkknsxd8n2z4amszlkb240p66lj10i8bk5bd8f"; depends=[MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.3"; sha256="1qfsy88bd07xk3gy2r7cjcs6fhx9889aqn1494d92msxmc6zvcz7"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.1"; sha256="05gnk4s0d6276rmnyyv6gy1wpkji3sw563n8l7hmi9qqa19ij22w"; depends=[cluster MASS nlme]; }; - SemiParBIVProbit = derive2 { name="SemiParBIVProbit"; version="3.7"; sha256="1wk8r8n957l47s4wa6b6xps87p1h5jylif9m1a16d7a5i0bxjj6m"; depends=[ggplot2 magic matrixStats mgcv survey trust VGAM VineCopula]; }; - SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.3"; sha256="14m3ahhp8xfnm01a0knd7qw2lrd1z3kxfazw8kin8g4dhcvhxwj7"; depends=[copula gamlss_dist magic Matrix mgcv mvtnorm trust VGAM]; }; + SemiParBIVProbit = derive2 { name="SemiParBIVProbit"; version="3.8-1"; sha256="0a69x24dd4chpag2abf1a0jwr3942d3ydb1i370ky6f4ky5w71q9"; depends=[gamlss_dist ggplot2 magic matrixStats mgcv mnormt Rmpfr survey trust VGAM VineCopula]; }; + SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.4"; sha256="0b8dfjrjx7c409mid013wbp5s3wz4q5rh4dcgsla2vin2allv0az"; depends=[copula gamlss_dist magic Matrix matrixStats mgcv mvtnorm trust VGAM VineCopula]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; - SensMixed = derive2 { name="SensMixed"; version="2.0-9"; sha256="15ak95pwnwshgjgp8xpv5y87hbhcx38g4ky7wcjx71pzj2kcxdzj"; depends=[doBy ggplot2 Hmisc lme4 lmerTest plyr reshape2 shiny shinyBS xtable]; }; + SensMixed = derive2 { name="SensMixed"; version="2.0-10"; sha256="0r2lga40xr782n1viyxc4wn9gzgm7g2ick45pfnkgq6m60wx9rfh"; depends=[doBy ggplot2 Hmisc lme4 lmerTest plyr reshape2 shiny shinyBS xtable]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; SensoMineR = derive2 { name="SensoMineR"; version="1.20"; sha256="1qw97cixndg2h29bbpssl0rqag3w8im4nm9964lr7r012y5wdqhx"; depends=[cluster FactoMineR KernSmooth]; }; - SensusR = derive2 { name="SensusR"; version="1.0"; sha256="1b5yrb3iiijr7x0r4ga5dlx6yqqk4bvmh1377655s6c7j36sn1xd"; depends=[jsonlite lubridate plyr rworldmap sp]; }; - SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.0"; sha256="1ypf3gm29vr9vvjx62z96hpcfsygaia9nmi3s71cv22b8p8mxwlx"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags tcltk2 widgetTools]; }; + SensusR = derive2 { name="SensusR"; version="2.0.0"; sha256="1897d9lh3srgg99lnjs77j2yrgskbzp68d04i4pkar6slc6xsmli"; depends=[ggmap ggplot2 jsonlite lubridate plyr sp]; }; + SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; + SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.4"; sha256="0wk40lhx2bjyfl8gcv9g1c3bm7kf3b12pfdb0zk22vcp2flr0mci"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; }; - Sequential = derive2 { name="Sequential"; version="2.0.2"; sha256="1ljrhzr08ynng54szym03gggkw9f6pni54fbkqwgcqja23597f80"; depends=[]; }; - SetMethods = derive2 { name="SetMethods"; version="1.0"; sha256="0zizvrzyk01w4ncazvifmjm4h5zrpsf6n68n11sc8f5kzny9ia48"; depends=[betareg lattice]; }; - SetRank = derive2 { name="SetRank"; version="1.0.1"; sha256="0zh5j6ksaggz46d9j37xpajyxlx7r83bv64yn9gdc6z20slrbch7"; depends=[data_table igraph XML]; }; - ShapeChange = derive2 { name="ShapeChange"; version="1.3"; sha256="0f18z489rmrqyrwlmmv8qra0m65zbbhqkd00zc8sxnmkjn3jlzvw"; depends=[coneproj quadprog]; }; - ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.2"; sha256="0z2drcpnfq78wdcd4zbg4pi0jbfs8jkqqjcmm53bzy7mlm0xm2qj"; depends=[coneproj raster rgdal]; }; + SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; + SequenceAnalysis = derive2 { name="SequenceAnalysis"; version="1.3"; sha256="0jrpq5ryw7rwkv99w0a5p3r0vj8nbzj6adlcsr84d9ffgxafmhif"; depends=[XML]; }; + Sequential = derive2 { name="Sequential"; version="2.3"; sha256="0z0ywrvc81gyk4wl810628gikaiadhbapbvkqf2ihr6n632cbr2z"; depends=[]; }; + SetMethods = derive2 { name="SetMethods"; version="2.0"; sha256="0ya8n4pin8j54gcc2fx99xgcrmnv9rm4r9a32nnylyqk49yj41dv"; depends=[betareg lattice QCA QCAGUI]; }; + SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; + SetTest = derive2 { name="SetTest"; version="0.1.0"; sha256="0b5lkdhaymi3vsx9acdn9jxvqwwsac9lbdr43c44c06gglqlvk47"; depends=[]; }; + ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; + ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; }; + ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; }; SharpeR = derive2 { name="SharpeR"; version="1.1.0"; sha256="0qhvpwv81jznqfzm7xysm051ckv8ilq7zhsysxc7wripnlj01c4m"; depends=[matrixcalc sadists]; }; - ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.1.1"; sha256="1vzsl6y57fri8q4455pbmiidfj91986mv67nr4ikck7f1z82mq38"; depends=[]; }; - Shrinkage = derive2 { name="Shrinkage"; version="1.0"; sha256="1n338zj4a063c8b9wajccp156kwxzirb70j8rppnklkq497plfc5"; depends=[limma multtest PsiHat]; }; + ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.1.0"; sha256="1njnfmysd16bl46wqynzgw32f84yy0vkf8i1flgy19jkrb7q9zy6"; depends=[corrplot CTT deltaPlotR difNLR difR DT ggplot2 gridExtra latticeExtra ltm mirt moments msm nnet psych psychometric reshape2 rmarkdown shiny shinyjs stringr WrightMap]; }; + ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; + ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.1.2"; sha256="1rfmsmqd4gq27scm3f0y7p5ivsmk20cjizfycp3sj8ng0qahjmaq"; depends=[]; }; + SiMRiv = derive2 { name="SiMRiv"; version="0.9.1"; sha256="0aw2x9fgjzs8fiz5gqml333w3yi7k65jz611mbhjh26nvbgq82ls"; depends=[raster]; }; SiZer = derive2 { name="SiZer"; version="0.1-4"; sha256="0kiwvxrfa2b49r2iab5v2aysc2yzk5ck3h41f2hr0vq5pdnz0qy5"; depends=[boot]; }; - SigTree = derive2 { name="SigTree"; version="1.10.3"; sha256="1la63w8kv9q0ci302s0lxdabx70smxxn669blynkhip9r30zjx8h"; depends=[ape phyext2 phylobase phyloseq RColorBrewer]; }; + SigTree = derive2 { name="SigTree"; version="1.10.5"; sha256="1i0zhawv0dl764ciyyr3r4sbql2xhhks2r8vbya10wnzyqipxmmb"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; SightabilityModel = derive2 { name="SightabilityModel"; version="1.3"; sha256="0rgv5735y07yyv5y9c3flzha97ykn34ysmzy6as1z94hqfr4w746"; depends=[]; }; - Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="3.2"; sha256="1rx7bpdcf8h1dn647cwx0j7ss3lajizsnxd0cc9dj37v4g14bgyl"; depends=[rgl scatterplot3d]; }; + SignifReg = derive2 { name="SignifReg"; version="1.0"; sha256="1360892wy0qc6dch3753s4a17l3pcijjmxd34zqvzl9534arlsxd"; depends=[]; }; + Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="3.6"; sha256="0hkh97yi7zpm6d87vapzlwyq7l8dra36wy3brfh6b827535wfg3k"; depends=[MASS rgl scatterplot3d]; }; SimComp = derive2 { name="SimComp"; version="2.2"; sha256="07gmlbwvv07kq3z7gq2jxlank011c0cqh8zwwp4pzf061d3gjdm6"; depends=[mratios multcomp mvtnorm]; }; - SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.4.0"; sha256="0hrkwim582cb22ipy5vv1gp9bszjsqyzyzrwqwgy4247brag26fm"; depends=[evd]; }; - SimDesign = derive2 { name="SimDesign"; version="0.8"; sha256="0sf0ajwhkrq3awa6nig09slj5d0bc18jim7d4vg51i4mygs258mi"; depends=[foreach plyr]; }; + SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.4.2"; sha256="04qs0b7sn170m65176p7gmk03dzm2jjgqknmc8kjab8snlrr3r3k"; depends=[evd]; }; + SimDesign = derive2 { name="SimDesign"; version="1.5"; sha256="00hyignxsy3h4qcr98rwsahahgg3p9xhz6dbpr2hn6ymdaxvddyb"; depends=[foreach pbapply plyr]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; - SimInf = derive2 { name="SimInf"; version="1.0.0"; sha256="0y7f6905k14y6rjz7lzx2s6q4l7fjl25dykha40vddcddc83spnd"; depends=[Matrix]; }; + SimInf = derive2 { name="SimInf"; version="3.0.0"; sha256="0pj99jrkx898rnjijvzcw7xxz0hka767a1b2khwlk5kpja7zx5ax"; depends=[Matrix]; }; + SimPhe = derive2 { name="SimPhe"; version="0.1.1"; sha256="00qqqsf7na5c9nslnfpbyr2ysf7d7bi6vnpfiy761nhg8vgf2vjv"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; - SimReg = derive2 { name="SimReg"; version="1.4"; sha256="0lh2ra9k76zaffdn83an0xkff105iwn9ia3l2m6kijr3kl7ils38"; depends=[ontologyIndex ontologyPlot ontologySimilarity plotrix Rcpp]; }; + SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; + SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; SimilarityMeasures = derive2 { name="SimilarityMeasures"; version="1.4"; sha256="1w4klcln4hy9vcik9csg7b3b8kk4raxgckwfrhqg089d80xbqsxj"; depends=[]; }; Simile = derive2 { name="Simile"; version="1.3.3"; sha256="1izyjp18m1inac3svkf59z3lddrv44m7pdkhisgkr987xs8gdch4"; depends=[]; }; SimpleTable = derive2 { name="SimpleTable"; version="0.1-2"; sha256="1rkybrp7zlb7cj37799npss1ldic0yf519q5l7a6ikal4yl1afyb"; depends=[hdrcde locfit MCMCpack]; }; - SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.1"; sha256="1zxbrpsc96rhgnv5zcl2zgfmk7y6jshwnchh5dl1d3agqy36509r"; depends=[]; }; + SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.2"; sha256="1g7i31naczqf1hxmk1h5y9gq36rdfhf4al9xvwjgi9bj9zhfg3qp"; depends=[]; }; Simpsons = derive2 { name="Simpsons"; version="0.1.0"; sha256="1pm6wga1yxc35zgz72plzq23d3l4bbzfdvhszdxmkn1pkk64h8ms"; depends=[mclust]; }; SimuChemPC = derive2 { name="SimuChemPC"; version="1.3"; sha256="06sxknaykikcgbw7qbbw1risg0sbaisb68vhfd7cl6sg0327dznk"; depends=[rcdk]; }; SimultAnR = derive2 { name="SimultAnR"; version="1.1"; sha256="0jvmxwmbnx14h27b576dg9mw3c2z0w3m82f51f25zd1darcl06bj"; depends=[]; }; - SixSigma = derive2 { name="SixSigma"; version="0.9-2"; sha256="127q556amd40h636av71xv8vh7qn0kmax8yhvw1l5pfq2h3ms1s1"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; + SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; + SixSigma = derive2 { name="SixSigma"; version="0.9-3"; sha256="04d09w1h6aq3j245gbj8cx7dsr88n4np6i751k9sx7lfx6al3w50"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; + SizeEstimation = derive2 { name="SizeEstimation"; version="1.1.1"; sha256="1rz57y76hzp880511kzm7nhxf201n0dr7ccip6slrjz784dl7s27"; depends=[MCMCpack msm]; }; SkewHyperbolic = derive2 { name="SkewHyperbolic"; version="0.3-2"; sha256="10vilra5z884xinqkvk7ryi4nsq5zxlyn5qh23lsajba3b3qwhaw"; depends=[DistributionUtils GeneralizedHyperbolic RUnit]; }; Skillings_Mack = derive2 { name="Skillings.Mack"; version="1.10"; sha256="0zxqiw87avw2rb2acj7mvpyfkf7iwnkshg73ib74y5ml9awmg2mw"; depends=[MASS matrixcalc]; }; Sky = derive2 { name="Sky"; version="1.0"; sha256="02vjdggvanzsjx7ihxskapp5d5dlyalj02122wmarj8qf1ha1i2m"; depends=[EBImage]; }; - Sleuth2 = derive2 { name="Sleuth2"; version="2.0-3"; sha256="030wq178b7s9grdj3a65lplxv1p84m84yf9x4dild392p812199c"; depends=[]; }; - Sleuth3 = derive2 { name="Sleuth3"; version="1.0-1"; sha256="0vy7b69f5y3ahbgi8c2lr42xhz4h0z7zcyrai42050snjmwrxb1l"; depends=[]; }; - SmarterPoland = derive2 { name="SmarterPoland"; version="1.5"; sha256="0qa31z0wgl8bgc3ihgbfdmp1ang3wyy4qylj81zxh1yn2zxx5fr0"; depends=[ggplot2 htmltools httr rjson]; }; + SkyWatchr = derive2 { name="SkyWatchr"; version="0.5-1"; sha256="0mza2r80wsa091ry0rcx9x29k9v0kfk4gnafmpw6pah3bgpd2lk8"; depends=[htmlTable httr sp]; }; + Sleuth2 = derive2 { name="Sleuth2"; version="2.0-4"; sha256="18mh1svmb96hw3rjmgxlwzs7kdcvjkxf4zm8k4w0sxz94ks062i7"; depends=[]; }; + Sleuth3 = derive2 { name="Sleuth3"; version="1.0-2"; sha256="0b4g7j8a204wyvh0q9n1l4zrl9rk7ibyfijd49mjjdyg9zz4kbna"; depends=[]; }; + SmartSVA = derive2 { name="SmartSVA"; version="0.1.1"; sha256="1c35y20llycxs41pkjmb7b74cmspmcwwi98r8r5q6s1vgbzn96zr"; depends=[isva Rcpp RcppEigen sva]; }; + SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; + SmarterPoland = derive2 { name="SmarterPoland"; version="1.7"; sha256="03vs6hcd96va9kfhl2yq77alnm33j1dxy79kgrx17hlijsy65qqv"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; + Smisc = derive2 { name="Smisc"; version="0.3.6"; sha256="0knrgq6831rwr48880kvsmrl6c943nw3nkzds0sh63ljw0dp5ja7"; depends=[doParallel plyr]; }; SmithWilsonYieldCurve = derive2 { name="SmithWilsonYieldCurve"; version="1.0.1"; sha256="0qvhd1dn2wm9gzyp6k7iq057xqpkngkb4cfmvmjqmf0vhysp371w"; depends=[]; }; SmoothHazard = derive2 { name="SmoothHazard"; version="1.2.3"; sha256="0p6hnq782d5qwmq6ak2rmbzx84lrsy02lr303gg3y0vln5i2myyn"; depends=[lava mvtnorm prodlim]; }; + SnakeCharmR = derive2 { name="SnakeCharmR"; version="1.0.4"; sha256="06wzyjpzqclf794lapr67g8qrk9y253gksidpcgn8fmfz5443mrp"; depends=[jsonlite Rcpp stringr]; }; SnowballC = derive2 { name="SnowballC"; version="0.5.1"; sha256="0kbg33hy6m2hv9jspyx6naqmk2q6h2zmvvczjmkwqvlhzlj0c5s4"; depends=[]; }; SoDA = derive2 { name="SoDA"; version="1.0-6"; sha256="0sh2dan4ga2k14rirnkvgzsvbksx1k4ika5gkf5cy247rjkqnpj0"; depends=[]; }; - SocialMediaLab = derive2 { name="SocialMediaLab"; version="0.19.0"; sha256="1zskfncg3dqg7bcw7ck33xqz5w05sz0xi4ajfalzzsmr1sbmh6wj"; depends=[bitops data_table Hmisc httpuv httr igraph instaR plyr RCurl Rfacebook rjson stringr tm twitteR]; }; - SocialMediaMineR = derive2 { name="SocialMediaMineR"; version="0.3"; sha256="10208x0173glbb53997qa8fm57qpqzkwh0d42wk9izdb0k8l2fd1"; depends=[httr jsonlite RCurl]; }; + SocialMediaLab = derive2 { name="SocialMediaLab"; version="0.23.0"; sha256="1a62yklhyvcgsw50yg8r9cvdj54pi9ckzg0ms6v7zdbcd0k0nfbm"; depends=[bitops data_table Hmisc httpuv httr igraph instaR plyr RCurl Rfacebook rjson stringr tm twitteR]; }; + SocialMediaMineR = derive2 { name="SocialMediaMineR"; version="0.4"; sha256="0hd05rm7qn2w8rqx7pw996wpgb2rymcwzmns8xyczcyn81vjx8z8"; depends=[httr jsonlite RCurl]; }; SocialNetworks = derive2 { name="SocialNetworks"; version="1.1"; sha256="0d868xka6d35i17r28cvm0ya971xk6y1kycsfff0279w27cjd9x0"; depends=[Rcpp]; }; SocialPosition = derive2 { name="SocialPosition"; version="1.0.1"; sha256="1rrrjlq6czzhzipvkisbq024ca22v2vzx7wa4ddr9j7hnyyzzpic"; depends=[]; }; - Sofi = derive2 { name="Sofi"; version="0.0.26"; sha256="0jcnwy308h8qdswapdqpphdx5757a4a6bmrdmyzh0ny52a4w07n1"; depends=[foreign sampling shiny]; }; + Sofi = derive2 { name="Sofi"; version="0.16.4.8"; sha256="0h9ir0xrwmsabfhwsr9hbpwabh1fsb3p51y8qcgm92iyvc6dl3mf"; depends=[foreign sampling shiny]; }; SoftClustering = derive2 { name="SoftClustering"; version="1.1502"; sha256="1pgg9mjpfw55m3ny726vx5wl8gwsdkrxv8xzgmy3aqdlwzhh4bwz"; depends=[]; }; SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; }; SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; - SoyNAM = derive2 { name="SoyNAM"; version="1.2"; sha256="0y6iarjn1jiv5rscrszc1fg5m0jdhi5w5qwv4b0bvnh42hjb5rzb"; depends=[lme4 NAM reshape2]; }; - SpaDES = derive2 { name="SpaDES"; version="1.1.1"; sha256="0d09z7plh1sc331b9r6klxq0k587x882sm9g6imdggzyq1m990l7"; depends=[archivist CircStats data_table DiagrammeR digest dplyr ff ffbase fpCompare ggplot2 gridBase httr igraph lazyeval lubridate R_utils RandomFields raster secr sp stringi stringr]; }; + SoyNAM = derive2 { name="SoyNAM"; version="1.3"; sha256="128iq8rrj6nm8zdqrv17gsjxzdsfashgzk1k7lnw38w04a2g05zs"; depends=[lme4 NAM reshape2]; }; + SpATS = derive2 { name="SpATS"; version="1.0-5"; sha256="0nxv6mnbwd1a9yh883dqhcz6qnjznqc7q6c43s23lggj9wmjlzwj"; depends=[data_table fields plot3Drgl spam]; }; + SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; + SpaDES = derive2 { name="SpaDES"; version="1.3.1"; sha256="0a2s0smd0m3dmrjl88hm7dnkv6src96v00bhllc42sq6vq81iwsf"; depends=[archivist chron CircStats data_table DEoptim DiagrammeR digest dplyr DT ff ffbase fpCompare ggplot2 gridBase httr igraph lazyeval lubridate miniUI R_utils RandomFields raster RColorBrewer rstudioapi shiny sp stringi stringr]; }; + SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; }; + SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; }; SparseGrid = derive2 { name="SparseGrid"; version="0.8.2"; sha256="057xbj2bhjm9i32kn39iscnqqdsvsmq0b8c92l8hnf9avf1sx10x"; depends=[]; }; SparseLearner = derive2 { name="SparseLearner"; version="1.0-2"; sha256="1qxycxpch2m2yyk97210gdzsizhlinc0hkhk5ak00rdgkrsxxc0k"; depends=[glmnet lqa mlbench qgraph RankAggreg SIS SiZer]; }; - SparseM = derive2 { name="SparseM"; version="1.7"; sha256="0s9kab5khk7daqf6nfp1wm1qnhkssnnwnymisfwyk3kz4q5maqfz"; depends=[]; }; - SparseTSCGM = derive2 { name="SparseTSCGM"; version="2.2"; sha256="0a1iscn4l587hn582hx4v8fawn6d9gg1m173fc0bsfpkyckgq8hx"; depends=[abind flare glasso longitudinal MASS mvtnorm network]; }; - SpatPCA = derive2 { name="SpatPCA"; version="1.1.1.0"; sha256="0k9y4lm8ixvb571vab9lj3yblqshyb0p848dcc1g7jxibxwv4245"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + SparseM = derive2 { name="SparseM"; version="1.74"; sha256="1fpfhld887y5lyb8jydprmv5krqm1fk6n53z942b4g4z1v4g04j7"; depends=[]; }; + SparseTSCGM = derive2 { name="SparseTSCGM"; version="2.5"; sha256="004hbk5fdd5b5hdvg25wl1908pfya26brm2pz00zypfvis99lps3"; depends=[abind flare glasso longitudinal MASS mvtnorm network QUIC]; }; + SpatMCA = derive2 { name="SpatMCA"; version="1.0.0.1"; sha256="06l2ayjwawjp1kap76jqbnbjhx7x27z7vfn5jd0pz4g764krpfdr"; depends=[fields Rcpp RcppArmadillo RcppParallel]; }; + SpatPCA = derive2 { name="SpatPCA"; version="1.1.1.1"; sha256="0yk6sisl07wqrl16mzk6ch7567l87qrqlnzg976zq2s58cd6y3vh"; depends=[Rcpp RcppArmadillo RcppParallel]; }; SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.2"; sha256="172i4khjb2fh818bq7wdfdm79fwxjwi60nqfj69dgbgcaww55ffr"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; }; SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-2"; sha256="0ywybk9gziy2hzb1ks88q4rzs3lzzy6y3fzhja2s39ngg195hi6l"; depends=[fields maps]; }; SpatialNP = derive2 { name="SpatialNP"; version="1.1-1"; sha256="108gxk0gbbjck9bgxvqb9h216ww21lmh2by0hrhzwx5r63hhcbmd"; depends=[]; }; SpatialPack = derive2 { name="SpatialPack"; version="0.2-3"; sha256="1gs0x3wj3hj663m6kszwhy3ibcx0lrslr127miy1rhz8683ij71c"; depends=[]; }; - SpatialPosition = derive2 { name="SpatialPosition"; version="1.1"; sha256="07lcn2xq6aan4n7kdldzy5sbdl1jsab7j4zz7fvplr1n2hh41m03"; depends=[raster sp]; }; + SpatialPosition = derive2 { name="SpatialPosition"; version="1.1.1"; sha256="1fbch16qmp8xnlkl7crydn1rh5gj49zlii6c9va5l7zp5wf8cl87"; depends=[raster rgdal rgeos sp]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.2"; sha256="0n8l4k0dm9gwirhxwrajv5gx502px9qzlqi6skzx0k32hmymnazh"; depends=[Rcpp RcppArmadillo spBayes]; }; - SpatialVx = derive2 { name="SpatialVx"; version="0.4"; sha256="1kll0q9rkdwd4b003w2967jyz4yan1ypb0f9biwm2jjxxdqy058d"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; + SpatialVx = derive2 { name="SpatialVx"; version="0.6"; sha256="1zjjdhfancjliz0pa0rdfbf26wdci1v3krb42bd99kb4crrk9291"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; SpatioTemporal = derive2 { name="SpatioTemporal"; version="1.1.7"; sha256="0rc5zf8cnjw59azgqmslfz2dl5i17dfmb7ls5c849qybp2gn2zdv"; depends=[MASS Matrix]; }; SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.2"; sha256="1hwlyjpgzf2wgigbc49xcqhf6rzrjzkbriwa4i9gwpa0bnrs4wp1"; depends=[gsubfn splancs]; }; - SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.1"; sha256="0wl15k00d7n9pmnp1kr28p05z4vrziprcdndw77kwkcgv51cvllk"; depends=[MASS numDeriv]; }; - SpecsVerification = derive2 { name="SpecsVerification"; version="0.4-1"; sha256="0ps1v5vp5ksi0xrykdizjkkylzsacdczbpncdj9d6khmbvvqi15p"; depends=[]; }; + SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; }; + SpecsVerification = derive2 { name="SpecsVerification"; version="0.5-0"; sha256="02mwl7kv784wdf3v6f15vbjd8sa1mh8ms11k19bjj3qci9xnx4jw"; depends=[Rcpp RcppArmadillo]; }; + SpectralMap = derive2 { name="SpectralMap"; version="1.0"; sha256="15689023k9jzg3s7bx5m97dmn00z876amqhxsxksy8n8wf09wr57"; depends=[fields scatterplot3d]; }; SpherWave = derive2 { name="SpherWave"; version="1.2.2"; sha256="1wd9pql97m1zl0axzpkfq9sxadrm5cfax0gxh0ncqadaq7w7lml4"; depends=[fields]; }; - SphericalCubature = derive2 { name="SphericalCubature"; version="1.0.1"; sha256="0j592zvs07yc6amahlxgdw0k1vqr89gvcq22vcwzkx62igvlf6pv"; depends=[cubature]; }; + SphericalCubature = derive2 { name="SphericalCubature"; version="1.3"; sha256="195is72nj1vbhdx3yqmklmc9hqaaxvipgmcxszgvnqdv5bsiypgw"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; + SqlRender = derive2 { name="SqlRender"; version="1.2.0"; sha256="1ijp29skqpb9c1h3a3qby9511qfnawsbz8bg6kdl9cclww7a90ij"; depends=[rJava]; }; StAMPP = derive2 { name="StAMPP"; version="1.4"; sha256="0rmp5l50dkkldq9xc1abhdxjhbwlqk3i3g0d8w3xissidnz5n31b"; depends=[adegenet doParallel foreach pegas]; }; StMoMo = derive2 { name="StMoMo"; version="0.3.1"; sha256="0ly1bznixw4qbnag56xykj8gnfrzhqh5blsii32paalk0n920mrm"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; StMoSim = derive2 { name="StMoSim"; version="3.0"; sha256="18mdgpn0x6338zzvc7nwccz6ypqmlpv7pzcy5fwx5y2wfkmdp4rm"; depends=[Rcpp RcppParallel]; }; - StableEstim = derive2 { name="StableEstim"; version="2.0"; sha256="080khfix88j4656hmdy9l0xpbk9zzw7z7d7f6yvwsbalk3ag18i5"; depends=[fBasics MASS Matrix numDeriv stabledist testthat xtable]; }; + StVAR = derive2 { name="StVAR"; version="1.1"; sha256="0wz5f5i9927fs1s8yczwqs022k912220m28l1sv5f0r081iv656i"; depends=[ADGofTest matlab MCMCpack numDeriv]; }; + StableEstim = derive2 { name="StableEstim"; version="2.1"; sha256="0agi3bfp1xy5pfxxb9ib6xn434agmplgn7kg47nhbh47vf57vang"; depends=[fBasics MASS Matrix numDeriv stabledist testthat xtable]; }; Stack = derive2 { name="Stack"; version="2.0-1"; sha256="09fgfhw9grxnpl5yg05p9gvlz38iw4prns1jn14nj3qx01k5rnxb"; depends=[bit ff ffbase plyr stringr]; }; - StanHeaders = derive2 { name="StanHeaders"; version="2.9.0"; sha256="0hpshkf688qgrrclvpy23waa8ijlxzr51frpzhbj0igwykqjpwji"; depends=[]; }; + StagedChoiceSplineMix = derive2 { name="StagedChoiceSplineMix"; version="1.0.0"; sha256="1008gm6zv5k8lpv0qg42qjriajmx0n4kshjh76mvx91dpi788ivh"; depends=[plyr]; }; + StanHeaders = derive2 { name="StanHeaders"; version="2.14.0-1"; sha256="18x23a7nmj5497g3i6a01cv5g34p0xdkb6srf9nwisbhshz25mxl"; depends=[]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; Stat2Data = derive2 { name="Stat2Data"; version="1.6"; sha256="0pk68ffc6ffpddfpf9wi8ch39h6k3r80kldld3z5pnql18rc8nvx"; depends=[]; }; StatDA = derive2 { name="StatDA"; version="1.6.9"; sha256="01bjygis14b3yfsfkjbvy0zlhjxysjf46cfcw8p4a4lwik3qp03b"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat xtable]; }; StatDataML = derive2 { name="StatDataML"; version="1.0-26"; sha256="1lcckapbhqdbg6alnhm2yls66lnkxnxamdlzx6pbfqv1dhsy36gf"; depends=[XML]; }; - StatMatch = derive2 { name="StatMatch"; version="1.2.4"; sha256="0h5b26qqjpxr9bzrbhmbla24dh3ni4z531951aa1frjvi8krv18r"; depends=[clue lpSolve proxy RANN survey]; }; + StatMatch = derive2 { name="StatMatch"; version="1.2.5"; sha256="1162yqqrxkbpchdxdibpk5ccv55krvh9j150jgr047zzghr9ansa"; depends=[clue lpSolve proxy RANN survey]; }; StatMeasures = derive2 { name="StatMeasures"; version="1.0"; sha256="1bnbz803xx8kqhy1cx545b35si6f10za0mp5z82qfvd4kv9a9izz"; depends=[data_table]; }; StatMethRank = derive2 { name="StatMethRank"; version="1.3"; sha256="1jn7xg6f78lhpcd1b2bvjm90yws52klqz625lkwvwfmchwqrxi0i"; depends=[MASS pmr Rcpp rjags]; }; StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; }; - Statomica = derive2 { name="Statomica"; version="1.0"; sha256="0x60n1d7wxfd013k6jjzvfi2mqgr52fd8ylk3yhm3907002jnh1g"; depends=[Biobase distr fBasics multtest]; }; SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; - StereoMorph = derive2 { name="StereoMorph"; version="1.5"; sha256="1y9mflfpysri4abghvp550m1p0r33k75n6q01wihbip157iqf9pz"; depends=[bezier jpeg png Rcpp rjson shiny svgViewR tiff]; }; + StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; + StereoMorph = derive2 { name="StereoMorph"; version="1.6"; sha256="17c8r50i9wlvsq6gha56a4mhq84cmqm82j98zg4lb96jpydcp4dr"; depends=[bezier jpeg png Rcpp rjson shiny svgViewR tiff]; }; StockChina = derive2 { name="StockChina"; version="0.3.1"; sha256="1myxyfchnkskyqb5yciw1wfk3006f51y89ipzfjzdlfyzwy1lsp1"; depends=[]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; StrainRanking = derive2 { name="StrainRanking"; version="1.1"; sha256="0q6k90if74320mrs2ccq2izynylr8zakciwbc2c6ms0v57aalwic"; depends=[]; }; - StratSel = derive2 { name="StratSel"; version="1.1"; sha256="0l08v71qmd170027y5vjnvgfm8kqvgaqrpms9msxhv8g5974kla8"; depends=[Formula MASS memisc mnormt]; }; - StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.1"; sha256="1r9p6awf3a2d08w9rdlggkwlfhksn14xbhdhdnmxz79ym5mgdd8f"; depends=[chron maptools zoo]; }; - StressStrength = derive2 { name="StressStrength"; version="1.0.1"; sha256="15sgdisgz8zcq4i9z4zm7isr5ckyd7bk6yl1g7a5kngams282ipx"; depends=[]; }; + StratSel = derive2 { name="StratSel"; version="1.2"; sha256="11dkhyh0xgl23f9ksxcjl6bqfhwm6k6i1chgx23dvjifbm6s5s5p"; depends=[Formula MASS memisc mnormt pbivnorm]; }; + Strategy = derive2 { name="Strategy"; version="1.0.0"; sha256="1s89rl6h68sn8px3g7bhhrwmn6k4kmdqhiz0d39xr3kgpfpvi5i2"; depends=[xts zoo]; }; + StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.2.0"; sha256="0iwzvschncb2vrmsawb6i94shn2cjbkph854x1z4ykr6ddw411g2"; depends=[plyr]; }; + StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; + StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; }; + StroupGLMM = derive2 { name="StroupGLMM"; version="0.1.0"; sha256="1w0xizdmwqflfhqwygyq7fw5ci7pdzmr8dfv3j0g3ljbj84kndzd"; depends=[aod broom car ggplot2 lme4 lmerTest lsmeans MASS mutoss nlme pbkrtest phia survey]; }; + StructFDR = derive2 { name="StructFDR"; version="1.0"; sha256="13f9y6l7pcjmgyvhhk7qcl6k4j0krmg5m2bn3faq5ijpasw7m56x"; depends=[ape cluster nlme]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; SubLasso = derive2 { name="SubLasso"; version="1.0"; sha256="12m7ynlqhikjhavd12bhsd04s9cpv8aq5xgm875i10mb3ldpd1bd"; depends=[glmnet gplots psych]; }; + SubVis = derive2 { name="SubVis"; version="2.0.1"; sha256="1r9i27hx8xj8f3mhbm8ygcxwpq1lzxm26vay5mqk4q9swskg1vbh"; depends=[Biostrings shiny]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; }; SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; SuperExactTest = derive2 { name="SuperExactTest"; version="0.99.2"; sha256="0z9yhaz81l30i7ahjz1gxl7x4c0dqyny8ynpckjm8vwsvpr9y9yf"; depends=[]; }; - SuperLearner = derive2 { name="SuperLearner"; version="2.0-19"; sha256="0dp4gqhvksw83asnbf46yd4z1yr1x4yd6b9c8gqjxkwp7bd0kgwb"; depends=[cvAUC nnls]; }; - SuppDists = derive2 { name="SuppDists"; version="1.1-9.2"; sha256="0pkn1jf94hpilpxh82g0llhk4kdrx0zgvczxx3k24z25m6f5kk7h"; depends=[]; }; - Surrogate = derive2 { name="Surrogate"; version="0.1-69"; sha256="04r1zbw8zxbzwfh73s48hpvvbd34073xgmqkpsg2g9xyg9ispzn8"; depends=[lattice latticeExtra lme4 logistf MASS msm nlme OrdinalLogisticBiplot rgl rms survival]; }; + SuperLearner = derive2 { name="SuperLearner"; version="2.0-21"; sha256="0j349yv510s1qjkpks24qrfgr2bip1m70i5dh9ydlna280k43dbh"; depends=[cvAUC nnls]; }; + SuperRanker = derive2 { name="SuperRanker"; version="1.0.1"; sha256="0s5d38xaan4jznb3nlr9rj054haf6wks0229lggykj8mfz746wky"; depends=[prodlim Rcpp]; }; + SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; }; + Surrogate = derive2 { name="Surrogate"; version="0.1-79"; sha256="1ilh9w6v73aafsxcanhdjz2whsng2vyhkv240smmqifcl93kl208"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; + SurvDisc = derive2 { name="SurvDisc"; version="0.1.0"; sha256="0iqjimrljh9iaw3s406v6j03xg62ysf9xdia1yxr2ray38j8148c"; depends=[cubature MASS mvtnorm nlme simex survival]; }; SurvLong = derive2 { name="SurvLong"; version="1.0"; sha256="000ywg0sdk9kailiy7ckhq4mkaawl9hh88w6apj5khgpxsyj8aw3"; depends=[]; }; SurvRank = derive2 { name="SurvRank"; version="0.1"; sha256="1i08yjprzd9irs46rifa5fsmmhwbsf4py0m8qp5rprznyr8504y3"; depends=[doParallel foreach ggplot2 glmnet gplots ipred mboost randomForestSRC reshape rpart sampling survAUC survival]; }; SurvRegCensCov = derive2 { name="SurvRegCensCov"; version="1.4"; sha256="0ipr7lajnrklk963lrlgx946l6r191q3bfif4njkdmw0x797nzm2"; depends=[numDeriv survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; - SwarmSVM = derive2 { name="SwarmSVM"; version="0.1"; sha256="10gsasllycnmgaf5xq44ph5x7ajh38cnfd97x4hyc6bk4wz7p42r"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; - SweaveListingUtils = derive2 { name="SweaveListingUtils"; version="0.6.2"; sha256="0n15gkiil9rlb0dhnkfimhcs09av35b7qx79iba7bx3y7spvzaqy"; depends=[startupmsg]; }; + SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-2"; sha256="1997nbczgf5xkvj257fa211wxl85lq4jpybjl2q4hajn05ahq7yp"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; + SweaveListingUtils = derive2 { name="SweaveListingUtils"; version="0.7.5"; sha256="0b975il4pfnxw709ar74w49k18b6znrjrm71vw6xl0qid8xwqpfa"; depends=[startupmsg]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.4"; sha256="1avc32q7nbwjkcbml7z05car6khv1ghcz3miw0krm8i53w032c6f"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SyncMove = derive2 { name="SyncMove"; version="0.1-0"; sha256="1jlnsj5v8y5pijfkww7ng7nkwvj93naw29wcxxj130ww5qk7qk1z"; depends=[]; }; + SyncRNG = derive2 { name="SyncRNG"; version="1.2.1"; sha256="0360pdx2p8a6519y3ik5xfdm2yxndyl31p3bb73nj4ihmr4w6lmj"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; SynergizeR = derive2 { name="SynergizeR"; version="0.2"; sha256="0z32ylrjjvp8kr6lghhg57yq1laf9r0h8l3adysvis8bbpz2q2sj"; depends=[RCurl RJSONIO]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; - TAM = derive2 { name="TAM"; version="1.17-0"; sha256="1xi5i79s7wrsfds3pn1lzla82qnb8miw8jlb94h6iyy9qr1xgr95"; depends=[CDM GPArotation lattice lavaan MASS msm mvtnorm plyr psych Rcpp RcppArmadillo sfsmisc tensor WrightMap]; }; + T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; + TAM = derive2 { name="TAM"; version="1.99993-0"; sha256="1n5xs7s1rkn4y0317pkzg1dwdf7r5fm8wkaf0d3jvrz80g6cqbin"; depends=[CDM GPArotation lattice lavaan MASS msm mvtnorm plyr psych Rcpp RcppArmadillo sfsmisc tensor WrightMap]; }; + TANDEM = derive2 { name="TANDEM"; version="1.0.0"; sha256="1zrx5zbfz0zrw46iziqnb11m75ri75dw1x88fd2dhw22am3q2940"; depends=[glmnet Matrix]; }; TANOVA = derive2 { name="TANOVA"; version="1.0.0"; sha256="0c2mrahchwagisrkjl5l1s0mv0ny80kngq8dz0fjj9lwxwqwvwa5"; depends=[MASS]; }; - TAQMNGR = derive2 { name="TAQMNGR"; version="2015.2-1"; sha256="0j7qb15xy4g4ff0cmyjyz4lsalaxxf6zdwbq49j3y80ld0pvwhbk"; depends=[Rcpp]; }; + TAQMNGR = derive2 { name="TAQMNGR"; version="2016.12-1"; sha256="1b3v30zi6ssac866grhgki2bpzbk06pd8vrfya3zcc5anry699bm"; depends=[Rcpp]; }; TBEST = derive2 { name="TBEST"; version="5.0"; sha256="15piy507vv8x59xgga17splxszy0vm87qjbfgxycvba633jishsa"; depends=[fdrtool signal]; }; - TBSSurvival = derive2 { name="TBSSurvival"; version="1.2"; sha256="12ipgffympqjjg8l9gbich5pgz0pqr5g07b0il26rr721xiyxk5v"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; + TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; }; - TDA = derive2 { name="TDA"; version="1.4.1"; sha256="1nl7scnqb0qdpqjl259f6v3i8bqnh0a95a5navs7jlphlak0w6k9"; depends=[BH FNN igraph Rcpp scales]; }; + TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; }; + TDA = derive2 { name="TDA"; version="1.5"; sha256="0rp41v0ihwan34bgb8bgzva5nk7lra0agfr9201ww6687mwakk9z"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; }; - TDMR = derive2 { name="TDMR"; version="1.3"; sha256="0bbd2an18ayxaxprsjqrybb877lkk74dpxbvbv7qdwc1ivqm8g96"; depends=[adabag SPOT testit twiddler]; }; - TDboost = derive2 { name="TDboost"; version="1.1"; sha256="1pyqssqxkr9bwyz4h1l5isbb78asmvddy20vyxq8snxra2r06hbf"; depends=[lattice]; }; + TDMR = derive2 { name="TDMR"; version="1.4"; sha256="1vaa75bazpk6fa34cahc597ifs307n4d8gq0r50q6rpm5rs0mnxx"; depends=[adabag SPOT testit twiddler]; }; + TDPanalysis = derive2 { name="TDPanalysis"; version="0.99"; sha256="1kyhs4rpkm3gr55l6hrz4xcb9igk95si1m1sp175580k16n885z0"; depends=[plyr]; }; + TDboost = derive2 { name="TDboost"; version="1.2"; sha256="0sc9vby4892gm5b5h8gbdl4misqvgbkfp8fms53dk83malxkw1zx"; depends=[lattice]; }; TED = derive2 { name="TED"; version="1.1.1"; sha256="0nb2arx7c1m8ymnkmj3jwbcw23vhkr1f3vlym2hqs0pq0lnsl4g0"; depends=[animation fields foreach geoR RcppArmadillo zoo]; }; - TEEReg = derive2 { name="TEEReg"; version="1.0"; sha256="1xpr4m8yamifjx7njb7dyqv51rsbjym9c5avflf69r9sazf3n503"; depends=[]; }; + TEEReg = derive2 { name="TEEReg"; version="1.1"; sha256="0v5qz3vvmcm3fh16kjb05j1r0yj23r7hrxf2www20ng3dmga5q0f"; depends=[]; }; + TELP = derive2 { name="TELP"; version="1.0"; sha256="0wzm3dz0489ha7dd6lkashvvjydck9jw2pavlx9plpksvzr4q9ph"; depends=[arules arulesViz ggplot2 gridExtra RColorBrewer tcltk2 tm wordcloud]; }; TEQR = derive2 { name="TEQR"; version="6.0-0"; sha256="112znsz36jqh3krnr4j05xl70picih8qpmqky2gllgyr8nky39fr"; depends=[]; }; TERAplusB = derive2 { name="TERAplusB"; version="1.0"; sha256="0mshx615awcf2arm39mgw2gzgpyn7a3f767484g7z4nqqlikwpgc"; depends=[]; }; TESS = derive2 { name="TESS"; version="2.1.0"; sha256="05xsz2v847pwj4ja7hmg3zfbfqrwwzpf0ri0gjzb8snm2a7xm23y"; depends=[ape coda deSolve Rcpp]; }; @@ -2532,69 +3110,79 @@ in with self; { TFDEA = derive2 { name="TFDEA"; version="0.9.8.3"; sha256="0qg4nhlqqj7hc8lg732zz8klbbp3yksnq8q8n4ml3jz8gadrpyj7"; depends=[lpSolveAPI]; }; TFMPvalue = derive2 { name="TFMPvalue"; version="0.0.6"; sha256="1892jmgqywm0jp5l5k88brp4h8szkbi9bxi0v1jni1929qnsmqyf"; depends=[Rcpp]; }; TFX = derive2 { name="TFX"; version="0.1.0"; sha256="0xrjdbvg0ng4i0s8ql1pfyma10x4n045spilkb05750677r5j44p"; depends=[XML]; }; - TH_data = derive2 { name="TH.data"; version="1.0-7"; sha256="03h7lr5nh8090w167y3pmpxa0na1mqq4g4k8vz3ypjxc9ls2dq99"; depends=[MASS survival]; }; + TH_data = derive2 { name="TH.data"; version="1.0-8"; sha256="17csnwyk2f3d47nghkfy9wly5kff8zhdcfwfml7509hjrjgi13s7"; depends=[MASS survival]; }; TIMP = derive2 { name="TIMP"; version="1.13.0"; sha256="0b6g2afwjz2m7bnfhx1pjmq6x1ghjxgrwi6hz1l867qa4i2yx5hx"; depends=[colorspace deSolve fields gclus gplots minpack_lm nnls]; }; TITAN2 = derive2 { name="TITAN2"; version="2.1"; sha256="0cxcgkf776411ln5wbfdyjxa42jw473vcq1kns6k6p8dpm1y91c2"; depends=[]; }; TInPosition = derive2 { name="TInPosition"; version="0.13.6"; sha256="1cxxrfpbiyknaivv6gyp79lz0rxwhrndcd054smksxq8zcfz0v7c"; depends=[ExPosition InPosition prettyGraphs TExPosition]; }; TKF = derive2 { name="TKF"; version="0.0.8"; sha256="1db87lwx26ayv1x2k8qd9dfr6j3jkvdl9ykisaxr42l6akqy21nr"; depends=[ape expm numDeriv phangorn phytools]; }; TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; - TLdating = derive2 { name="TLdating"; version="0.1.1"; sha256="1c2879981fs7c5yvh0arpnlx1rb8pi9gvn3g71fv486dzd83gknm"; depends=[gplots Luminescence]; }; - TMB = derive2 { name="TMB"; version="1.6.6"; sha256="0sxkzfdgjqy9pjkmmk1bxlsxfq25lqh5h3nd5ydv2rivnak2jp3g"; depends=[Matrix RcppEigen]; }; + TLMoments = derive2 { name="TLMoments"; version="0.6.3.1"; sha256="1rcix93s70lwjpmlfxqjrdphkp3p84pmxjxxchsm05qif7y6iwn1"; depends=[evd hypergeo Rcpp]; }; + TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; }; + TMB = derive2 { name="TMB"; version="1.7.8"; sha256="0dwfz6js35wb28qah85m3y2ddkfbiy567402npmyqr4wrh8l37p3"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; }; TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; }; - TP_idm = derive2 { name="TP.idm"; version="1.0"; sha256="1dgcalzhkhj4cn1yjf23q6cm527fgf083n7nw7201824g78566n5"; depends=[]; }; + TOSTER = derive2 { name="TOSTER"; version="0.1.3"; sha256="15a7g1ccxk9xjcs3gysq8h4p0gd7527yq5zy6k9ara68a8f2dz1r"; depends=[]; }; + TP_idm = derive2 { name="TP.idm"; version="1.2"; sha256="08n5bgc7gw1cbn9q7kd6jfxcwmb5mfjmdmhkhr35fi5ah21a57mh"; depends=[]; }; + TPEA = derive2 { name="TPEA"; version="3.0"; sha256="1ppy9jf0mb43vwnn5qd65g5dxf7wv3agf5rkldyas5y1ynsnbvlg"; depends=[foreach igraph Matrix MESS RCurl XML]; }; TPmsm = derive2 { name="TPmsm"; version="1.2.1"; sha256="1vynzb6qpp8785rdjyarhvwbkasviamhljjlnp4i0dds96wwdgx1"; depends=[KernSmooth]; }; - TR8 = derive2 { name="TR8"; version="0.9.13"; sha256="07wrqwa5gf1l1y3b07mganr5xkzxdzrh6lrv7gf01m9b7bsz564m"; depends=[gdata gWidgets gWidgetstcltk plyr rappdirs RCurl taxize XML]; }; - TRADER = derive2 { name="TRADER"; version="1.2-1"; sha256="01pv2bbz3w880pl15fspj22k7ji2lhk5xxav81j4aqm24hr4l0dp"; depends=[dplR]; }; - TRAMPR = derive2 { name="TRAMPR"; version="1.0-7"; sha256="135ylhijhpdxpznfdbdzwfsvy8bhw1yx28c3520a3lyrqvinpawg"; depends=[]; }; + TR8 = derive2 { name="TR8"; version="0.9.15"; sha256="16mijxxddvnr3ii4v0djx5l844bp36pypmqn2r6gp3jwp9jn8czx"; depends=[gWidgets gWidgetstcltk plyr rappdirs RCurl readxl reshape taxize XML]; }; + TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; + TRAMPR = derive2 { name="TRAMPR"; version="1.0-8"; sha256="0nxp8wdr7yx94fk14m0r4dh2jxcvjqp6lg02092zww5y7jlbf4ds"; depends=[]; }; TRD = derive2 { name="TRD"; version="1.1"; sha256="0bhn4bcrq39f5dgqc74jqsfhs1iqfxhawacqqyncbk2372013nqp"; depends=[Rlab]; }; - TROM = derive2 { name="TROM"; version="1.1"; sha256="090m6l9x3q203mb6c454ign82zwcxk2appx0z3kr7bqrap245s7n"; depends=[AnnotationDbi GO_db gplots gtools lattice openxlsx RColorBrewer topGO]; }; + TROM = derive2 { name="TROM"; version="1.2"; sha256="1gfnlchaa16q9cksrgdkissy2fz481bcbac0cmxnc4vb0vbnz4h5"; depends=[AnnotationDbi GO_db gplots gtools lattice openxlsx RColorBrewer topGO]; }; TRSbook = derive2 { name="TRSbook"; version="1.0.1"; sha256="1w2yl5pchw2vn9l3qnm1ra9mjy946i5xsxh5n5xdvrcj2kak50x5"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; TSA = derive2 { name="TSA"; version="1.01"; sha256="0cm97hwxm6vfgy9mc3kgwq6dnmn86p8a4avnfjbai048qnwrn6hx"; depends=[leaps locfit mgcv tseries]; }; - TSHRC = derive2 { name="TSHRC"; version="0.1-3"; sha256="18ygg7bqwg1pdqi52l1lf33gcd277895rlf5853yzh7ln2ivssmi"; depends=[]; }; + TSHRC = derive2 { name="TSHRC"; version="0.1-4"; sha256="04pvh3vhgx3pj3sgkbxsqdwjglqbmaaj0rsb8b4q162bh608d9zl"; depends=[]; }; TSMining = derive2 { name="TSMining"; version="1.0"; sha256="1n32acagffiw31pr485ly3phx33zw7vj009bvw4lbqpixa1pszj2"; depends=[foreach ggplot2 plyr reshape2]; }; TSMySQL = derive2 { name="TSMySQL"; version="2015.4-1"; sha256="1gdda7li320ba9qfxfl5c4cwl2ln5jdbvid98cryj175g0nbmx7b"; depends=[DBI RMySQL tframe TSdbi TSsql]; }; - TSP = derive2 { name="TSP"; version="1.1-4"; sha256="17gv6kg0v8zirmgrmi61b3phjdb237z3jj5wxz1yn2m94halcnlj"; depends=[foreach]; }; + TSP = derive2 { name="TSP"; version="1.1-5"; sha256="03xxfr5kk4zhzpb1q1pwncdp0dhchm9b48wzhvvxn2dxf3mnby2w"; depends=[foreach]; }; TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; }; TSPred = derive2 { name="TSPred"; version="2.0"; sha256="0p4msk12n8jc1ss8p7m15rxd0ip7v83c5p78v26nk5dz21a4xprp"; depends=[forecast]; }; + TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.1.02"; sha256="1rvxbzhdzjb4f3b4pk53iwv0vpw8s0z8k1fyfpcxvy333f68d59f"; depends=[bfast broom ggplot2 RcppRoll strucchange]; }; TSSQLite = derive2 { name="TSSQLite"; version="2015.4-1"; sha256="10z8s967wmapkb56hh2brb5bafgqr8flwh0sr72yqqv0ca2d06sc"; depends=[DBI RSQLite tframe tframePlus TSdbi TSsql]; }; TSTr = derive2 { name="TSTr"; version="1.2"; sha256="0nljkqsrwzg7i82arpfrz2k9m1k1akin1akf01c5cadxq4rgarsf"; depends=[data_table stringdist stringr]; }; TSTutorial = derive2 { name="TSTutorial"; version="1.2.3"; sha256="0hpk6k3lc72p8pdz5aad04lcjsz9k443h5gs09dc3i10wqw3yhxs"; depends=[MASS]; }; TSclust = derive2 { name="TSclust"; version="1.2.3"; sha256="0m04svw4z2rhvzyckn8l4pg4rmwfn8xlzd9k839c47ldbzgb4z6l"; depends=[cluster dtw KernSmooth locpol longitudinalData pdc wmtsa]; }; TScompare = derive2 { name="TScompare"; version="2015.4-1"; sha256="0jmxnrbsdg368f29bp70rc9i88si5zjblbcn8rcjyn2k9vpd3q2f"; depends=[DBI tfplot tframe TSdbi]; }; - TSdata = derive2 { name="TSdata"; version="2015.4-2"; sha256="1c0ly1gs6p3fspwvk1f6c2xgzvc7p7pkzakm44lisbyjklacnilp"; depends=[]; }; + TSdata = derive2 { name="TSdata"; version="2016.8-1"; sha256="199dy4phc6z0kzbp4kks55519c3xgsx4dkwrypr9sg8xhprrwnib"; depends=[]; }; TSdbi = derive2 { name="TSdbi"; version="2015.7-1"; sha256="00dasnkkxw9rg1wyx1i2sqjr0ys1ahp9z6rdr08f8wl7zw5r8x6w"; depends=[DBI tframe]; }; - TSdist = derive2 { name="TSdist"; version="3.2"; sha256="085s7d4h777iifvfchsss41lhr7vrm5i0lmpvri6yaw3lsab4r90"; depends=[cluster dtw KernSmooth locpol longitudinalData pdc proxy TSclust xts zoo]; }; + TSdist = derive2 { name="TSdist"; version="3.3"; sha256="0n5y0816nyhn21ggyjhwlm8a21rzwynf27nh1vamkwzhqms11msm"; depends=[cluster dtw KernSmooth locpol longitudinalData pdc proxy TSclust xts zoo]; }; + TSeriesMMA = derive2 { name="TSeriesMMA"; version="0.1.1"; sha256="0dkrz3m5lh872c0q9nw4h0p6g4j1j9fn92hz8xlifpsbsyzpz63b"; depends=[]; }; TSfame = derive2 { name="TSfame"; version="2015.4-1"; sha256="197v123mkxr7qlksnb5iadms5zbc8xqbpgr2cspb8x1krz6phssz"; depends=[DBI fame tframe tframePlus tis TSdbi]; }; - TSmisc = derive2 { name="TSmisc"; version="2015.1-3"; sha256="1hv1q9p7vp7pxx9s4s9w3vkif1w1xr4y656x3zaf48ijxf6c6a90"; depends=[DBI gdata its quantmod tframe tframePlus TSdbi tseries xts zoo]; }; + TSmisc = derive2 { name="TSmisc"; version="2016.8-1"; sha256="0xvn6qlvvdc65l356r8b5ppddjd35k9fc4b5w5wn3j5wzxfllbk1"; depends=[DBI gdata quantmod tframe tframePlus TSdbi tseries zoo]; }; TSodbc = derive2 { name="TSodbc"; version="2015.4-1"; sha256="0m6r97gs483jg6jlmfkbzxg3jvf6q140kvpidjccj224zb1sqlcq"; depends=[DBI RODBC tframe tframePlus TSdbi TSsql]; }; - TSsdmx = derive2 { name="TSsdmx"; version="2015.12-1"; sha256="0vl2p1n6jmq4q17fdni1w5vrqyyf71b3g06nzgj03sbxiia20cz2"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; + TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; TSsql = derive2 { name="TSsql"; version="2015.1-2"; sha256="1hpi2cssnkzqgnaj91wrvb94fs8zpfg8hi4m1zwswzyl3az0l9sc"; depends=[DBI tframe tframePlus TSdbi zoo]; }; - TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.2"; sha256="00lzzarnpvb5dl4wzch1ll42wzcd2hc3xdi6fkgyiznx0nljapmg"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape tcltk2 wq]; }; + TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.3"; sha256="0a1v0lsfcn32w5rwcjwmvh0rghamwr5a76rx3npa6kv0dymnvhxf"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape tcltk2 zoo]; }; + TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; }; TTR = derive2 { name="TTR"; version="0.23-1"; sha256="1bmj0ngd3i3a9l2zsanifq3irz3rhsyd2rvvlhyndsgadkq9i5v9"; depends=[xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; - TUWmodel = derive2 { name="TUWmodel"; version="0.1-6"; sha256="1i986ra0hdhr3nvh9izg6ym69sg2qp4x7b9kx4x86qgi8w43slvh"; depends=[]; }; + TUWmodel = derive2 { name="TUWmodel"; version="0.1-8"; sha256="0c00jd2bq4i5fd55hj7l2grkpn990p0kmhbsh95b2zrzhbwgcjp6"; depends=[]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; TableMonster = derive2 { name="TableMonster"; version="1.2"; sha256="1cl70d0svzx8nsg6kw5dv50s9d6wxqkyg39d2d4vissbpilq6arn"; depends=[xtable]; }; TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.1"; sha256="135q0bgsm2yndrg3vpwmihbqlyf3qkm97i0jvcw6bf06p6b2fk41"; depends=[]; }; + TanB = derive2 { name="TanB"; version="0.1"; sha256="05y9j1a5nzqfpsw48gix5c4ds1cm80liad9wnwmddhbx4fda6p32"; depends=[fdrtool pracma]; }; TaoTeProgramming = derive2 { name="TaoTeProgramming"; version="1.0"; sha256="1b36s5mpm5vbhzcwmvm8g5pl7vpn6rsl5cnglfy8kgm1q9nnr7ff"; depends=[]; }; TapeR = derive2 { name="TapeR"; version="0.3.3"; sha256="0q5j7pn05z7hinwl5ypnrgh9ibsw6hvdfszjbnvavzab3bx8l6nn"; depends=[nlme pracma]; }; - Tariff = derive2 { name="Tariff"; version="1.0.1"; sha256="1jjg6qp6n9788w1snl7jsxdg168bbhskdp5wpqqbvcm651rb6d05"; depends=[]; }; + Tariff = derive2 { name="Tariff"; version="1.0.2"; sha256="0x139hhjjc1iyx9m3h5vdjh57q5kbc6x1mzjysz0ibnqpvhanjb2"; depends=[]; }; TauP_R = derive2 { name="TauP.R"; version="1.1"; sha256="10sjvcv70fjrsl5nnk9gm4sy7nhwm6aaq57gr37cb10v079ykmk1"; depends=[]; }; TauStar = derive2 { name="TauStar"; version="1.1.0"; sha256="1z5n1wfzc9c6zlxbr1vszp492vlq105p28n8jf5gkzsjraznk9zv"; depends=[Rcpp RcppArmadillo]; }; Taxonstand = derive2 { name="Taxonstand"; version="1.8"; sha256="1lxnfzg6r0ak1c1xrgakcbqnqpg1vqni5xh6hk89xxbdl8zgaa91"; depends=[]; }; TcGSA = derive2 { name="TcGSA"; version="0.10.1"; sha256="05cghnxn5r0ldr8cw371bz0iqx2b73b2qa77xj78xj7a950yvxhw"; depends=[cluster ggplot2 gplots GSA gtools lme4 multtest reshape2 stringr]; }; + Tcomp = derive2 { name="Tcomp"; version="1.0.0"; sha256="0ddswvww9yk31gh8qb9nh0glf9w2mp3ny7zps79kdcnvbkrpcbfs"; depends=[forecast Mcomp]; }; + TeachBayes = derive2 { name="TeachBayes"; version="0.1.0"; sha256="0izxdgjzjclnfg01v1inkm4mb4h56nn9y0ilc54m4rrayicvs071"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; TeachNet = derive2 { name="TeachNet"; version="0.7"; sha256="1p39bsf846r7zwz4lrrv2bpyx9yrkqzrnacajwrz3jjqj6qpp6cn"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; TeachingSampling = derive2 { name="TeachingSampling"; version="3.2.2"; sha256="07c1wx7hl246kvj9ah55kdjpag8a9zbzh3jy0680w5nnv8vzsxxs"; depends=[]; }; + TestDataImputation = derive2 { name="TestDataImputation"; version="1.0"; sha256="07k4sgjda1gwdlx5rap5fhs5rww2ahzyf0fq98dsm99gvjajnmwn"; depends=[Amelia mice]; }; + TestFunctions = derive2 { name="TestFunctions"; version="0.1.0"; sha256="0df69n004svbb8q0z57cfc59i7l8rxpq0c7krcn8mb03hp79fpwd"; depends=[]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; TestSurvRec = derive2 { name="TestSurvRec"; version="1.2.1"; sha256="05f5gc8hvz09hx015jzis6ikki9c1brdq7l7a9bxm9bqbcc9f2f9"; depends=[boot survrec]; }; TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.0"; sha256="1fagy9168cz09p460pa0qyn8m79zg4i2b9j5vg8gm1ssqi2znsl9"; depends=[alabama DoseFinding lattice]; }; - TextoMineR = derive2 { name="TextoMineR"; version="1.1"; sha256="0pdf3zd1glbwqm1lwvv6mcn1pd9phrg5vdwxr2lhh22xsmggswjp"; depends=[FactoMineR gdata MASS stringr tm]; }; - Thermimage = derive2 { name="Thermimage"; version="1.0.1"; sha256="16wpmwqfqjghhp4g5wpmgzf0ii2aa0gawcq74rfn4frfizzdy0ad"; depends=[]; }; + Thermimage = derive2 { name="Thermimage"; version="2.2.3"; sha256="16pwykp33bwmca7dlcr4ia3sakfdazxxk501v4rcr735767fsvyh"; depends=[png tiff]; }; Thinknum = derive2 { name="Thinknum"; version="1.3.0"; sha256="0j48vgr4wsc2chm95aprq0xm0dk720xk5zmiijxasg92sfp0va6n"; depends=[RCurl RJSONIO]; }; - ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="0.1-0"; sha256="1pafm8k90yv0hrk5a9adfv37087l2in0psslhkxha6mkmdh6a5f6"; depends=[MASS]; }; + ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-0"; sha256="075cn99k06lgdd0cwl1i9242fcxwmd5malcyks0mmwjf9kzw00z2"; depends=[MASS numDeriv]; }; ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; ThreeWay = derive2 { name="ThreeWay"; version="1.1.3"; sha256="17yl8zq029wiy3c0f4ssljx85dnm9n862wj2d24w7p0lxlvarmz6"; depends=[]; }; ThresholdROC = derive2 { name="ThresholdROC"; version="2.3"; sha256="08bmjsbwndb5i902plsy1wa5c1i5f96r3s6fdy0a16w9n6rvll1k"; depends=[MASS numDeriv pROC]; }; @@ -2603,29 +3191,38 @@ in with self; { TideCurves = derive2 { name="TideCurves"; version="0.0.1"; sha256="0xpb5xf7ipfnfrrc7j5gsvkn6njqz3ral9nim5gqqfgbnhxkvk1b"; depends=[chron data_table fields]; }; TideHarmonics = derive2 { name="TideHarmonics"; version="0.1-0"; sha256="0inqwa2y4pqs1g9d5m5y6w9j1kgc9qil6gmcilhkjrk886whf622"; depends=[]; }; TideTables = derive2 { name="TideTables"; version="0.0.1"; sha256="08c1fbwxc2kc3vicjdw8qg452y8jrsgyi6b4qbnpb8j6nj91qcx3"; depends=[chron data_table]; }; - Tides = derive2 { name="Tides"; version="1.1"; sha256="0w2xjnw2zv4s49kvzbnfvy30mfkn8hqdz6p155xm1kfqwvyb28qq"; depends=[]; }; + Tides = derive2 { name="Tides"; version="1.2"; sha256="1bd5x5wx6dd7498dc8jl0hsflxvlya2b6rkwg39dpsxsigb4qc5n"; depends=[]; }; + TileManager = derive2 { name="TileManager"; version="0.1.11"; sha256="11jlg99zfi00ss2a9qzmzxxdphdl3zy3pac0c7b0j2v2f529xwsw"; depends=[APfun raster rgeos sp]; }; TilePlot = derive2 { name="TilePlot"; version="1.3.1"; sha256="0yfzjyzc743rv5piw9mb7y0rr558hkxszgz49lya2w3i1mqvxbzy"; depends=[]; }; TimeMachine = derive2 { name="TimeMachine"; version="1.2"; sha256="1dz0j777wmd8mpkm2ryiahpcw6w88w429zjcw6m67pi20r1992cb"; depends=[]; }; TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; }; - TimeWarp = derive2 { name="TimeWarp"; version="1.0.12"; sha256="1qadaf8n8ym5nv1z328hd5wiw78f014imgd2ryvi70sh4dmzb16l"; depends=[]; }; + TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; Tinflex = derive2 { name="Tinflex"; version="1.1"; sha256="1wnb893x4gj1h3fpyblks07dln5ilpllpmmwp7wpqbvj7hzrj661"; depends=[]; }; - TipDatingBeast = derive2 { name="TipDatingBeast"; version="0.1-6"; sha256="0yfm99j2b3k9har87qb675jxgfp5vq3aizqvxc1njnfyh5yjg89k"; depends=[mclust]; }; - Tmisc = derive2 { name="Tmisc"; version="0.1.5"; sha256="17z3l8q86rd683ljiamc56a94ivbl6n4dyzxc3ppmnfy5m6ybv0p"; depends=[dplyr]; }; + TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-5"; sha256="0n0kw90nzyh8ik09kp1lq301rhdink6dqzd6xw9qkl10z8rzq7v1"; depends=[DescTools mclust TeachingDemos]; }; + TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; }; + Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; + Tmisc = derive2 { name="Tmisc"; version="0.1.12"; sha256="1awmc2gdas90hz66wiy4n7yqz3p0bl65adx0l6q7zx88w8nxn6lw"; depends=[audio dplyr]; }; + Tnseq = derive2 { name="Tnseq"; version="0.1.1"; sha256="00pd51mmy2w5cpxrx2zh5jmpcirj8ynma3whnv1nmdy4lf10mn50"; depends=[Biobase Ckmeans_1d_dp DESeq edgeR limma]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; }; - TraMineR = derive2 { name="TraMineR"; version="1.8-11.1"; sha256="037l0857vv51n3046vrcsxrc24hljwr7ya1q3d6cbw9la1qv5f0d"; depends=[boot Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.2.4"; sha256="144s25ivq27f81dgh9x9h1fph1hdk86w9yac1hy6358kc8jnmi3q"; depends=[cluster combinat RColorBrewer survival TraMineR]; }; + TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="0.1"; sha256="1477zp8jzq1p22q8484vkrdx5nxwq4i44mxg4zhj9fixiw4shpx9"; depends=[ape]; }; + TraMineR = derive2 { name="TraMineR"; version="1.8-13"; sha256="058fj2jkr9hzpigmawzfv20c7dzdf70lwwxng46x0b1r34pdgrfr"; depends=[boot Hmisc RColorBrewer]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.2.5"; sha256="198yvnvw8yq321p2cdan1s47dy9vy4yxhqsnlp391lzykvan1qpc"; depends=[cluster combinat RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.1"; sha256="1f2l3nshb6qrhyczw5rxqqzmsjxf0rvv3y78j8d9lv1nnd9kxzq5"; depends=[fields RColorBrewer]; }; + Trading = derive2 { name="Trading"; version="1.1"; sha256="1mzqck9n14xp16vflx1sx8lry0wjmx37hqv76ldj21xnk5zbrgil"; depends=[]; }; Traitspace = derive2 { name="Traitspace"; version="1.1"; sha256="1wlrpnzb39vgkqy0ynbwlgrkkqgklrk6pw7f8p7p2i132qk2c291"; depends=[mclust permute]; }; TransModel = derive2 { name="TransModel"; version="1.0"; sha256="1cxvfmf304x8riwcnx6gp5fb5gkqa552zby2n6yxc0ic0m0w77kb"; depends=[survival]; }; TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; }; - TransferEntropy = derive2 { name="TransferEntropy"; version="1.2"; sha256="11hwfbf53y88cpm693742hfzzpfwldwxag5860bv0h5r538aqini"; depends=[BH Rcpp]; }; - TreatmentSelection = derive2 { name="TreatmentSelection"; version="1.2.0"; sha256="10b9saa15mcsmzsxmg79hs8kmdn6by1b1j889105qii62cd0pzdl"; depends=[ggplot2]; }; + TransferEntropy = derive2 { name="TransferEntropy"; version="1.4"; sha256="0620axdj6qyskf7xszrs8j5d2l73ns4bgbdg03fvr8i7jmq70zb8"; depends=[BH Rcpp]; }; + TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.0.3"; sha256="00z85vmpy7k4vi2jj9yspybc9hkwqqfnvl1x9jqayyb8xw8wk0f6"; depends=[binom ggplot2 survival]; }; + TreeBUGS = derive2 { name="TreeBUGS"; version="1.0.1"; sha256="19nszlw5xgvd4r8rn6a4ayhx2nxxrmqw1ji4pbvn01y15cfyilfq"; depends=[coda hypergeo MASS Rcpp RcppArmadillo rjags runjags]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; TreeSim = derive2 { name="TreeSim"; version="2.2"; sha256="1c61afb49kjlfb6iy69vk2bgl20g8bhsbwnai2d2shmv1nimi5jf"; depends=[ape geiger laser]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="1.2"; sha256="0y6hadwx3apw11jy5d4al3dav3his8b4xvkv7s5d5rd92l7yrw0r"; depends=[TreeSim]; }; + TrendInTrend = derive2 { name="TrendInTrend"; version="1.0.1"; sha256="1fph4sz3y7drni0mjivz82jvmfa8hp468vmqk00k51w4nkg3hyif"; depends=[]; }; TriMatch = derive2 { name="TriMatch"; version="0.9.7"; sha256="06idgh9bwwbwa16hlc2kgm06n9shzm0825f7k65zpz3isq23dp7q"; depends=[ez ggplot2 gridExtra PSAgraphics psych reshape2 scales]; }; TrialSize = derive2 { name="TrialSize"; version="1.3"; sha256="1hikhw2l7d3c7cg4p7zzrgdwhy9g4rv06znpw5mc6kwinyakp75q"; depends=[]; }; - TripleR = derive2 { name="TripleR"; version="1.4.1"; sha256="028xvy3l72n1jhhfzv1fx1a51ya9bx008icz81ixjdwghzqr0wmi"; depends=[ggplot2 plyr reshape2]; }; + TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; }; + TropFishR = derive2 { name="TropFishR"; version="1.0.2"; sha256="0rkgjx3nnjyy46fbn4szvbsiz8awf6238h7br9kjwc06aaj935dp"; depends=[beepr doParallel GA GenSA MASS msm propagate reshape2]; }; TruncatedNormal = derive2 { name="TruncatedNormal"; version="1.0"; sha256="1qj18xcq58xah1niwxgqqzscl7dfgxh2s8fdbzk1vigwwm5xfvij"; depends=[randtoolbox]; }; Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; }; TukeyC = derive2 { name="TukeyC"; version="1.1-5"; sha256="08s9scsd2l6wavc7qqlffjbf89vkd6xpb4iawvbqf7jh8jiyvw17"; depends=[]; }; @@ -2635,77 +3232,94 @@ in with self; { TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; }; TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; }; UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; - UNF = derive2 { name="UNF"; version="2.0.1"; sha256="1gnzj7lxfp0x5f2ws9aclzaq75gbmsqhjqi02llmihf05gq0kp23"; depends=[base64enc digest]; }; + UBL = derive2 { name="UBL"; version="0.0.5"; sha256="13dvfpkyn9fc2lwlxzf5s47zjhgjnm7s9825w2brgq4l6x5afz9q"; depends=[]; }; + UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; + UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; + UNF = derive2 { name="UNF"; version="2.0.5"; sha256="1lag4aby81nnd7w8f68zswgm4afp24xhj72k0v7cka9hyxz0p129"; depends=[base64enc digest]; }; UPMASK = derive2 { name="UPMASK"; version="1.0"; sha256="19krsqkz2g5b6svqp29s6i92bhlk7liv8lf7d03za848w7y2jkhq"; depends=[DBI MASS RSQLite]; }; USAboundaries = derive2 { name="USAboundaries"; version="0.2.0"; sha256="1if3wf22h395iqcn1n5rfnacwhxd3mpmbvygdwbs2amk55r18vg4"; depends=[sp]; }; + USGSstates2k = derive2 { name="USGSstates2k"; version="1.0.1"; sha256="11yk0pkss23j6fmmxnjkjm9p24ln343y4hijigbrbvcnb21wj2py"; depends=[sp]; }; UScancer = derive2 { name="UScancer"; version="0.1-2"; sha256="0p1kxw1phqq598ljk3njznc9kmgscc8gmwdrvx1scba9rr6n61kl"; depends=[rgdal]; }; UScensus2000cdp = derive2 { name="UScensus2000cdp"; version="0.03"; sha256="143hqnzdla3p31n422ddzaaa34wc6xnnhil4y53m4qydyg407700"; depends=[foreign maptools sp]; }; UScensus2000tract = derive2 { name="UScensus2000tract"; version="0.03"; sha256="11ppw75k8zghj7xphx5xyl3azsdsyd142avp0la2g941w6f8l2n1"; depends=[foreign maptools sp]; }; UScensus2010 = derive2 { name="UScensus2010"; version="0.11"; sha256="1q06spkh8f4ijvfg557rl3176ki4i8a1y39cyqm3v7mnzwckyj3l"; depends=[foreign maptools sp]; }; + UStatBookABSC = derive2 { name="UStatBookABSC"; version="1.0.0"; sha256="16r6clhfaalfsg5hmvzm8a128zygxax5hyc0vr1q9bsw9hj7cs0c"; depends=[]; }; UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; Ultimixt = derive2 { name="Ultimixt"; version="2.0"; sha256="18xg1z41nccwzn9mdzpap41ffp4cmfww8bwk10m1v96acf9kq2i5"; depends=[coda gtools]; }; UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; }; - Unicode = derive2 { name="Unicode"; version="8.0.0-1"; sha256="0mhr0hirllcr55y92hywsx2xw0l4jyaq3dahlcpkypa3c19nx631"; depends=[]; }; - UpSetR = derive2 { name="UpSetR"; version="1.1.1"; sha256="1ygrjim2r2ff98dmksrdzlhgyh64xm6ryl79g25v9mxa2pygpc3k"; depends=[ggplot2 gridExtra plyr]; }; + UncertainInterval = derive2 { name="UncertainInterval"; version="0.3.0"; sha256="09x52g691qqsphy2sppm3852gak0ammsan4x306vd16yz9z0zlb2"; depends=[nloptr reshape2 rootSolve]; }; + Unicode = derive2 { name="Unicode"; version="9.0.0-1"; sha256="1daf4wlglqzha0p6cbmrkwn4ppkzfvpvg1aa64gphr4dg2g5jsdf"; depends=[]; }; + UpSetR = derive2 { name="UpSetR"; version="1.3.2"; sha256="0b8nms8b3n6m2ya1ms68crya41k0kq149kxg5999fw5lykx35bjr"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-5"; sha256="1w1swcb5srb2b76agbh3mipz8b3vbhpnhxfhg7k546y38j3crafq"; depends=[HistData Hmisc MASS]; }; - V8 = derive2 { name="V8"; version="1.0.0"; sha256="1d9smhmcmmc1mlkj8zx9nix7isd81589r3qdw4s2hqkjwvzdkcca"; depends=[curl jsonlite Rcpp]; }; + V8 = derive2 { name="V8"; version="1.2"; sha256="1sdjmg3d8m0jmfs7zmz7cpw4ffar76nia2dzymnb373alm1gwlh6"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; - VARSEDIG = derive2 { name="VARSEDIG"; version="1.1"; sha256="0fhn0r548k6xkm61bvl1bz81x284qycmc4ccql1g9770q68695va"; depends=[ade4 adehabitatHS car IDPmisc kulife MASS]; }; + VARSEDIG = derive2 { name="VARSEDIG"; version="1.3"; sha256="1qvc9lyfdc0irivi4y27hc5yn5lk05nbgqx7zcj602s0r7i7nvln"; depends=[]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VBLPCM = derive2 { name="VBLPCM"; version="2.4.4"; sha256="09b80313w2dljl009xzcfhdcl6flc8nqzw9pzgfbciwi61666ppb"; depends=[ergm mclust network sna]; }; VBmix = derive2 { name="VBmix"; version="0.3.1"; sha256="0gicp470w6xy2z4r54ywjd4c9cck2yhhw7ismdp4jm9zsvc7nv1y"; depends=[lattice mnormt pixmap]; }; - VCA = derive2 { name="VCA"; version="1.2.1"; sha256="0jwqwrjl7wl4358yrz5ab9a5hp9vd9apsxi5is6rlkswlam33hls"; depends=[Matrix numDeriv]; }; + VCA = derive2 { name="VCA"; version="1.3.2"; sha256="10d8vw6ihnsmqgvbfd6dwdilk9mz9wvmlxi39fpq219mqvqyzkah"; depends=[lme4 Matrix numDeriv]; }; VDA = derive2 { name="VDA"; version="1.3"; sha256="063mpwbyykx4f46wzfvrgnlq73ar7i06gxr4mjzbhqcfrsybi72b"; depends=[rgl]; }; - VGAM = derive2 { name="VGAM"; version="1.0-1"; sha256="1sh5gb4glnl84iiz33dnwmb37y1wpafjja1s70zy5kkg8178crn0"; depends=[]; }; - VGAMdata = derive2 { name="VGAMdata"; version="1.0-0"; sha256="1ywqmfn469hpw9h07raxxrw2wc736i3wbxq2vq31qll4shqnc4q3"; depends=[]; }; + VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; }; + VGAM = derive2 { name="VGAM"; version="1.0-3"; sha256="0wr6szcpj8r4a1rlzgd6iym7khin69fmvxcf37iyvs8mms86dfr3"; depends=[]; }; + VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; - VIFCP = derive2 { name="VIFCP"; version="1.1"; sha256="1xy9bsiz4ixsf7znlcaswcyryj8wf6r778wl11b1c33ip3ibq28x"; depends=[]; }; + VIFCP = derive2 { name="VIFCP"; version="1.2"; sha256="0w41k25vss806m5vpwmmcfsmwaixmln0pliql3a6xlwsihha5i34"; depends=[]; }; VIGoR = derive2 { name="VIGoR"; version="1.0"; sha256="1c24s917aafqy46b3xlsw8v3afs11nd5bq83vlygpgnz1612jpga"; depends=[]; }; - VIM = derive2 { name="VIM"; version="4.4.1"; sha256="0kpf4rdcm69k742d8naphw10wdwicx3jfm159n2d1c3v6hfjmv0g"; depends=[car colorspace data_table e1071 MASS nnet Rcpp robustbase sp vcd]; }; - VIMGUI = derive2 { name="VIMGUI"; version="0.9.0"; sha256="195lakyik597sjkq6c5v3881p35111gzmj2r5f5nr53vi6bn4pzm"; depends=[Cairo foreign gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; }; + VIM = derive2 { name="VIM"; version="4.6.0"; sha256="1yl6bsdigwjfkdn5mbfrw10ip1xr7scw1mvykdwgzkyfnlb8z86w"; depends=[car colorspace data_table e1071 laeken MASS nnet Rcpp robustbase sp vcd]; }; + VIMGUI = derive2 { name="VIMGUI"; version="0.10.0"; sha256="14na9ss0vkcys979kdcciynwssqsvy2w566nydgzd3n7gcmx2agm"; depends=[Cairo foreign gWidgets gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-1"; sha256="0y91cl9pv1d5s8956grdx3y4xa5l1fabrh1wl5hn11fjgyz1dcij"; depends=[MASS]; }; VNM = derive2 { name="VNM"; version="4.1"; sha256="1vmdm4f7y69imsbxnd7q85q1ygcyl94pq5n7f33d0sd8rw51dmdj"; depends=[Rcpp]; }; VPdtw = derive2 { name="VPdtw"; version="2.1-11"; sha256="0qsw5mqv36k8mcvwj1ka41z5kc05yn79wv41ai8f5412sbngihlr"; depends=[]; }; + VRPM = derive2 { name="VRPM"; version="1.1"; sha256="19rr31w0yzy7w9k34ny2sjk9ijwgnkfzbdizdch77g9rnpzpw597"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; - VSURF = derive2 { name="VSURF"; version="1.0.2"; sha256="1wrvgymwh2mgxrsciy62ib7lf9jyc5w9ga3s88cvcrvinagl21xs"; depends=[doParallel foreach randomForest rpart]; }; + VSURF = derive2 { name="VSURF"; version="1.0.3"; sha256="0fgy1qk1jkrnil4cirkp2lj21xjwbpgjgxqrsjs321s69rw2dy1j"; depends=[doParallel foreach randomForest rpart]; }; VTrack = derive2 { name="VTrack"; version="1.11"; sha256="1w8zp7l60mwzppg3gqq0zv5a065y0vdrp2v0x0yl4a8jq0zlvppx"; depends=[doParallel foreach plotKML sp spacetime]; }; + VWPre = derive2 { name="VWPre"; version="0.9.5"; sha256="1qxaq60zpb8hdpq3c17sm77jvm8r0yy88xvq1k8i52ggn8nn7gsc"; depends=[dplyr ggplot2 lazyeval mgcv shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; VarSelLCM = derive2 { name="VarSelLCM"; version="1.2"; sha256="1pzcadzg1snv2nkdrbhgi6scrd70cawprncm8hs82gcl3r9dscic"; depends=[Rcpp RcppArmadillo]; }; VarSwapPrice = derive2 { name="VarSwapPrice"; version="1.0"; sha256="12q2wp2cqi9q47mzbb7sc250zkjqkhs9z0h93ik0h63dv339abgj"; depends=[]; }; - VarfromPDB = derive2 { name="VarfromPDB"; version="2.0.5"; sha256="1wni4ywwkqp1kd82prrzzxjw8ljacq5d7lb751gyg4jrpcsdclr5"; depends=[RCurl RISmed stringi stringr XML XML2R]; }; - VariABEL = derive2 { name="VariABEL"; version="0.9-2"; sha256="0vlr6zxl75i49p35jxrc5fwfrb55n91hqdan2ikcix3r2k4qs5k0"; depends=[]; }; + VarfromPDB = derive2 { name="VarfromPDB"; version="2.1.11"; sha256="1pxv6f7bz7g75hk3y7ndc9qcf49fzl82xc8f165w18wgkqk0v6a4"; depends=[RCurl RISmed stringi stringr XML XML2R]; }; + VariABEL = derive2 { name="VariABEL"; version="0.9-2.1"; sha256="00k08mvd09rpplakvid6qal1zdxaj1bxn4d2ivpnqihisf7nxqbs"; depends=[]; }; + VariableScreening = derive2 { name="VariableScreening"; version="0.1.1"; sha256="03l929qhgr1bd721488xx0il1hlswv3zdad518ki94ghq9c4nmg3"; depends=[expm gee MASS]; }; VarianceGamma = derive2 { name="VarianceGamma"; version="0.3-1"; sha256="0h424hdphbgi9i84bgzdwmsq05w61q8300x8f9y4szbxa5k2dnar"; depends=[DistributionUtils GeneralizedHyperbolic RUnit]; }; VdgRsm = derive2 { name="VdgRsm"; version="1.5"; sha256="13mbv3ih6p2915wdzq4zjx7m4k37w1xddkxx6dzk1jiak2br9slj"; depends=[AlgDesign permute]; }; Vdgraph = derive2 { name="Vdgraph"; version="2.2-2"; sha256="1q8l711zbrrj4h1wmpv93nbvlg8xi6kjv22zpidkck8ncpyyla80"; depends=[]; }; - VecStatGraphs2D = derive2 { name="VecStatGraphs2D"; version="1.7"; sha256="08f9ixpiq8s5h8h608wrs9l16xk3c1xcrvwgvm5wqm6xfkj9gpfd"; depends=[MASS]; }; + VecStatGraphs2D = derive2 { name="VecStatGraphs2D"; version="1.8"; sha256="0jjxdwcj0n6kk5l7hw4zibpikqxhkkik5819qv75z4gqdgg0fgch"; depends=[MASS]; }; VecStatGraphs3D = derive2 { name="VecStatGraphs3D"; version="1.6"; sha256="1pnpgnxdiis4kzwhh17k61aidyan5fp9rzqhvwf6gljb4csqsk54"; depends=[MASS misc3d rgl]; }; - VennDiagram = derive2 { name="VennDiagram"; version="1.6.16"; sha256="180w0bbfzms12w5s23rbndk413ly5bmdia5qnj0025hicfbh9wvx"; depends=[futile_logger]; }; + VennDiagram = derive2 { name="VennDiagram"; version="1.6.17"; sha256="14cahgxm5kq133j5wv6p7ivlmcmym5r39v4dpj69wnq6w9rjqki8"; depends=[futile_logger]; }; VertexSimilarity = derive2 { name="VertexSimilarity"; version="0.1"; sha256="0f638y272dbmz5747wxqy9pxasxk3a9f9wf31gf297qx7268ab1m"; depends=[igraph]; }; - ViSiElse = derive2 { name="ViSiElse"; version="1.0.1"; sha256="1fqk9dcf1fkk7lk7b3iicvxd67q04mmqdf3zggj3cgw6jimx7ba7"; depends=[chron colorspace Matrix stringr]; }; + VetResearchLMM = derive2 { name="VetResearchLMM"; version="0.1.0"; sha256="0k5mr9426v1b3kqnzrb1nizrsvjmm5qx6fybrnn0y1j2w7hk99jr"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; + ViSiElse = derive2 { name="ViSiElse"; version="1.2.0"; sha256="0k5hhzyjws0haawx2r2c0rxjbjdfx821x0jmj88786q6x67x86n0"; depends=[chron colorspace Matrix stringr]; }; VideoComparison = derive2 { name="VideoComparison"; version="0.15"; sha256="0592fz0v4xvq1qy2hj4ph90v7zn1cnzr6a094mp9p1k61ki3fbg2"; depends=[pracma Rcpp RCurl RJSONIO zoo]; }; - VineCopula = derive2 { name="VineCopula"; version="1.6-1"; sha256="1yxsn6n5fd6n155jpk72wn09fw6x85m0kpdm4gbng8jdz5x4b49d"; depends=[ADGofTest copula igraph lattice MASS mvtnorm]; }; + VineCopula = derive2 { name="VineCopula"; version="2.1.1"; sha256="1cqfa7s3gqrbdhjy2v8yn44k6vlxpzi0bmlcpzf9kkzy36p3vz84"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; VisuClust = derive2 { name="VisuClust"; version="1.2"; sha256="0hnjmrz352950rzky88q4nwvkx7zp6x3lsm7kff5dl4w05iq4wsl"; depends=[aplpack]; }; - VizOR = derive2 { name="VizOR"; version="0.7-9"; sha256="1xw06y86nsrwpri6asrwh8kccjsqzzidgbpld6d6l7vrglp8m6sr"; depends=[lattice rms]; }; + VizOR = derive2 { name="VizOR"; version="0.8-5"; sha256="1v76m67xdlg06w3dmp27mh3mv3lfqy6bd1iq907dynp2g4qf4ww0"; depends=[lattice rms]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; VoxR = derive2 { name="VoxR"; version="0.5.1"; sha256="07lsp6lrkq0gv55m84dl9w7gz5246d9avypqnkz96n3rbbgd0w5z"; depends=[]; }; W2CWM2C = derive2 { name="W2CWM2C"; version="2.0"; sha256="139rbbhshiap3iq4s4n84sip3cwwjn2x7lm7kmzwj5glhl5dc6ga"; depends=[colorspace wavemulcor waveslim]; }; - W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-5"; sha256="1d4qpz6a984jv3p0l1w4xdhfx5iz9njz3dxlp0llyfzqg1szbqzj"; depends=[curl xml2]; }; + W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; WACS = derive2 { name="WACS"; version="1.0"; sha256="1x6vn7xhrnaggrxkvap6si8gz7b6z2zpjpbb9zgag4vyq3s7nxgy"; depends=[mclust mnormt mvtnorm tmvtnorm]; }; - WARN = derive2 { name="WARN"; version="1.2-0"; sha256="0iamg0jh11ydy04mp3vn6zjhr89454m78iz5mmyfywf0s5415san"; depends=[MASS]; }; + WARN = derive2 { name="WARN"; version="1.2-2"; sha256="1kp0p9ax6k4y990j95q70dhd1r37hjw3i583c2f6ds8gpddqdi3v"; depends=[MASS]; }; WCE = derive2 { name="WCE"; version="1.0"; sha256="1kb1z67ymnz8cgwxq6m5fpqgxmmrfiwh2q3x4rhanac2sinagyn4"; depends=[plyr survival]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; WDI = derive2 { name="WDI"; version="2.4"; sha256="0ih6d9znq6b2prb4nvq5ypyjv1kpi1vylm3zvmkdjvx95z1qsinf"; depends=[RJSONIO]; }; + WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; WGCNA = derive2 { name="WGCNA"; version="1.51"; sha256="0hzvnhw76vwg8bl8x368f0c5szpwb8323bmrb3bir93i5bmfjsxx"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore survival]; }; - WHO = derive2 { name="WHO"; version="0.1"; sha256="0szyzf8048czq8yh2wbck80qmnsgrzg7ik5zp7l71rzgjpcyf8hm"; depends=[dplyr httr]; }; + WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; }; WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; }; WMDB = derive2 { name="WMDB"; version="1.0"; sha256="10wdjy3g2qg975yf1dhy09w9b8rs3w6iszhbzqx9igfqvi8isrr1"; depends=[]; }; - WRS2 = derive2 { name="WRS2"; version="0.4-0"; sha256="11yfq8jkr2f28zmshkvjv0ajslh0137mprn9clgala8y4xrpqv94"; depends=[MASS plyr reshape]; }; + WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; + WRS2 = derive2 { name="WRS2"; version="0.9-1"; sha256="0w7qnqf289p5jnfr9l83bcplxg1rvbhc90iz7wwnphx7246nkdvv"; depends=[MASS mc2d plyr reshape]; }; + WRTDStidal = derive2 { name="WRTDStidal"; version="1.0.1"; sha256="14xi1wksyj07nch678dd4rbaa3q1in4nbsarv5bijl2b11dhfi7j"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate quantreg RColorBrewer survival tidyr]; }; + WVPlots = derive2 { name="WVPlots"; version="0.2.2"; sha256="11zbmsq2nbvb9m7wkybwcmk1lj6n8w1v355qwsp41j9pd7r3ccw8"; depends=[ggplot2 gridExtra mgcv replyr reshape2 sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; + WWR = derive2 { name="WWR"; version="1.0.0"; sha256="0nsgcasdgzxxlnpicmq9n9200gg2c2si3gfpwaxdy4ccwasgjq6p"; depends=[]; }; WaterML = derive2 { name="WaterML"; version="1.7.1"; sha256="0aqcanq2l3m9w1kglmkbqshs80wx9inmjp0c1i2j901g4k35ss5j"; depends=[httr RJSONIO XML]; }; Watersheds = derive2 { name="Watersheds"; version="1.1"; sha256="1gn52nl0rr29pqq94gjasc4fi1kjxlrpjdkgm2x56j5jbd162drk"; depends=[lattice maptools rgeos sp splancs]; }; Wats = derive2 { name="Wats"; version="0.10.3"; sha256="1wh4wxzmdj154mh61ng4bg827hpx1kw85x34c1d7xdpbq3wag4g1"; depends=[colorspace ggplot2 lubridate plyr RColorBrewer testit zoo]; }; + WaveLetLongMemory = derive2 { name="WaveLetLongMemory"; version="0.1.0"; sha256="1qfh5ca8389b3zimqfrlhjyzkrvvj3dixhbab1a0wrnbcc55dcq1"; depends=[fracdiff wmtsa]; }; WaveletComp = derive2 { name="WaveletComp"; version="1.0"; sha256="16ghxqjbv39pmgd52im6ilkkh0hpnaw8ns0hwkngpbr479m1grdp"; depends=[]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; @@ -2713,166 +3327,199 @@ in with self; { WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-6"; sha256="02lqvirnf24jn8b2s08z5fjmpilp2z08lww1s793n3pn783adbky"; depends=[lpSolve]; }; WhiteStripe = derive2 { name="WhiteStripe"; version="1.1.1"; sha256="1naavgkvgky3lzg5vlz11g589cxr0fgiqz2waz86da1ksk4a19gw"; depends=[mgcv oro_nifti]; }; - WhopGenome = derive2 { name="WhopGenome"; version="0.9.3"; sha256="1lalx3vr8n66nb84psjvc1mgi1rp7g1bylhxr93yyp5w4lwcfv77"; depends=[]; }; - WiSEBoot = derive2 { name="WiSEBoot"; version="1.3.0"; sha256="0db7h357h3g7y5qw8f8lgjkv48nayc9p7alr468r9lpn2kk7z54j"; depends=[FAdist wavethresh]; }; + WhopGenome = derive2 { name="WhopGenome"; version="0.9.4"; sha256="085jzpgd1wgbsj68n5cixq6q4hw2sz485d9lpmch9qakhbpm7849"; depends=[]; }; + WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; WikiSocio = derive2 { name="WikiSocio"; version="0.7.0"; sha256="1rc90cidc8mj8x7vw82vx41ivwnmil3cmc1whc8ghxrwli256w32"; depends=[httr igraph pbapply plyr RCurl stringr XML]; }; - WikidataR = derive2 { name="WikidataR"; version="1.0.1"; sha256="1c1mckbfyya9i2xd2a46fwfqyydxb6ayrlzgic2l12m5gdkzbxnr"; depends=[httr jsonlite WikipediR]; }; - WikipediR = derive2 { name="WikipediR"; version="1.3.0"; sha256="0ccxbz1vmfl73v6xcfpwnaxphdc7mcif09i4sk9nd58r1isbbhxn"; depends=[httr jsonlite]; }; + WikidataQueryServiceR = derive2 { name="WikidataQueryServiceR"; version="0.1.0"; sha256="17vnfarnqf5cqdldgwg505vcj2l0hji409zdyncks7xcq8myvswz"; depends=[dplyr httr jsonlite]; }; + WikidataR = derive2 { name="WikidataR"; version="1.2.0"; sha256="053gyls7bv4xb34jifxm5040zml2cwznna3brckf0191cvd5jgws"; depends=[httr jsonlite WikipediR]; }; + WikipediR = derive2 { name="WikipediR"; version="1.5.0"; sha256="1w4ggq42vlq7zbrz3v9ripz9yscbd8m8as60q7cplpxn9zqfdl7q"; depends=[httr jsonlite]; }; WikipediaR = derive2 { name="WikipediaR"; version="1.1"; sha256="0fxk247jb82g0f3nmwraa4kvdpjxy5s4dcyzj9vkjw2lq8by3l0h"; depends=[httr XML]; }; WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; }; + Wmisc = derive2 { name="Wmisc"; version="0.3.2"; sha256="1dyfpmsl1fdznnz79l8zkp6v4kxc9a260qp7g52mwxj9xw0jb0z7"; depends=[hash R6 Rcpp]; }; WordPools = derive2 { name="WordPools"; version="1.0-2"; sha256="1izs4cymf2xy1lax85rvsgsgi05ygf0ibi9gzxc96sbgvy4m78kf"; depends=[]; }; - WrightMap = derive2 { name="WrightMap"; version="1.2"; sha256="0d57wq639wgbs1kpr3ilzw70c3rz1i055n3flbyzvy49z9ghvcyp"; depends=[]; }; + Wrapped = derive2 { name="Wrapped"; version="1.0"; sha256="1c12yk0qw017ccdjr2hk6zxm93735hx7lwg2gp2cj15yb3rwnscf"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; }; + WrightMap = derive2 { name="WrightMap"; version="1.2.1"; sha256="16zp7h28fap5hq5xzvkb4lc217yhfmwzfbvw2lsni0gf9qxqkgqd"; depends=[]; }; WriteXLS = derive2 { name="WriteXLS"; version="4.0.0"; sha256="0nwxi36w3rkzw9j0qil64gakhb101rxg1wydjkwlpg0nbsj1sm50"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="0.6.1"; sha256="0nshs1c00f2cw7wmrphz1833gd336bckqa9h0q90hxj388kwis3y"; depends=[dplyr httr jsonlite]; }; - XBRL = derive2 { name="XBRL"; version="0.99.16"; sha256="1wrcm8srn185qrba7rig3fvwjz1n2ab296i0jr71vhyp9417h40q"; depends=[Rcpp]; }; + XBRL = derive2 { name="XBRL"; version="0.99.17"; sha256="00dg9624hc1l8c0nw1ma4ykgkmjzk3gqf77ndnagddh65cqbiigq"; depends=[Rcpp]; }; + XGR = derive2 { name="XGR"; version="1.0.8"; sha256="1fy203927bai86pj80m275afvcpj78nil1yi99lf1jvmmfck7riv"; depends=[BiocGenerics dnet GenomicRanges ggplot2 igraph IRanges Matrix RCircos rtracklayer S4Vectors supraHex]; }; XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; - XLConnect = derive2 { name="XLConnect"; version="0.2-11"; sha256="02wxnr6h06h125dqszs8mzq4av842g445ndr59xgscxr03fyvi8p"; depends=[rJava XLConnectJars]; }; - XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-9"; sha256="0js79297himq628cwx5cc3pcq3iv6p16bn4bpd5diyjaya4x27g3"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.98-1.4"; sha256="09hiy5a875v2fhsgrsfymrwccn9249wnnsr6ck2slrig65svq2lw"; depends=[]; }; + XLConnect = derive2 { name="XLConnect"; version="0.2-12"; sha256="0b7nz5k3sai32fvpqzxim5ckcqrqmzd111qxm65369zvg3q281jh"; depends=[rJava XLConnectJars]; }; + XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-12"; sha256="1wkdrvm6h1kpkfvwf5xcx7v1j06dmp6qxgiy5ca5b0qixhqg8sv7"; depends=[rJava]; }; + XML = derive2 { name="XML"; version="3.98-1.5"; sha256="0dcdj7ryn8lm7wmv4hqhh9jxa5k97l6ad8xyvb932yfkwj1g1byy"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XMRF = derive2 { name="XMRF"; version="1.0"; sha256="0jnyy9pcksfadznidqsbwh8nlqv3k0yppj76q8a2g0aidbdmg2cc"; depends=[glmnet igraph MASS Matrix snowfall]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; + XR = derive2 { name="XR"; version="0.7"; sha256="1wvjvvwmp39i23v61x46b4cw90yf8khcn5c61icpms0rmxcbdc7n"; depends=[jsonlite]; }; + XRJulia = derive2 { name="XRJulia"; version="0.7"; sha256="0xcm8rkgg6l5p50x7mpzxx4ln29j8s2ngdswfmgb6vq48p7ws9gw"; depends=[XR]; }; + XRPython = derive2 { name="XRPython"; version="0.7"; sha256="1vgxby01ac8s9ldfnjdyg0yj0y0341w596pp4sx5szdrl359n0fn"; depends=[rPython XR]; }; + XRSCC = derive2 { name="XRSCC"; version="0.1"; sha256="0hs2whjsd02avaz79zkrd8gjw9qd7l6ysxmhx4w1r7gb1cj9rr7c"; depends=[]; }; XiMpLe = derive2 { name="XiMpLe"; version="0.03-23"; sha256="13vsf9l3s0scqvxwxj109n6vb7rx3a2hv5lbrnjk6rxjwl8iqrly"; depends=[]; }; Xmisc = derive2 { name="Xmisc"; version="0.2.1"; sha256="11gwlcyxhz1p50m68cnqrxmisdk99v8vrsbvyr7k67f0kvsznzs1"; depends=[]; }; YPmodel = derive2 { name="YPmodel"; version="1.3"; sha256="1vll33nm7xynnbq15wksk9c38jhjfd6l1bbzijn5skqc5yik1r5x"; depends=[]; }; YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; YieldCurve = derive2 { name="YieldCurve"; version="4.1"; sha256="0w47j8v2lvarrclnixwzaq98nv1xh2m48q5xvnmk7j9nsv2l3p68"; depends=[xts]; }; - YplantQMC = derive2 { name="YplantQMC"; version="0.6-4"; sha256="09galr2bcjvfpcp84znsv45j2cfyn4yhdx31kxs062sylys6kxld"; depends=[geometry gplots LeafAngle rgl]; }; + YplantQMC = derive2 { name="YplantQMC"; version="0.6-6"; sha256="153sznajgp4bjsjhn3xk6kbp68ihswdc48gn0y3wmg5xa15yrqlk"; depends=[geometry gplots LeafAngle maps rgl]; }; YuGene = derive2 { name="YuGene"; version="1.1.5"; sha256="1f1bia1q1z2rzp4pw218zglf02x1m9zpz5gqllrd77ggw8ilqfjc"; depends=[mixOmics]; }; - ZIM = derive2 { name="ZIM"; version="1.0.2"; sha256="1n4dc0as011gzaac153zq1dfbg1axvmf9znlmhl7xjj4dz4966qm"; depends=[MASS]; }; + ZIM = derive2 { name="ZIM"; version="1.0.3"; sha256="1497ki0pr0x21fz5wa2z6zgb2br99z56gvfxyn9cglqq45if6cjh"; depends=[MASS]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; ZeBook = derive2 { name="ZeBook"; version="0.5"; sha256="1djwda6hzx6kpf4dbmw0fkfq39fqh80aa3q9c6p41qxzcpim27dw"; depends=[deSolve triangle]; }; - Zelig = derive2 { name="Zelig"; version="5.0-11"; sha256="134s2d3038b8j2j6xsh0a3parzpqsr50vi67nfjpsxm27qrih27y"; depends=[AER Amelia dplyr geepack jsonlite MASS MatchIt maxLik MCMCpack plyr quantreg sandwich survey survival VGAM]; }; - ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-0"; sha256="0mp59mkfbvayml3118kaxsvdqzh7mycnd27fy9dahapvb9qj408l"; depends=[dplyr jsonlite MASS VGAM Zelig]; }; + Zelig = derive2 { name="Zelig"; version="5.0-15"; sha256="1a55v03znczpbwlxd70dy73lzq75ifmqfkhwmwn7vdz8pdcsmiqx"; depends=[AER Amelia coda dplyr geepack jsonlite MASS MatchIt maxLik MCMCpack quantreg sandwich survey survival VGAM]; }; + ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-3"; sha256="0wh10mzasl2mzn0afas2k9dqjsmdgnbjci9i9s1fqxgdil0jp09q"; depends=[dplyr jsonlite MASS VGAM Zelig]; }; + ZeligEI = derive2 { name="ZeligEI"; version="0.1-0"; sha256="1vkni4p1b0aq63l4nqg16f6a28c6ccm8nyg67z45x0yfq7xgcsi6"; depends=[dplyr ei eiPack jsonlite MASS MCMCpack Zelig]; }; + ZillowR = derive2 { name="ZillowR"; version="0.1.0"; sha256="1wrr58p76ps29fqzzwgfvfibxrvc72p2yzs5kc2rv1yxzzcpyxvb"; depends=[RCurl XML]; }; aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.3"; sha256="0ar325hwzmldviq7f8c478z95xlamvhwwmqs2fv6p3cx7l9k0kz6"; depends=[bio3d caret data_table lattice plyr protiq randomForest reshape2 ROCR seqinr]; }; - aRpsDCA = derive2 { name="aRpsDCA"; version="1.0.2"; sha256="1h1gkk5i77f9dl77dgw2vlm0s7mkmpc4dhcw5mdggyxx944kg33s"; depends=[]; }; + aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.0"; sha256="128f3ggnqpdv12d1f1hpkq5nb1wdwihifvvb2k2ixizmhw7vn6dy"; depends=[]; }; aRxiv = derive2 { name="aRxiv"; version="0.5.10"; sha256="1q8nblb0kfdidcj1nwxn0fap87wpkg49z0bgmwayskwv1p860wrh"; depends=[httr XML]; }; - aSPU = derive2 { name="aSPU"; version="1.41"; sha256="1p9rfph1s2gwgi5vf2clqgy3mnh19ffxmpgg09q8x46g62dg35yw"; depends=[gee MASS matrixStats mvtnorm Rcpp RcppArmadillo]; }; + aSPU = derive2 { name="aSPU"; version="1.46"; sha256="01xysgyc7hj0pzidbmmg1119krcz1hvx52qbybijhjr3y0hw2mfi"; depends=[fields gee MASS matrixStats mvtnorm Rcpp RcppArmadillo]; }; aTSA = derive2 { name="aTSA"; version="3.1.2"; sha256="1p3spas0sxj08hkb8p6k2fy64w86prlw1hbnrqnrklr0hnkg2g54"; depends=[]; }; - abbyyR = derive2 { name="abbyyR"; version="0.3"; sha256="0x6c0ika129rgn4im1hhmfchqivdkfawi0sxkhkbxc9k1z41k95i"; depends=[curl httr readr RecordLinkage XML]; }; + aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.0"; sha256="193289dm3nvmkx0dmclm1isz62jvvmhynnm1w1964v5nz2jc8vzd"; depends=[party randomForest rpart]; }; + abbyyR = derive2 { name="abbyyR"; version="0.5.0"; sha256="1i0mrh25mgl8aykprihsdm3zn0nsw0cr458rqnz7djff1j0mp8rg"; depends=[curl httr progress readr XML]; }; abc = derive2 { name="abc"; version="2.1"; sha256="0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb"; depends=[abc_data locfit MASS nnet quantreg]; }; abc_data = derive2 { name="abc.data"; version="1.0"; sha256="1bv1n68ah714ws58cf285n2s2v5vn7382lfjca4jxph57lyg8hmj"; depends=[]; }; abcdeFBA = derive2 { name="abcdeFBA"; version="0.4"; sha256="1rxjripy8v6bxi25vdfjnbk24zkmf752qbl73cin6nvnqflwxkx4"; depends=[corrplot lattice rgl Rglpk]; }; - abcrf = derive2 { name="abcrf"; version="1.2"; sha256="13kfp1v5qimz8raa004f929xaknphjkp5w4kkj008svca3lp3a61"; depends=[doParallel doRNG foreach MASS randomForest]; }; + abcrf = derive2 { name="abcrf"; version="1.5"; sha256="1jfplr549cd6mpm694spc8ws0d56q3pa5wv1z57blayk4mxnczwv"; depends=[MASS ranger readr stringr]; }; abctools = derive2 { name="abctools"; version="1.0.4"; sha256="0y03sql473ylwcbiayl7rn4psc7d8ck0z6vbimnwpx73l143jww2"; depends=[abc abind plyr]; }; abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; - abind = derive2 { name="abind"; version="1.4-3"; sha256="1km61qygl4g3f91ar15r55b13gl8dra387vhmq0igf0sij3mbhmn"; depends=[]; }; - abn = derive2 { name="abn"; version="1.0"; sha256="1nv9ibk9d58njjz24mswhdv7v9bf0icnjvavqyzh1l0g16aw0ih5"; depends=[Cairo]; }; + abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; + abjutils = derive2 { name="abjutils"; version="0.0.1"; sha256="0bgk522jxj31crzg3pa4pghz1sjx6gr3jchh9cwqdslr9ydd0g0j"; depends=[devtools dplyr httr magrittr stringr tibble]; }; + abn = derive2 { name="abn"; version="1.0.2"; sha256="0jxpw5mplnpc57jjg9w3zrik40g7va6s8m9zbfsyf0vqn645wfwq"; depends=[Cairo]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; - abundant = derive2 { name="abundant"; version="1.0"; sha256="0n2yvq057vq5idi7mynnp15cbsijyyipgbl4p7rqfbbgpk5hy3qb"; depends=[QUIC]; }; - acc = derive2 { name="acc"; version="1.2.4"; sha256="17211jrpkn65p07x1547l650y33k3l8cmjj1jgk485kbr4kdzk99"; depends=[mhsmm nleqslv PhysicalActivity plyr zoo]; }; + abundant = derive2 { name="abundant"; version="1.1"; sha256="1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"; depends=[QUIC]; }; + acc = derive2 { name="acc"; version="1.3.3"; sha256="1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m"; depends=[circlize DBI ggplot2 iterators mhsmm nleqslv PhysicalActivity plyr R_utils Rcpp RcppArmadillo RSQLite zoo]; }; accelerometry = derive2 { name="accelerometry"; version="2.2.5"; sha256="00mn09j7y39sc7h5srnnfk2l73vhh6zq7rzc0vckfvs72lncmwv5"; depends=[Rcpp]; }; - accrual = derive2 { name="accrual"; version="1.1"; sha256="12zlv34pgmhcvisqk3x09hjpmfj91pn56pkjyj483mcf634m9ha4"; depends=[fgui SMPracticals]; }; - accrued = derive2 { name="accrued"; version="1.3.5"; sha256="10j8vrjgb43bggkf2gn518ccfard2f071mj6nwsxrzkm00pbx32v"; depends=[]; }; - acepack = derive2 { name="acepack"; version="1.3-3.3"; sha256="13ry3vyys12iplb14jfhmkrl9g5fxg3iijiggq4s4zb5m5436b1y"; depends=[]; }; + accelmissing = derive2 { name="accelmissing"; version="1.1"; sha256="0s2vy16zcpvbqyqz4ifdqccs6bfp8sf7azvfy8jjcm73xncv6ij3"; depends=[mice pscl]; }; + accrual = derive2 { name="accrual"; version="1.2"; sha256="1d9jis7d2fihkmwlqqvjl2kh6dcinzbffc9c0m4aqwzaq7c6ngjx"; depends=[fgui SMPracticals tcltk2]; }; + accrued = derive2 { name="accrued"; version="1.4.1"; sha256="05g1jb5914z18rcai1ahn7nihn27vr2rnadwv94gc1j7ivvikvs5"; depends=[]; }; + acebayes = derive2 { name="acebayes"; version="1.3.4"; sha256="0zg2yzbmmbv8nfgvncgc1hxrswxpj786pljlpmkib0iw9zvpy48w"; depends=[compare lhs Rcpp RcppArmadillo]; }; + acepack = derive2 { name="acepack"; version="1.4.1"; sha256="1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2"; depends=[]; }; acid = derive2 { name="acid"; version="1.1"; sha256="030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd"; depends=[gamlss gamlss_dist Hmisc]; }; acm4r = derive2 { name="acm4r"; version="1.0"; sha256="1wqzc35i1rshx0zlmas8y4qkkvy6h9r4i4apscjjv1xg2wjflzxa"; depends=[MASS]; }; acmeR = derive2 { name="acmeR"; version="1.1.0"; sha256="000b2hqlhj93958nddw0fqb15ahigs08najv2miivym046x04mf7"; depends=[foreign]; }; acnr = derive2 { name="acnr"; version="0.2.4"; sha256="1nry927zqhb34h9lcixr344n3sxvq1142zwgj8hadlw69dv8m59y"; depends=[R_utils xtable]; }; acopula = derive2 { name="acopula"; version="0.9.2"; sha256="1z8bs4abbfsdxfpbczdrf1ma84bmh7akwx2ki9070zavrhbf00cf"; depends=[]; }; acp = derive2 { name="acp"; version="2.1"; sha256="0lcwbjcyyr32m6qjmjqh25qjwrbyqj1n092xhgbhxzd8fslppnmn"; depends=[quantmod tseries]; }; + acrt = derive2 { name="acrt"; version="1.0.1"; sha256="0y9ndcq8ffpfrv7w9rikm4zn68jpsj6baqisq9kp2433xrwzdb6s"; depends=[Rcpp RcppEigen sandwich]; }; acs = derive2 { name="acs"; version="2.0"; sha256="0iddpjbswmxgqbly35gw1f9h3kv7yq3y72j9ngzq6xx00jarc3y7"; depends=[plyr RCurl stringr XML]; }; acss = derive2 { name="acss"; version="0.2-5"; sha256="0cqa60544f58l5qd7h6xmsir40b9hqnq6pqgd5hfx2j2l5n7qhmk"; depends=[acss_data zoo]; }; acss_data = derive2 { name="acss.data"; version="1.0"; sha256="09kl4179ipr8bq19g89xcdi1xxs397zcx5cvgp6viy8gn687ilgv"; depends=[]; }; - activity = derive2 { name="activity"; version="1.0"; sha256="1y1vy3kj9n21jvbyl3s5hllfkqp3z1rnn7701c5jxhay5dbdz3p2"; depends=[circular overlap pbapply]; }; - activpalProcessing = derive2 { name="activpalProcessing"; version="1.0"; sha256="1s84z9h68lwfinnr747brwbn4iai1axn7kh5nmlc6h41rchf64ja"; depends=[chron]; }; - actuar = derive2 { name="actuar"; version="1.2-0"; sha256="14zbp152wsrnflj08mj9hxr61lzb6lx4spxyw45l2rs65ahj8hd6"; depends=[]; }; - ada = derive2 { name="ada"; version="2.0-3"; sha256="1c0nj9k628bcl4r8j0rmyp5f1igdjq6qhjxyif6575fvn2gdzmbw"; depends=[rpart]; }; + activity = derive2 { name="activity"; version="1.1"; sha256="1lqajgxfps2h6amz1791vp3f52rs9ghmanq1nqfxqd2jmk3idkrx"; depends=[circular overlap pbapply]; }; + activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; }; + actuar = derive2 { name="actuar"; version="2.1-0"; sha256="0zmfhdii3k1bjcv7dk4ic21645j96z75mvrqgwhg926qfzifsick"; depends=[expint]; }; + ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; adabag = derive2 { name="adabag"; version="4.1"; sha256="0a6hwcr0fg0a99y91i3wxrk6k0f7ldwvz9jr3akmiprc28v8r4zz"; depends=[caret mlbench rpart]; }; - adagio = derive2 { name="adagio"; version="0.6.3"; sha256="0f5sn25qx0zmwqphd06qppf9j7annqhqxax3jssg37yqjakbbln2"; depends=[quadprog]; }; + adagio = derive2 { name="adagio"; version="0.6.5"; sha256="0jy8g5604alaqbi5ynj95ig07igzbgk8x03a4x1rzkvfwvydfflz"; depends=[]; }; + adapr = derive2 { name="adapr"; version="1.0.2"; sha256="1mbl0b9njjf0zwddkylmwyvrridqqx69v9invxqhc5kc6fvk4f10"; depends=[devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard]; }; adaptDA = derive2 { name="adaptDA"; version="1.0"; sha256="0nk7n628d30jz03a2rmpgzrwwd79rlpqvr6lwhilmkg1gblvz7r1"; depends=[MASS]; }; adaptMCMC = derive2 { name="adaptMCMC"; version="1.1"; sha256="1y1qxn3qm59nyy9ld5x30p452yam7b2fyl236b14xvpm8g3xx1fa"; depends=[coda Matrix]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; - adaptivetau = derive2 { name="adaptivetau"; version="2.2"; sha256="1xqvbbdmn70fmycpn0680q1l9s34kcmkjl812d7yrfxwm1bjfif5"; depends=[]; }; + adaptivetau = derive2 { name="adaptivetau"; version="2.2-1"; sha256="1hd2l1jv4i5mg0k0g8bbrvv43nk1zxbwh21594zayrzjyikb2593"; depends=[]; }; adaptsmoFMRI = derive2 { name="adaptsmoFMRI"; version="1.1"; sha256="1h79gh1bd6s2xhwf4whh72wf2cz4di2p8dnlf6192mfg108qc6nw"; depends=[coda Matrix MCMCpack mvtnorm spatstat]; }; - addhaz = derive2 { name="addhaz"; version="0.3"; sha256="1jkj5ldxlzz3cb87v2syzvzs0fwlc6dpjnapqkhfaqh1pvmwgnwi"; depends=[boot MASS Matrix]; }; + addhaz = derive2 { name="addhaz"; version="0.4"; sha256="0i3czmv538m8s3pnxrhh2a1mrdv9m3hgzjkb25p7hygwnzz54drg"; depends=[boot MASS Matrix]; }; addhazard = derive2 { name="addhazard"; version="1.0.0"; sha256="178rn3md0pgbg9nimvypj4c3paq3bgh2h06vqj3p0n78hrwf97rl"; depends=[ahaz rootSolve survival]; }; + addinslist = derive2 { name="addinslist"; version="0.2"; sha256="04jqhdy0axs1a9c0cfi3pqy9hd67jqxz79a2lj209gd27qv1q22c"; depends=[curl devtools DT miniUI rappdirs rmarkdown rvest shiny shinyjs xml2]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="2.0"; sha256="1lc8p70di466i061jrbahq4hir4g5a8rns6044jjjg8v7b1y8alc"; depends=[combinat glm2]; }; - ade4 = derive2 { name="ade4"; version="1.7-4"; sha256="17sbicash7z4b63dlrbaf8xx2pbwh62vykzvhdjs43h8jkl881y7"; depends=[]; }; + ade4 = derive2 { name="ade4"; version="1.7-5"; sha256="0aaqbnydm5fb37nrvqj4bx6hxax7255j426cwh2lh88nyvznbq37"; depends=[]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.2-9"; sha256="0kfnikkzhyfxskrphr65b8amjhdfq35x6dda4kivdhn7ak07s3ll"; depends=[ade4 adegraphics lattice tkrplot]; }; adegenet = derive2 { name="adegenet"; version="2.0.1"; sha256="045vc1s1n4ihw9id02c3w315pgfr004was2b0d6xb07ncipg9pby"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; - adegraphics = derive2 { name="adegraphics"; version="1.0-5"; sha256="023ii21r3abw78wl1xjmn40rz2dplk3a402618xpwjk93ah74kgc"; depends=[ade4 KernSmooth lattice RColorBrewer sp]; }; + adegraphics = derive2 { name="adegraphics"; version="1.0-6"; sha256="0qahc6ld5nz6z81jv9yhh2cd27vh9n02swdf787fr83jgig43hja"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; adehabitat = derive2 { name="adehabitat"; version="1.8.18"; sha256="1ng55j95hzhh853qa55mfx4xdh954ap8pqy01kyg5mgyn45i7rpa"; depends=[ade4 shapefiles sp tkrplot]; }; adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.14"; sha256="0ljmn4zbg2lb5b2ckddbxd7ibbib1pzv4iv0ld2k3bv1mvn2j565"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.12"; sha256="06lrg1s3l7slbff17my62ap7mn6h3p6s8jnn7j8mrs48nvim00z9"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; - adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.20"; sha256="0sxi4dzd34p61d8dskj92nw7n4x9iflyf9fx48jxwb19lvy5902m"; depends=[ade4 adehabitatMA CircStats sp]; }; - adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.10"; sha256="0b8nxk8339chhmjqjwsdlmy9nf729p0fgyh2hd1q93grgds9p1rs"; depends=[sp]; }; - adephylo = derive2 { name="adephylo"; version="1.1-6"; sha256="1sk639gmk3cs711xn68mx18r28kjd1pychcg89qlki03y1hnxg7j"; depends=[ade4 adegenet ape phylobase]; }; + adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.21"; sha256="0anyvijvlrq7c0a77dpcyq60yl1jc817rj5cb3s9iq6scicymp87"; depends=[ade4 adehabitatMA CircStats sp]; }; + adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.11"; sha256="1911zdpwyr1gqyjvnn5w3blhk0mjafy0xmr3l6l749lx4cwa08d9"; depends=[filehash sp]; }; + adephylo = derive2 { name="adephylo"; version="1.1-10"; sha256="1hj9nkl2z2xdb5yv9a7fb7zn9sd41lrhk2ff5z8s88xab3b2vhnc"; depends=[ade4 adegenet ape phylobase]; }; + adespatial = derive2 { name="adespatial"; version="0.0-7"; sha256="0abbds2f43dcri50crlz2fbqy444zp4bhbs81zdiby5fz64m9gr5"; depends=[ade4 adegraphics lattice MASS shiny sp spdep]; }; adhoc = derive2 { name="adhoc"; version="1.0"; sha256="193adddarjkc2kk1xncfkm919s1lkmc1yzgyz9793p74nqmfsj0a"; depends=[ape polynom spider]; }; - adimpro = derive2 { name="adimpro"; version="0.7.8"; sha256="06zwdgl7g4azg2mn7p35may8hsjcvf2dz7dj86zqngjspda123s4"; depends=[]; }; + adimpro = derive2 { name="adimpro"; version="0.8.2"; sha256="0nfzk9pp4p16c1nvpidngag96r845376h8ljh7m6p6rhk9fs4jdw"; depends=[awsMethods]; }; adlift = derive2 { name="adlift"; version="1.3-2"; sha256="0nzg16vhm5qg3xzczi3f6cynvp9ym2jsfrc4fdyxq7bwp9kry2i4"; depends=[EbayesThresh]; }; + admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; ads = derive2 { name="ads"; version="1.5-2.2"; sha256="17k24dihl41jgkkglhnkj7lvvl53dgahjkb5jhfmfgk6i16c7s23"; depends=[ade4 spatstat]; }; + advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; adwave = derive2 { name="adwave"; version="1.1"; sha256="0kkwgcyxddzmrb8h1w1f4xy2cq40b86q0lxwfdhx25z3zjc4m1ni"; depends=[waveslim]; }; - aemo = derive2 { name="aemo"; version="0.1.0"; sha256="1iik0rrqkkx9n1qb1pvq5iwxqmvs6vnx8z80hdzb5vqq0lvi1bsx"; depends=[assertthat dplyr lubridate stringr]; }; - afex = derive2 { name="afex"; version="0.15-2"; sha256="0fcrl3lmrrdp1x4rxghfrmpa1v0pz87kwwmbqmg2qpvvzib8r9fa"; depends=[car coin lme4 lsmeans Matrix reshape2 stringr]; }; + aemo = derive2 { name="aemo"; version="0.2.0"; sha256="11msifszq7pzmcmwibf2dk2j5dqjc74hrxdxshlprkp6p8sfhijh"; depends=[assertthat dplyr lubridate stringr]; }; + afex = derive2 { name="afex"; version="0.16-1"; sha256="0y0q7lbdraw8sn4l9qazvdawqpsyjzhfzddp9gii8w72a69s90dq"; depends=[car coin lme4 lsmeans Matrix pbkrtest reshape2 stringr]; }; + after = derive2 { name="after"; version="1.0.0"; sha256="0r0cdb0jspqi5vmaighwwqc0636wc5m297nq1j3n84w7z2aglg2w"; depends=[]; }; aftgee = derive2 { name="aftgee"; version="1.0-0"; sha256="0gfp05r6xvn9fcysbqyzkz916axpsc2d3lb5wmb1v92z1zw3037b"; depends=[BB geepack MASS survival]; }; - agRee = derive2 { name="agRee"; version="0.4-0"; sha256="19nvn2hiijn81wgqhx7s6blr2ilzx6p2s2qx1lw9shmnsmyywmss"; depends=[coda lme4 miscF R2jags]; }; + agRee = derive2 { name="agRee"; version="0.5-0"; sha256="16ijw02x5qvc8rppf0yn35aljd35alnvjkjyi6725nywjib2xy5x"; depends=[coda lme4 miscF R2jags]; }; agop = derive2 { name="agop"; version="0.1-4"; sha256="1jwyl02z053rsdw9hryv1nyj9wlq310l51fghp1p0j51c159mlpx"; depends=[igraph Matrix]; }; - agricolae = derive2 { name="agricolae"; version="1.2-3"; sha256="0lly0dpdmc2kk843mdpj7gawffysf2yc31shsyhqlnf0sibblmik"; depends=[AlgDesign cluster klaR MASS nlme spdep]; }; + agricolae = derive2 { name="agricolae"; version="1.2-4"; sha256="115k72riidc2dmq6gz52vqv63ijwj6akdwp31k14qmlv3a28asiz"; depends=[AlgDesign cluster klaR MASS nlme spdep]; }; agridat = derive2 { name="agridat"; version="1.12"; sha256="1b3dgrp6mkfpfaywqdm22sakadhnl1vlyj1n3rq6bc2f0gf8kcrw"; depends=[lattice reshape2]; }; - agrmt = derive2 { name="agrmt"; version="1.40.1"; sha256="06pd9svpvw38x5skdqz6fhax92wgrxjkdpw5qfph4hgqx53dxz9p"; depends=[]; }; + agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; }; agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; - ahp = derive2 { name="ahp"; version="0.2.8"; sha256="07h6z4qp0jhfmjavk18cc3j95wg4jyfclpz4rcj93j484qj0f1aa"; depends=[data_tree DiagrammeR formattable yaml]; }; + ahp = derive2 { name="ahp"; version="0.2.11"; sha256="09n06k5dmmpw6h6s51x9xy6rkk54fswss8pflh3v9nprbx7vzx4i"; depends=[data_tree DiagrammeR formattable yaml]; }; aidar = derive2 { name="aidar"; version="1.0.0"; sha256="01vs14bz4k504q5lx65b60kyi7hgvjdmib8igiipjmg4snwh8hdk"; depends=[XML]; }; - akima = derive2 { name="akima"; version="0.5-12"; sha256="10lbx69val6ysy6gk5nn1nl0ldgg90xfnj5snf9kdixfapi8vxnk"; depends=[sp]; }; + aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; + airGR = derive2 { name="airGR"; version="1.0.5.12"; sha256="02nasl8qamvbggwwfpgjfgqazfs1bfv6h48r1kab9wynpgqknynm"; depends=[]; }; + akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; - alakazam = derive2 { name="alakazam"; version="0.2.3"; sha256="0z2kmzv33qyb7iawzndynpl1n395sk05lx3a31qbin6f1yc55lrp"; depends=[dplyr ggplot2 igraph lazyeval scales seqinr stringi]; }; - ald = derive2 { name="ald"; version="1.0"; sha256="1vphmqhx6wlzsz3s94jsa4mk6wpacp93wfgpj0vp9ljfb3aplhik"; depends=[]; }; + alakazam = derive2 { name="alakazam"; version="0.2.5"; sha256="1mc6riwycizbmr7mx6r4fs513ij8g14fgs5ngg2rai7cp58796cc"; depends=[data_table dplyr ggplot2 igraph lazyeval Rcpp scales seqinr stringi]; }; + ald = derive2 { name="ald"; version="1.1"; sha256="1ar9mrvfw2jz4js9prbp9icsync7fw6wpirpximsr4cy1klqjfpn"; depends=[]; }; + algorithmia = derive2 { name="algorithmia"; version="0.0.2"; sha256="0kly70l9si8ni8n5xm30vai70pvfvip6354scvjqj34362s0lm0a"; depends=[base64enc httr rjson xml2]; }; algstat = derive2 { name="algstat"; version="0.0.2"; sha256="1ssdrrwnxrhx3syndqxqcaldlbnjamk3x2yiq7jgxy0qsiadmqsi"; depends=[mpoly Rcpp reshape2 stringr]; }; - alineR = derive2 { name="alineR"; version="1.1.2"; sha256="11ddg93iaq4xpg5rfw8qi82qhnmw6qnbzzsahr80xc0qn3p94i7d"; depends=[]; }; + alineR = derive2 { name="alineR"; version="1.1.3"; sha256="000rywvianwi0xm0ccsmc7g2hl9d0zjl3qplidrr7rz872f6snwm"; depends=[]; }; allan = derive2 { name="allan"; version="1.01"; sha256="02bv9d5ywbq67achfjifb3i7iiaaxa8r9x3qvpri2jl1cxnlf27m"; depends=[biglm]; }; allanvar = derive2 { name="allanvar"; version="1.1"; sha256="142wy1mf4jbp4hy756rz95w24f4j1dgf14f1n5sd09dg4w98j7xg"; depends=[gplots]; }; - alleHap = derive2 { name="alleHap"; version="0.9.2"; sha256="1hi764kczvza6kkqdnw8rk30r8rf1zfj1lbjiq9xc2lnfminxwiv"; depends=[abind]; }; + alleHap = derive2 { name="alleHap"; version="0.9.7"; sha256="1fpfi8d6fb1r41fq18b35ngzfmbm9qq0lvdbbgahlgjf9n0zbp30"; depends=[abind]; }; allelematch = derive2 { name="allelematch"; version="2.5"; sha256="1kws6y3igq6l85cfjrck2dzcfpgr56ridbc6w071h8kjw19mlzas"; depends=[dynamicTreeCut]; }; allelic = derive2 { name="allelic"; version="0.1"; sha256="0xs4kd3vqb5ph8kqc3lcqgirrdkz8b627pvnczvci2g0sr3cl18j"; depends=[]; }; + alluvial = derive2 { name="alluvial"; version="0.1-2"; sha256="039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"; depends=[]; }; alm = derive2 { name="alm"; version="0.4.0"; sha256="125cl5b1sps33ipsh2pygrw79mhin1qj374lq56ny7c9rp4n9w7p"; depends=[ggplot2 httr jsonlite lubridate plyr reshape reshape2 stringr]; }; - alphaOutlier = derive2 { name="alphaOutlier"; version="1.1.0"; sha256="0agca8dbypp2r08x7b4pscyz280m4l27ckkcvg1plk412v0n8dq8"; depends=[nleqslv quantreg Rsolnp]; }; + alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; }; + alphabetr = derive2 { name="alphabetr"; version="0.2.2"; sha256="1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r"; depends=[clue dplyr multicool Rcpp]; }; alphahull = derive2 { name="alphahull"; version="2.1"; sha256="129b2j9j60p2wvbb8703x18pydv1g715vmjcb1a80v70i93w4f49"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; }; alphashape3d = derive2 { name="alphashape3d"; version="1.2"; sha256="1apbirffqipdj618qgqh7vjlhg9fp6ncxb0yk4dclpn7g645863x"; depends=[geometry rgl]; }; alr3 = derive2 { name="alr3"; version="2.0.5"; sha256="0zrrsv2kjq3cky3bhk6gp32p1qpr1i5k2lx7c1w08bql0nb1x740"; depends=[car]; }; alr4 = derive2 { name="alr4"; version="1.0.5"; sha256="0m8jgc4mfni17psf8m0avf0m364vcq5k3c9x807p98ch2z5nsygv"; depends=[car effects]; }; - altmeta = derive2 { name="altmeta"; version="1.0"; sha256="1rca3qkx8ba39qjf35wmshdgdx0wmkpcmid22fvjbkkl8vr2m4h3"; depends=[]; }; + altmeta = derive2 { name="altmeta"; version="2.2"; sha256="1k3p06v8ccj0dbjfpl4nw6579bwcy4j925rk15v55khqmrlx780l"; depends=[]; }; amap = derive2 { name="amap"; version="0.8-14"; sha256="1dz37z9v4zvyvqrs4xvpfv468jwvpxav60qn2w0049bw8llj6xdl"; depends=[]; }; - ameco = derive2 { name="ameco"; version="0.2.2"; sha256="1r2gnd4mq3vdil8igh5n50yldz0g8g3syv4xv757fymwg6w7lk7g"; depends=[]; }; + ameco = derive2 { name="ameco"; version="0.2.6"; sha256="1jbkw79kv6b83kv1s2id2xrljzbz25bc7yqld3p8dfpngcpmgvq8"; depends=[]; }; amei = derive2 { name="amei"; version="1.0-7"; sha256="0dyx6a1y5i0abwka0y89d0mpj55rm5ywb4r9c2mqmy43djp181hn"; depends=[]; }; amen = derive2 { name="amen"; version="1.1"; sha256="084bl46sxn2sxslcpi9lm22k6x8cz1jld228l0iardy4vmh4cxdk"; depends=[]; }; aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; + ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; anacor = derive2 { name="anacor"; version="1.0-6"; sha256="0nq3jhai586d3980y8raqmbhh8snd5bpx5z8mlwrxvkmr62hcrpl"; depends=[car colorspace fda rgl scatterplot3d]; }; - analogsea = derive2 { name="analogsea"; version="0.3.0"; sha256="14mh9lbbzxv75aprm2gixz05pyy5lh46ysflkdnnnpj2c5mpj2k9"; depends=[httr jsonlite magrittr yaml]; }; + analogsea = derive2 { name="analogsea"; version="0.5.0"; sha256="1lfa8vl42n2wjl8r4m0144sircrrdvcanjd85l5m54r4vack846p"; depends=[httr jsonlite magrittr yaml]; }; analogue = derive2 { name="analogue"; version="0.17-0"; sha256="00wk4jnzif28ibx9s3m68qdx64ycdgg5yr6ybb0srlydikvf1sy8"; depends=[brglm lattice MASS mgcv princurve vegan]; }; - analogueExtra = derive2 { name="analogueExtra"; version="0.1-0"; sha256="0hyl0vn2i594r5czzha7y9a1n4dpznfpmh2j46mci2r57p2s3qr2"; depends=[analogue rgl vegan3d]; }; + analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; + analytics = derive2 { name="analytics"; version="1.0"; sha256="1f5jmc0j3r8y401d9j0acl83d3mp63a2n4hsmxznph2vva9y9kxc"; depends=[cluster MASS powerplus]; }; analyz = derive2 { name="analyz"; version="1.4"; sha256="0qdh1gld2dkl0krbhm2vcqg8dfs03dn51rclgsw02554s06dlgxw"; depends=[]; }; - anametrix = derive2 { name="anametrix"; version="1.6"; sha256="14xrrnvz7jn1jqds48l5pvzlx6hsaxrjc932lqnvv70sfypinjkm"; depends=[pastecs RCurl XML]; }; + anametrix = derive2 { name="anametrix"; version="2.0.0"; sha256="1dnmz7mpm1rsw61a39pkby0jsiprwk0g74h09g3r4vbn4k93r375"; depends=[dplyr plyr RCurl XML]; }; anapuce = derive2 { name="anapuce"; version="2.2"; sha256="0qs27as628090k3sq5b14l90g7qdp23d0jz5lb1wxsgi3ji0f7qj"; depends=[]; }; anchors = derive2 { name="anchors"; version="3.0-8"; sha256="12gd2526y7s2a8i6b9xma2c3sc6zxnwzl6sn8b50hbxizwr8d34j"; depends=[MASS rgenoud]; }; andrews = derive2 { name="andrews"; version="1.0"; sha256="130i86qkdy1xpcf611jpzqgmd17iik7j7spdcfwzk48f31biyp8v"; depends=[]; }; - anesrake = derive2 { name="anesrake"; version="0.70"; sha256="17127rmjfrdwnr2m6205cci3b0kd9girp82qranxwac4mgb7p7ld"; depends=[Hmisc]; }; + anesrake = derive2 { name="anesrake"; version="0.75"; sha256="1blq1blyq122jlj2yp8l7gam49q6h1wg6c9v0kkfkmnh5dwgz3mm"; depends=[Hmisc weights]; }; anfis = derive2 { name="anfis"; version="0.99.1"; sha256="1v8di5dzwb1g1ldi7idcmmr9nirp9kxvc8km1qq1i8zaw1bh8pqb"; depends=[]; }; + aniDom = derive2 { name="aniDom"; version="0.1"; sha256="0nffgszifar9da8310ymhfns19xnnnjh49rlvaxxk711h0a72fc5"; depends=[rptR]; }; anim_plots = derive2 { name="anim.plots"; version="0.1"; sha256="0qjwmxpkvjf27parh1fvhrkiczm4zlv9c034dp04yysbdz65r1by"; depends=[animation]; }; animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; }; animation = derive2 { name="animation"; version="2.4"; sha256="092xqnnr16rdf9yx68l6qgq4gg2ghdk31s4liycx71kvn6kr3vss"; depends=[]; }; + anocva = derive2 { name="anocva"; version="0.1.0"; sha256="1kira0bs3yjmsq7zrd4y5zzl948pz3rgbfsvkzidi2n6vvcl5344"; depends=[cluster]; }; anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; anominate = derive2 { name="anominate"; version="0.5"; sha256="0qhq3ngxi1d3yln6bafg3c36a7whnznnww0101da2y0i6dw79lg5"; depends=[coda MCMCpack oc pscl wnominate]; }; anonymizer = derive2 { name="anonymizer"; version="0.2.0"; sha256="0zlzxcqy8fjhh6ab58a1pi0k686dzgap58d160ms6bsr5mgn3fbf"; depends=[]; }; antitrust = derive2 { name="antitrust"; version="0.95.1"; sha256="14qz4c78lyfhgh3xyybn2sb8kl4rjzvb3dwrwxl9dzjmk5k6ab7i"; depends=[BB evd ggplot2 MASS numDeriv]; }; + anytime = derive2 { name="anytime"; version="0.2.1"; sha256="0grz40c4wv8z174b7avrj2fcfbr3clmvbrqjgmvi6x3ww6sqfppm"; depends=[BH Rcpp]; }; aod = derive2 { name="aod"; version="1.3"; sha256="1a6xs5d5289w69xd2salsxwikjjhjzvsnplqrq78b1sr6kzfyxz3"; depends=[]; }; aods3 = derive2 { name="aods3"; version="0.4-1"; sha256="074c16wmgd1vc2yvwx1y84bg55hvmm5yi8zgpwh51jcsbqlhbpgn"; depends=[boot lme4]; }; aoos = derive2 { name="aoos"; version="0.4.0"; sha256="16kkgbk54fqn18pm2psw6v1g71vl8xrc9mk0na5zh83ag69cjqcz"; depends=[magrittr roxygen2]; }; - aop = derive2 { name="aop"; version="0.99.5"; sha256="1mncia5m79m1nw2kwfsrf62i2dlmxdcwj0rrrs95s51b7c6d369h"; depends=[graph igraph Rgraphviz rjson]; }; + aop = derive2 { name="aop"; version="1.0.0"; sha256="1i3mixiwcvqygbcvj6f9vm223plmydzmixpy6nhis2zv9d90vakd"; depends=[ggplot2 graph igraph plyr Rgraphviz rjson]; }; aoristic = derive2 { name="aoristic"; version="0.6"; sha256="0b9h2l59vvrvbjjwwb43j74frvwa8lsj4x5kwhwpsfjfch1yqwjl"; depends=[classInt ggplot2 GISTools lubridate maptools MASS plotKML RColorBrewer reshape2 rgdal sp spatstat]; }; apTreeshape = derive2 { name="apTreeshape"; version="1.4-5"; sha256="0mvnjchhfbpbnrgnplb6qxa7r2kkvw29gqiprwggkf553wi6zl48"; depends=[ape quantreg]; }; - apaStyle = derive2 { name="apaStyle"; version="0.2"; sha256="1vkbjlqn36f51yn7vmrcm74airi3mc5i70h2848gcb87f7zcwbh9"; depends=[ReporteRs]; }; + apa = derive2 { name="apa"; version="0.1.0"; sha256="1a5xhybx43xgwf68fkxrqwj6azj70jpsrp2fwi1m7gvn4klcv3wh"; depends=[dplyr magrittr purrr rmarkdown stringr]; }; + apaStyle = derive2 { name="apaStyle"; version="0.4"; sha256="0ckxp37p1aizvs5sql54xvpimhq4m4944x18ihqffhpzb3dxw1ba"; depends=[ReporteRs]; }; apaTables = derive2 { name="apaTables"; version="1.0.4"; sha256="1ncs79n0jvr6m9gmaazi5d9g2c6c6hf8alrb45z8fy8sj9bj51hn"; depends=[car MBESS rockchalk]; }; - apc = derive2 { name="apc"; version="1.2"; sha256="1977d17sxky256jdh0ikyrm3d7kdn4kl5170jxc63nwdfnmh2ns3"; depends=[lattice]; }; + apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; }; apcluster = derive2 { name="apcluster"; version="1.4.3"; sha256="1pqcxh83189388qqc6cngqnsygvpx4kjy0j2r8ykcgxvdwi8r58m"; depends=[Matrix Rcpp]; }; - ape = derive2 { name="ape"; version="3.4"; sha256="11cfw02gm5i21p4k7c8sfg9xmzg57bn9n6zr2j1wryily31gifsz"; depends=[lattice nlme]; }; - apex = derive2 { name="apex"; version="1.0.1"; sha256="188hczb39dqi6xq2hbwhgas9jj9y7bbcsdz0kczimkbqwd9rz7cp"; depends=[adegenet ape phangorn]; }; - aplore3 = derive2 { name="aplore3"; version="0.7"; sha256="1xj3k13wjpsydcrai474b94kyj298islzfpfwn8n51k67h8r4l08"; depends=[]; }; + apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; + ape = derive2 { name="ape"; version="4.1"; sha256="0959fiiy11rzfzrzaknmgrx64bhszj02l0ycz79k5a6bmpfzanlk"; depends=[lattice nlme]; }; + apex = derive2 { name="apex"; version="1.0.2"; sha256="0p2sjpjg3b6i0ya99hkx2vl40w97k34z0z6ccnz08sfg3fyjiv24"; depends=[adegenet ape phangorn]; }; + aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; aplpack = derive2 { name="aplpack"; version="1.3.0"; sha256="0i6jy6aygkqk5gagngdw9h9l579lf0qkiy5v8scq5c015w000aaq"; depends=[]; }; apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[aroma_light Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; appell = derive2 { name="appell"; version="0.0-4"; sha256="0g7pzhxqgscnyf07xycbrpyimp1z1hljgcr3nqigpx09w7zi5wlw"; depends=[]; }; @@ -2881,149 +3528,191 @@ in with self; { approximator = derive2 { name="approximator"; version="1.2-6"; sha256="165qvx5946wkv1qsgbmjhmwvik7m23r1vbpnp7claylflgj1ycnm"; depends=[emulator]; }; aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; }; apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; }; - aprof = derive2 { name="aprof"; version="0.3.1"; sha256="1zlpx72lhrc0jwfr4qydh64gvmwy52krfym1slz51r51w31q84x9"; depends=[]; }; + aprof = derive2 { name="aprof"; version="0.3.2"; sha256="1rv7nr1y7jdvj2p8c6p67sn11bvmif2kj70fb2029hnsjk7lm15b"; depends=[]; }; apsimr = derive2 { name="apsimr"; version="1.2"; sha256="14vhsm6am2c2q2sgabnhxr0lgldifss0anjpisrhjqk04njllviy"; depends=[ggplot2 lubridate MASS mgcv reshape2 XML]; }; apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; }; apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; - aqp = derive2 { name="aqp"; version="1.9.3"; sha256="0805d05dvid7s67anlrw61bsdz21hii2c41ar9q8377rzvb4cfsd"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.10"; sha256="1c8vj10mygsrlixx4pwfs1xk69bvhdi37hl4p1v6g3nwvsr8f7ac"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; - archdata = derive2 { name="archdata"; version="1.0"; sha256="1hs2pgdaixifqjnwcbrjxlrzng0r2vmv6pdzghsyvzlg28rnq2rk"; depends=[]; }; + arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; + arc = derive2 { name="arc"; version="1.0"; sha256="1arms8crr198i4niq1wvp8ig474hlgjx63q0m96f8w6fsz63knqy"; depends=[arules discretization Matrix R_utils]; }; + archdata = derive2 { name="archdata"; version="1.1"; sha256="07ca51kl5imy6d9s0qi501xxl3zn4q3gbm0w8kvznfw8imclq17z"; depends=[]; }; archetypes = derive2 { name="archetypes"; version="2.2-0"; sha256="1djzlnl1pjb0ndgpfj905kf9kpgf9yizrcvh4i1p6f043qiy0axf"; depends=[modeltools nnls]; }; archiDART = derive2 { name="archiDART"; version="1.4"; sha256="1ymk56w07jj51p2r4g7qa4a3nyhnjrbn6igxgn6644mm0v118b8h"; depends=[XML]; }; - archivist = derive2 { name="archivist"; version="2.0.3"; sha256="13yncsy3g213d9x6wsm05kaxkccfwwa6l9phc13asajw7dyiwirb"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; }; - archivist_github = derive2 { name="archivist.github"; version="0.1"; sha256="0s6b5fcghm307n0z4pa6m1kg9a3w1cnlhy1hcs36pmbvlid6xva6"; depends=[archivist digest git2r httr jsonlite]; }; + archivist = derive2 { name="archivist"; version="2.1.2"; sha256="1d6bm9hdaj1lfbismv50qdzz3v91pvw28ijjxvhnaa4yqq9qh967"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; }; + archivist_github = derive2 { name="archivist.github"; version="0.2.2"; sha256="04xb2i47y12ic87gb2l30bldil0505h7s9601hq0afjg3npx6jq7"; depends=[archivist digest git2r httr jsonlite]; }; arf3DS4 = derive2 { name="arf3DS4"; version="2.5-10"; sha256="12cbrk57c9m7fj1x7nfmcj1vp28wj0wymsjdz8ylxhm3jblbgmxc"; depends=[corpcor]; }; arfima = derive2 { name="arfima"; version="1.3-4"; sha256="0348zkr8h5la1vh66fifl1fn21hp03k34zv5ga29crmwvvsvk8pi"; depends=[ltsa]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; - argparse = derive2 { name="argparse"; version="1.0.1"; sha256="03p8dpwc26xz01lfbnmckcx6wzky43dyq71085b0anzsavgx0786"; depends=[findpython getopt proto rjson]; }; - argparser = derive2 { name="argparser"; version="0.3"; sha256="1lwlkrh8hq4p02jmb76nss9qjrgyf5fqqzifv9z8ff1lk7szgmy4"; depends=[]; }; - arm = derive2 { name="arm"; version="1.8-6"; sha256="1bdjzq1da9nwfll4ial74ln920f2i19n4mwc5f4a5lwqrk4c69c7"; depends=[abind coda lme4 MASS Matrix nlme]; }; + argparse = derive2 { name="argparse"; version="1.0.4"; sha256="1qyca2kmvks338v48g7bqzg3gc6vn3cynwn77liqk42kwd327g8g"; depends=[findpython getopt proto rjson]; }; + argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; }; + arm = derive2 { name="arm"; version="1.9-3"; sha256="00773z8ai07s9wa2annzjqrxml3z13fh9zqls0z1n7s3h8fwrvqw"; depends=[abind coda lme4 MASS Matrix nlme]; }; arnie = derive2 { name="arnie"; version="0.1.2"; sha256="14xkgyfn9zvkbgram15w7qzqc5pl1a8ig66cif7a79najrgd914r"; depends=[]; }; aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.0.0"; sha256="1i6swcg13sajsr2r49ga3qnkiza87ql49v96mjwaj0s5x23szknp"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; aroma_apd = derive2 { name="aroma.apd"; version="0.6.0"; sha256="1l9p5qww71h6wlg2z15wirsfz2i7hmf637l17zaf3n7fp9s3flc7"; depends=[R_huge R_methodsS3 R_oo R_utils]; }; aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; aroma_core = derive2 { name="aroma.core"; version="3.0.0"; sha256="0y0hydf2b2fp2dn2fqxbdqsf2r04rk7y1s2wwm1dg3p6nzsgnypk"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; - arrApply = derive2 { name="arrApply"; version="1.0.4"; sha256="0sm0msprajh6mc36pjc8dkhiqmk6553gra43p5kg444lfw57yd57"; depends=[Rcpp RcppArmadillo]; }; - arrayhelpers = derive2 { name="arrayhelpers"; version="0.76-20120816"; sha256="1q80dykcbqbcigv2f9xg1brfm3835i0zvs0810q6kh682a3hpqbi"; depends=[]; }; + arrApply = derive2 { name="arrApply"; version="2.0.1"; sha256="007fsqgb9bsr4mscljhp37dvrk7cv6nrb7y28w8kc7mxvgdq29wg"; depends=[Rcpp RcppArmadillo]; }; + arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; ars = derive2 { name="ars"; version="0.5"; sha256="0m63ljb6b97kmsnmh2z5phmh24d60iddgz46i6ic4rirshq7cpaz"; depends=[]; }; - artfima = derive2 { name="artfima"; version="1.2"; sha256="1a4kagi3lh8fbs75zy30hbd4jcm88a9ngrxj52l97hb910w20wz1"; depends=[gsl ltsa]; }; - arules = derive2 { name="arules"; version="1.4-0"; sha256="1xgawdl3zb4hlydqwqwffjh9d8k1iwpcr43bkhz9v8hs7capn948"; depends=[Matrix]; }; + arsenal = derive2 { name="arsenal"; version="0.2.0"; sha256="1rwzgza4dy1xyi0p157yfhwr1bwwk6bxbkb31752av34nvddl4cm"; depends=[broom stringr]; }; + artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; + arules = derive2 { name="arules"; version="1.5-0"; sha256="0x75ggaaqnhikkpk2rhwnzbg1lakch7kykw6q9iw6wzvq8qbmnmi"; depends=[Matrix]; }; + arulesCBA = derive2 { name="arulesCBA"; version="1.0.2"; sha256="0sckrw702ah5dphbixfinnb0g9sca7r12k91c564aigfj3yspc1s"; depends=[arules caret Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; - arulesViz = derive2 { name="arulesViz"; version="1.1-0"; sha256="0kapvhrbxsn8pw6gfabnswzzgwgs621riq54xrlswicn5p2ywgxy"; depends=[arules colorspace igraph scatterplot3d seriation vcd]; }; + arulesSequences = derive2 { name="arulesSequences"; version="0.2-17"; sha256="1ch2k70k713h5vr3g7ddzv1bsgpyiaf6i6jjf7jmvcc4m6pcg2s1"; depends=[arules]; }; + arulesViz = derive2 { name="arulesViz"; version="1.2-0"; sha256="1vdcrqw5m4ca379y4xapz8azifnv608lna0mx3kl7zi6iy8ysn61"; depends=[arules colorspace DT igraph plotly scatterplot3d seriation vcd]; }; + as_color = derive2 { name="as.color"; version="0.1"; sha256="1y5qpm0pabfk5qvgx6s2vqqxfhp1x99g7dva24zay34nvf4bxrzn"; depends=[]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; - asaur = derive2 { name="asaur"; version="0.44"; sha256="08f04vvd0v22l56mq1f0nmpi5qr085kc2lax3yd74jxcybn5nrnk"; depends=[]; }; - asbio = derive2 { name="asbio"; version="1.3-1"; sha256="1avzy32fblvn977ciri96gr1b8iia3yc3546n69c8lvy3ybdp4fb"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; + asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; + asbio = derive2 { name="asbio"; version="1.3-4"; sha256="02jpbc4lsca6bvp8ljv7nb452diz7maas6y3kjg07v3hgmwrkwvy"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; ascii = derive2 { name="ascii"; version="2.1"; sha256="19dfbp7k4bjxjn8wdzhbmz7g3za6gn8vcnd5qkm4dz7gg1fg7b8p"; depends=[]; }; - asd = derive2 { name="asd"; version="2.0"; sha256="1nnsbh6g0bhvhp6644zf2l6frr3qnls0s7y7r0g211b5zagq20z3"; depends=[mvtnorm]; }; + asd = derive2 { name="asd"; version="2.2"; sha256="0p3r4qjam3sl3rpcilb0pgx4xx3ly71xqnvkv31vzjs885lgxz4l"; depends=[mvtnorm]; }; asdreader = derive2 { name="asdreader"; version="0.1-2"; sha256="0lfm0c5nzm276zaaxxwkpkqca5xg9r6ysfpgl6wvdbbvs9s83x4a"; depends=[]; }; ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; }; - asht = derive2 { name="asht"; version="0.5"; sha256="04wlvn4j8c8c3sxsa9ydb1garb7px768xvrnr6ywhb722srwi5gy"; depends=[bpcp coin exact2x2 exactci ssanv]; }; - asnipe = derive2 { name="asnipe"; version="0.85"; sha256="0mp8gbi0390hdrdyhsmyj100w1zzzj78cyilkr9fzp176qqy1b6c"; depends=[]; }; + ashr = derive2 { name="ashr"; version="2.0.5"; sha256="0blr19ipcanwjxizilkd8hb37dlhb6idjcw2lf0ll8pkd2l68f5z"; depends=[assertthat doParallel etrunct foreach pscl Rcpp SQUAREM truncnorm]; }; + asht = derive2 { name="asht"; version="0.8"; sha256="0j8fabrdpnp7y8pa7crjx976hngyvm2zy0chdp4p44pgcs4dn071"; depends=[bpcp coin exact2x2 exactci ssanv]; }; + aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; + asnipe = derive2 { name="asnipe"; version="1.1.3"; sha256="1kg58k52wiwcqgxgzsvrcn10j5gcl395mw4vky4k85kmcw1h63ks"; depends=[MASS Matrix]; }; aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-4"; sha256="1kxddm8v1y0v2r7lg24r1wpzk7lqzxlrpzq5xb9kn343g53lny6i"; depends=[]; }; - asremlPlus = derive2 { name="asremlPlus"; version="2.0-3"; sha256="0by2d8inwgyi79gqiivgxkm1xxy58jzyp4n76q21kwzqxj8agjgk"; depends=[dae ggplot2]; }; - assertive = derive2 { name="assertive"; version="0.3-2"; sha256="11zyia1pynr82zc98cdlv7zfpg7ncx0gg2a4ry7sy5n06l4nvcrs"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; - assertive_base = derive2 { name="assertive.base"; version="0.0-5"; sha256="0w43pplkqc51cxpfhni7q4hiqy6pq5s7rhwi9ja73yfglrh1rnrk"; depends=[]; }; + aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; + asremlPlus = derive2 { name="asremlPlus"; version="2.0-12"; sha256="119r7wwrz11j85idq21xdp2wq7l2jly73q3179d3bsywbmx5sr17"; depends=[dae ggplot2]; }; + assertable = derive2 { name="assertable"; version="0.2.1"; sha256="0q204l1wlnwvlf72lzaqfxf5x88h53c8zva5vmiq0c825h2v67an"; depends=[data_table]; }; + assertive = derive2 { name="assertive"; version="0.3-5"; sha256="0blbbhlxcb5ffdxqxi62xs33ljiawh6s22a0pyvbbh79jf46rzr3"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; + assertive_base = derive2 { name="assertive.base"; version="0.0-7"; sha256="1xs3ysvj0z57c58jw57pckq2rynia6ks4rmjmc02alczhk54wbgh"; depends=[]; }; assertive_code = derive2 { name="assertive.code"; version="0.0-1"; sha256="0drdrc9ljznkz52lvpwx0mvrghl0wf6dffzc3msz8lnvraxmanyw"; depends=[assertive_base assertive_properties assertive_types]; }; assertive_data = derive2 { name="assertive.data"; version="0.0-1"; sha256="0pjw7rf76d99awd8i4krmhbyks39lx89c9pb4j49nmz3w6x3z233"; depends=[assertive_base assertive_strings]; }; assertive_data_uk = derive2 { name="assertive.data.uk"; version="0.0-1"; sha256="0z2hpvfl34zzy9sncmihcj1ir5nnm9d05j7ip7j83by2pfwsjdhf"; depends=[assertive_base assertive_strings]; }; assertive_data_us = derive2 { name="assertive.data.us"; version="0.0-1"; sha256="0nfwfkaczbmxaj4bpyibcvsypigkn5j2syn2wb4d2grm7virk9bk"; depends=[assertive_base assertive_strings]; }; - assertive_datetimes = derive2 { name="assertive.datetimes"; version="0.0-1"; sha256="1fm85kzpdfzg8f6c7janpk5p6s4llk9yghmiwwqm54d4dgjkav10"; depends=[assertive_base assertive_types]; }; - assertive_files = derive2 { name="assertive.files"; version="0.0-1"; sha256="0fc0qki4kpdq0zw51s2xc9gxrzsngx4mb859m8x16k2phmy83z1z"; depends=[assertive_base assertive_numbers]; }; + assertive_datetimes = derive2 { name="assertive.datetimes"; version="0.0-2"; sha256="00a98fx8p3pr3ckayh8wmxmm4rz01s67wah9697m92yci6pv3m78"; depends=[assertive_base assertive_types]; }; + assertive_files = derive2 { name="assertive.files"; version="0.0-2"; sha256="02pfz8j5vwcj5kl6zca46894li7lxwnlrr29j922f14ay6kdssmy"; depends=[assertive_base assertive_numbers]; }; assertive_matrices = derive2 { name="assertive.matrices"; version="0.0-1"; sha256="1vk0i860r87rc5x0navai8xx9ixqyp96waxlk6j5p8y8hrpiyyif"; depends=[assertive_base]; }; assertive_models = derive2 { name="assertive.models"; version="0.0-1"; sha256="1pkyssavld57njmv545bfa3a7dmyrgpsvr9vdhqmrmcpc55w89cj"; depends=[assertive_base]; }; - assertive_numbers = derive2 { name="assertive.numbers"; version="0.0-1"; sha256="0wsnk6nxcxhbq09gzrp3g7l4nzxyhkbxiyv4yzh1hqqqry066hsa"; depends=[assertive_base]; }; - assertive_properties = derive2 { name="assertive.properties"; version="0.0-2"; sha256="1bh9h56zq6yrhvsjm9pzdz30f2hb1k51rvsn9y1ifhn8syvzvpnf"; depends=[assertive_base]; }; - assertive_reflection = derive2 { name="assertive.reflection"; version="0.0-2"; sha256="1mr1fi3ij8srpgl812imi0jyi44gnyhrrr4x5s1lwn4mwzjw657r"; depends=[assertive_base]; }; - assertive_sets = derive2 { name="assertive.sets"; version="0.0-2"; sha256="0azs5nqzm03m1f5yhci49y51phnw85yk2yk9a8qka3mcd0kin9rw"; depends=[assertive_base]; }; - assertive_strings = derive2 { name="assertive.strings"; version="0.0-2"; sha256="0181mj61fjj3gz74zwr6cb4mq7fclsbyh1zdlnpfmy3vzpmcpsb5"; depends=[assertive_base assertive_types]; }; - assertive_types = derive2 { name="assertive.types"; version="0.0-2"; sha256="0s2yq8ycrmpr5m35psz4546shrcp5q1rz28pmh3s5f5y7gvqidxa"; depends=[assertive_base assertive_properties]; }; - assertr = derive2 { name="assertr"; version="1.0.0"; sha256="0z7cgksjc0a7niar9f26f0512ln0a7cifyqcfrbhar552dnkg33i"; depends=[dplyr lazyeval MASS]; }; + assertive_numbers = derive2 { name="assertive.numbers"; version="0.0-2"; sha256="0jc3ss64j4m7bjydhagwwmka5n7c72vpw4kfcch0m5jvkq5qrqds"; depends=[assertive_base]; }; + assertive_properties = derive2 { name="assertive.properties"; version="0.0-4"; sha256="0sqs54acs9qk9kvm32rxzfbzxz1l8mjahpfnw7r30z2brgz661jw"; depends=[assertive_base]; }; + assertive_reflection = derive2 { name="assertive.reflection"; version="0.0-4"; sha256="19zmsbn00crfqm0kwd9ys5gv87xs3gi6wmlikrz9xiwzm7hp4dhj"; depends=[assertive_base]; }; + assertive_sets = derive2 { name="assertive.sets"; version="0.0-3"; sha256="1cqvh2syvh5b6d85h601zjmsdbbf3h8q98ids4dfl4frdshpasc7"; depends=[assertive_base]; }; + assertive_strings = derive2 { name="assertive.strings"; version="0.0-3"; sha256="0n6jrk88670g4ym0r8ii40a08a90z1xadj8wcryk8h0nl04dchfm"; depends=[assertive_base assertive_types stringi]; }; + assertive_types = derive2 { name="assertive.types"; version="0.0-3"; sha256="0zxq1jfrzgw95ll7alvm0xnk7aihjdksngq4ya2whyvfjbmv4vdb"; depends=[assertive_base assertive_properties codetools]; }; + assertr = derive2 { name="assertr"; version="1.0.2"; sha256="1l0j0jxg5dr6c1hkigwpmr04df30s0cqpy64brrkl8jkwf4c1ji1"; depends=[dplyr lazyeval MASS]; }; assertthat = derive2 { name="assertthat"; version="0.1"; sha256="0dwsqajyglfscqilj843qfqn1ndbqpswa7b4l1d633qjk9d68qqk"; depends=[]; }; + assignPOP = derive2 { name="assignPOP"; version="1.1.1"; sha256="11786lxnrwi4gb1nddk8bkz7h9wyjiav8gajss43cybhiwpcy0p1"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; assist = derive2 { name="assist"; version="3.1.3"; sha256="0ngnn75iid5r014fcly29zhcfpqkqq24znncc3jdanbhdmfyybyz"; depends=[lattice nlme]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; aster = derive2 { name="aster"; version="0.8-31"; sha256="1rn9hp7dg81rd14ckmfz23aav3ywm7i3w46jx66kqbrfs7kdrslq"; depends=[trust]; }; aster2 = derive2 { name="aster2"; version="0.2-1"; sha256="1gr9hx0mhyan0jy7wsl4ccsx9ahlvhfiq0j1xnffa4m3hzazisn5"; depends=[]; }; astro = derive2 { name="astro"; version="1.2"; sha256="1c7zrycgj2n8gz50m94ys1dspilds91s1b2pwaq6df1va17pznby"; depends=[MASS plotrix]; }; astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; }; - astrochron = derive2 { name="astrochron"; version="0.5"; sha256="16zgjc5x5dzscvb1cki65p23c3kp1rad2x82bjcr4i0hg8xqs4ig"; depends=[fields IDPmisc multitaper]; }; + astrochron = derive2 { name="astrochron"; version="0.6.5"; sha256="141nw03ggxc4p297g799kvk15sa6n5apf733kg7w9bbfgqwm4aa5"; depends=[fields IDPmisc multitaper]; }; astrodatR = derive2 { name="astrodatR"; version="0.1"; sha256="00689px4znwmlp6qbj6z2a51b7ylx1yrrjpv6zjkvrwpv6lyj9fw"; depends=[]; }; astrolibR = derive2 { name="astrolibR"; version="0.1"; sha256="0gkgry5aiz29grp9vdq9zgg6ss47ql08nwcmz1pfvd0g0h9h75l8"; depends=[]; }; - astsa = derive2 { name="astsa"; version="1.3"; sha256="01bslr6hww029097244r5l4bz4v7z46gpihw39har8h0xicl6ywk"; depends=[]; }; + astsa = derive2 { name="astsa"; version="1.7"; sha256="1rzl1ayzv8lnn2009j4v667pp8sxdbn7qbqqyjpq00c75f4wss6x"; depends=[MASS]; }; asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; }; + asymmetry = derive2 { name="asymmetry"; version="1.2"; sha256="08xq0m3z0z8j875792hx6c3i7ssdxi62mbnpchsvwwa930nzdk3j"; depends=[gplots rJava smacof]; }; asympTest = derive2 { name="asympTest"; version="0.1.3"; sha256="11nlkgws3y8xbz3yli55414a2rkk7367q9q5r2ssa61jaiimibhh"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; atsd = derive2 { name="atsd"; version="1.0.8441"; sha256="1jz2bdgvk1wamrm8r9ygprhyf0z3mdk9c1pwlb4bfmwvbnqd0yqa"; depends=[httr RCurl]; }; + attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; }; attribrisk = derive2 { name="attribrisk"; version="0.1"; sha256="1zqx53mxz2hh9jyanf3jkadgpj44jbqrk4p13fas91zvhpw9pn5s"; depends=[boot survival]; }; auRoc = derive2 { name="auRoc"; version="0.1-0"; sha256="1ijk127p6g5mzc7b4b9lnjnfzvklz3g8w6bckrdahlw7djd9mgz1"; depends=[coda MBESS ProbYX rjags]; }; aucm = derive2 { name="aucm"; version="2016.1-2"; sha256="1nyxxyivs6inq8r18x7fl3zkpn75sczwnbzsv672nzdlqj5d2b5f"; depends=[kyotil]; }; audio = derive2 { name="audio"; version="0.1-5"; sha256="1hv4052n2r6jkzkilhkfsk4dj1xhbgk4bhba2ca9nf8ag92jkqml"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; + autoSEM = derive2 { name="autoSEM"; version="0.1.0"; sha256="0s58dnpr7zyclk5vwaf7a2id6paqsnb224f0gpmj2nms4klsw323"; depends=[GA lavaan snowfall]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; + autoimage = derive2 { name="autoimage"; version="1.1"; sha256="0yi6n60b72qw20bp2hchxn653c3a9x2yvgawkqs31xbkq0s50rbc"; depends=[fields ggplot2 mapproj maps viridis]; }; automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; }; + automultinomial = derive2 { name="automultinomial"; version="1.0.0"; sha256="15cxnqaai2dln6jvk7lpfqvlpv5237zn18axp459p5zxcgg0lw88"; depends=[Hmisc igraph MASS Matrix]; }; autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; }; autovarCore = derive2 { name="autovarCore"; version="1.0-0"; sha256="08h51bh1m3d47nprd5z7v3k3lkrixbxwinr73zd5442wskf4x82v"; depends=[Amelia jsonlite Rcpp urca vars]; }; - averisk = derive2 { name="averisk"; version="1.0.1"; sha256="18gr7nv826sxh085rd8vqbg6isbhans47a2prff2rxwy9jjn8dvg"; depends=[MASS]; }; - aws = derive2 { name="aws"; version="1.9-4"; sha256="11vbsg4yhnl4995m8gq5gykrlk61y3a618g2zxkc9wdf5z4xqdny"; depends=[awsMethods gsl]; }; - aws_signature = derive2 { name="aws.signature"; version="0.2.0"; sha256="0g2cxhvf27h1in9iwb74y85rg3w4w4py608f2ybdjgix3lxk60ag"; depends=[digest]; }; - awsMethods = derive2 { name="awsMethods"; version="1.0-3.1"; sha256="0iswk1ijnxwik66crcplldkbfp5flbgk15xap1ys2jp6nwhlw3qw"; depends=[]; }; + averisk = derive2 { name="averisk"; version="1.0.2"; sha256="0k7f0l7bx76q5x8cam2z0q6akc9a6zj0pj0644v8gbr40n2y5snz"; depends=[MASS]; }; + aws = derive2 { name="aws"; version="1.9-6"; sha256="0mfq44pji0p6d7s1wbwi0f97lsh3f33wnj8fiyimpg9fv8lr4inz"; depends=[awsMethods gsl]; }; + aws_alexa = derive2 { name="aws.alexa"; version="0.1.2"; sha256="0ddgsk8bj51dz43flkxha73m7cmqbi63bp4ascwd3yp8645jjx6h"; depends=[aws_signature httr plyr XML]; }; + aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.1.1"; sha256="0xzilzvrvzhna1iyhjb5r9k1wbd7545sc1yjcf69r35585gnm8rr"; depends=[curl jsonlite]; }; + aws_polly = derive2 { name="aws.polly"; version="0.1.2"; sha256="0ij0rbng8q7xfa08p4x1l1lcmskmz3fy2pvln28zxqbs6jbc22rm"; depends=[aws_signature httr jsonlite tuneR]; }; + aws_ses = derive2 { name="aws.ses"; version="0.1.4"; sha256="13hf4iqhnpkm9rnr7nzwky663vplnkjrgk90zix91cn2fvaspjgp"; depends=[aws_signature httr jsonlite]; }; + aws_signature = derive2 { name="aws.signature"; version="0.2.6"; sha256="0cd92kymlmcm1940s57p025blckbvavwx9rsrrsn13p7b03xwakf"; depends=[base64enc digest]; }; + aws_sns = derive2 { name="aws.sns"; version="0.1.5"; sha256="1l013yczlvgbi07xfdslfrwmnc39j58f6kfqwa8j4kdxb0h58lq4"; depends=[aws_signature httr jsonlite xml2]; }; + aws_sqs = derive2 { name="aws.sqs"; version="0.1.8"; sha256="1qgq2jbm523jb4qhzjbpq2f04saanwarz6nnhyn4g3dliv3fhsf6"; depends=[aws_signature httr jsonlite xml2]; }; + awsMethods = derive2 { name="awsMethods"; version="1.0-4"; sha256="0n4mxn9fkqkvv19mfaqhrmhwhmkxiahfnls47b5ki3a3gsr6cm8l"; depends=[]; }; + awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; }; aylmer = derive2 { name="aylmer"; version="1.0-11"; sha256="1b6dryvfz9yp00nj8lv8j1isnshcgwn9fx41knah9pw7dn4pxkk2"; depends=[Brobdingnag]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; bReeze = derive2 { name="bReeze"; version="0.4-0"; sha256="1znhmb2inbfv574adhwjwk3qf9kikrxrly4n6sfyim1z6sagnj0z"; depends=[]; }; - bWGR = derive2 { name="bWGR"; version="1.3.1"; sha256="0bfxizypi3nnkv2ycvlvsly9zhf0yyln2x10ayhgxgcj1abmg57y"; depends=[Rcpp]; }; + bWGR = derive2 { name="bWGR"; version="1.3.2"; sha256="0c0fj8w6gzkcbpfw68hvdp3ihjdwpnplqgnxnj7zp5cxac996vs8"; depends=[Rcpp]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; - babel = derive2 { name="babel"; version="0.2-6"; sha256="1dsxjnhr0cky7wlzz8pr8rn3cldfcyrh8v6gn2ba4abr0df7i4dd"; depends=[edgeR]; }; + babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babynames = derive2 { name="babynames"; version="0.2.1"; sha256="1knzr0pn77k8krinp8pmlzf07v8597g2iby4mayig91cna1m0psx"; depends=[]; }; - backShift = derive2 { name="backShift"; version="0.1.3"; sha256="0l4i3z7iwacr64g8n4gwjncxgmkcf5jz2w9l2xy3l90wlnfd15rp"; depends=[clue ggplot2 igraph jointDiag matrixcalc pcalg reshape2]; }; - backpipe = derive2 { name="backpipe"; version="0.1.5"; sha256="0syna8mpv4cxx7q4yii14qvnn60mx8nvyjnq81h4ffpavjg6wi6c"; depends=[]; }; - backports = derive2 { name="backports"; version="1.0.2"; sha256="136nyq06f4pincn85xqgqrf6lkhlqx0gynk4bz6d40va85iswwpp"; depends=[stringi]; }; + backShift = derive2 { name="backShift"; version="0.1.4.1"; sha256="1vixr9l9zqaqy0knahijp6y9vzix4m8bz3abiprk3v2pjzg5nrvm"; depends=[clue ggplot2 igraph jointDiag MASS matrixcalc mvnmle reshape2]; }; + backblazer = derive2 { name="backblazer"; version="0.1.0"; sha256="020kdydksm0brnxsa00blf5sylxd4hz49wmngk1x1fx43kdlyc41"; depends=[httr jsonlite openssl]; }; + backpipe = derive2 { name="backpipe"; version="0.1.8.1"; sha256="1nid5rbgwiq8axkrl2gwl4vr5bjq5k5nrhq7macddvijcn3r2dz8"; depends=[]; }; + backports = derive2 { name="backports"; version="1.0.5"; sha256="1pn1ii8vbkgxcqvx52kzsbwf9gkn9fp33388087zky2hmdzdirn0"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; backtestGraphics = derive2 { name="backtestGraphics"; version="0.1.6"; sha256="14l9dbkbcx4kl45kpjbq4ihzf47j859khhd1db40vnp8x57g9xcx"; depends=[dplyr dygraphs scales shiny xts]; }; - bacr = derive2 { name="bacr"; version="1.0"; sha256="1as9vfzwv8aix44mr0j3av0ghnqmmbcs6w0jpwbjrvxkb7bhxgdm"; depends=[MCMCpack]; }; + bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; + badgecreatr = derive2 { name="badgecreatr"; version="0.1.0"; sha256="070zb5jw817s9ykqc3dvzjqk48612gydkdc31svc0ji01s1y1545"; depends=[stringr]; }; bagRboostR = derive2 { name="bagRboostR"; version="0.0.2"; sha256="1k9w98p3ad3myzyqhcrc4rsn7196qvhnmk5ddx3fpd1rdvy2dnby"; depends=[randomForest]; }; - bamdit = derive2 { name="bamdit"; version="2.0.1"; sha256="105y4cayymqhd3f7dk297syv966pba9cjg6dx9jabcximicdw4l9"; depends=[ggplot2 gridExtra R2jags rjags]; }; + baitmet = derive2 { name="baitmet"; version="1.0.0"; sha256="0qrg3a5h5c0w8awnpnn1bfvgqqm4bylkwgjwq3l58xkfji6l0d08"; depends=[erah HiClimR osd Rcpp signal XML]; }; + bamdit = derive2 { name="bamdit"; version="3.0.0"; sha256="0hph6z3id4japk9ljgmn9ygbbswlj50viqllww4qsi2a5wxjls3f"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; + bamlss = derive2 { name="bamlss"; version="0.1-1"; sha256="1r34qgy0w0hx2q9bfc7bxzyjgnqn3wfb0r0ij3rkvdi5rzcrsw7z"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp spam survival]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; - bapred = derive2 { name="bapred"; version="0.3"; sha256="0jfg5cz8ra289z5mym621231cm43472gkiss7j66dbm3i4n94ygj"; depends=[FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; + bannerCommenter = derive2 { name="bannerCommenter"; version="0.1.0"; sha256="0ycx771g9a73w0sx8zzix8kswwbjagzhbyvaq7l5r8a9ayfli8ic"; depends=[]; }; + banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; + bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; - bartMachine = derive2 { name="bartMachine"; version="1.2.1"; sha256="0r6gr608y0xb14nlq1smwny79hnij4dmi4jsqxvsf97v3nzbgd4r"; depends=[bartMachineJARs car missForest randomForest rJava]; }; + bartMachine = derive2 { name="bartMachine"; version="1.2.3"; sha256="15bv7q64ifjdg5ppx7vp3i3agil6dwirk5cf02lc243hmlg5lk1i"; depends=[bartMachineJARs car missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.0"; sha256="1vnicq9amayxh69jqgly8jm7hvgjr22kvm1g6y2n7vphz70p9cq9"; depends=[rJava]; }; - base64 = derive2 { name="base64"; version="1.1"; sha256="1wn3zj1qlgybzid4nr6hvlyqg1rp2dwfh88vxrfby2fy2ba1nl5x"; depends=[]; }; + base64 = derive2 { name="base64"; version="2.0"; sha256="1labh0ycdm2xcjssj8bhnyjvbk44mcdsi0rb2p8rfqa428mrq9cf"; depends=[openssl]; }; base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; - basefun = derive2 { name="basefun"; version="0.0-30"; sha256="149s2giv1nj2l85lxzalah0c7h441v2kngjv2mj13fl1k8nbxgfl"; depends=[Matrix orthopolynom polynom variables]; }; + base64url = derive2 { name="base64url"; version="1.1"; sha256="1f0asnf5ri55q6mhjkv7lfhr2hncs65vrykmr80r5sxsha6bqndz"; depends=[backports]; }; + basefun = derive2 { name="basefun"; version="0.0-35"; sha256="12sakwz9g3w0w4di2i0l12nk5lmdniqhiq2nvmzbdy3vs4n06m3i"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; }; - basicspace = derive2 { name="basicspace"; version="0.17"; sha256="1aq2w3lk3ksb60x21cgwayf151nhfcwbcxskbxlgdzs3i2r00b48"; depends=[]; }; + basicspace = derive2 { name="basicspace"; version="0.18"; sha256="1jnylqaxgmdj9ld9q7hkmi4af8yzswaqgykbw96qzzxp9cvini1y"; depends=[]; }; + bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; batch = derive2 { name="batch"; version="1.1-4"; sha256="03v8a1hsjs6nfgmhdsv6fhy3af2vahc67wsk71wrvdxwslmn669q"; depends=[]; }; - batchmeans = derive2 { name="batchmeans"; version="1.0-2"; sha256="126q7gyb1namhb56pi0rv9hchlghjr95pflmmpwhblqfq27djss2"; depends=[]; }; + batchmeans = derive2 { name="batchmeans"; version="1.0-3"; sha256="1qkdljngvlahk0pbrkarkjh2g4sxxwiva9f3m5y8gz8pjw9fpy9n"; depends=[]; }; + batchtools = derive2 { name="batchtools"; version="0.9.2"; sha256="0hi2bxfx2gvsr1vssydi39595kxwb0qwk8w9xvwbhc7n92gc9bwf"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; + bayesAB = derive2 { name="bayesAB"; version="0.7.0"; sha256="1visjwxf7jc9z1m99dnplg01sbbx4w4cr6ykh3n1nzh5r9xinimm"; depends=[devtools ggplot2 plumber Rcpp reshape2]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; - bayesDem = derive2 { name="bayesDem"; version="2.5-0"; sha256="0iz4cysiqkyia61mslgbiczsqxlmdism3vkwihm50xly5g1fvhhk"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; - bayesGARCH = derive2 { name="bayesGARCH"; version="2.0.2"; sha256="1fl1sdila3b7a6ikmay1bxyx6am2mqa9nvf29b9r38002dj5ylz2"; depends=[coda mvtnorm]; }; - bayesLife = derive2 { name="bayesLife"; version="3.0-0"; sha256="0ssmg5yrwyx53lj8iicpnrngpn8gjdxd47xvndb110k7cqzkfyf0"; depends=[bayesTFR car coda hett wpp2015]; }; + bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; + bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; + bayesGDS = derive2 { name="bayesGDS"; version="0.6.2"; sha256="0ash16hmassn76x3f59dfvp4plqp8vb17qzcwmag7vi3mi3y2ap6"; depends=[Matrix]; }; + bayesImageS = derive2 { name="bayesImageS"; version="0.3-3"; sha256="08d7ffv1nr1q7syf8fxp40fczyl5i8xd2cyv3piqn40l7dlpckhj"; depends=[Rcpp RcppArmadillo]; }; + bayesLife = derive2 { name="bayesLife"; version="3.0-4"; sha256="1n15df1rsyad3ij7l6ib79q7yflgwaykxq8msbkaq4ly8fvyy72x"; depends=[bayesTFR car coda hett wpp2015]; }; bayesMCClust = derive2 { name="bayesMCClust"; version="1.0"; sha256="14cyvcyx3nmkbvsy7n4xjp7zvcgdhy013dv9d72y8j5dvlv82pb4"; depends=[bayesm boa e1071 gplots gtools MASS mnormt xtable]; }; - bayesPop = derive2 { name="bayesPop"; version="6.0-1"; sha256="0wkvvh7ad484cil736rg54ikcg9gdmpprz5y3ai91jjs7ri4mklw"; depends=[abind bayesLife bayesTFR fields googleVis plyr rworldmap wpp2012 wpp2015]; }; - bayesQR = derive2 { name="bayesQR"; version="2.2"; sha256="0w5fg7hdwpgs2dg4vzcdsm60wkxgjxhcssw9jzig5qgdjdkm07nm"; depends=[]; }; + bayesPop = derive2 { name="bayesPop"; version="6.0-4"; sha256="16i9h7zvym1mj1al3wzima3y4igxhwax03npgnypaxahi1sbiwha"; depends=[abind bayesLife bayesTFR fields googleVis plyr rworldmap wpp2012 wpp2015]; }; + bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="2.6"; sha256="0lam6w0niy30wgzbc3zrwbfz291whig20prjzdpcpv91syrnw687"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="5.0-1"; sha256="0zpjf2r48z9jsp97jml26ax57pc1mbbs2bvsih0b8j384npb95q8"; depends=[coda MASS mvtnorm wpp2015]; }; - bayesboot = derive2 { name="bayesboot"; version="0.2.0"; sha256="0l2wlj8sar1p404ikrq5z4738757cwiq7l2rj8dvxir33v0gil0q"; depends=[HDInterval plyr]; }; + bayesTFR = derive2 { name="bayesTFR"; version="5.0-5"; sha256="091yzazvj66g6l9997qgnybbhvidfd9gr1wj15b7r3ji0cigywkm"; depends=[coda MASS mvtnorm wpp2015]; }; + bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; + bayesboot = derive2 { name="bayesboot"; version="0.2.1"; sha256="0gd3in9z8kx3d29dvyd8blmhlc7wxxl5b2hxnrrq0w13jcnsn57w"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; + bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; }; + bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayesm = derive2 { name="bayesm"; version="3.0-2"; sha256="014l14k8fraxjqfch2s6ydgp1mcljvj4cgrznjyz2l35fwj3rcf3"; depends=[Rcpp RcppArmadillo]; }; - bayesmeta = derive2 { name="bayesmeta"; version="1.1"; sha256="15f81n8pnrq1s49gw0bzkc8gawn7m2rj5d24bbxak64jkxclgkd9"; depends=[]; }; + bayesmeta = derive2 { name="bayesmeta"; version="1.4"; sha256="0ks0g7jdr2jqm7nwbm0p34nk8hm9746nldf0kyzgkl7vb29jb9f1"; depends=[forestplot]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; + bayesplot = derive2 { name="bayesplot"; version="1.1.0"; sha256="0c71ma6v6b44j39x7z44wyashnpd8xdwj3hrvvjafx473pgmbx4s"; depends=[dplyr ggplot2 reshape2]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; + bayesreg = derive2 { name="bayesreg"; version="1.0"; sha256="0crld04cxxqw0xq2d4rdv040iq7vchwjbzacj0z8jv245hwgr9qy"; depends=[BayesLogit]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayou = derive2 { name="bayou"; version="1.1.0"; sha256="1ndd7lygphngvn4a432616f6anmhxbdzmkksrhpl76xvrw5agwkc"; depends=[ape coda denstrip fitdistrplus foreach geiger MASS mnormt phytools Rcpp RcppArmadillo]; }; + bazar = derive2 { name="bazar"; version="0.1.4"; sha256="1dmxii9y61hpi7vpdm7vqdrc9lcsdazi3634k9yrdjcf6xzh4byd"; depends=[kimisc]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; bbmle = derive2 { name="bbmle"; version="1.0.18"; sha256="0gcj16msny7ni60r000mv2knb4gxbb470qn16pc6vzdhrl6c6dxj"; depends=[lattice MASS numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; - bc3net = derive2 { name="bc3net"; version="1.0.3"; sha256="0plzi5ncm3izw4k97rlyrvbnhc5zcd8mv2ldp3wy9zav0x168jda"; depends=[c3net igraph infotheo lattice Matrix]; }; - bcRep = derive2 { name="bcRep"; version="1.3.2"; sha256="0n6pcmmzrl2mv2iw2n7hc32ms6b4gwniwgpmwf4kb92bgi0yjbk4"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; + bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; + bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-1"; sha256="0gikx66lwirvh037za1ipwvw6kj7n8r31zdsbsasrvksg4r3k58m"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; + bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; }; bcp = derive2 { name="bcp"; version="4.0.0"; sha256="1bkd7812jacyk955l71b2szpc9550p0hpv3x337qgl09zck4vdgm"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; @@ -3033,144 +3722,185 @@ in with self; { bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; }; bda = derive2 { name="bda"; version="5.1.6"; sha256="0rpxvmjbqiph8hpzsvlj8q6h70jsc9771fiq7l3lmkz69jn1gf4q"; depends=[]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; - bdots = derive2 { name="bdots"; version="0.1.7"; sha256="053www3dydrzcakv6yb4ymwqhwzb88hxmgnnazzs19gpwmf7fkfm"; depends=[doParallel doRNG foreach mvtnorm nlme]; }; + bdots = derive2 { name="bdots"; version="0.1.9"; sha256="0nwcwzrh7pdxsyqnhhgd2jb9icgi7y9irlzlpz97f61mrr9n18ry"; depends=[doParallel doRNG foreach mvtnorm nlme]; }; + bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.1"; sha256="0i6wdf27243ch8pn2chqriwxjg3g72wbvzlx52mz4ahw700xjc7n"; depends=[]; }; + bdrift = derive2 { name="bdrift"; version="1.2.2"; sha256="03vwiyvxv174l0sy76gp2x8lwjf3s45zxzwrlbn97hg9c3j9adjm"; depends=[Quandl quantmod scales xts zoo]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-2"; sha256="16qhfwk0r1snm9hg32qwz7hizkpwc32m723hjm23m2026gvz2nwy"; depends=[]; }; - bdvis = derive2 { name="bdvis"; version="0.1.0"; sha256="1f837i48gmspx9xrnxzsgdbg6ykxmvkp8l20y19yd9iakhv7k3jy"; depends=[ggplot2 maps plotrix plyr sqldf taxize treemap]; }; + bdvis = derive2 { name="bdvis"; version="0.2.9"; sha256="0qgxi9i2vblc219d0gn81mkqnpn9i6c84fczc5lrbcf9a2x0q88g"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; }; bdynsys = derive2 { name="bdynsys"; version="1.3"; sha256="07gfyp0qwq9y1cnh7lhcz7q0b1s51cjwlbpll50l2cza2dszmf29"; depends=[caTools deSolve Formula Hmisc MASS matrixStats plm pracma]; }; + bea_R = derive2 { name="bea.R"; version="1.0.1"; sha256="15ihbw3chmwnlyh68dwdzzzbvzj909jz8d1m4gnmi71s4v5mc1v8"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; - bedr = derive2 { name="bedr"; version="1.0.2"; sha256="0sbhzbqmjr9x075dsv0vykfzswkqxy48baaas3n8g251lw9c5fmk"; depends=[data_table R_utils testthat VennDiagram yaml]; }; + beanz = derive2 { name="beanz"; version="1.7.1"; sha256="1x810fwciw5ca9710z8km5ccq4dspz6c7jx0kx800k7w648lnvqq"; depends=[BH Rcpp RcppEigen rstan StanHeaders survival]; }; + bedr = derive2 { name="bedr"; version="1.0.3"; sha256="1v1r5rndpd1wbwcsyzpqwag0dswicdppvs4qq28zr1acgi8cy722"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.2"; sha256="0w4szy3rgj1bdcanxbcb9agyw38jqp0hc7qsn7j9700vh20zqbln"; depends=[audio stringr]; }; - beeswarm = derive2 { name="beeswarm"; version="0.2.1"; sha256="07fiapl7pl610h3662jx22914mfvdh4rmnmmzhk2adiyyymclnn2"; depends=[]; }; + beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; + belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; benchmark = derive2 { name="benchmark"; version="0.3-6"; sha256="05rgrjhbvkdv06nzbh0v57b06vdikrqc1d29wirzficxxbjk1hih"; depends=[ggplot2 plyr proto psychotools relations reshape scales]; }; - benchmarkme = derive2 { name="benchmarkme"; version="0.2.3"; sha256="05ncmgddq83v1ndcyfa30g367a4rv1zvsxh0sn640c6qx2q1q3xy"; depends=[benchmarkmeData httr Matrix]; }; - benchmarkmeData = derive2 { name="benchmarkmeData"; version="0.2.2"; sha256="0b9m9w9948jga0cxrj9mcp6kxvgwnzr316jiyb988a901jmg04wn"; depends=[]; }; - benford_analysis = derive2 { name="benford.analysis"; version="0.1.3"; sha256="0mhi1yf3p9lffl1mcjsjxn3cay1pcjvpgg39cxr9v0nqpkyycfbh"; depends=[data_table]; }; + benchmarkme = derive2 { name="benchmarkme"; version="0.4.0"; sha256="1x17nhpxvz51mllml8mhn9lzx5in1mmfi1f6arqw2xhxd6rkbjdz"; depends=[benchmarkmeData httr Matrix]; }; + benchmarkmeData = derive2 { name="benchmarkmeData"; version="0.4.0"; sha256="06nphyma03pmjynmck9mcnws6sjp32894wv8pvh9xa14ifxqf48f"; depends=[]; }; + benchr = derive2 { name="benchr"; version="0.1.0"; sha256="1a47ambg70hl4jsr6v96z29rm3ipg1psqma792k5l2ws8422gxgw"; depends=[Rcpp]; }; + benford_analysis = derive2 { name="benford.analysis"; version="0.1.4"; sha256="0kz55548f141ic4bvg6wbb0dqrkdnggpdsalf7pra7dj8x67wbhm"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; - berryFunctions = derive2 { name="berryFunctions"; version="1.9.0"; sha256="0j3nfby1c54y3p66zwb7826z98x2b0isndabfm1ma90y9nbl2p1m"; depends=[]; }; - bestglm = derive2 { name="bestglm"; version="0.34"; sha256="0b6lj91v0vww0fy50sqdn99izkxqbhv83y3zkyrrpvdzwia4dg9w"; depends=[leaps]; }; + berryFunctions = derive2 { name="berryFunctions"; version="1.14.0"; sha256="16332811v3ivddklif5n3mwjp02c2hzysbj4vc6z6v6sxd1jvjq2"; depends=[abind]; }; + bestglm = derive2 { name="bestglm"; version="0.35"; sha256="047gb82hgivgafx5b267gpgq9y11m74rag5j05rprmv9nz43hdqj"; depends=[lattice leaps]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; - betalink = derive2 { name="betalink"; version="2.2.0"; sha256="0gqkrrak44ipnl2k4bb6a52c65csgnh4jha00yrh8cclbfsv75wf"; depends=[igraph plyr stringr]; }; - betapart = derive2 { name="betapart"; version="1.3"; sha256="0h2y2c3q6njzh2rlxh8izgkrq9y7abkbb0b13f2iyj9pnalvdv52"; depends=[ape geometry picante rcdd]; }; + betalink = derive2 { name="betalink"; version="2.2.1"; sha256="1wskr8nh1jzcrnc8fn58lscphsvj5z9p1i1pnpfdjn60mdb09rkp"; depends=[igraph plyr stringr]; }; + betapart = derive2 { name="betapart"; version="1.4-1"; sha256="1ldz6hr08vsgvz0h9ilsm5ab5fyppjpnz215lhri80x7biym3c0q"; depends=[ape geometry picante rcdd]; }; betaper = derive2 { name="betaper"; version="1.1-0"; sha256="1gr533iw71n2sq8gga9kzlah7k28cnlwxb2yh562gw6mh1axmidm"; depends=[ellipse vegan]; }; - betareg = derive2 { name="betareg"; version="3.0-5"; sha256="1zpj1x5jvkn7d8jln16vr4xziahng0f54vb4gc4vs03z7c853i4a"; depends=[flexmix Formula lmtest modeltools sandwich]; }; + betareg = derive2 { name="betareg"; version="3.1-0"; sha256="05s5lszj22186xhvk0dxgz4vqfvmss40pbh147mwqkz1h48z5pf7"; depends=[flexmix Formula lmtest modeltools sandwich]; }; betas = derive2 { name="betas"; version="0.1.1"; sha256="1v85r6lrk21viwzam42gi42bgbwh5ibn3dpbh3aqrf3dnn1rdsyd"; depends=[robust]; }; - betategarch = derive2 { name="betategarch"; version="3.2"; sha256="0x3l1zvdp8r7mam7fvdlh1w3dwpjwj86n0ysfk8g824p4mn2wsgv"; depends=[zoo]; }; + betategarch = derive2 { name="betategarch"; version="3.3"; sha256="0hqvyps3lwix2fkzk18wrkhxpqhgardvib9sq1ip8gn8sn1dsi8y"; depends=[zoo]; }; bethel = derive2 { name="bethel"; version="0.2"; sha256="1zlkw672k1c5px47bpa2vk3w2906vkhvifz20h6xm7s51gmm64i0"; depends=[]; }; + beyondWhittle = derive2 { name="beyondWhittle"; version="0.17"; sha256="1lmrsc85v3gjafk2pb013jr5v01jlf7y7csbzck48rmlgv6bqf89"; depends=[ltsa Rcpp]; }; bezier = derive2 { name="bezier"; version="1.1"; sha256="1bhqf1zbshkf1x8mgqp4mkgdxk9jxi51xj6i47kqkyn9gbdzch0c"; depends=[]; }; - bfa = derive2 { name="bfa"; version="0.3.1"; sha256="02vnbm77blllb74kll8w1i91k0llk43vq60aqjwpc5kqmzy652pk"; depends=[coda Rcpp RcppArmadillo]; }; + bfa = derive2 { name="bfa"; version="0.4"; sha256="08n6446xl2w8z0rsqi6v2hp9cp744frxw6vrbxg5cpybhyyfzr36"; depends=[coda Rcpp RcppArmadillo]; }; bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; }; bfork = derive2 { name="bfork"; version="0.1.2"; sha256="0gcmvxs57gkyvsx67dyg2jqs9wr3clndmmfqq5rvi5ys31g6krb8"; depends=[]; }; - bfp = derive2 { name="bfp"; version="0.0-30"; sha256="09im14hhykg9a3rfl4pr2af36whpxfh8dvqnsjz88jl0wzw77i3k"; depends=[Rcpp]; }; + bfp = derive2 { name="bfp"; version="0.0-31"; sha256="01b6471a0vwfickj5sl4dak1y4bqysanmzlxs867j7dcsh6nqha7"; depends=[Rcpp]; }; bgeva = derive2 { name="bgeva"; version="0.3"; sha256="0isijl43kmg4x7mdnvz0lrxr87f68dl4jx7gmlg70m8r6kk8cfqn"; depends=[magic mgcv trust]; }; bglm = derive2 { name="bglm"; version="1.0"; sha256="1ln5clsfhpzjkm6cjil0lfqg687b0xxbvw1hcvangc0c0s314mrz"; depends=[mvtnorm]; }; + bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.7"; sha256="00bjwmgqvz053yczvllf1nxy1g88fgwrrzhnw309f2yjr1qvjbgg"; depends=[car combinat lattice mvtnorm]; }; + bgsmtr = derive2 { name="bgsmtr"; version="0.1"; sha256="09h118msqf9yl2z7d6dsvgn4vrvy43ynznajj58k7gkxdlm1nimg"; depends=[coda EDISON Matrix mnormt mvtnorm sparseMVN statmod]; }; + bhm = derive2 { name="bhm"; version="1.1"; sha256="00xnqppq95qvdbiklsz4af4f0f4p61b7c7v0l1k1isxqr3mgcgia"; depends=[coda survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; + bib2df = derive2 { name="bib2df"; version="0.1.1"; sha256="0jhl1cbd04dgr9y9qw3s1wa6cnzvgid3668kv0mmn721i30hk5q3"; depends=[dplyr plyr stringr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="1.4"; sha256="14p5rss6maqy4d63w537lnslgdadvybg5vkscj38db16vqasvhcf"; depends=[dplyr factoextra FactoMineR ggplot2 igraph Matrix SnowballC stringr]; }; + bibliospec = derive2 { name="bibliospec"; version="0.0.4"; sha256="0abrbaw2knnlh8g5r4c2i6cc7a6ilfxry8zhscrx0x58irmp790b"; depends=[DBI RSQLite]; }; bibtex = derive2 { name="bibtex"; version="0.4.0"; sha256="0sy1czwjff3kdfnmlkp036qlnw8dzdl5al7izy1cc0535hsijv0d"; depends=[]; }; biclust = derive2 { name="biclust"; version="1.2.0"; sha256="03vkj7zp3dl4zbv2gzv9pahcd1018lbv4ixghvv1g0fsbndrybdg"; depends=[colorspace flexclust lattice MASS]; }; bifactorial = derive2 { name="bifactorial"; version="1.4.7"; sha256="187zlsqph7m63wf6wajvs6a4a08aax9hiqssgvma6cpkpisfiz4k"; depends=[lattice multcomp mvtnorm Rcpp]; }; + bife = derive2 { name="bife"; version="0.1"; sha256="09pv4xll609y4nfgalssyfgqd8c74zc75bbyq4d8h94yyhw1d8d0"; depends=[Formula Rcpp RcppArmadillo]; }; + bigFastlm = derive2 { name="bigFastlm"; version="0.0.1"; sha256="00i5hq3i837hj5kszm9rqax86g273aklxwikrabzwnyai9ziz8qa"; depends=[BH bigmemory Rcpp RcppEigen]; }; bigGP = derive2 { name="bigGP"; version="0.1-6"; sha256="0fwm06rzx1qbh16ii93x26i4v4yb50jk67k3qmzyr3gr4z9b9xhg"; depends=[Rmpi]; }; + bigQueryR = derive2 { name="bigQueryR"; version="0.2.0"; sha256="1z9a725jd9nparid0df7fyvsa5mvz92krj0q7mq75x6cprr44f29"; depends=[googleAuthR googleCloudStorageR]; }; bigRR = derive2 { name="bigRR"; version="1.3-10"; sha256="08m77r9br6wb9i21smaj4pwwpq3nxdirs542gnkrpakl7bvyp6s3"; depends=[DatABEL hglm]; }; + bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; bigalgebra = derive2 { name="bigalgebra"; version="0.8.4"; sha256="19rv552ac0q9djc1yvpldkc0lipdf6q143m9dnndpsqs7ayqlr4g"; depends=[BH bigmemory]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; bigdata = derive2 { name="bigdata"; version="0.1"; sha256="1n1zcjhvb2s87d7fkcm95x11ss4b8pczza0n55gxjv4przfiq0in"; depends=[glmnet lattice Matrix]; }; biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; }; - biglasso = derive2 { name="biglasso"; version="1.0-1"; sha256="09yahcklcnrf03rsr2j01gh4n3mlnzjsvv13nlhg48r88r6wizmy"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; + biglasso = derive2 { name="biglasso"; version="1.3-3"; sha256="1mv9zildvkq8a5rvhr8hr1d7v3zn58j5bjc17wz75mqk0dsfwdjs"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; biglm = derive2 { name="biglm"; version="0.9-1"; sha256="1z7h4by457z93k5i6qf5rq7xmd1y2kcd1rq4pv465cd32d4mb2g1"; depends=[DBI]; }; - bigmemory = derive2 { name="bigmemory"; version="4.5.18"; sha256="1yl4izrq00pcsnzji4qx2yfrfk15iwf0v4r8rdm62lbaj0vx3haf"; depends=[BH bigmemory_sri Rcpp]; }; + bigmemory = derive2 { name="bigmemory"; version="4.5.19"; sha256="191gbzca557kpk7mdsg716vfyqpr7j5din6qb8hin4g1nkzzwmg6"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; bigpca = derive2 { name="bigpca"; version="1.0.3"; sha256="0hqkaamj5fyp2jw5727pkvmnqr194ngh4hlja14qmj81nr26a88p"; depends=[biganalytics bigmemory bigmemory_sri irlba NCmisc reader]; }; - bigrquery = derive2 { name="bigrquery"; version="0.2.0"; sha256="15hwi4n574j03nh2brr6qyfigkg25mj4pq4fm0igyg45cm3ixdw8"; depends=[assertthat dplyr httr jsonlite R6]; }; - bigsplines = derive2 { name="bigsplines"; version="1.0-8"; sha256="00w8jv5nlkm12djry69w11dzpg85x4ygriq9g9d3x0saisii5x12"; depends=[]; }; + bigrquery = derive2 { name="bigrquery"; version="0.3.0"; sha256="0g13fqs0x5v7nzqd0iyajw4dw9arykm3zn0wvnk0lb7c9izkk9lr"; depends=[assertthat DBI dplyr httr jsonlite R6]; }; + bigsplines = derive2 { name="bigsplines"; version="1.1-0"; sha256="0jjlv9qidn8xrz630wbyq7kz7vlxgaphv2y2siv90j01j5nj4s89"; depends=[quadprog]; }; + bigstep = derive2 { name="bigstep"; version="0.7.1"; sha256="1x8bx0n9nplb6h54nf1s18qv2zgy79ykass08qin6l1d65qvpfwc"; depends=[bigmemory R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; + bigtcr = derive2 { name="bigtcr"; version="1.0"; sha256="1wh85r6f4jd8xzinczr5g1p1acbcyn4am3v1n4blfbn447l9nx4z"; depends=[]; }; + bikeshare14 = derive2 { name="bikeshare14"; version="0.1.0"; sha256="12399c01s8p9rmpi3fpy4rm7xxnsf627slz3h234frbahhs882c4"; depends=[]; }; bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; binGroup = derive2 { name="binGroup"; version="1.1-0"; sha256="1sf7prg2x1ryynf1kz7jr50svmga7kjgd5pi9qm3g2hyimz8mvs4"; depends=[]; }; binMto = derive2 { name="binMto"; version="0.0-6"; sha256="1h9s42wk848x15f4glhsh2iikpra64miwlia6xz5dqlzbs4vw86k"; depends=[mvtnorm]; }; - binaryLogic = derive2 { name="binaryLogic"; version="0.3.2"; sha256="04ghil0h560zm2q4rndyxsxgp9jzh6xx3apx2m8y84p4c9h2q695"; depends=[]; }; + binaryLogic = derive2 { name="binaryLogic"; version="0.3.5"; sha256="1zaqwkrr1dyxsbfa3zvz1ciipmqddl932jkw9r00qmnhdh3ybpa6"; depends=[]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; - binequality = derive2 { name="binequality"; version="0.6.1"; sha256="18pcz5b65zk6fwh597pcbpyy0j7gkxp5swwadxvsa3cainvyd07n"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; + bindr = derive2 { name="bindr"; version="0.1"; sha256="0d95ifm0x4mrfzi20xf39f5pzd7rfzqsld0vjqf6xzga5rhnd8fc"; depends=[]; }; + bindrcpp = derive2 { name="bindrcpp"; version="0.1"; sha256="0djmmvkkf9z291r1h41g542v81qccqqh50xdn5y7za1kaxmh9pj1"; depends=[bindr plogr Rcpp]; }; + binequality = derive2 { name="binequality"; version="1.0.1"; sha256="0an73s9nj96hm83va4p5zfv2sv8vnp1fwjwx4ls5carg8f5pmfv5"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; + binford = derive2 { name="binford"; version="0.1.0"; sha256="04mpdvynlm4gddybys04k0446gc9hyq0vaxr6a525p76ls5aw4b1"; depends=[]; }; bingat = derive2 { name="bingat"; version="1.2.2"; sha256="1vx6zm6vvv7nzp781fa6mb2iq6hmndi5f3yml15ydw4cx3f8r0xd"; depends=[doParallel foreach genalg gplots matrixStats network]; }; binhf = derive2 { name="binhf"; version="1.0-1"; sha256="0l8925bj6mjv2y7fn76zh2g8xjig3kbbdy4jl0ip3gd9kbrakl9k"; depends=[adlift wavethresh]; }; + binman = derive2 { name="binman"; version="0.1.0"; sha256="103f74gm124vw4rwbfrd5dlgca3v83kqd8m5j9z3ma3snh788mkx"; depends=[assertthat httr jsonlite rappdirs semver xml2 yaml]; }; binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; }; - binomSamSize = derive2 { name="binomSamSize"; version="0.1-3"; sha256="0hryaf0y3yjxp84c0k80mhxj8zzlad697bv2yrvcjvllkzdvzbm7"; depends=[binom]; }; + binomSamSize = derive2 { name="binomSamSize"; version="0.1-4"; sha256="0m7g4fagw44l23ancisnp41928pwkr0cwyi1015nbccqbgrw2g3n"; depends=[binom]; }; binomTools = derive2 { name="binomTools"; version="1.0-1"; sha256="14594i7iapd6hy4j36yb88xmrbmczg8zgbs0b6k0adnmqf83bn4v"; depends=[]; }; binomen = derive2 { name="binomen"; version="0.1.0"; sha256="0r89xcbp0jjirr36j3i4xmdjn2wh142c0jv1whzpzjdmcsh806g6"; depends=[dplyr jsonlite lazyeval]; }; binomialcftp = derive2 { name="binomialcftp"; version="1.0"; sha256="00c7ymlxk1xnx3x1814x7bcyir7q5sy4rb82dcpzf2bdly4xa1qr"; depends=[]; }; binomlogit = derive2 { name="binomlogit"; version="1.2"; sha256="1njz1g9sciwa8q6h0zd8iw45vg3i1fwcvicj5y8srpk8wqw3qp7k"; depends=[]; }; binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; }; - binseqtest = derive2 { name="binseqtest"; version="1.0.1"; sha256="0snlrwmmmwrl3fj8652rllgays737m020qc3fqv4sfp1vn6aayng"; depends=[clinfun]; }; + binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; }; + binsmooth = derive2 { name="binsmooth"; version="0.1.0"; sha256="1zlw4zmkckg7rwf4hx8wyr2yl644xkdkazayysy99saysr9pk2c9"; depends=[ineq pracma triangle]; }; + binst = derive2 { name="binst"; version="0.2.0"; sha256="13hg9kmxlaczbkbimlqphpimzx67kncc6qvnlk9cxqyvfkb0ph47"; depends=[]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; }; - bio3d = derive2 { name="bio3d"; version="2.2-4"; sha256="0kzbg4rzpbs3qicbg9cfqggm9fzy81waw6b0n1kn2yc9azlqwgvz"; depends=[]; }; + bio3d = derive2 { name="bio3d"; version="2.3-1"; sha256="0dm582jam4ll5q82vfxf1gjrmv1qzl60kws6vmxjx91d5jwf1fqy"; depends=[Rcpp]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; - biogas = derive2 { name="biogas"; version="1.2.1"; sha256="0prp9s60d133s94n78m2rvlaph98j1xpsw2ykwkp33mq4sgjqbkq"; depends=[]; }; - biogram = derive2 { name="biogram"; version="1.2"; sha256="1kklidp1nm9jb0nvlhlhxklh4fp86plfsslp4ajnv8i4rc6h0v19"; depends=[bit entropy slam]; }; - bioinactivation = derive2 { name="bioinactivation"; version="1.1.2"; sha256="1hcn29nvq9sf3ayc5nlyxiihqacccbqikcxlypxxq5x7kv20ml9a"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS]; }; - biom = derive2 { name="biom"; version="0.3.12"; sha256="18fmzp2zqjk7wm39yjlln7mpw5vw01m5kmivjb26sd6725w7zlaa"; depends=[Matrix plyr RJSONIO]; }; - biomartr = derive2 { name="biomartr"; version="0.0.3"; sha256="15ds9518kanr7ifc6xnswmj28asmqh7qm2nz8ll6ak1c97gwllmg"; depends=[biomaRt Biostrings data_table downloader dplyr httr RCurl readr stringr XML]; }; + biogas = derive2 { name="biogas"; version="1.6.0"; sha256="100593ddrsl82hhpq289vs0gdasrm9fmwf6vhd530rp8k7y07j4a"; depends=[]; }; + biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; + biogram = derive2 { name="biogram"; version="1.4"; sha256="1kkim6dxmvvpby2ir280adl14jmrz7nsib3m8g2ki81d539km6il"; depends=[bit combinat entropy partitions slam]; }; + bioimagetools = derive2 { name="bioimagetools"; version="1.1.0"; sha256="0ws99rx7bhqi448qqy08jsl3c4vbq96gigqb85yv1mzrc82sg62p"; depends=[EBImage httr tiff]; }; + bioinactivation = derive2 { name="bioinactivation"; version="1.1.5"; sha256="0m20947n2kzrfy8a592k1d9fg1xlv83vjf11pp4h5hhxd8fbm0w5"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS]; }; + biomartr = derive2 { name="biomartr"; version="0.3.0"; sha256="15r0dx0pbb2fxgc1ai2f9rg4dd3vly1yxkh4vv698gkf1z0r6cxx"; depends=[biomaRt Biostrings data_table downloader dplyr httr jsonlite RCurl readr stringi stringr tibble XML]; }; biomod2 = derive2 { name="biomod2"; version="3.3-7"; sha256="0mbf6j4m7vvq82l1grmznfqirj1ynr6jzzlpx0s2wjd3hdbvgzia"; depends=[abind dismo earth gbm ggplot2 MASS maxent mda nnet PresenceAbsence pROC randomForest raster rasterVis reshape rpart sp]; }; bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; }; - biorxivr = derive2 { name="biorxivr"; version="0.1.2"; sha256="1715i1wp9ja7ipw3awh9mw5whdnwjygf2m73z4pr2f57wyb11n7f"; depends=[XML]; }; + bioplots = derive2 { name="bioplots"; version="0.0.1"; sha256="184wp1jvgf7a80srrfq72a4r1la2psr8b16kxs00v2gcbgjyvr10"; depends=[ggplot2 gplots RColorBrewer reshape2]; }; + biorxivr = derive2 { name="biorxivr"; version="0.1.3"; sha256="1vi035c4jld5i52xnp79dn5642308cv11vfrw0n62wlsbjfbdma4"; depends=[XML]; }; bios2mds = derive2 { name="bios2mds"; version="1.2.2"; sha256="1avzkbk91b7ifjba5zby5r2yw5mibf2wv05a4nj27gwxfwrr21cd"; depends=[amap cluster e1071 rgl scales]; }; biosignalEMG = derive2 { name="biosignalEMG"; version="2.0.0"; sha256="0avn35r567crp3z4i1fvlfirvc085cf3g6znc6wgnm7mhxp3l1ss"; depends=[signal]; }; + biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; biotools = derive2 { name="biotools"; version="3.0"; sha256="0k5dgaw2ris9vp370d8qhpnvnd0hllac8cv5sp52vgqskwygg7fx"; depends=[boot lattice MASS rpanel SpatialEpi tkrplot]; }; - bipartite = derive2 { name="bipartite"; version="2.05"; sha256="05w3ypdxy2lfygdlvg9xv88dpsf21i60rsbvvz058zwpfzr39hfh"; depends=[fields igraph MASS permute sna vegan]; }; + bipartite = derive2 { name="bipartite"; version="2.07"; sha256="10gpmcnlnhv55ffff23xsmwbq58r2wvg54wyv1isa0jp4vh0b67x"; depends=[fields igraph MASS permute sna vegan]; }; biplotbootGUI = derive2 { name="biplotbootGUI"; version="1.1"; sha256="0k92z9iavvq5v56x2hgkmrf339xl7ns1pvpqb4ban8r1j8glzawi"; depends=[cluster dendroextras MASS rgl shapes tcltk2 tkrplot]; }; + birdnik = derive2 { name="birdnik"; version="0.1.0"; sha256="1ql29qbv7jw6cngd36qcgljx0zvvzp2v5rjd44v0j04gww1kb2bc"; depends=[httr]; }; birdring = derive2 { name="birdring"; version="1.3"; sha256="1vlivapmgq3kz2zz795c7hcfpibnqcfnxp7m42di37yngqc90q87"; depends=[geosphere ks lazyData raster rgdal rgeos rworldmap rworldxtra sp]; }; - birk = derive2 { name="birk"; version="2.1.0"; sha256="00hzhv209wzgmngaq699f1sr003vwsk9s42s8pkli4qjlwzwqk12"; depends=[]; }; + birk = derive2 { name="birk"; version="2.1.2"; sha256="07ck59m5mw897a60vmdn1b3qrmqj20qpfsn3093haqbpn8z13dmn"; depends=[]; }; bisectr = derive2 { name="bisectr"; version="0.1.0"; sha256="1vjsjshvzj66qqzg32rviklqswrb00jyq6vwrywg1hpqhf4kisv7"; depends=[devtools]; }; bisoreg = derive2 { name="bisoreg"; version="1.4"; sha256="1ianhk5vrzhwb9ymzvlx9701p5c4iasxyq7nhrvm815dm15rf2wf"; depends=[bootstrap coda monreg R2WinBUGS]; }; bit = derive2 { name="bit"; version="1.1-12"; sha256="0a6ig6nnjzq80r2ll4hc74za3xwzbzig6wlyb4dby0knzf3iqa6f"; depends=[]; }; bit64 = derive2 { name="bit64"; version="0.9-5"; sha256="0fz5m3fhvxgwjl76maag7yn0zdw24rx34gy6v77378fajag9yllg"; depends=[bit]; }; bitops = derive2 { name="bitops"; version="1.0-6"; sha256="176nr5wpnkavn5z0yy9f7d47l37ndnn2w3gv854xav8nnybi6wwv"; depends=[]; }; + bitrugs = derive2 { name="bitrugs"; version="0.1"; sha256="0sqgp05b902mdldr4ckz4knmkbsqvgl1vx0l792cn2r437yqlgp3"; depends=[]; }; bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; - biwavelet = derive2 { name="biwavelet"; version="0.17.10"; sha256="0rvlpqfrgajaw5bifc3103ixj2akdhpcxqhgw9fv0r1c5kv98qz0"; depends=[fields]; }; + bivrp = derive2 { name="bivrp"; version="1.0"; sha256="0q00k24fssvjkgpndg84vdm7w9hswq593k6yjha4pl0a8bmnv6f8"; depends=[MASS]; }; + biwavelet = derive2 { name="biwavelet"; version="0.20.11"; sha256="0fmk4b8gzbq0l4n08zq4pl1csaxxxi3hpqd886ccbhmg6zn8dz01"; depends=[fields foreach Rcpp]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; - bizdays = derive2 { name="bizdays"; version="0.2.2"; sha256="1n2bh7vy0fhxq20s4lnbhgig1012di34kfl61i0ap7pc6464kg8d"; depends=[]; }; - blavaan = derive2 { name="blavaan"; version="0.1-2"; sha256="0g04554s11v2nybawvv635dgf3dajh12h2hlxlccjz5rslg27hb8"; depends=[lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; }; + bizdays = derive2 { name="bizdays"; version="1.0.1"; sha256="1nig6nfxw7vrvq20p49l2b5z8cnjihljivir3lgj99djb5w8i6lk"; depends=[]; }; + bkmr = derive2 { name="bkmr"; version="0.1.0"; sha256="0pw82sd8x82nk5c5c6lr7yqr767nrkgk1rvbpwy5vwdpvwwj5ibl"; depends=[dplyr fields magrittr MASS nlme tidyr truncnorm]; }; + blackbox = derive2 { name="blackbox"; version="1.0.18"; sha256="1sgq6i8p066li9lr3241zplygv7yc7mp7k13c6nih0289v3l7jg7"; depends=[geometry lattice MASS nloptr numDeriv proxy rcdd Rcpp RcppEigen spaMM]; }; + blavaan = derive2 { name="blavaan"; version="0.2-2"; sha256="1jiicy21zhrnk04b74nxs4yp3g0mzcxxb6zn5wks12b1791ykrm6"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; }; + blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blighty = derive2 { name="blighty"; version="3.1-4"; sha256="1fkz3vfcnciy6rfybddcp5j744dcsdpmf7cln2jky0krag8pjzpn"; depends=[]; }; + blkbox = derive2 { name="blkbox"; version="1.0"; sha256="14bl0b5w46gb7v8p94df5r56nj849r7jqisajagvd1irda3vkc7z"; depends=[bartMachine caret dplyr e1071 ggplot2 glmnet gtools kknn knitr magrittr nnet pamr party plyr pROC randomForest reshape reshape2 rJava rmarkdown shiny shinyjs stringr tibble tidyr xgboost]; }; blkergm = derive2 { name="blkergm"; version="1.1"; sha256="0giknhcl14b4djn5k5v5n33b7bc3f8x6lx2h4jr25kpd89aynhq5"; depends=[ergm network statnet_common]; }; blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; blme = derive2 { name="blme"; version="1.0-4"; sha256="1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.1"; sha256="1hzg5dimzj1khygm9dv0y30mx1nf9vdhgicqdg1rvj7nf426h2ki"; depends=[arm lme4 MASS MuMIn]; }; - blockTools = derive2 { name="blockTools"; version="0.6-2"; sha256="0h04179ybklwbs69rg73p5h09fi3vzagh845r00ivw4iv18anq40"; depends=[MASS]; }; - blockcluster = derive2 { name="blockcluster"; version="4.0.2"; sha256="0pvsi56v2dm9mz9a2h401z5h07ln5hfrgch2r6jmgnyg26kxa72r"; depends=[Rcpp rtkore]; }; + blob = derive2 { name="blob"; version="1.0.0"; sha256="0zjb3sbx4q36d69p2164im1nvpsdjz5mqa5rmncjziipgz6aix38"; depends=[tibble]; }; + blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; + blockcluster = derive2 { name="blockcluster"; version="4.2.1"; sha256="05fy6l0q0q0jmvyfph3wmlkniz4njkrzmhyy14hamzsiwn23cpiw"; depends=[Rcpp rtkore]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; blockmodeling = derive2 { name="blockmodeling"; version="0.1.8"; sha256="0x71w1kysj9x6v6vsirq0nndsf6f3wzkf8pbsq3x68sf4cdji1xl"; depends=[]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="2.0"; sha256="0d99dp7wci89gc2iacq830ibvfx0qa90ds9l7h2zwr4knam4brzz"; depends=[crossdes]; }; + blocksdesign = derive2 { name="blocksdesign"; version="2.4"; sha256="0nwcayxrp829599hlz860xkrm49ij1l6anxrf4gsvfgs4rlm380j"; depends=[crossdes]; }; blockseg = derive2 { name="blockseg"; version="0.2"; sha256="183hjb66589qqjwf14rzdmy770biad73r0l5pkh6f4xk9xac1r62"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; - blsAPI = derive2 { name="blsAPI"; version="0.1.3"; sha256="10jkfrl4xa3vzvh5rk3jdn5ix3hhqgbdg6h0wcijmgqhj8v9gj0j"; depends=[RCurl rjson]; }; + blsAPI = derive2 { name="blsAPI"; version="0.1.7"; sha256="0q04vsmhxz5galdjcqrbabghfn747pi6zdpchj3xavcf6wx8xs5s"; depends=[RCurl rjson]; }; + blscrapeR = derive2 { name="blscrapeR"; version="2.1.2"; sha256="0qyj1fnhb5cb425y3ws1rwpv6sm2bqx9j3gyk3l8m2yn5z6qmjns"; depends=[ggplot2 httr jsonlite magrittr]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; bmem = derive2 { name="bmem"; version="1.5"; sha256="1miiki743rraralk9dp12dsjjajj3iizcrfwmplf6xas6pl8sfk6"; depends=[Amelia lavaan MASS sem snowfall]; }; bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; + bmixture = derive2 { name="bmixture"; version="0.3"; sha256="1q22wdg3909krdqg0vgkny9lq9l7j0cs99ay68aggqjd9kcgrl4g"; depends=[]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; + bmlm = derive2 { name="bmlm"; version="1.2.10"; sha256="1kng958v08vv54y3wbvf65rlpq6iwwfnr2gj0j3n05nq3c3qdm9n"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; }; bmp = derive2 { name="bmp"; version="0.2"; sha256="059ps1sy02b22xs138ba99fkxq92vzgfbyf2z5pyxwzszahgy869"; depends=[]; }; bmrm = derive2 { name="bmrm"; version="3.0"; sha256="0ix5hfsvs2vnca0l1aflynddw6z85cqdyxn0y7xynkkapk182g4p"; depends=[LowRankQP lpSolve]; }; - bnclassify = derive2 { name="bnclassify"; version="0.3.2"; sha256="0nbbna2qr57xvc7paqxaahff0r6gk92hz3gyk8v5kdb3hpcw8ph6"; depends=[assertthat entropy graph matrixStats RBGL rpart]; }; - bnlearn = derive2 { name="bnlearn"; version="3.9"; sha256="19c3qda4lkzasgrjra0y3w8bg3jf9cp4lgaal7p43nlfani8y2xw"; depends=[]; }; + bnlearn = derive2 { name="bnlearn"; version="4.1"; sha256="0ywj94m9jvwci3q1abld2yfpz0h48x4lbfqyqyg43pbzs3p7p6r0"; depends=[]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.4"; sha256="0rbv8vq7wlzc1mmjqaw9yxjfdgb0cwiwvhwlay24njq16fhidk9w"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; bnpmr = derive2 { name="bnpmr"; version="1.1"; sha256="0hvwkdbs2p2l0iw0425nca614qy3gsqfq4mifipy98yxxvgh8qgc"; depends=[]; }; - bnstruct = derive2 { name="bnstruct"; version="1.0"; sha256="1bc4q5gk56xmmsiglg8434hpl3lvbyg9hgv5xx5b8law6hn5znz4"; depends=[bitops igraph Matrix]; }; - boa = derive2 { name="boa"; version="1.1.8-1"; sha256="15nkr24hgv1286h9b6sdhlpljnm98fi5mmpsygl76h24dayy3854"; depends=[]; }; + bnspatial = derive2 { name="bnspatial"; version="1.0.1"; sha256="0cm4kqidjlb64rnjmiwsbjay8fjzwbmpm8k1bl1kz6nj4y532v6d"; depends=[doParallel foreach gRain gRbase raster]; }; + bnstruct = derive2 { name="bnstruct"; version="1.0.2"; sha256="0n4gn1vhka694wdzignawyaca0rx2l0wjgw09fw42bkrswfjvxy1"; depends=[bitops igraph Matrix]; }; + boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; }; bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; }; boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; - bold = derive2 { name="bold"; version="0.3.0"; sha256="11b5zqyhvg3cc47mk8r7h219abj12paxcdb23gxqgkyrhlykkbks"; depends=[assertthat httr jsonlite plyr reshape stringr XML]; }; + bold = derive2 { name="bold"; version="0.4.0"; sha256="09ib3h9a3cjcysf5503qh1vrxd79dycsd0rg0xkikrxljzmfmv4b"; depends=[assertthat data_table httr jsonlite plyr reshape stringr tibble xml2]; }; + bookdown = derive2 { name="bookdown"; version="0.3"; sha256="0r9bchzg7im6psc3jphvshzbidc5bv5xaih1qg7b5518jy4iyvb9"; depends=[htmltools knitr rmarkdown yaml]; }; boolean3 = derive2 { name="boolean3"; version="3.1.6"; sha256="00s6ljhqy8gpwa3kxfnm500r528iml53q364bjcl4dli2x85wa9p"; depends=[lattice mvtnorm numDeriv optimx rgenoud rlecuyer]; }; boostSeq = derive2 { name="boostSeq"; version="1.0"; sha256="0sikyzhn1i6f6n7jnk1kb82j0x72rj8g5cimp2qx3fxz33i0asx6"; depends=[genetics lpSolveAPI]; }; - boostmtree = derive2 { name="boostmtree"; version="1.0.0"; sha256="1fkr7r1y7hsd1iv2qshy13p2kqy9hl08q66vfb96ma3ipf7cnw1n"; depends=[nlme randomForestSRC]; }; + boostmtree = derive2 { name="boostmtree"; version="1.1.0"; sha256="1k6cwiz6354xgmqyadm4vfrl4szcr2c9mgxgmmngdc28p7sm50i7"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-18"; sha256="0pi348vvgzn1ny54yxhw6kq6nl7rx9bpr9ji1a6wqs8ah5zj7z8j"; depends=[]; }; bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; @@ -3178,107 +3908,137 @@ in with self; { bootRes = derive2 { name="bootRes"; version="1.2.3"; sha256="0bb7w6wyp9wjrrdcyd3wh44f5sgdj07p5sz5anhdnm97rn1ib6dz"; depends=[]; }; bootSVD = derive2 { name="bootSVD"; version="0.5"; sha256="14xwbrpqj3j1xpsppgjxpn9ggsns2n1kmni9vn30vgy68zwvs2wy"; depends=[ff]; }; bootStepAIC = derive2 { name="bootStepAIC"; version="1.2-0"; sha256="0p6v4zjsaj1p6c678010fazdh40lpv0rvhczd1halj8aic98avdx"; depends=[MASS]; }; - bootnet = derive2 { name="bootnet"; version="0.2"; sha256="1ij4hjgp4nnc6x0l38xvkv5i06r7rdddrfjhjsaipkdkrxdjki9z"; depends=[abind corpcor dplyr ggplot2 gtools IsingFit IsingSampler Matrix mvtnorm qgraph]; }; - bootruin = derive2 { name="bootruin"; version="1.2-1"; sha256="1ii1fcj8sn9x82w23yfzxkgngrgsncnyrik4gcqn6kv7sl58f4r3"; depends=[]; }; + bootTimeInference = derive2 { name="bootTimeInference"; version="0.1.0"; sha256="0kpb0xnvyjf3z2zy1970zzmiiln232m8xykz9qylpmln91z6xnjm"; depends=[Rcpp RcppArmadillo]; }; + bootnet = derive2 { name="bootnet"; version="0.4"; sha256="1xc7ajvbsic4c881pn4k9xrbvijpjig9x8ij284ljvfbwd6ymgfd"; depends=[abind corpcor dplyr ggplot2 gtools huge IsingFit IsingSampler Matrix mgm mvtnorm parcor qgraph]; }; + bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; bootsPLS = derive2 { name="bootsPLS"; version="1.0.3"; sha256="0jkpci97chbvlfkcbbj3gm2dnj5aiwfrh739kd4fa0zra4ac1adh"; depends=[mixOmics]; }; bootspecdens = derive2 { name="bootspecdens"; version="3.0"; sha256="0hnxhfsc3ac4153lrjlxan8xi4sg1glwb5947ps6pkkyhixm0kc1"; depends=[MASS]; }; bootstrap = derive2 { name="bootstrap"; version="2015.2"; sha256="1h068az4sz49ysb0wcas1hfj7jkn13zdmk087scqj5iyqzr459xf"; depends=[]; }; boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; - boral = derive2 { name="boral"; version="0.9.1"; sha256="1ls6is60d7h4zg5dhbgksjznfsffgim2pn6zgcvln7l6zl5di52s"; depends=[coda fishMod MASS mvtnorm R2jags]; }; + boral = derive2 { name="boral"; version="1.2"; sha256="1xd9g3ll6ax363ip0wh5zpk8yw23pcv4wxlm2xxshmxyx0k9gqfk"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; + bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; + boxoffice = derive2 { name="boxoffice"; version="0.1.1"; sha256="19l65nxrj0q7vr5ds6cwf7ynaqzd3ivzx673svvl6wmxlgn67cfi"; depends=[foreach lubridate rvest xml2]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.2.2"; sha256="01bvp6vjnlhc4lndxwd705bzlsh7zq0i9v66mxszrcz6v8hb9rwi"; depends=[]; }; - boxr = derive2 { name="boxr"; version="0.3.2"; sha256="0inwyvnx1846ng6b72y52ndx601ic4iw23ha499rj6ivrjm726ki"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; + boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; + bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; bpca = derive2 { name="bpca"; version="1.2-2"; sha256="05ldz6b2s379mymj8jzvia9x6gj047gwsxvnv3zj9x8b1hvndnd6"; depends=[rgl scatterplot3d]; }; - bpcp = derive2 { name="bpcp"; version="1.3.1"; sha256="136wwxgs0cq1wk48r3xvh7ga2w5qmswbnxw9vg756imdzm1w6lnr"; depends=[]; }; + bpcp = derive2 { name="bpcp"; version="1.3.4"; sha256="0l4x3n7lcwinnrh2sy386grisj1x7k1d5hll1k4bljg01p7lb475"; depends=[]; }; bpkde = derive2 { name="bpkde"; version="1.0-7"; sha256="1ls6rwmbgb2vzsjn34r87ab8rnz3ls61g6f4x3jpglbk0j91f0h8"; depends=[]; }; + bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; }; bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; + braQCA = derive2 { name="braQCA"; version="0.9.9.6"; sha256="1xqy0vykxdp0kr87w1sq8yjqrj0y8xh64fr2y8l79763xkyxpn0y"; depends=[bootstrap dplyr QCA QCAGUI]; }; + braidReports = derive2 { name="braidReports"; version="0.5.3"; sha256="107c9lrzb55dw5pal8qqpn8is3nrh19vfngx3zcfpmc49f06kskq"; depends=[braidrm ggplot2]; }; braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; }; - brainGraph = derive2 { name="brainGraph"; version="0.55.0"; sha256="11swjhpnnb6a2bq0xa0ai9jgzv0c481hc92rq1vpg1wzrlzz12rc"; depends=[abind ade4 boot cairoDevice data_table foreach ggplot2 Hmisc igraph oro_nifti plyr RGtk2 scales]; }; + brainGraph = derive2 { name="brainGraph"; version="0.72.0"; sha256="1r52zyvyxd7qj46ffpvv5vjjmkk8zanvq3w1mdww1fsim94i1507"; depends=[abind ade4 boot cairoDevice data_table foreach ggplot2 Hmisc igraph oro_nifti permute plyr RcppEigen RGtk2 scales]; }; brainR = derive2 { name="brainR"; version="1.2"; sha256="1515v6kk73p4s3vrnkpkilfxfyqrf7b762sq6j364ygsyfybvh2z"; depends=[misc3d oro_nifti rgl]; }; brainwaver = derive2 { name="brainwaver"; version="1.6"; sha256="0r79dpd9bbbn34rm29512srzj3m29qgvbryvrp1mwv8mmcsh6ij6"; depends=[waveslim]; }; + brea = derive2 { name="brea"; version="0.1.0"; sha256="0jawpl4d7himydb9z4kqpa7s6b7ghw9yp5j6xvzilbka0agpazck"; depends=[]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; - breakaway = derive2 { name="breakaway"; version="2.0"; sha256="0x4hrvx6nd0k2gv7xvi9z8pl3cr94glm9s6fcna7ml8ag19dqwny"; depends=[]; }; + breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; }; breakpoint = derive2 { name="breakpoint"; version="1.2"; sha256="004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9"; depends=[doParallel foreach ggplot2 MASS msm]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brewdata = derive2 { name="brewdata"; version="0.4"; sha256="1i8i3yhyph212m6jjsij61hz65a5rplxw8y2xqf6daqiisam5q6i"; depends=[RCurl stringdist XML]; }; brglm = derive2 { name="brglm"; version="0.5-9"; sha256="14hxjamxyd0npak8wyfmmb17qclj5f86wz2y9qq3gbyi2s1bqw2v"; depends=[profileModel]; }; bride = derive2 { name="bride"; version="1.3"; sha256="03k9jwklg1l8sqyjfh914570880ii0qb5dd9l0bg0d0qrghbj0rk"; depends=[]; }; - brms = derive2 { name="brms"; version="0.8.0"; sha256="04dvfvpq0pb30gpiz9mzr799sd2irlqv1v9f7fjmfj19gildyhj9"; depends=[abind coda ggplot2 gridExtra lme4 loo Matrix rstan shinystan statmod]; }; + bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; + bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; + briskaR = derive2 { name="briskaR"; version="0.1.0"; sha256="0fx254pc250jv53kmd6miw8blcp43c72myah9g5ns2s84pcdmx6h"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; + brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; }; + brms = derive2 { name="brms"; version="1.5.0"; sha256="1rjrf88wfbq1zzyxkrrajis6mrsv3zi4kdf7y8992bwfx53pwpph"; depends=[abind bayesplot coda evd ggplot2 loo Matrix matrixStats mgcv nlme Rcpp rstan rstantools RWiener shinystan statmod]; }; brnn = derive2 { name="brnn"; version="0.6"; sha256="0q3f3cbl89hgpav7bn54s13cysgz8fi0zm8byc9rgz0sqkjrxval"; depends=[Formula]; }; - broman = derive2 { name="broman"; version="0.62-1"; sha256="1hcwrzagm78gkllfz6jplwzirr082prsiykydfc90ai9m0in3wjk"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.4.0"; sha256="0k9sbb4c4ncgnrsdr9bcl8nr57xdygjhh19mm8c7ymnsr56xcvxp"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; - brotli = derive2 { name="brotli"; version="0.6"; sha256="01v2y8mwzcw7sfaqbq26528fpwmpprbd7lnn3prs5rwm3d9mafaa"; depends=[]; }; + broman = derive2 { name="broman"; version="0.65-1"; sha256="1zfcrkky4a71zq4mgnc0xcy0m8c9srwq850s97qry9a69f6j5c42"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; + broom = derive2 { name="broom"; version="0.4.2"; sha256="0i2s3jbi0v5xhbqkmms4f17i3x9s6lan4bj521qmxwiwc89r8h4z"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; + brotli = derive2 { name="brotli"; version="0.8"; sha256="1cdc1ghvwdr64spns7x96gml9vqjd33xhk76w04nk0ldb3in4jfp"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; - brranching = derive2 { name="brranching"; version="0.1.0"; sha256="17n11i2wq16jzs1lk3wwyzfgacbm692g99vlakdqnr2a1c1vpfah"; depends=[ape httr taxize]; }; + brranching = derive2 { name="brranching"; version="0.2.0"; sha256="0y99px2m02rl60qgf6pjbjv6isp8v1w9sny6p2icgsx4bwxjxmns"; depends=[ape curl httr phytools taxize]; }; + bsam = derive2 { name="bsam"; version="1.1.1"; sha256="00ckj2pmyh7pqmbvwlgvgc3m53c807mri46jc0ivfwgf0kc8q0s0"; depends=[coda dplyr ggplot2 gridExtra msm mvtnorm rjags rworldxtra sp tibble]; }; + bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bshazard = derive2 { name="bshazard"; version="1.0"; sha256="151c63pyapddc4z77bgkhmd7rsa1jl47x8s2n2s8yc6alwmj6dvs"; depends=[Epi survival]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; + bsplus = derive2 { name="bsplus"; version="0.1.0"; sha256="1hpjrmsn66brf1hpwfmg55jbpwbhvkz7sbr160z1cgq3hdhqm7r8"; depends=[htmltools lubridate magrittr purrr rmarkdown stringr]; }; bspmma = derive2 { name="bspmma"; version="0.1-1"; sha256="0bd6221rrbxjvabf1lqr9nl9s0qwav47gc56sxdw32pd99j9x5a9"; depends=[]; }; bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; }; - bst = derive2 { name="bst"; version="0.3-13"; sha256="1jpjwmwchhlqx2li26xh0n88647nnjz58vmjxsq0kp7jaigy0xbn"; depends=[doParallel foreach gbm rpart]; }; - bsts = derive2 { name="bsts"; version="0.6.3"; sha256="1psr14nv20h1hzki32wsgyp23lbimbrchfbfaj1biwnl5xhhmrjm"; depends=[BH Boom BoomSpikeSlab xts zoo]; }; - btergm = derive2 { name="btergm"; version="1.7.0"; sha256="1xip1cr8j9blq4xnkj05f7c4alhij1i1k48ywhqr0bq09pi4rylc"; depends=[boot coda ergm igraph Matrix network ROCR sna speedglm statnet statnet_common texreg xergm_common]; }; + bst = derive2 { name="bst"; version="0.3-14"; sha256="02rnnv3f89329kw81a1v88wjzrfjshqjijw5hp3zyydcsfa3j088"; depends=[doParallel foreach gbm rpart]; }; + bsts = derive2 { name="bsts"; version="0.6.5"; sha256="1ywk73f5dnlpwz1hl1rpaxnvg9zag70fs237gw3gc8gsdydc7dlk"; depends=[BH Boom BoomSpikeSlab xts zoo]; }; + btb = derive2 { name="btb"; version="0.1.3"; sha256="0ac6jfk66ij4av5i63gm69ry7vfp08ka6l6l3y28ycf10fzp84k8"; depends=[Rcpp sp]; }; + btergm = derive2 { name="btergm"; version="1.8.2"; sha256="16vyxyg3nc7p65nrg46f5mh1py3i6vxk34m9645376s80gxkspcn"; depends=[boot coda ergm igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; }; btf = derive2 { name="btf"; version="1.1"; sha256="0n1h4hmjpvj97mpvannh3s5l08m4zfv0w64hrgdv4s5808miwfzc"; depends=[coda Matrix Rcpp RcppEigen]; }; bujar = derive2 { name="bujar"; version="0.2-1"; sha256="0g6mj1x9zbxkn3kxwbs2ncjfsicicvyr92krz8yqrms042gbk9ji"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms]; }; + bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; + bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; }; + burnr = derive2 { name="burnr"; version="0.1.2"; sha256="1cmf820148wmm9m8f41r81kckhn2iv3cw6k9qdybcxy1j1m520jp"; depends=[ggplot2 plyr reshape2]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; bvls = derive2 { name="bvls"; version="1.4"; sha256="18aaf7kk5mks3a59wwqhm1ckpn6s704l9m5nzy0x5iw0s98ijbm2"; depends=[]; }; - bvpSolve = derive2 { name="bvpSolve"; version="1.3.2"; sha256="1y6axzpbk7vnm2hsvihhci3cbbl61rlfc4kmfr335l77l6q2sd55"; depends=[deSolve rootSolve]; }; + bvpSolve = derive2 { name="bvpSolve"; version="1.3.3"; sha256="1q5sh3kj1c07zq7mx8sh4ggp1fvwh86394qrc3ildj4wrbakmzib"; depends=[deSolve rootSolve]; }; + bytescircle = derive2 { name="bytescircle"; version="1.1"; sha256="0c83d37kijcvr00pc4qqdci14cpbg6988izyjfjk1yliavyc6mwf"; depends=[]; }; c060 = derive2 { name="c060"; version="0.2-4"; sha256="1yzy0p6041rygqfwzb8dpyc7jq12javmhlvdcmmc7p59bbk7wv3j"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; + c212 = derive2 { name="c212"; version="0.90"; sha256="15s0482kl7zd2kzxcyzd7gdclv1z8yn4x70cgsdlbmd5047pcn9k"; depends=[coda]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; cAIC4 = derive2 { name="cAIC4"; version="0.2"; sha256="13sp3wywv82wgi1vsbxwn68v9xigy0fi3mcwyxjmmgmnsxns2fza"; depends=[lme4 Matrix]; }; - cIRT = derive2 { name="cIRT"; version="1.1.0"; sha256="0gp3mmw1s57wg6rvh78261l4nwqg0zpr98q27v389fz2scab637d"; depends=[Rcpp RcppArmadillo]; }; - cOde = derive2 { name="cOde"; version="0.2.1"; sha256="1zbc4armnzjbf0n4a5vby4m2ls9xpf6dhllzm3f3d02cbywacijr"; depends=[]; }; + cIRT = derive2 { name="cIRT"; version="1.2.0"; sha256="1qgcga9rk4xqz1i2rzwwf11sip3s3gni44czg9d8sjd725hx1pmz"; depends=[Rcpp RcppArmadillo]; }; + cOde = derive2 { name="cOde"; version="0.2.2"; sha256="0v26ilbkg2af4mgn639mnslvvwlsq6il3pxx5brwdsd4816saav4"; depends=[]; }; cSFM = derive2 { name="cSFM"; version="1.1"; sha256="1znxsqa8xdifmryg7jiqbpzm837n4n862kg5x1aki52crc4zyk3k"; depends=[MASS mgcv mnormt moments sn]; }; - ca = derive2 { name="ca"; version="0.64"; sha256="09496pzm7cms8v38vbyspsd2kvff3s31xpqlq4mf04sjh0vdahjs"; depends=[]; }; + ca = derive2 { name="ca"; version="0.70"; sha256="0730c7nk49hz0k1i5nnhq2j3wbhrlhr1qvb50mk8vmqkbhb1pz1l"; depends=[]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; caTools = derive2 { name="caTools"; version="1.17.1"; sha256="1x4szsn2qmbzpyjfdaiz2q7jwhap2gky9wq0riah74q0pzz76ank"; depends=[bitops]; }; + cablecuttr = derive2 { name="cablecuttr"; version="0.1.1"; sha256="1v3zhaxkp1h6lack2qk0v4zxh6fd0ymjnikw6bs7k540w2vrbs1g"; depends=[httr jsonlite]; }; cabootcrs = derive2 { name="cabootcrs"; version="1.0"; sha256="0a6y04jq837k1pk8b9nhgz7rima7s8jid6vdjyfvrqshgaiabg1q"; depends=[]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; - cairoDevice = derive2 { name="cairoDevice"; version="2.23"; sha256="0l83ssravr0jx6clvm8ppyh1hvyf8zkkl509hafphzfp29nkiamh"; depends=[]; }; - calACS = derive2 { name="calACS"; version="2.2.1"; sha256="16vzkvcdx0ppf6q03j93g4lgzn3an9dcpj9c5d8k3z9dspvim5vq"; depends=[]; }; + caesar = derive2 { name="caesar"; version="0.1.0"; sha256="1l0z64fsifx37j2h61kzygbwr3z3cncn48znrpb5cq10ma42igqf"; depends=[binhf]; }; + cairoDevice = derive2 { name="cairoDevice"; version="2.24"; sha256="1xbjxz1cxnwzvb6hjns2kk97krmx24chpyvjaa25xwmvy4x6qcps"; depends=[]; }; + calACS = derive2 { name="calACS"; version="2.2.2"; sha256="0a53k2rzyjksb0ypr5zrask4a6mgiyrqx0l2z3lm218y8pk2jf1w"; depends=[]; }; calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.2"; sha256="010nb1nb9y7zhw2k6d2i2drwy5brp7b83mjj2w7i3wjp9xb6l1kq"; depends=[MASS]; }; calibrator = derive2 { name="calibrator"; version="1.2-6"; sha256="1arprrqmczbhc1gl85fh37cwpcky8vvqdh6zfza3hy21pn21i4kh"; depends=[cubature emulator]; }; + callr = derive2 { name="callr"; version="1.0.0"; sha256="05gp4y69ixajvmhrh1qrn5cnzj9jhfdxrfxnm2l2xfisfa680mic"; depends=[]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; camel = derive2 { name="camel"; version="0.2.0"; sha256="0krilird8j69zbll96k46pcys4gfkcnkisww138wslwbicl52334"; depends=[igraph lattice MASS Matrix]; }; - camtrapR = derive2 { name="camtrapR"; version="0.98.0"; sha256="08hx3h4348hw3y230371pgvlw3q77srhang3mhlim7b48s38dmbf"; depends=[overlap rgdal secr sp]; }; - cancerTiming = derive2 { name="cancerTiming"; version="3.1.5"; sha256="1hs93brw5cnk2fk114aqvdcf020wq6dmnhcirw93y4xm79bqyjx5"; depends=[gplots LearnBayes]; }; - candisc = derive2 { name="candisc"; version="0.6-7"; sha256="1g2vypcniy94h462kylmzraa6q3ys9m0r1cn21dm8rzzjxid9g3g"; depends=[car heplots]; }; - cape = derive2 { name="cape"; version="1.3"; sha256="1qvjbnxydc16mflg1rmgp2kgljcna8vi88w34cs6k12wpgxmvz1f"; depends=[corpcor evd fdrtool igraph Matrix qpcR shape]; }; + camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; + camtrapR = derive2 { name="camtrapR"; version="0.99.7"; sha256="0yhpxx7p02j10b2ascdf0mqhlv8gssi6v9g4pc0s4p6bi2zhs7m6"; depends=[overlap rgdal ritis secr sp taxize]; }; + cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; + cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; + candisc = derive2 { name="candisc"; version="0.7-2"; sha256="0sbvngpyni4pagqb5xqjnk5yjd391rdjqq7aypnm2wd3i1am90hm"; depends=[car heplots]; }; + cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; }; caper = derive2 { name="caper"; version="0.5.2"; sha256="1l773sxmh1nyxlrjz8brnwhwraff826scwixrqmgdciqk7046d35"; depends=[ape MASS mvtnorm]; }; capm = derive2 { name="capm"; version="0.9.1"; sha256="1njfw4pl6hmapdspvwabn7db2c4nqf3ja4rlv1lmpaakinzhivj2"; depends=[deSolve FME ggplot2 maptools reshape2 rgdal shiny sp survey]; }; captioner = derive2 { name="captioner"; version="2.2.3"; sha256="0xg72pmgm84f0v45phfwxpsslhf12nhn1swmrj1yifj7g9sjvybj"; depends=[]; }; - captr = derive2 { name="captr"; version="0.1.5"; sha256="1z3l3wgvxylnjsybnvcl7aphkp60xpx43xs0n9nnan07fcb2n7bd"; depends=[curl jsonlite]; }; - capushe = derive2 { name="capushe"; version="1.1"; sha256="00rbsir00ibxa9r6b17sa1jryjxjjygzsan08pl9wa65r0gxzrkm"; depends=[MASS]; }; + captr = derive2 { name="captr"; version="0.2.0"; sha256="04bg1d22n2h24w4j46fg30p1n85qvy5868sllrcwybrv4j15xh1f"; depends=[curl jsonlite]; }; + capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="2.1-1"; sha256="1wzgy2pcylhvgrlly8v3gi29gc3gimrhmjvhrr93b1cy0wwjj0wx"; depends=[MASS mgcv nnet quantreg]; }; + car = derive2 { name="car"; version="2.1-4"; sha256="0a6v7rsd1xsdyapnfqy37m7c4kx9wslkzsizc9k0lmnba0bwyfgx"; depends=[MASS mgcv nnet pbkrtest quantreg]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; cardidates = derive2 { name="cardidates"; version="0.4.7"; sha256="0dxb2941w56s479laf315hqh9iv3k2l1ds7k8hdl9akcacagjgs2"; depends=[boot lattice pastecs]; }; - cardioModel = derive2 { name="cardioModel"; version="1.3"; sha256="1r52pjywp2x5mm2hg296q893djkhlzh8d7vq9pg76qdpi0m9ralg"; depends=[lubridate nlme]; }; + cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; care = derive2 { name="care"; version="1.1.9"; sha256="0fx5cbi1fx3hpyzghn1788rkh91i10z1ngryqc1v3iqqn3akbk4j"; depends=[corpcor]; }; - caret = derive2 { name="caret"; version="6.0-64"; sha256="1pgbqzivks6vpaw2pq72yv81a98dm264hmj2vnk4vhyvdi91ihq9"; depends=[car foreach ggplot2 lattice nlme plyr reshape2]; }; + caret = derive2 { name="caret"; version="6.0-73"; sha256="1jzaqwv4glyqqnfbpalgajd0ag866247vvdh5i83ffqs1yhs984h"; depends=[car foreach ggplot2 lattice ModelMetrics nlme plyr reshape2]; }; caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.0"; sha256="0v9gyp81abrbm8b79ch927iqh0v84q5222bvg1wx8n65vx59sx42"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; }; caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; caroline = derive2 { name="caroline"; version="0.7.6"; sha256="1afxxbrd7w628l4pxdmvwbs7mbgxlhnfq3nxk2s93w47gn7r9fp7"; depends=[]; }; - cartography = derive2 { name="cartography"; version="1.2"; sha256="03p95vx3qhcf8kkb265229ki1njmhw3d56hypm9gq9wpnvk4gw6b"; depends=[classInt sp]; }; + carpenter = derive2 { name="carpenter"; version="0.2.0"; sha256="0n2w8l9gch0zvq3k0bsqqq28vf6s0czn3ybm0sy2i1bkq85zfm82"; depends=[dplyr lazyeval magrittr pander tidyr]; }; + cartogram = derive2 { name="cartogram"; version="0.0.2"; sha256="055aq2fmbx6ypyqsj427l37px8fld4b9bmc2kcmsi6fmnncb5pxa"; depends=[rgeos sp]; }; + cartography = derive2 { name="cartography"; version="1.4.1"; sha256="0bblhnz94rhjrrm0v9mvlvqrcqfxq4762crijk34xf9cxcpmhjx4"; depends=[classInt raster rgeos rosm sp]; }; carx = derive2 { name="carx"; version="0.6.2"; sha256="1wijkpbv2x75ay9pba4sjazjpalrd31zclnnansmhghf1wiizciq"; depends=[matrixStats mvtnorm nlme tmvtnorm xts zoo]; }; - caschrono = derive2 { name="caschrono"; version="1.4"; sha256="1l9hmsacynh73kh14jrp7a42385v78znn9ll1jchzgkyz2x4dibw"; depends=[forecast Hmisc its timeSeries]; }; - caseMatch = derive2 { name="caseMatch"; version="1.0.6"; sha256="0ak5q7pijmq359sm2vy5rr1szxv0kzg6ydka3ny24vsx2lx3fdrs"; depends=[]; }; + caschrono = derive2 { name="caschrono"; version="2.0"; sha256="091zqin2cr9p50zmifrb52dxy10zflm7f0lr9nissy589qjdd0gk"; depends=[Hmisc zoo]; }; + caseMatch = derive2 { name="caseMatch"; version="1.0.7"; sha256="1xd7mlnknjrilxcp0w0b36aaiql6jdqgyin1823r2x8vl9r4aqns"; depends=[]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; - catR = derive2 { name="catR"; version="3.6"; sha256="1a5wfi944x0a8bgknlgrdxqj5h2zz15lq8k0iavd1k8bifir3pdi"; depends=[]; }; - catdap = derive2 { name="catdap"; version="1.2.2"; sha256="02rz5wqbbvh73gjfh4bg31qcpfa48b4bm3h1i19r3siajvqaxkkb"; depends=[]; }; + catR = derive2 { name="catR"; version="3.12"; sha256="15db9mfpnrrghiksfrfqqwfhw6fwlqlabc12xq1szg010k343dvb"; depends=[]; }; + catdap = derive2 { name="catdap"; version="1.2.4"; sha256="0vvrlbdjml1cxf6jafjycv0k3kzd2xy1zcwjv0rh3cswxmvpnh3a"; depends=[]; }; catdata = derive2 { name="catdata"; version="1.2.1"; sha256="0fjylb55iw8w9sd3hbg895pzasliy68wcq95mgrh7af116ss637w"; depends=[MASS]; }; cate = derive2 { name="cate"; version="1.0.4"; sha256="0qck6675xm5xbw440m1b6n38wjwk7izx3s0zpxbmhc9wh12c5prk"; depends=[corpcor esaBcv leapp MASS ruv sva]; }; catenary = derive2 { name="catenary"; version="1.1.1"; sha256="0gd46zvd51xvra0d7k7qdcmfl71vcfk750lcafkhmr4cg0vkqcz7"; depends=[boot ggplot2]; }; cati = derive2 { name="cati"; version="0.99.1"; sha256="0sg6qagv1wiygylgygjfn7v4n99ifaaa34qvaspmm9b4fyfcxqa5"; depends=[ade4 ape e1071 FD geometry hypervolume mice nlme rasterVis vegan]; }; - catnet = derive2 { name="catnet"; version="1.14.8"; sha256="03y7ddjyra3cjq7savdgickmw82ncx4k01rn752sks6rpl6bjslc"; depends=[]; }; + catlearn = derive2 { name="catlearn"; version="0.3"; sha256="1bqcv58g4111yjschzdikb130as4wv08pxppzwpjh4k2pg929jmk"; depends=[Rcpp]; }; + catnet = derive2 { name="catnet"; version="1.15.0"; sha256="0z2ps2wb33hc0dg08v70gvpy2zibr6kqjjv90g07hkmrhp6zjk5n"; depends=[]; }; catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; - causaleffect = derive2 { name="causaleffect"; version="1.2.4"; sha256="10hn2wy47n4j7d43bvzj1rdi8fjrg2p3czcf50631smg8a2rarf0"; depends=[ggm igraph XML]; }; + causaleffect = derive2 { name="causaleffect"; version="1.3.3"; sha256="1nglsdnd0zb0qzyyw22fnlqzc8ds9mqdnc9anl9g3pdn9lz2wkqc"; depends=[ggm igraph XML]; }; causalsens = derive2 { name="causalsens"; version="0.1.1"; sha256="1z92ckqa07ajm451wrldxx9y43nawlvj2bsz0afxc9mrhjwjg5dh"; depends=[]; }; - cba = derive2 { name="cba"; version="0.2-15"; sha256="1qw1r5drxip4y1a59hwz92iw50nj3vkxynsisv28srnwr58imnaj"; depends=[proxy]; }; + cba = derive2 { name="cba"; version="0.2-18"; sha256="15fjnc9mg30fhm9rfsgz7d24hx83ra8bgyc2s1sz5gda4ppq53pr"; depends=[proxy]; }; + cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; cbsodataR = derive2 { name="cbsodataR"; version="0.2.1"; sha256="0nsg0fzaqhzv8r2lwz5xlybwgv25c0a2hid91ky95yaqvnjrp6mq"; depends=[jsonlite whisker yaml]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.2"; sha256="166spwqsqbp42mr1acglydlxspcpn8vhnim8r3s9m81sa9pmazpj"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; @@ -3286,330 +4046,415 @@ in with self; { cccp = derive2 { name="cccp"; version="0.2-4"; sha256="1hw0xzfdycrnhkym5va430jk1b9ywf7wbm9qyj4a62n210hk4nzc"; depends=[Rcpp RcppArmadillo]; }; cccrm = derive2 { name="cccrm"; version="1.2.1"; sha256="180hzxm4z91hh008lysq1f0zky7qngg5z1laa1c119g4rqqcdskl"; depends=[gdata nlme]; }; ccda = derive2 { name="ccda"; version="1.1"; sha256="0ya9x1b41l0pjyyfdswjyip0c2v8z7gncbj7cdz0486ad75229x7"; depends=[MASS]; }; + ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.2"; sha256="1q6fcmd2byjpwsqa9a9m9w8dm9gy76g9477p9jb8q92kiv2rs6bq"; depends=[Rcpp sparsebnUtils]; }; ccgarch = derive2 { name="ccgarch"; version="0.2.3"; sha256="0angffla3sk9i86v6bbsav95fp3mz5yvq7qfv0fx2v0nd2cx116w"; depends=[]; }; - cchs = derive2 { name="cchs"; version="0.2.0"; sha256="15bihlpw2q7mcna9200hlzvvbbyr3rrc0xbxyjca1n9dbgsqpibp"; depends=[survival]; }; - cclust = derive2 { name="cclust"; version="0.6-20"; sha256="1davlnrikfriczdwlprqd46axs9acvz30hhni134cisy11snlq7s"; depends=[]; }; - cda = derive2 { name="cda"; version="1.5.1"; sha256="09a2jb25219hq6if3bx03lsp94rp2ll9g73dhkdi665y7rlhgqwh"; depends=[dielectric plyr randtoolbox Rcpp RcppArmadillo reshape2 statmod]; }; + cchs = derive2 { name="cchs"; version="0.3.0"; sha256="0163qvy1k39bwbbidr7wj6cs0nv8m8nh0as9532j8mshq14d0i8c"; depends=[survival]; }; + cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; }; + cda = derive2 { name="cda"; version="2.0.0"; sha256="1vq90z6kafiz5b884hxsz3lg8a0zis1n475lmvwlymcam5rpgjrc"; depends=[randtoolbox Rcpp RcppArmadillo reshape2 statmod]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; - cdcfluview = derive2 { name="cdcfluview"; version="0.4.0"; sha256="1b0l6vqhks9mqpx3c94qip3dd8031rl4jjqjnmdpcvmfhg335yjf"; depends=[dplyr httr pbapply xml2]; }; + cdcfluview = derive2 { name="cdcfluview"; version="0.5.1"; sha256="0k63hrx3cc04xpi2sxl5g8mn7lc7rh4q33mj3filyiyppj16jixf"; depends=[dplyr httr jsonlite purrr readr V8 xml2]; }; cdcsis = derive2 { name="cdcsis"; version="1.0"; sha256="1fxdsaqpjhpffn2fxddfcrx8wxwyvfws6rxkpp57g25980xiyzkd"; depends=[ks]; }; - cdfquantreg = derive2 { name="cdfquantreg"; version="1.0.3"; sha256="1czb9v2naxzxfyga2npfljlgx15k1mspqksn6jql5faksbgfqb0v"; depends=[Formula MASS pracma]; }; + cdfquantreg = derive2 { name="cdfquantreg"; version="1.1.1"; sha256="17ghqcxnaz25n0qrar1bs2i4hcpn1gdzdv53r4krivdzkbi9p90a"; depends=[Formula MASS pracma]; }; + cdlTools = derive2 { name="cdlTools"; version="0.11"; sha256="0jqr0j6hwqwx574659i3mfzf4hcmmxfd3x28d52dwgpwsv0r10gn"; depends=[raster RCurl rgdal XML]; }; cdom = derive2 { name="cdom"; version="0.1.0"; sha256="00xqqqhskjlkz8ii7kqyabxk8995w7g9jiz1isyqjpwg8nsa3x28"; depends=[broom ggplot2 minpack_lm tidyr]; }; + cds = derive2 { name="cds"; version="1.0.3"; sha256="1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05"; depends=[clue colorspace copula limSolve MASS]; }; cec2005benchmark = derive2 { name="cec2005benchmark"; version="1.0.4"; sha256="0bwv63l31hiy63372nvnyfkpqp61cqjag0gczd2v2iwsy3hyivpd"; depends=[]; }; cec2013 = derive2 { name="cec2013"; version="0.1-5"; sha256="07i2vp1x3qaw5di5vr5z70d47hh9174pjckjlhgv0f2w97slwc1i"; depends=[]; }; celestial = derive2 { name="celestial"; version="1.3"; sha256="0icsrpw8y7r0ls8ch5b25fl4rnvs6x5y2wscmcmpp4fa4x64qqg6"; depends=[RANN]; }; cellVolumeDist = derive2 { name="cellVolumeDist"; version="1.3"; sha256="00hq3nbfbnmg2lhrqd0glkh5ld50fv54ll3q6v875d1lgs44sln1"; depends=[gplots minpack_lm]; }; - cellranger = derive2 { name="cellranger"; version="1.0.0"; sha256="1zyf9hxhj1s660xyqp3klc11plfhyzv4fi03p7j2p5grw280cm2x"; depends=[]; }; + cellWise = derive2 { name="cellWise"; version="1.0.0"; sha256="1cpkz256z6ngqdd1wa0ajyjcl0j1xln2f0hwsw24wfzgb8sdj6ac"; depends=[ggplot2 gridExtra matrixStats reshape2 scales]; }; + cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; }; cem = derive2 { name="cem"; version="1.1.17"; sha256="1jnhsrc1jhax3zlw9ynla7g9z5i4w01iar7f7hmv92kp1cwh8rbd"; depends=[combinat lattice MatchIt nlme randomForest]; }; cems = derive2 { name="cems"; version="0.4"; sha256="0mk02m702xfr1gh0l3973z1hdpncgjl2vfd1k1iss5s64k56gs4q"; depends=[plotrix rgl vegan]; }; censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; }; - censReg = derive2 { name="censReg"; version="0.5-20"; sha256="15k7iq4275dyah3r47vgxsx6g6mr7ma53lkv6d1n89bczzys72kx"; depends=[glmmML maxLik miscTools sandwich]; }; - censorcopula = derive2 { name="censorcopula"; version="1.0"; sha256="1y2vh6k6v5j5k3w4mk4mglv92103bz1mihf41jd55ky39dyr0gmr"; depends=[copula]; }; + censReg = derive2 { name="censReg"; version="0.5-22"; sha256="0s955gzd40nwl2qq20ss1yqjfpdrhv6bwbiksvd1smg4ip038w5q"; depends=[glmmML maxLik miscTools plm sandwich]; }; + censorcopula = derive2 { name="censorcopula"; version="2.0"; sha256="16pk4xlpliif02qznrhvl8qmrr6k4kknygqxcm83nsjxy6dcyga8"; depends=[copula]; }; + censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; }; censusr = derive2 { name="censusr"; version="0.0.2"; sha256="1x2s0q0d30hsb5sqdgvlz8anv5vcsm0ld9p96jzsin6lfsgbb1dm"; depends=[dplyr httr]; }; + censys = derive2 { name="censys"; version="0.1.0"; sha256="0r0yvaidn0qn96hx461415hywsjfgaz9wvvdssx7w97v2ndnk9sy"; depends=[httr jsonlite purrr stringi]; }; cents = derive2 { name="cents"; version="0.1-41"; sha256="03ycbd0c8b7danbblaixg6sm7msr9ixkanqswczqa8n2frhjfgj0"; depends=[]; }; cepp = derive2 { name="cepp"; version="1.7"; sha256="01hvm6586xnb1crvk7brqh3dm2j44ia5lrl5swnf6pb682yskbq0"; depends=[randtoolbox trust]; }; cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; }; - cffdrs = derive2 { name="cffdrs"; version="1.7.3"; sha256="1v2iwphw468lpw2im50vf2h762sq8fj84fakqr96zb7im9890zw1"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; }; + cffdrs = derive2 { name="cffdrs"; version="1.7.5"; sha256="1v5acbp8469b2mbv3x6986f8rw6hh34jqkwdm6fp50dx1r8x9p1x"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; }; + cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; - cgam = derive2 { name="cgam"; version="1.3"; sha256="0lyhgiwskvcbbzd6y9ryndk4m3hjcwhd2ysnlhx7vkazp8936y87"; depends=[coneproj]; }; + cgam = derive2 { name="cgam"; version="1.6"; sha256="04mwkij3fyamm8i1wnd87vihcg7c45872n10q9ax5f2nby95ddrc"; depends=[coneproj svDialogs]; }; cgdsr = derive2 { name="cgdsr"; version="1.2.5"; sha256="1w5nd4hirlw8s9a8ysr6102pq9sbz4820qni06g98ykyg7yb32hx"; depends=[R_methodsS3 R_oo]; }; cggd = derive2 { name="cggd"; version="0.8"; sha256="06z0mrxxc02parn9vkjv89qq4yqmsccsy319fi6c5iarssyvin1r"; depends=[]; }; cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; }; cghFLasso = derive2 { name="cghFLasso"; version="0.2-1"; sha256="0b1hnjf9g0v47hbz0dy9m6jhcl1ky20yyhhmm8myng2sndcpjsbf"; depends=[]; }; cghseg = derive2 { name="cghseg"; version="1.0.2-1"; sha256="0q9ks19r21b6p0gfd7mnsgp7pbihz3yzmbzijlrx178f1z9yjx5q"; depends=[]; }; cgwtools = derive2 { name="cgwtools"; version="3.0"; sha256="01888n056x4c8g0676jnbh6d89hamzxrh33aw6r28mzlnmfy5lmw"; depends=[]; }; - changepoint = derive2 { name="changepoint"; version="2.2.1"; sha256="1ifqv2qv8lwsfwia14dn53hs29xc027ap397l2wpmmmrzx0v6vrf"; depends=[zoo]; }; + changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; }; + changepoint_np = derive2 { name="changepoint.np"; version="0.0.2"; sha256="03i4l59h8cr6bizbqn288x9r85kvaz1dyhkv5fsj1189qpdi9m88"; depends=[changepoint zoo]; }; cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; }; chebpol = derive2 { name="chebpol"; version="1.3-1789"; sha256="1505zdzvc9drw7n8qw5jmqligjgp5gwwki4wlk8dsm0p3p06dvd2"; depends=[]; }; - checkmate = derive2 { name="checkmate"; version="1.7.3"; sha256="11xwdvpi6i9cm3fp44fgish0vxpb6jqbcd24hmppm39ixf28ajg2"; depends=[backports]; }; - checkpoint = derive2 { name="checkpoint"; version="0.3.15"; sha256="1mzf5d2mxwc7l9149a0sbxamxnmq4xc1ia8n5sd412sv5gmzxw89"; depends=[]; }; - cheddar = derive2 { name="cheddar"; version="0.1-630"; sha256="15hx9pm4pwmzwb82qgbf4ryy7zbsv64zw4qm6v7xkkaw27rjl4vg"; depends=[]; }; + checkmate = derive2 { name="checkmate"; version="1.8.2"; sha256="1zqcggl9m7slvc0q6zyhssdypb7jzf3l9byl5vxh1qdwjiw2y64g"; depends=[backports]; }; + checkpoint = derive2 { name="checkpoint"; version="0.3.18"; sha256="17r3hamj66hx1w050yim21b8kp1mbfkjh6rsdmd0z3s04wash7bi"; depends=[]; }; + cheddar = derive2 { name="cheddar"; version="0.1-631"; sha256="0s6v3xcpv8ppgx6q6h2hgrjcf3f3i87kmylnr9q9zhry7729aiyn"; depends=[]; }; chemCal = derive2 { name="chemCal"; version="0.1-37"; sha256="1sbmr8arczc65nzbgr5rfk2mbbnk6h60ni9cd9jngbhgdf0g1scw"; depends=[]; }; - chemometrics = derive2 { name="chemometrics"; version="1.3.9"; sha256="089zlp4ba6yyxjh2p7fcph29lnxyk1gifb44fw7lsslvg19xlgjm"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; + chemometrics = derive2 { name="chemometrics"; version="1.4.1"; sha256="019r0n4s6lzzjyp94zv12gn113p69c4s4ji0aqinfzb5fw0dlikn"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; cherry = derive2 { name="cherry"; version="0.6-11"; sha256="0ixrzbzg559h0qb33b9158rk6w6as2b34b7iq5vzm429cpyzl7l8"; depends=[bitops lpSolve Matrix slam]; }; + chi = derive2 { name="chi"; version="0.0"; sha256="0mn402vwiwcjdbchk1d3pdq4ir992aa0h3xf1m7y9mfkqyzkdqpj"; depends=[]; }; + chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; childsds = derive2 { name="childsds"; version="0.5"; sha256="1fmisp6k375harjxsyzpwnd8zh3kd7vlhin18q1svfwdjyy9k3xh"; depends=[]; }; - chillR = derive2 { name="chillR"; version="0.62"; sha256="0fj7kymwdhi4svqarkljln01d78bspflh910s53r2sj78l9sv53g"; depends=[fields httr Kendall pls readxl sp XML]; }; + chillR = derive2 { name="chillR"; version="0.65"; sha256="0r584h2y2w7hcrdxvf7xlw4ivbyid293li0scxwvkd4v8s78kmcm"; depends=[fields httr Kendall pls raster readxl RMAWGEN sp XML]; }; + chinese_misc = derive2 { name="chinese.misc"; version="0.1.1"; sha256="0gcr0lw3ns3wbjchhzb0alabs4d8fmq8gvf4ggph3m8fcyfch0cc"; depends=[jiebaR NLP Ruchardet stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; - chngpt = derive2 { name="chngpt"; version="2015.9-5"; sha256="0yqapf9fq0arh1hgwd5lklp6fklia926n0h1980731hqxd362bpq"; depends=[kyotil MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2016.7-31"; sha256="1hjqdkqai6aij3giarbxasijipb376qm081ri9w6snd5gy6izzsi"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-1"; sha256="07nnqqczi9p3cffdijzx14sxhqv1imdakj7y94brlr5mbf5i4fl4"; depends=[AlgDesign]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; chopthin = derive2 { name="chopthin"; version="0.2.1"; sha256="0sib3ic79hff5w2xmmw4z9c6bax33jczrcijs7ywdb8y3viwy5av"; depends=[Rcpp]; }; - chords = derive2 { name="chords"; version="0.90"; sha256="0wz5glm15615xb3cicc0m34zg78qzng3lpmysswbrfhc8x4kkchh"; depends=[MASS]; }; - choroplethr = derive2 { name="choroplethr"; version="3.5.0"; sha256="0askw7flbh3yd6ycmymzqxxgad7hzlp294dw7dijxyv0z5051d2y"; depends=[acs dplyr ggmap ggplot2 Hmisc R6 RgoogleMaps scales stringr WDI]; }; - choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.0"; sha256="0xfqw7spjali13sdq0jp3p62fgzvfm2ixbbcay8iwjm5plh5p5sw"; depends=[ggplot2]; }; - choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0"; sha256="00dgwikfxm1p1dqz1ybsxj1j8jcmrwa08m2d3zsww2invd55pk7g"; depends=[]; }; + chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; }; + choroplethr = derive2 { name="choroplethr"; version="3.5.3"; sha256="1iagrm8ybr7whn77i96cnyl2kil96lb9zznlbc93kcy17jbf4yns"; depends=[acs dplyr ggmap ggplot2 Hmisc R6 RgoogleMaps scales stringr WDI]; }; + choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.1"; sha256="13ljs21hdhiv6n4napmk1gjnjhpll6j5wyijzv4xnnbi1y3ns7a9"; depends=[ggplot2]; }; + choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; - chron = derive2 { name="chron"; version="2.3-47"; sha256="1xj50kk8b8mbjpszp8i0wbripb5a4b36jcscwlbyap8n4487g34s"; depends=[]; }; - chunked = derive2 { name="chunked"; version="0.2.0"; sha256="13fi56dpvvf1shchvyank31xmb8wh9rszb74p2bfh3b5shwygx97"; depends=[dplyr LaF lazyeval]; }; + chron = derive2 { name="chron"; version="2.3-50"; sha256="1w3sl60gsirniqslb3pa75caiqbzbvc44phpd4czvwkb62xx1vx9"; depends=[]; }; + chunked = derive2 { name="chunked"; version="0.3"; sha256="1qhrq957w8nyxndvrnf3xh1p1g7f9qjyr12ybcysgrz4lk0q8xcs"; depends=[DBI dplyr LaF lazyeval]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; - circlize = derive2 { name="circlize"; version="0.3.4"; sha256="02d2di0v6cqmp5rszrmynrnyg00p6wd7d000ghbwsjw2679ysr13"; depends=[colorspace GlobalOptions shape]; }; + circlize = derive2 { name="circlize"; version="0.3.9"; sha256="0zaqisklz28y262lwh11m4fi5x6rr6hzw4fzibgsx4x34nxxavlb"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-7"; sha256="1kgis2515c931ir76kpxnjx0cscw4n09a5qz1rbrhf34gv81pzqw"; depends=[boot]; }; - cit = derive2 { name="cit"; version="2.0"; sha256="16i3riv5fnaih240hkr8q9zpgxjr26abv9mg6spi6cs95ny2rybs"; depends=[]; }; + cit = derive2 { name="cit"; version="2.1"; sha256="1kiph7znr9fiq704wfbms6hsl4shxfqijrlh4dhmik9x9m8sj538"; depends=[]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; + citr = derive2 { name="citr"; version="0.2.0"; sha256="1nzn0yw74k6zkwzb6spfzqkj3cbx6ry6ypbsnhy6w2flabnnvy4v"; depends=[assertthat curl miniUI RefManageR rstudioapi shiny yaml]; }; cjoint = derive2 { name="cjoint"; version="2.0.4"; sha256="0c2vs5zbw83r7jlm6kwjylyd5yjnyz5qaqnk0lh9x54jd0f3nqwv"; depends=[ggplot2 lmtest sandwich survey]; }; ckanr = derive2 { name="ckanr"; version="0.1.0"; sha256="1cvn0cih763f0ppl1y90vnwj3cgqyb7az89sn12nyn2qb6igiqyl"; depends=[httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.14.4"; sha256="0d4vl7xrrwbhhx56ymw52rb5svw9nskxdya4dl04lw1qxc45p4jy"; depends=[Rcpp RcppArmadillo]; }; - clarifai = derive2 { name="clarifai"; version="0.2"; sha256="10mbgdg5hpdx6v84zn1j2gfl7rj2cl0dizxplf764qrc6rfhvsxm"; depends=[curl jsonlite]; }; + clarifai = derive2 { name="clarifai"; version="0.4.0"; sha256="0qlv4aj5vlrrc0h6gyryly33rfz5jz7cahw5l6qdbba4dibrkajm"; depends=[curl jsonlite]; }; class = derive2 { name="class"; version="7.3-14"; sha256="173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"; depends=[MASS]; }; classGraph = derive2 { name="classGraph"; version="0.7-5"; sha256="19jb9jr1gfg4karymrbilh0zjrlsczhy2q03x5b0jxnh4ykhxfj8"; depends=[graph Rgraphviz]; }; classInt = derive2 { name="classInt"; version="0.1-23"; sha256="07anmwmchri4ppl01y041zh3xdqsdwzv4n5jpr3crmpk39qwwhzq"; depends=[class e1071]; }; + classifierplots = derive2 { name="classifierplots"; version="1.3.2"; sha256="18xsjsfsr4dz791b0ap8lcbk7mnr3i0pspbal6n5ah864ngqvbvn"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; classify = derive2 { name="classify"; version="1.3"; sha256="0134h12h6v06d7ldj9qgqjhh5f5ap98pvr0v6d4k8dqndnn0pggy"; depends=[ggplot2 lattice plyr R2jags Rcpp reshape2]; }; classyfire = derive2 { name="classyfire"; version="0.1-2"; sha256="0rar3mi2m1wf14lmahjbpdh1jlnisvgsbx86xbqlb8c0f8zfzxq3"; depends=[boot e1071 ggplot2 neldermead optimbase snowfall]; }; - cleangeo = derive2 { name="cleangeo"; version="0.1-1"; sha256="1bahj4lf7fvf8qlbl7g2jh9a4vqr62llg43yklm380fky23n04r1"; depends=[maptools rgeos sp]; }; + cleanEHR = derive2 { name="cleanEHR"; version="0.1"; sha256="1ppjg72cfh9kdwl8kk7zxyr529xqcwpfcl5lisy7hgpqirma52qn"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; + cleanNLP = derive2 { name="cleanNLP"; version="0.24"; sha256="0j4im6518sqdyfwbfabc1q3g01nqfpshznq033193g9b519792z3"; depends=[dplyr magrittr RCurl readr rJava]; }; + cleangeo = derive2 { name="cleangeo"; version="0.2-1"; sha256="05zzp0dbkpljc9jcx05pdlkdwfbrh6h0l2zksq3cpaw5bvz5g1pl"; depends=[maptools rgeos sp]; }; + cleanr = derive2 { name="cleanr"; version="1.1.3"; sha256="0vf2c2inb729kzmpxaznqa2zwj80j1ix9198gc36zq41ag5pd7jk"; depends=[checkmate]; }; clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; }; - clhs = derive2 { name="clhs"; version="0.5-5"; sha256="0p1w5sb27qk609azywzz17c4f2cgdkrl88gckgrd3lg1cfa9vl7d"; depends=[ggplot2 plyr raster reshape2 scales sp]; }; - clickstream = derive2 { name="clickstream"; version="1.1.7"; sha256="0j87209pir852djga5dr1rdj6i554v4bpvhkk1i843lkfsfz4v12"; depends=[arules data_table igraph linprog plyr Rsolnp]; }; - clifro = derive2 { name="clifro"; version="2.4-1"; sha256="0yi8kgw4l2pxaa340avwfswfjsngdkfp3kv4cnnw9gr7y57pjaz1"; depends=[ggplot2 lubridate RColorBrewer RCurl reshape2 scales selectr XML]; }; + clhs = derive2 { name="clhs"; version="0.5-6"; sha256="0m7pw655d6jidrppk1z84z35n93k1alwq43jh28lf81ydw8finma"; depends=[ggplot2 plyr raster reshape2 scales sp]; }; + clickR = derive2 { name="clickR"; version="0.2.0"; sha256="01fsaqgc4fxf0p9ww6z3g84ybn5kgj7qyk781flhg7r4s51qmcwv"; depends=[beeswarm ClustOfVar lme4 lmerTest lqmm ordinal ReporteRs survival xtable]; }; + clickstream = derive2 { name="clickstream"; version="1.1.9"; sha256="0hg8ywnm82r5787qal19rcg7q0jvvrw6ifaya84p6sazwqwy8m4g"; depends=[arules data_table igraph linprog plyr Rsolnp]; }; + clifro = derive2 { name="clifro"; version="3.1-2"; sha256="0fa1r4rsl3cq8dmy0jxalga9qzhiwpdhkzmjgx2hfbkgklfdnr40"; depends=[ggplot2 lubridate RColorBrewer RCurl reshape2 scales selectr XML]; }; + clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; + climatol = derive2 { name="climatol"; version="3.0"; sha256="0wfqs8yk3m6wpm86yfhsg100d4x67bzz1871mxrs69r6ybrh30qx"; depends=[]; }; + climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-6"; sha256="0dyhqxrma8g4ny4afv6drr885m88q2b8g1n19yy3yjbrbddyz8yl"; depends=[caTools PCICt Rcpp]; }; clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; - climtrends = derive2 { name="climtrends"; version="1.0.5"; sha256="0pgdx0hhrqpnj3qf37ms7z9fhy4vvgichrpi4vvmin5xksmaczxa"; depends=[]; }; - climwin = derive2 { name="climwin"; version="0.1.2"; sha256="0nin43pi0q62ga710k1b6y5llrmf8aw4xhw5vrl6w01iqmz25v0g"; depends=[evd ggplot2 gridExtra lme4 lubridate MuMIn reshape]; }; + climextRemes = derive2 { name="climextRemes"; version="0.1.2"; sha256="1m9jb8n7df9v4yakgh2ncmaqnhdw1vkhfcg3k6cib07nz69wx98j"; depends=[extRemes]; }; + climtrends = derive2 { name="climtrends"; version="1.0.6"; sha256="01007b0av9kv6rx2kkp5y39xkk5nqsyqbxa5z43qdq5zgf5pwvd9"; depends=[]; }; + climwin = derive2 { name="climwin"; version="1.1.0"; sha256="10dpdv1nm5sxagac6vb2slqkxvpwa6q0jl2fwwkpr9pdmvacp4h4"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn numDeriv plyr RcppRoll reshape]; }; clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; }; - clinfun = derive2 { name="clinfun"; version="1.0.11"; sha256="13qc1kxbxbj9zpxb823vx0nl54pznyna8y0i167h43nvya2lf41l"; depends=[mvtnorm]; }; - clinsig = derive2 { name="clinsig"; version="1.1"; sha256="09h43psdwpd1d9pzl0r7rj08jzahmy4myc06066rdrnqyrjmvr99"; depends=[]; }; - clipr = derive2 { name="clipr"; version="0.2.0"; sha256="0y27k2s562cpva3a19yv5b9p99iympdx3084v59i3478ih9qw23r"; depends=[]; }; - clisymbols = derive2 { name="clisymbols"; version="1.0.0"; sha256="1g68kh1js6nssyzw4lpxp4d2h4rhlayhahaykxw4a4bd67fkw20p"; depends=[]; }; + clinfun = derive2 { name="clinfun"; version="1.0.13"; sha256="0l4brcfr960yplgx63hy6imszk1zy8my6issilx839hvs4d5z7l9"; depends=[mvtnorm]; }; + clinsig = derive2 { name="clinsig"; version="1.2"; sha256="1wgfl9kks57yizrf8z6x7dhmbl3a80q8nnj3a5n2hpc9yr8l9ijf"; depends=[]; }; + clipr = derive2 { name="clipr"; version="0.3.2"; sha256="13g1iwld4xijn5raip71a88vdn51dc056nnqaasb7g00zbbb8jwl"; depends=[]; }; + clisymbols = derive2 { name="clisymbols"; version="1.1.0"; sha256="0idnlx29ps4njiwf4afqzahkpjzz6lam93hxjrr67756k1lw1xjj"; depends=[]; }; clogitL1 = derive2 { name="clogitL1"; version="1.4"; sha256="0m9yrg9mzzfv5qkdf6w55xyrjdghyrf27kk7b4x2gyvwvi5b7dkm"; depends=[Rcpp]; }; + clogitLasso = derive2 { name="clogitLasso"; version="1.0.1"; sha256="1mm815w31n0jvbh2rwq15ja1mzvjaz1x846xq1949aj4pb692zrl"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; - cloudUtil = derive2 { name="cloudUtil"; version="0.1.10"; sha256="1j86vpd4ngrdpfjk44wb1mp0l88dxia64pjd2idfcd276giplh6s"; depends=[]; }; - clpAPI = derive2 { name="clpAPI"; version="1.2.6"; sha256="1kgzmzf87b0j43ch21anmm2d73bj2d16slmyavpbkdwg72dg1sjb"; depends=[]; }; + cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; + clpAPI = derive2 { name="clpAPI"; version="1.2.7"; sha256="19bn5d7qjj7g0x17jnh2snymcn2r2skzj35hkhsgcj5r43834f3r"; depends=[]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; - clue = derive2 { name="clue"; version="0.3-51"; sha256="1lhjd27lmwfsb7ffnbybv3yvw2mfca3hm03nb6mkk3alh2ncam2g"; depends=[cluster]; }; - clues = derive2 { name="clues"; version="0.5.6"; sha256="1g0pjj4as5wfc7qr3nwkzgxxxp3mrdq7djn8p8qjba6kcdjxak1i"; depends=[]; }; - clusrank = derive2 { name="clusrank"; version="0.1-1"; sha256="0p14lflhg3kjrdsyva2gnx5frs0fpnsn3fnda49paf29ynm3x7w4"; depends=[]; }; + clubSandwich = derive2 { name="clubSandwich"; version="0.2.2"; sha256="1ib6p58w8ax00cpgxcl6hhpig02d0lay9d2abdx084dbiyb45pad"; depends=[sandwich]; }; + clue = derive2 { name="clue"; version="0.3-53"; sha256="1wj23bjsrcn7b74vaqara6vwd6qz0wznyfk9zicm627cxcix7n3x"; depends=[cluster]; }; + clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; }; + clusrank = derive2 { name="clusrank"; version="0.5-2"; sha256="168xad5dyz46yxm139q09n9vp1304yrhikxz5bcfzhm3psyv5fbf"; depends=[MASS Rcpp]; }; + clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.0.6"; sha256="0hmj85byw1j1b1crb7nj12wz0rddp5cg21jg1dwg7b0mn5xvy981"; depends=[]; }; clustMD = derive2 { name="clustMD"; version="1.1"; sha256="192li0nx2hwhh5y21xs70vrnzw3wxbzr95f06makaxcrwf4xlp16"; depends=[MASS mclust msm mvtnorm tmvtnorm truncnorm]; }; - clustMixType = derive2 { name="clustMixType"; version="0.1-16"; sha256="1p3i83wrbgs1qpirmmckmpnbbs3p73dl7mh8f724qll761phm8v5"; depends=[]; }; - cluster = derive2 { name="cluster"; version="2.0.3"; sha256="03jfczb3dwg57f164pya0b762xgyswyb9a7s33lw9i0s5dq72ri8"; depends=[]; }; + clustMixType = derive2 { name="clustMixType"; version="0.1-17"; sha256="08drby5ifv8wcww4ns2cma2gyhzwj3x6klvh7fs03wrzn6w78hr0"; depends=[]; }; + clustRcompaR = derive2 { name="clustRcompaR"; version="0.1.0"; sha256="1md1ra18q1iga01q12jyy9va4qyvzlybvbdrdfy2kxhh82w057ww"; depends=[dplyr ggplot2 ppls quanteda tidyr]; }; + cluster = derive2 { name="cluster"; version="2.0.5"; sha256="1bkvqmv8h2c423q9ag2afb6s9j2vcdlxsf559zzbimraphrr2c2b"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; - clusterCrit = derive2 { name="clusterCrit"; version="1.2.6"; sha256="1jy2xxh9i4dsdiqmkl35xpdmq6vyf3alh4d0npzgrwmjl7516pd3"; depends=[]; }; + clusterCrit = derive2 { name="clusterCrit"; version="1.2.7"; sha256="13smdm8dmp4795qqn8an3k22l7xs4i4kgazyjzxdbzkg742akk7q"; depends=[]; }; clusterGeneration = derive2 { name="clusterGeneration"; version="1.3.4"; sha256="1ak8p2sxz3y9scyva7niywyadmppg3yhvn6mwjq7z7cabbcilnbw"; depends=[MASS]; }; clusterGenomics = derive2 { name="clusterGenomics"; version="1.0"; sha256="127hvpg06is4x486g1d5x7dfkrbk7dj35qkds0pggnqxkq3wsc1c"; depends=[]; }; clusterPower = derive2 { name="clusterPower"; version="0.5"; sha256="1g2qpvizyk4q3qlgvar436nrfqxwp5y8yi2y6rch9ak5mbg3yzqb"; depends=[lme4]; }; clusterRepro = derive2 { name="clusterRepro"; version="0.5-1.1"; sha256="0vsf6cq6d51a4w23ph8kdz2h8dfpzyd6i85049p2wakn1kdvkz5p"; depends=[]; }; - clusterSEs = derive2 { name="clusterSEs"; version="2.1"; sha256="1r1cwnx7kdisq6v9ssr0z270yhfkkq3jyg2rq81l43dx7a6yv04y"; depends=[AER Formula lmtest mlogit plm sandwich]; }; - clusterSim = derive2 { name="clusterSim"; version="0.44-2"; sha256="1xf3byri6mwlf89n896bxffmf3c6yqqh992npg9sqznx955hcggv"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; + clusterSEs = derive2 { name="clusterSEs"; version="2.3.2"; sha256="1pxfvmkgx45xp7q2fdd34zd2f0snyq6mazqsd1nqrda7791a494f"; depends=[AER Formula lmtest mlogit plm sandwich]; }; + clusterSim = derive2 { name="clusterSim"; version="0.45-1"; sha256="0wmhsz71rspg98smdp08q3jgdkldqn2l3szwdl70lz93kyls3ivv"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; }; clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; }; + clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; }; + clusternomics = derive2 { name="clusternomics"; version="0.1.0"; sha256="054jbzgz53b1vbv5492zrhywjly8pwiiy4j11qsb20sfz4j951h6"; depends=[magrittr MASS plyr]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; - clustrd = derive2 { name="clustrd"; version="0.1.2"; sha256="022lzp1wvbaa20d8hribgq9miy6i7jxm5m1p3p52h9b7bzga3q6g"; depends=[corpcor e1071 ggplot2 irlba]; }; + clustrd = derive2 { name="clustrd"; version="1.1.0"; sha256="0l1mllgqqlkywhhp1a24hlvsiwkk26k58c9rg9m5pagb623w73p4"; depends=[cluster corpcor dplyr dummies fpc GGally ggplot2 ggrepel plyr]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; clustvarsel = derive2 { name="clustvarsel"; version="2.2"; sha256="1b38y9zn4xbiddm5m5ki307i5yih2nadhnpnsizz91jkcqdnjhw1"; depends=[BMA foreach iterators mclust]; }; clv = derive2 { name="clv"; version="0.3-2.1"; sha256="1qgp2qhblg6ysyrlg0ad169ahwhcyn5pvsqzdlqj700y1k7wl7mc"; depends=[class cluster]; }; cmaes = derive2 { name="cmaes"; version="1.0-11"; sha256="1hwf49d1m660jdngqak9pqasysmpc4jcgr8m04szwbyzyy6xrm5k"; depends=[]; }; - cmaesr = derive2 { name="cmaesr"; version="1.0.1"; sha256="1apka7891agpz2v3smv7m5sa09myjrxq3w3jzj28j2fn4cgfxn47"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; + cmaesr = derive2 { name="cmaesr"; version="1.0.3"; sha256="03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; cmm = derive2 { name="cmm"; version="0.8"; sha256="1661v2lzxgf4s37wdsrnbsvqwppcr7mbp70i1xsysfzki1z6xr19"; depends=[]; }; - cmna = derive2 { name="cmna"; version="0.1.2"; sha256="0iqr4fxjhi243ccb2kbs75pgxr66zlbp5005d5qsvzyn0qxnaa62"; depends=[]; }; + cmna = derive2 { name="cmna"; version="0.3.0"; sha256="0ax27y1h0pz8i5ckjcrbgpav6m1srym6av94bvy02mv26ida0l8c"; depends=[]; }; cmprsk = derive2 { name="cmprsk"; version="2.2-7"; sha256="1imr3wpnj4g57n2x4ryahl4lk8lvq9y2r7319zv3k82mznha8bcm"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.1"; sha256="002s6ls670sdzrxgqv9gbl646b675q1gn6dzkngnf6rgcdqwid7n"; depends=[quantreg survival]; }; cmrutils = derive2 { name="cmrutils"; version="1.3"; sha256="0zjc0bwp2p03hmnj3zjw7800pcdw8b8161y68npyp3hya0s4i9x0"; depends=[chron]; }; - cmsaf = derive2 { name="cmsaf"; version="1.6.1"; sha256="0wsl37i7vwfh1mqrll4ff7qr8wc0mr5f8m6w4r41qihda1bs4y0c"; depends=[fields ncdf4 raster sp]; }; + cmsaf = derive2 { name="cmsaf"; version="1.7.1"; sha256="0q954akb9myb64p7x2zplfljkzqnakx74w93h1n2kfzx7bbh482h"; depends=[fields ncdf4 raster sp]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-3"; sha256="0810kzg78yaxzniq59a4swvdk9qxp37ja52f5n1zssgn0cwz1vk9"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="1.0-3"; sha256="1iy0ispazhib30kh5wp3jziiyf0992nrdklrq80n0w3zhjyi21rh"; depends=[]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; cnmlcd = derive2 { name="cnmlcd"; version="1.0-0"; sha256="0kbq01qrmpn133v18rjphhznpnj8g6dcn1lrbsjykhxkqz086s36"; depends=[lsei]; }; - coala = derive2 { name="coala"; version="0.4.0"; sha256="1ssh0fg4h6v4p4f9184qpwbn8830b9mlvjq73aq67my46sx7i2jh"; depends=[assertthat R6 Rcpp RcppArmadillo rehh scrm]; }; + coRanking = derive2 { name="coRanking"; version="0.1.3"; sha256="1ss00l0c99fi9p6gcimb31nrl5iflps6lvplnjjqwcqjkb2pjh9p"; depends=[Rtsne scatterplot3d]; }; + coala = derive2 { name="coala"; version="0.5.0"; sha256="1yk2cfv73wng1bm00v1xfd208lvc9r7nx1w2rgdgw9m9yv0mw89f"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-3"; sha256="0f1fkpmqq142yrqzbqv11s5q4jkq7dilmrllcns871hc6vah6ikd"; depends=[MCMCpack]; }; - cobs = derive2 { name="cobs"; version="1.3-1"; sha256="18dfc767zfipp4h4q7lgk5yp1c63lb9myc6bg3jkzr1v1xwbhwqk"; depends=[quantreg SparseM]; }; - cocor = derive2 { name="cocor"; version="1.1-2"; sha256="0lkj4rjny2sv4sbvrh159zw66h99rkl1zvncb3g8f17zizmvvfsm"; depends=[]; }; + cobalt = derive2 { name="cobalt"; version="1.3.1"; sha256="00zgq2c3vkrx4q8wp43giwid4778j9wxcjfn3nkbwlgrsswm0adb"; depends=[ggplot2]; }; + cobs = derive2 { name="cobs"; version="1.3-2"; sha256="1kqyh2c0jlb6gbpgwdk0dh5sh6ziw9wyxvxgdk4n4j8d0klb9kx1"; depends=[quantreg SparseM]; }; + cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; + cocoreg = derive2 { name="cocoreg"; version="0.1.0"; sha256="1x6ffwh8z6nj867wxnvq8qjq7rx0j3swdnb12zv917s0y54dwncx"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; }; cocorresp = derive2 { name="cocorresp"; version="0.3-0"; sha256="1r1ssz0cip1gk52nkbr1kpz8gwrg6lwri8ymk41xj2adlsp576v2"; depends=[vegan]; }; cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; }; - coda = derive2 { name="coda"; version="0.18-1"; sha256="03sc780734zj2kqcm8lkyvf76fql0jbfhkblpn8l58zmb6cqi958"; depends=[lattice]; }; + coda = derive2 { name="coda"; version="0.19-1"; sha256="14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl"; depends=[lattice]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; - codep = derive2 { name="codep"; version="0.5-1"; sha256="1ral0f2yb7fa5j216r4hlssijim26q4mr2kdfllf4xn66pssf32y"; depends=[]; }; - codetools = derive2 { name="codetools"; version="0.2-14"; sha256="0y9r4m2b8xgavr89sc179knzwpz54xljbc1dinpq2q07i4xn0397"; depends=[]; }; - codingMatrices = derive2 { name="codingMatrices"; version="0.2.0"; sha256="0gysa26nzrcf9zhlc2vb2banh3yhv53hdbx1an9rjb3rd3n7xh4y"; depends=[fractional Matrix]; }; - codyn = derive2 { name="codyn"; version="1.0.1"; sha256="1r3plblrpdsfx9ng468zjr6imhra5x2xxqivrnw3nmnfiipmik68"; depends=[assertthat]; }; + codep = derive2 { name="codep"; version="0.6-5"; sha256="18da81wja7z9gnn11xiwi7cg43mrj4w2kjkk8s780krbycnfsn5p"; depends=[]; }; + codetools = derive2 { name="codetools"; version="0.2-15"; sha256="0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"; depends=[]; }; + codingMatrices = derive2 { name="codingMatrices"; version="0.2.1"; sha256="00kvvsz1l603v36clsz7jm1yiwl07vcyhv4ghy0pjlz8hcfaqmna"; depends=[fractional Matrix]; }; + codyn = derive2 { name="codyn"; version="1.1.0"; sha256="0s8ssaq59vddilz0fin9sgr8fir70c220cffbsy2l0qn34q48627"; depends=[assertthat permute]; }; coefficientalpha = derive2 { name="coefficientalpha"; version="0.5"; sha256="0pfw64z7f0gp415nn7519rcw829a7wnwnjx94sc55jsvgb1di3kc"; depends=[lavaan rsem]; }; coefplot = derive2 { name="coefplot"; version="1.2.4"; sha256="0phpz4fvvxvpaybp4q1s69qxcpdzj8qxambivncps101mz7jj3sq"; depends=[ggplot2 plyr reshape2 useful]; }; - coenocliner = derive2 { name="coenocliner"; version="0.2-1"; sha256="0y756x8c4psv972wgi6alfn5sd5zybkp2pf68kglcn6w9xd62b0k"; depends=[]; }; - coenoflex = derive2 { name="coenoflex"; version="2.1-0"; sha256="0gh4pr5h3kp5v7bx1gif0j4wj98aqs1wm4mcmv7z7q66c007q50m"; depends=[mgcv]; }; + coenocliner = derive2 { name="coenocliner"; version="0.2-2"; sha256="0r4h0r3av2d1cxmjpwaabjn807626pzqnra2x542wdnnf7h8nmdf"; depends=[]; }; + coenoflex = derive2 { name="coenoflex"; version="2.2-0"; sha256="06f75spl4wkbgicm0bksnid2lb1gkvi05915wn5y4km45d82fkkr"; depends=[mgcv]; }; coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; cofeatureR = derive2 { name="cofeatureR"; version="1.0.1"; sha256="1nxdi97b37pw5xr6cib8hjgziazmy9lfbjgixn9ayacvdhkjs7ib"; depends=[dplyr ggplot2 lazyeval]; }; - coin = derive2 { name="coin"; version="1.1-2"; sha256="0wwkw0sslfp8ass83rh2d9qhzz2p69gv0c6wi778nanjvaj533x5"; depends=[modeltools multcomp mvtnorm survival]; }; + coin = derive2 { name="coin"; version="1.1-3"; sha256="0db000pks4vr5jr765zagd5amqk0l4qxqg67vwwkbj03b71fr24b"; depends=[modeltools multcomp mvtnorm survival]; }; + cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; }; + cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; cold = derive2 { name="cold"; version="1.0-4"; sha256="00rl2h4pirzvgwi28pr94kkn233wvm2z8yyfsz6andbkjsihp6jw"; depends=[]; }; + colf = derive2 { name="colf"; version="0.1.2"; sha256="1xbmc32rp0xlj73krwhqn2ji5xa9kd2anaw88mvi5psdi3d2y1np"; depends=[nlmrt]; }; + collUtils = derive2 { name="collUtils"; version="1.0.5"; sha256="0gbk3lrb2lwq2ixrpcngng6qz6axjb4iyqy5606x1zmjm71c060p"; depends=[Rcpp rJava]; }; coloc = derive2 { name="coloc"; version="2.3-1"; sha256="1j3m9afpkm0bzib38yqvk85b6s6l56s6j2ni96gii4a06r87ig60"; depends=[BMA colorspace MASS]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; + colorSpec = derive2 { name="colorSpec"; version="0.5-3"; sha256="0ffn1x9763xzhfsm5vgkvgpm2a792bqx54ra2x4vda7m78lb6nqr"; depends=[MASS]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; colorfulVennPlot = derive2 { name="colorfulVennPlot"; version="2.4"; sha256="01b3c060fbnap78h9kh21v3zav547ak2crdkvraynpd2096yk51w"; depends=[]; }; colorhcplot = derive2 { name="colorhcplot"; version="1.0"; sha256="1hxh09sg9mdbfz4vx2z9wyx9xs5a82l8sw1wbwaa717a6q3ayjyj"; depends=[]; }; - colorscience = derive2 { name="colorscience"; version="1.0.2"; sha256="0d4bn1s7jmywh528nm3fpra3557v6nxr594q42phw2nq58gscf3z"; depends=[Hmisc munsellinterpol pracma sp]; }; - colorspace = derive2 { name="colorspace"; version="1.2-6"; sha256="0y8n4ljwhbdvkysdwgqzcnpv107pb3px1jip3k6svv86p72nacds"; depends=[]; }; + colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; }; + colorplaner = derive2 { name="colorplaner"; version="0.1.3"; sha256="0mqqk59yjklbc7a0n7jgyhj458622dfdsa1101a5w6kwppbjvnfg"; depends=[digest ggplot2 gtable scales]; }; + colorr = derive2 { name="colorr"; version="1.0.0"; sha256="1wwrgb9fc9gzxxwxrdrkwwrmhqqllv29wr4q8y1shj9d3nzcpwmh"; depends=[]; }; + colorscience = derive2 { name="colorscience"; version="1.0.4"; sha256="19943gnzszh13mg74clbkhbc6xg4259ilqk19mrv8d6ml6f6wspl"; depends=[Hmisc munsellinterpol pracma sp]; }; + colorspace = derive2 { name="colorspace"; version="1.3-2"; sha256="0d1ya7hx4y58n5ivwmdmq2zgh0g2sbv7ykh13n85c1355csd57yx"; depends=[]; }; colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; - colourlovers = derive2 { name="colourlovers"; version="0.2.0"; sha256="17macf5nby286n80pfsha54r3q3idpfhkm2w1c8hbsh2rxfh6r1d"; depends=[jsonlite png XML]; }; + colourlovers = derive2 { name="colourlovers"; version="0.2.2"; sha256="0fgxs73l4g1lnmc2q613ykxxrbmvq6w66zpidccqg64wa9cy5yhm"; depends=[jsonlite png XML]; }; + colourpicker = derive2 { name="colourpicker"; version="0.3"; sha256="0sxxllfwdbdc283nk9b82xrvb6xali14c6qfywm2qck0k8jh7ppy"; depends=[ggplot2 htmltools htmlwidgets miniUI shiny shinyjs]; }; + colourvision = derive2 { name="colourvision"; version="0.1"; sha256="1v9qipx1rglga0mdw97xbdbq1mgx7avif7a6gi1xh9gvw408x25c"; depends=[rgl]; }; + colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; comato = derive2 { name="comato"; version="1.0"; sha256="03jnvv0sczy13r81aljhj9kv09sl5hrs0n5bn3pdi7ba64zgbjiw"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; + combiter = derive2 { name="combiter"; version="0.1.0"; sha256="1wzrz2wc4j4inn078id6jr1585pl62r8ym8cc3vmg4acq2klm93c"; depends=[iterators itertools Rcpp]; }; comclim = derive2 { name="comclim"; version="0.9.4"; sha256="0m6ynccscsrrq70p0drwrwxp4skc630kv1l5smh48pi8kagahj1g"; depends=[]; }; cometExactTest = derive2 { name="cometExactTest"; version="0.1.3"; sha256="08ck1cv5apzn379j6mm2gmhm4qj18418crmqbbp46d80waf0ghxq"; depends=[dplyr]; }; - comf = derive2 { name="comf"; version="0.1.1"; sha256="0ynqyfzj9nnslyi5h4mciyrk8mlf0zg1j9z6liqjld4f2c1zm0al"; depends=[]; }; + comf = derive2 { name="comf"; version="0.1.6"; sha256="1dfba8i08gc319ybqhfs96wa2mp0ndh4rrkv9i432gc56p4kgapr"; depends=[plyr]; }; commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; }; commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; - commonmark = derive2 { name="commonmark"; version="0.7"; sha256="11a6v8dsrhb2c5ydy6qsvdhn9vwjm4q8y9wjmbp6sc6zngfqqk6a"; depends=[]; }; + commonmark = derive2 { name="commonmark"; version="1.1"; sha256="0dh56cspy8wkvbz0602vp050qxd70wm063lqflfk2zddcrv9lhc2"; depends=[]; }; compHclust = derive2 { name="compHclust"; version="1.0-2"; sha256="1h39krvz516xwsvn5987i1zbzan8vx2411qz6dad112hpss0vyk9"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; - compareDF = derive2 { name="compareDF"; version="1.0.0"; sha256="1dxqj3zd8a7261q1692sj11gxnizd82wgc24j73b94xkfk0iiv74"; depends=[dplyr tidyr]; }; - compareGroups = derive2 { name="compareGroups"; version="3.2"; sha256="0p4xaxjxyld5a0i0z1bzrbqz9zzlk0pz0qy0pkpfcq4czpyfv4sz"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; + compareDF = derive2 { name="compareDF"; version="1.1.0"; sha256="1597xmq857jf4b67k7y869gbflad89rxfvrq8m0gp1wd21wv8z1h"; depends=[dplyr htmlTable tidyr]; }; + compareGroups = derive2 { name="compareGroups"; version="3.2.3"; sha256="0sliphw8yxx93qaf6pk405rqbfnpixjx8yazzjqiird6bm746i9n"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; comparison = derive2 { name="comparison"; version="1.0-4"; sha256="0pc462rhk8gr8zrf08ksi315kmhydlp027q5gd40ap5mmhk7rd82"; depends=[isotone]; }; compeir = derive2 { name="compeir"; version="1.0"; sha256="1bb5459wcqpjic2b9kjn0l0qdn7sqmmx34hdb2aqg80q22mhx5dv"; depends=[etm lattice]; }; compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; }; + compete = derive2 { name="compete"; version="0.1"; sha256="1b1320jw8pcnjkzb0lr8j6d3z7yhlq31gszd79wdcmwnpzap9k0z"; depends=[igraph sna]; }; + complexity = derive2 { name="complexity"; version="1.0.0"; sha256="15wdlrc8ng1zxgp3gi8d1zfy366mv9m4p643ia7vdcgqv3icq7fc"; depends=[combinat]; }; + complexplus = derive2 { name="complexplus"; version="2.0"; sha256="05b36gql6fqcairwpxvis9vllpvmpgv6rg69zd8vabl5xsgv8q44"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.6.1"; sha256="1dr80r1p05h3mlnjbgh6kfw86np8y2bhy9yi5qydv85w52k133n1"; depends=[boot ggplot2 robustbase scales]; }; compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; compositions = derive2 { name="compositions"; version="1.40-1"; sha256="1hn139g86bc1q3dj6kj9f21042v4x0xgrp4ni1zvx1zx8xmy3h8b"; depends=[bayesm energy robustbase tensorA]; }; - compound_Cox = derive2 { name="compound.Cox"; version="2.0"; sha256="1mid09h3xp7p33g371gbghr665qnny1rvi20ha8rv04d928l2r7a"; depends=[numDeriv survival]; }; + compound_Cox = derive2 { name="compound.Cox"; version="3.2"; sha256="028mpal6gdrxgw08hxhsl4yvc9plj0bvndb48fyrzpj8kmk5dibv"; depends=[numDeriv survival]; }; compute_es = derive2 { name="compute.es"; version="0.2-4"; sha256="1b5i8z66zbag0vdv98mmpwmizpm68vc3ajh0n3q94zdcmhcbx12d"; depends=[]; }; + concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; + conclust = derive2 { name="conclust"; version="1.1"; sha256="1k9y1mniy7s51dmm5ia693k72s2vxk5bznxxf74s7mx9n3mg2i8r"; depends=[]; }; concor = derive2 { name="concor"; version="1.0-0.1"; sha256="0hjyvi6p16cyrmq0bq7fph1r5f3adp7zpf123wkm5bkjnc5122k0"; depends=[]; }; concordance = derive2 { name="concordance"; version="1.6"; sha256="0pb4mndrh1nimf59ajjcydlvc79nm6p7c219iymkn0b1hbrnx7lf"; depends=[]; }; - concreg = derive2 { name="concreg"; version="0.5"; sha256="0psvnirl5rqicyzxs9sivh23bzzwdgviqczdl2in2gnrvdiw7m6f"; depends=[survival]; }; + concreg = derive2 { name="concreg"; version="0.6"; sha256="1ncs9cpviv5kd49hahlhi7wn2yk70msi22qv8fw91hf81ccimlp2"; depends=[survival]; }; cond = derive2 { name="cond"; version="1.2-3"; sha256="0y7m7valk7zn40y62348czmdvfkx59il9sl6wy565lzqfiimd9ps"; depends=[statmod survival]; }; condGEE = derive2 { name="condGEE"; version="0.1-4"; sha256="0mqj2pc91n8h3arpd4b9f7ndbcnai21c67is22qg22wj7vhhs87h"; depends=[numDeriv rootSolve]; }; condMVNorm = derive2 { name="condMVNorm"; version="2015.2-1"; sha256="04563jljnjhbiaiq33gn5dxjfvv05xp3lhl3w942v0smy0cdhrh4"; depends=[mvtnorm]; }; - condformat = derive2 { name="condformat"; version="0.2.0"; sha256="07d79l0m6cbvxrj0p8fi8v7blpapanl7hzhkvg4npyz2xjvy6bjk"; depends=[assertthat dplyr htmlTable knitr lazyeval scales]; }; + condSURV = derive2 { name="condSURV"; version="2.0.1"; sha256="0xjpypc4fzrnfjcznyc2bslkkza4fib8nx8ff2j7xh2nf84lk3f1"; depends=[doParallel doRNG foreach KernSmooth np survival]; }; + condformat = derive2 { name="condformat"; version="0.5.0"; sha256="0cxayvw5is3b2bwfyjd2465q45dx1w1dqhaa10gld0b2336i7hkz"; depends=[dplyr gplots htmlTable knitr lazyeval rmarkdown scales]; }; + condir = derive2 { name="condir"; version="0.1.1"; sha256="133598h1ga4jyr77lchnby6m8bh3adq6s38cgw45q4fyvzad4qds"; depends=[BayesFactor effsize knitr psych shiny xtable]; }; + conditions = derive2 { name="conditions"; version="0.1"; sha256="0vhqkbsil3qfvrz7924i3wvjknw69cp27g7ayapf6w94bbggx4x8"; depends=[]; }; condmixt = derive2 { name="condmixt"; version="1.0"; sha256="05q1fj7akf6lsq9rbcqqkzlx82jvk6mlvmwx6jzk8j228fwqmg90"; depends=[evd]; }; - condvis = derive2 { name="condvis"; version="0.2-1"; sha256="1gbfzgim9dp79244m2550slgd365aafmcy75klh4z32s6dl4rnvd"; depends=[MASS]; }; - coneproj = derive2 { name="coneproj"; version="1.9"; sha256="17qwix8k7agbxs8g4psyivlr4w4k8v2w0qfhs8a4vsg28z88kr6d"; depends=[Rcpp RcppArmadillo]; }; + condvis = derive2 { name="condvis"; version="0.4-1"; sha256="1fqwybfw5sv4g8kg1yk41ixm5bmzcx7dry1a7ijca5wakchghvya"; depends=[MASS]; }; + coneproj = derive2 { name="coneproj"; version="1.11"; sha256="11hz6xk7b53c1j2c1l0j8c3gh310b59nhr6ln0vibfp30dzxq7xq"; depends=[Rcpp RcppArmadillo]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; + confSAM = derive2 { name="confSAM"; version="0.1"; sha256="00l4hk0n63p3gdv6hpxqkkn3nw4rgw77rpwzn2k8fgq53ja44yfg"; depends=[]; }; confidence = derive2 { name="confidence"; version="1.1-0"; sha256="11y2mjh9ykmsgf6km6f2w5rql1vqwick4jzmxg5gkfkiisvsq1cp"; depends=[ggplot2 knitr markdown plyr xtable]; }; + config = derive2 { name="config"; version="0.2"; sha256="1p0gaqrqhcrdkp5cr3rn4i5ny8mr96b3q1fwgs0i8lk5riljkk20"; depends=[yaml]; }; + configr = derive2 { name="configr"; version="0.1.0"; sha256="0yajq3c9j22p3llkhla2x6mmphmpi4l1wshyyn1sv1fczldijvzc"; depends=[ini jsonlite RcppTOML yaml]; }; conformal = derive2 { name="conformal"; version="0.2"; sha256="13d8yv8l333n3m8kl2sdnd0m5b7gjixkqjlpfj312fk9nxvqdbcg"; depends=[caret e1071 ggplot2 randomForest]; }; - confreq = derive2 { name="confreq"; version="1.4"; sha256="0cbhisw3yhg71081a2f40jgbdjcvx36xrrnbhwcyhxd43qn2dp0q"; depends=[gmp]; }; + confreq = derive2 { name="confreq"; version="1.5.1"; sha256="0gy6d1kffb1w86ifldswb9krxyc2p646g9yjlfm1h243qlp52sfa"; depends=[gmp]; }; conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; conjoint = derive2 { name="conjoint"; version="1.39"; sha256="0f8fwf419js9c292i3ac89rlrwxs2idhwxml1qd8xd2ggwfh6w5m"; depends=[AlgDesign clusterSim]; }; connect3 = derive2 { name="connect3"; version="0.1.0"; sha256="07ih875ynrxzynj989d0h469ilq6c634z2z3igvxpkx40wr451d5"; depends=[]; }; - conover_test = derive2 { name="conover.test"; version="1.1.1"; sha256="0dvxrm1hqzlkzhmp3p6qackjpwwvl812h63skwqiwh70sc7xifd0"; depends=[]; }; + conover_test = derive2 { name="conover.test"; version="1.1.2"; sha256="063a43v6f8hknaph78b92aqhwv6nfzsd029j4gqs2087lyqdk2ap"; depends=[]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; - contfrac = derive2 { name="contfrac"; version="1.1-9"; sha256="16yl96bmr16a18qfz6y5zf7p02ky1jy2iimcb1wp50g7imlcq840"; depends=[]; }; - conting = derive2 { name="conting"; version="1.5"; sha256="02vkpzdcwsny40jdcxgjfrx89lw1gq864s3fgswa9bfxfps9p58h"; depends=[BMS coda gtools mvtnorm tseries]; }; + contfrac = derive2 { name="contfrac"; version="1.1-10"; sha256="10mw75aznwbhi4kj8s7hyisgxnb4rv8pggcs8zdbmq22w7ql2rd7"; depends=[]; }; + conting = derive2 { name="conting"; version="1.6"; sha256="0hyg1nj89i780mf1fgmrfiv5gl5nzlar8i1zy8fsim73cw9y39fm"; depends=[BMS coda gtools mvtnorm tseries]; }; contoureR = derive2 { name="contoureR"; version="1.0.5"; sha256="1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn"; depends=[geometry plyr Rcpp reshape]; }; - contrast = derive2 { name="contrast"; version="0.19"; sha256="1kc3scz3msa52lplc79mmn4z99kq1p2vlb18wqxa9q2ma133x6pl"; depends=[rms]; }; + contrast = derive2 { name="contrast"; version="0.21"; sha256="1fgm6qm3svqg8ryq2kd1h9z6f3ni8kki7gl3izvjw6wir97ph8nw"; depends=[geepack Hmisc MASS nlme rms sandwich]; }; controlTest = derive2 { name="controlTest"; version="1.0"; sha256="0gzhd92qy3dykwdfwckw6x46bd9m044hcn4bqwpv16af1xbrj963"; depends=[survival]; }; + convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; + convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; convevol = derive2 { name="convevol"; version="1.0"; sha256="05nhpndixvrmiq5paswj7qwsq3k3al34q3j751bic4kb8zhby3fk"; depends=[ape cluster geiger MASS phytools]; }; - convoSPAT = derive2 { name="convoSPAT"; version="1.0"; sha256="0awax173csyj705nh48nfk1f4w00yjkm00xfglkphccpny1bkqyq"; depends=[ellipse fields geoR MASS plotrix StatMatch]; }; + convey = derive2 { name="convey"; version="0.1.0"; sha256="0qv8v5mfnzgyyiyx2yhmkmqscnf1q8i2p2hvhhx5y1ix045an93x"; depends=[survey]; }; + convoSPAT = derive2 { name="convoSPAT"; version="1.1.1"; sha256="17j5a5nppslx2rwg2grdz8ihhy0ryjlhrqar1yq7jknmrss3jlpv"; depends=[ellipse fields geoR MASS plotrix StatMatch]; }; cooccur = derive2 { name="cooccur"; version="1.3"; sha256="1wlaghhi4f3v8kzwhcgq3c6as7v3zlpkzhb232qz1amr7f0058kv"; depends=[ggplot2 gmp reshape2]; }; - coop = derive2 { name="coop"; version="0.3-0"; sha256="0mcxfhik6dd8knlnf9m34gf9ili6i3n9wq752dy66mx1z59kcvl6"; depends=[]; }; + cooccurNet = derive2 { name="cooccurNet"; version="0.1.6"; sha256="1vqfmvjrxxn977jrry47wn4lag4yi4bkyxwlis3n1ly39kkmyh2j"; depends=[bigmemory doParallel foreach igraph knitr Matrix pryr seqinr]; }; + coop = derive2 { name="coop"; version="0.6-0"; sha256="1q38kawck0625fyxmh7a0cya5yyhv9ds53q1l0h03vrappq5amxv"; depends=[]; }; cooptrees = derive2 { name="cooptrees"; version="1.0"; sha256="0izvwna1jsqik3v5fz1r4c86irvma42clw0p4rdvwswv5pk698i1"; depends=[gtools igraph optrees]; }; - copBasic = derive2 { name="copBasic"; version="2.0.1"; sha256="1jmjyz70hw8sbihxf74ir6sxrlcxwv0c1fhw1ph0raasbyxrxml6"; depends=[lmomco]; }; - copCAR = derive2 { name="copCAR"; version="1.0-1"; sha256="173jv69n4g68yfrz03sg23qzlyvvlw988axgj5knq3l2cq6pjpb2"; depends=[numDeriv Rcpp RcppArmadillo spam]; }; - cope = derive2 { name="cope"; version="0.1"; sha256="1g00dzy99m4212wrkhmqf8ibmilhp75hd2yv7yfzi28nr5jgir3m"; depends=[fields maps MASS mvtnorm]; }; - copula = derive2 { name="copula"; version="0.999-14"; sha256="08mas18knyz3laxrg9hx9i6rwhmksyi43wni2ydlrlp2cflq4ipz"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm pspline stabledist]; }; + copBasic = derive2 { name="copBasic"; version="2.0.4"; sha256="0vc1rk0njcmd501jpsrpgqzrcqyplnycfaidn9qwns84cswx0hxs"; depends=[lmomco randtoolbox]; }; + copCAR = derive2 { name="copCAR"; version="2.0-1"; sha256="1mvbarzq409lkf7sd6s4adf2cgvmby7f1yg35x83bp1sc8529kz8"; depends=[mcmcse numDeriv Rcpp RcppArmadillo spam]; }; + cope = derive2 { name="cope"; version="0.2.3"; sha256="1r02nb6wy25ixhdcbqqz167s7ny3hydpxfxry5ar4136qvcamgyy"; depends=[abind fields maps MASS Matrix mvtnorm nlme]; }; + coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; + copula = derive2 { name="copula"; version="0.999-16"; sha256="0mnhp5jhrbynnkdf9cmxzd5kqg8zvdrwldy8pn7sdjq18xq6qawa"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaedas = derive2 { name="copulaedas"; version="1.4.2"; sha256="09w6b1m1lnlnsx0qp2mzlp0z9rxzz90qs9jqzwwjl56lzdad3vpr"; depends=[copula mvtnorm truncnorm vines]; }; - corHMM = derive2 { name="corHMM"; version="1.18"; sha256="1x1hrhb10rln4jhx03gx5ap1qbdk2xcknlnr3xmb6aawqsx0h4cq"; depends=[ape corpcor expm GenSA nloptr numDeriv phangorn]; }; + corHMM = derive2 { name="corHMM"; version="1.20"; sha256="1amfy419m8y9w6swa1avvjdyk2rjymsa280qsdy9zbq0izrgf9dr"; depends=[ape corpcor expm GenSA nloptr numDeriv phangorn]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; }; corcounts = derive2 { name="corcounts"; version="1.4"; sha256="0irlx62ql5rp5s7nnjdy6jh723wl4039wn10zxri8ihxwqsyyz3f"; depends=[]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; - coreNLP = derive2 { name="coreNLP"; version="0.4-1"; sha256="0a6pc588ddi9qyi5gsnzzvm4k0p5sp5bnjrlsskaymzdq4rp6miz"; depends=[plotrix rJava XML]; }; + coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; + coreSim = derive2 { name="coreSim"; version="0.2.3"; sha256="00hrhiml3g0jld6pllpgjfrlpm2lqcdb01l6k9gkjyh3lab827fg"; depends=[dplyr MASS]; }; coreTDT = derive2 { name="coreTDT"; version="1.0"; sha256="14rnh61gk3m6g8rq77hm9ybds0px15di2mxm3jiyfdfynx5ng58f"; depends=[]; }; + corehunter = derive2 { name="corehunter"; version="3.1.0"; sha256="1q5bmzkmm8fzdnbj8s8mi0jxmrqp6ps14m1fm0c3frlqj3fy1ngm"; depends=[naturalsort rJava]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; + corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; corpcor = derive2 { name="corpcor"; version="1.6.8"; sha256="0gnwqzfhxhxy7zxjzgga9l2npn588jjavqlmv9dag7ciq1kxmzk9"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.4-3"; sha256="0zh8mabfy9yqgx7asi4yqv4c0kj59yvyxxaxjgdjy5kkr17zd4g4"; depends=[]; }; + corr2D = derive2 { name="corr2D"; version="0.1.12"; sha256="06jhcb4sr9mz06pc8jjrpl1qhxjp4bacal3hgy1k76lfbayxn7fv"; depends=[colorspace doParallel fields foreach mmand rgl]; }; + correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="0.1.4"; sha256="09gkxl5bmshsg8j9manvpwzy88djqqi8xrdhbmq6azk3g3lr70rp"; depends=[ellipse gplots rgl]; }; - corrgram = derive2 { name="corrgram"; version="1.8"; sha256="0myaf0j2sa895xiczhn6r97j988jxc1bv8wnh9cw2ppxzxqly4rg"; depends=[seriation]; }; - corrplot = derive2 { name="corrplot"; version="0.73"; sha256="0xnlkb8lhdjcc10drym9ymqzvfwa3kvf955y0k66z5jvabzyjkck"; depends=[]; }; + corrgram = derive2 { name="corrgram"; version="1.10"; sha256="065l93pdz3bms1b9qkcqhyi0j2bh4firl35rnfkajqbz5i3v8q55"; depends=[seriation]; }; + corrplot = derive2 { name="corrplot"; version="0.77"; sha256="1lr873lqg4zdjccf9g8a1fbvvdbvyb30j980ygiyxwpajpwnzdjl"; depends=[]; }; + corrr = derive2 { name="corrr"; version="0.2.1"; sha256="1d04nk92fjmk4kc5zipjqjhhmb1w97kid7l2jz5a8pkwiccn5byc"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr seriation tibble tidyr]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; cosmoFns = derive2 { name="cosmoFns"; version="1.0-1"; sha256="0a6xhbgxxnymlvicg99yhgny2lscxcbmvqmy17kxmahdi797dsg6"; depends=[]; }; - cosmosR = derive2 { name="cosmosR"; version="1.0"; sha256="0w4qywnkgcybgyyhnvvg33amqi2vnkry6iajakyqr1x2hzfpf9sv"; depends=[xlsx]; }; cosso = derive2 { name="cosso"; version="2.1-1"; sha256="1wyq27qak0kz4bbzynm24r5ksvb6ddd43h2ykh6m935xck16blyb"; depends=[glmnet quadprog Rglpk]; }; costat = derive2 { name="costat"; version="2.3"; sha256="1kqyl89lx1amap9zgrfy1bqnl93kahrksj6yms44yrxr1as2g4nk"; depends=[wavethresh]; }; cotrend = derive2 { name="cotrend"; version="1.0"; sha256="0h0y502wqq83wlf9ab1b9rxg1wycvi3sp4lbqfpvy46vgljrjw87"; depends=[xts]; }; - couchDB = derive2 { name="couchDB"; version="1.3.0"; sha256="153zxi2liv932r7mphhzgxw4wyizh5iyk62ad6x64av31kd2qzsn"; depends=[bitops httr RCurl rjson]; }; - countrycode = derive2 { name="countrycode"; version="0.18"; sha256="1by3xws2c43ryz4fnlq85yvgnwnvzmvjbd18cafirlwpl6liy2ic"; depends=[]; }; + couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; + countrycode = derive2 { name="countrycode"; version="0.19"; sha256="0cgv8sds01figs5dsm1gga2py2nzf3a3xrlkmblal52xxpng2jf8"; depends=[]; }; + countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; + countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; }; covBM = derive2 { name="covBM"; version="0.1.0"; sha256="0ky1lhr8m4hy2ss1nr2xymf6cmj1rr8px8zsxna6bsisf5bq4j4w"; depends=[nlme]; }; covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; }; covRobust = derive2 { name="covRobust"; version="1.1-0"; sha256="1nvy5cqs4g565qj2hhgk5spr58ps2bhas3i752rf7wvrskb89fk7"; depends=[]; }; covTest = derive2 { name="covTest"; version="1.02"; sha256="0p4di8bdjghsq5jd678dprlhiwnxr5piqlx2z7hi2bjjpvvl5657"; depends=[glmnet glmpath lars MASS]; }; - covafillr = derive2 { name="covafillr"; version="0.2.1"; sha256="1mn7jnhimp1bspsl8rq8br8z4r2nb7izbvykbzz5zpmgg2204pl5"; depends=[RcppEigen]; }; + covafillr = derive2 { name="covafillr"; version="0.4.0"; sha256="0q6zzgpgwzmdwpz9lzhprhyy9nsrzwk35g35ighayd8d6c7ih44f"; depends=[ggplot2 RcppEigen]; }; covmat = derive2 { name="covmat"; version="1.0"; sha256="00y966897x83v471yarfikpr794b7adhgn5c9hgh0j1j4yfdc3b8"; depends=[DEoptim doParallel fGarch foreach ggplot2 gridExtra lhs Matrix mvtnorm optimx reshape2 RMTstat robust robustbase scales VIM xts zoo]; }; - covr = derive2 { name="covr"; version="1.2.0"; sha256="1gavcqqbg211sv52sicrh87vif71dl6n9xfcb6b3giqw897w7vrc"; depends=[crayon devtools htmltools httr jsonlite rex]; }; + covr = derive2 { name="covr"; version="2.2.2"; sha256="0bx2fjaxqigiic2fndpn1y0whag6b2j733dn1cq4qd601sfca1w3"; depends=[crayon httr jsonlite rex withr]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; - cowplot = derive2 { name="cowplot"; version="0.6.1"; sha256="1lfqs19l0xs87lnm06f8cy1vkl8hhmwp1g6zl9k1ar60h7kg0y4l"; depends=[ggplot2 gtable plyr]; }; - cowsay = derive2 { name="cowsay"; version="0.4.0"; sha256="0lbamjvngj1s0jv8ybbfddx52yqf3h7zkjixl9qr0ha8xkidg7r3"; depends=[fortunes]; }; + covsep = derive2 { name="covsep"; version="1.0.0"; sha256="1i6ygzzf2s0f7a42q2pb1v0gn369wxdyxvbk4k891irq352sf18r"; depends=[mvtnorm]; }; + cowplot = derive2 { name="cowplot"; version="0.7.0"; sha256="03iimcsh1pk7iqzjdlfcj43b8khijdk4hg00j4jdllv19xsfb0hx"; depends=[ggplot2 gtable plyr]; }; + cowsay = derive2 { name="cowsay"; version="0.5.0"; sha256="16rlpyfiwk2f04p49inf5m3pb5nvb45xs6sdfjszihm1hxl09x7x"; depends=[fortunes rmsfact]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-5"; sha256="0lpdwpvsgjgmbf55qqhflw4q40xmqm422inkssgn3ladcp68gb1s"; depends=[bdsmatrix Matrix nlme survival]; }; - coxphf = derive2 { name="coxphf"; version="1.11"; sha256="0494szmhc7qp1qynrqf3kmna26h4ams40qr6w7qj4al54mkp0346"; depends=[survival]; }; - coxphw = derive2 { name="coxphw"; version="3.0.0"; sha256="11pyd09dwkbixjz1riv8rz3jrp1ix6cbn1fw9nm8vnrc19x5lkz5"; depends=[survival]; }; + coxphf = derive2 { name="coxphf"; version="1.12"; sha256="0vsdpbpc18fm6dwiqjwclgimwng34xqzy2mqbcijs6p7h1j124a0"; depends=[survival]; }; + coxphw = derive2 { name="coxphw"; version="4.0.0"; sha256="02xiwrvc3gbwwjcz9kwy2g91jrjpawch5r4pq6l4lyvl556w296l"; depends=[survival]; }; coxrobust = derive2 { name="coxrobust"; version="1.0"; sha256="08hp0fz5gfxgs3ipglj6qfr6v63kzxkrzg650bmzabq8dvrxd97q"; depends=[survival]; }; coxsei = derive2 { name="coxsei"; version="0.1"; sha256="1agr0gmyy1f2x6yspj04skgpi1drpbc1fcbwhhhjsz1j6c64xagy"; depends=[]; }; - cp4p = derive2 { name="cp4p"; version="0.3.4"; sha256="03g4fn7ih6nmi9xsn7b10ljfdmcv8svyiwcpd5l3yzl3ylbwf2gh"; depends=[limma MESS multtest qvalue]; }; + cp4p = derive2 { name="cp4p"; version="0.3.5"; sha256="16pkl0brm415v153ln41nyy13fsp4i0jy8349lsffkv5mvp7vklc"; depends=[limma MESS multtest qvalue]; }; cpa = derive2 { name="cpa"; version="1.0"; sha256="14kcxayw4cdbjfa6bvfzqp8flwc0sr3hmh2dnr1dfax0hnccd71m"; depends=[]; }; cpca = derive2 { name="cpca"; version="0.1.2"; sha256="1pccsjahb1qynnxa0akhfpcmhfmdg4rd1s6pfqrdl7bwbcmq4lqf"; depends=[]; }; cpgen = derive2 { name="cpgen"; version="0.1"; sha256="1cp3d6riy65lc1mfrxh92lc6f1qal7amhjilfzz0r529j5fipd2v"; depends=[Matrix pedigreemm Rcpp RcppEigen RcppProgress]; }; cpk = derive2 { name="cpk"; version="1.3-1"; sha256="1njmk2w6zbp6j373v5nd1b6b8ni4slgzpf9qxn5wnqlws8801n73"; depends=[]; }; - cplexAPI = derive2 { name="cplexAPI"; version="1.3.1"; sha256="0idh2fjc6lkpk24d476rsgn2w7nskiclbbfy1pwh8m49wj70h4ix"; depends=[]; }; - cplm = derive2 { name="cplm"; version="0.7-4"; sha256="156w3yiazx79133rmxmgz9v4im8g7h37fj4gq5ymy5255ws07m8m"; depends=[biglm coda ggplot2 Matrix minqa nlme reshape2 statmod tweedie]; }; + cplexAPI = derive2 { name="cplexAPI"; version="1.3.3"; sha256="1li5sbakkq8hrgwsa4i1qa5bdjj6vm6s9sq23ccknbb8bxp4zmwv"; depends=[]; }; + cplm = derive2 { name="cplm"; version="0.7-5"; sha256="16li79x2zyydi7gi4n8k09g9x2n1dgd9av3nqjnb0by3v31c44n0"; depends=[biglm coda ggplot2 Matrix minqa nlme reshape2 statmod tweedie]; }; cpm = derive2 { name="cpm"; version="2.2"; sha256="1n1iqhalp99mbh8jha0pv759fb97sqxdiiq9bxy3wm6aqmssvdb1"; depends=[]; }; cqrReg = derive2 { name="cqrReg"; version="1.2"; sha256="1sn8pkbqb058lbysdf2y1s734351a91kwbanplyzv3makbbdm4ca"; depends=[quantreg Rcpp RcppArmadillo]; }; cquad = derive2 { name="cquad"; version="1.3"; sha256="1r6g3yp3vvm8d5351lan4im1bmir38d4l9cf8bw0ay7as33ny3x9"; depends=[MASS plm]; }; crackR = derive2 { name="crackR"; version="0.3-9"; sha256="18fr3d6ywcvmdbisqbrbqsr92v33paigxfbslcxf7pk26nzn2lly"; depends=[evd Hmisc]; }; cramer = derive2 { name="cramer"; version="0.9-1"; sha256="1dlapmqizff911v3jv8064ddg8viw28nq05hs77y5p4pi36gpyw4"; depends=[boot]; }; - crandatapkgs = derive2 { name="crandatapkgs"; version="0.1.3"; sha256="0yz16ilmy0cilsb9f61bs3y48xi614i4l5qw6fh8hinsqnhzyv0l"; depends=[]; }; + crandatapkgs = derive2 { name="crandatapkgs"; version="0.1.5"; sha256="113apslycwdgyx18gxbamz235267h2v9b4r2d3pakw38sh74z3qz"; depends=[]; }; crank = derive2 { name="crank"; version="1.1"; sha256="117sgq7zm5wxmd97sfc927qq70snra6vd090mhpcsdhipw1py6zc"; depends=[]; }; cranlogs = derive2 { name="cranlogs"; version="2.1.0"; sha256="1w1nbifjb9l106fk97zy0w73x73bw5azq89l3c1b8r2fz8aljkkc"; depends=[httr jsonlite]; }; crantastic = derive2 { name="crantastic"; version="0.1"; sha256="0y2w9g100llnyw2qwjrib17k2r2q9yws77mf6999c93r8ygzn4f5"; depends=[]; }; - crawl = derive2 { name="crawl"; version="2.0"; sha256="1brk2xpa623x58rf98bkyq1fqz0mqavg55pj2xifs481iz70w294"; depends=[mvtnorm Rcpp RcppArmadillo shiny]; }; - crayon = derive2 { name="crayon"; version="1.3.1"; sha256="0d38fm06h272a8iqlc0d45m2rh36giwqw7mwq4z8hkp4vs975fmm"; depends=[memoise]; }; + crawl = derive2 { name="crawl"; version="2.0.1"; sha256="0jmkbcpf681v00z7p36cni5wrh0y3mbxjia6bnajqjpaqdqzz8la"; depends=[mvtnorm Rcpp RcppArmadillo shiny]; }; + crayon = derive2 { name="crayon"; version="1.3.2"; sha256="0s2yam18slph7xsw4pyc9f92gdyf609r5w92yax69zh57kb7asws"; depends=[]; }; crblocks = derive2 { name="crblocks"; version="0.9-1"; sha256="1m6yy6jb1dld7m9jaasms5ps8sn3v039jvlk8b0c08hmm7y0rm3z"; depends=[]; }; - crch = derive2 { name="crch"; version="0.9-2"; sha256="0i3gli7l4p4xmwq7xzalpq2l140wj36wbggwh3k3jbn0avxpbi56"; depends=[Formula ordinal]; }; + crch = derive2 { name="crch"; version="1.0-0"; sha256="1wd9hwr68qlinaw23lckjizq5g67v74wc3v6ig1rxrxyssyzag68"; depends=[Formula ordinal]; }; creditr = derive2 { name="creditr"; version="0.6.1"; sha256="1dhjl99gjc97bdsdg29mq6xifivjn9kr0y7m2jzvrzb26x856z97"; depends=[devtools quantmod Rcpp RCurl XML xts zoo]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; - cricketr = derive2 { name="cricketr"; version="0.0.12"; sha256="0v6g3kkf9a8qvmfis1xdhja5j1impmi6mm5dmlq04s8qj4khnnqi"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; + cricketr = derive2 { name="cricketr"; version="0.0.13"; sha256="1nj72avz1m12nn3kyiy4msrvrwhdxl0mywc22wwc6j9dq7v7gh18"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; crimCV = derive2 { name="crimCV"; version="0.9.3"; sha256="1p2cma78fb9a2ckmwdvpb6fc0818xw2mvq565dgiimgkdmmr0iid"; depends=[]; }; crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; - crmPack = derive2 { name="crmPack"; version="0.1.9"; sha256="0kr2vqmi4bk5dmbi44xvg3rqnfmhj69qcqwbll0qqxd5x36jpkbq"; depends=[BayesLogit GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; + crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; + crmPack = derive2 { name="crmPack"; version="0.2.0"; sha256="1bgy3bfsasjppd0gf9yxrfyc1glzqpgdfpl9kv2lv34xbywwad05"; depends=[BayesLogit GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; }; crossReg = derive2 { name="crossReg"; version="1.0"; sha256="1866jhfnksv9rk89vw7w4gaxi76bxfjvqxx7cfa8nlrcsmaqd7rf"; depends=[]; }; crossdes = derive2 { name="crossdes"; version="1.1-1"; sha256="1d7lv3ibq1rwxx8kc3ia6l9dbz2dxdd5pnf2vhhjmwm448iamcfd"; depends=[AlgDesign gtools]; }; crossmatch = derive2 { name="crossmatch"; version="1.3-1"; sha256="082lrv2129mfhwlh99z3g8id3a29s8854skl152bl3ig8pk2gbjz"; depends=[nbpMatching survival]; }; + crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; - crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.1"; sha256="0l2fwdawfbx7971q7jg7604w2ys056rfywiw0myfgc0z864saz0n"; depends=[MASS]; }; + crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; }; crqa = derive2 { name="crqa"; version="1.0.6"; sha256="1v9fwl98jjlg2z5skqsjmmgpmmxy4g1gzvc28yflvdp50qn509v8"; depends=[fields Matrix plot3D pracma tseriesChaos]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; crs = derive2 { name="crs"; version="0.15-24"; sha256="08k8vim4n85ll16zpkwbf3riz641kafn699qsg0h746zqzi1kfn7"; depends=[boot np quantreg rgl]; }; - crskdiag = derive2 { name="crskdiag"; version="1.0"; sha256="18qx8i069c7xck7rfgfkrnw409ikv1jx375vlq7vqp61qx91lqic"; depends=[cmprsk]; }; - crunch = derive2 { name="crunch"; version="1.8.0"; sha256="0z0035bv70b13xjxbqa97bpjkr44dw7k3fca96xhjkwn83vjm62f"; depends=[curl digest httr jsonlite]; }; - cruts = derive2 { name="cruts"; version="0.2"; sha256="1qxhkikym2f775zf4zg0pd960lcdd183fpnmd7afm75lm2xpzccv"; depends=[lubridate ncdf4 raster sp stringr]; }; + crskdiag = derive2 { name="crskdiag"; version="1.0.1"; sha256="0100wbyvchx6jwlrwc6rwhdjanips5c0f5zqzs2c0dgwygpqw30w"; depends=[cmprsk]; }; + crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; + crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; + crul = derive2 { name="crul"; version="0.3.0"; sha256="1a59zb2ifxg59yzjyf1gq4fk0vqvc0alvifpn2rssis8jyr6g7wr"; depends=[curl httpcode mime R6 urltools]; }; + crunch = derive2 { name="crunch"; version="1.14.4"; sha256="11pj3pbb9hs7bwdmgr10jlir95rq4xdn4qmyklqjls2kgh9r9sfn"; depends=[curl httpcache httr jsonlite]; }; + cruts = derive2 { name="cruts"; version="0.3"; sha256="0yn6xc2wg23nkjnsb7kii7dn897wf4ymnpmgppacrsznl8mmlmgd"; depends=[lubridate ncdf4 raster sp stringr]; }; + cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csampling = derive2 { name="csampling"; version="1.2-2"; sha256="0gj85cgc3lgv7isqbkng4wgzg8gqcic89768q2p23k4jhhn6xm2w"; depends=[marg statmod survival]; }; - cshapes = derive2 { name="cshapes"; version="0.5-1"; sha256="1mdg0yjp3jplj2jr5kqs2n4j9l2419n5xp3xnjv8kc8a8anc2asg"; depends=[maptools plyr sp]; }; + cshapes = derive2 { name="cshapes"; version="0.6"; sha256="0mp6grkibmqk4k1yi4w2sglpp9ari5cfw4iip49a0z58qa98npw7"; depends=[maptools plyr sp]; }; cslogistic = derive2 { name="cslogistic"; version="0.1-3"; sha256="1s8p3qpz81nn6zr0pzw6h9ca3p6ahd8zj640vy5gcb5waqwj6bfj"; depends=[mvtnorm]; }; csn = derive2 { name="csn"; version="1.1.3"; sha256="102w1qh9hgz4j9lh5hnbw1z3b7p034si73q4pkk564a2mhzlksw4"; depends=[mvtnorm]; }; + csp = derive2 { name="csp"; version="0.1.0"; sha256="1pc5mcn9difpp4cmfb0a8pqhbpkfakxjkbr7bpqmfiwcfk8rzr1h"; depends=[]; }; csrplus = derive2 { name="csrplus"; version="1.03-0"; sha256="0kljndmiwblsvvdnxfywida9k0dmdwjq63d934l5yl6z7k4zd0xa"; depends=[sp]; }; + cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; }; + cstab = derive2 { name="cstab"; version="0.2"; sha256="0wvcsxfbrw9p1y0l81m4i5p2x8alrzrq30lmprmx2hgazv038b4g"; depends=[cluster fastcluster Rcpp]; }; cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; }; + csv = derive2 { name="csv"; version="0.4"; sha256="00nvxr9q8sphmb44vhwszknpd77gzmp8r87r5imd3rwdmql8vs31"; depends=[]; }; csvread = derive2 { name="csvread"; version="1.2"; sha256="1zx43g4f4kr7jcmiplzjqk2nw1g5kmmfap85wk88phf6fp0w8l5p"; depends=[]; }; - ctmcmove = derive2 { name="ctmcmove"; version="1.2.1"; sha256="0hca63bsqk0jymmcpn6f76mp0s90jm9c03min40svlfriapqb5f4"; depends=[crawl Matrix raster]; }; - ctmm = derive2 { name="ctmm"; version="0.3.1"; sha256="0y8mmc09q5gsanddwxivynwpvwa9hwafayqqk57xjh1xsnsdbxn5"; depends=[expm manipulate MASS Matrix numDeriv pbivnorm raster rgdal scales sp]; }; + csvy = derive2 { name="csvy"; version="0.1.3"; sha256="0vszbxqa88sdsi73wng4y8zxhrvcksqa6qs3rbh50c2nll8r8kb3"; depends=[yaml]; }; + cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; }; + ctl = derive2 { name="ctl"; version="1.0.0-0"; sha256="12hrrql9wz43s1d3sfyzlqzx7ajrl3hvf96776ik6icbm8by8h6j"; depends=[MASS qtl]; }; + ctmcd = derive2 { name="ctmcd"; version="1.0"; sha256="1qv2r7myrvr0a5gcrs6bi46dm4kicyyn95rkr6qyvvdnz2i2mhqm"; depends=[expm numDeriv Rcpp RcppArmadillo]; }; + ctmcmove = derive2 { name="ctmcmove"; version="1.2.7"; sha256="1bhzwh1hhfda49p52ixvicx2mbca28mhnhh4h6nvm2i3m72dkfrq"; depends=[fda gdistance Matrix raster sp]; }; + ctmm = derive2 { name="ctmm"; version="0.3.5"; sha256="0lg3mrwdsphwj1c0r4655a1glk49p0y60rd1w11jvz16y6r6j59b"; depends=[expm manipulate MASS numDeriv pbivnorm raster rgdal scales]; }; + ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; }; cts = derive2 { name="cts"; version="1.0-20"; sha256="0bsf52b98fji85j01qv0krc7yzr8mqhvn7w1zsy2rbanjmlwmnca"; depends=[]; }; - ctsem = derive2 { name="ctsem"; version="1.1.5.2"; sha256="0rh4ikkkmzz2nrd62zbky6chxkx9hfdjr65iqp38b4pw0wdkvnvp"; depends=[MASS Matrix OpenMx]; }; - ctv = derive2 { name="ctv"; version="0.8-1"; sha256="1fmjhh4vr4vcvqg76dzp1avqappsap5piki1ixahikwbwirxcwvw"; depends=[]; }; - cubature = derive2 { name="cubature"; version="1.1-2"; sha256="1vgyvygg37b6yhy8nkly4w6p01jsqg2kyam4cn0vvml5vjdlc18a"; depends=[]; }; + ctsem = derive2 { name="ctsem"; version="2.2.0"; sha256="0gi2lh9wyl0bl1dhlmifciyj4f0xffxqswhhcrybff5dv7bip3nv"; depends=[Matrix OpenMx plyr rstan]; }; + ctv = derive2 { name="ctv"; version="0.8-2"; sha256="0xpxxkn6x26vmdkd2hkn8afyn95q2yg4kl5i989dipqzxc47fbrv"; depends=[]; }; + cubature = derive2 { name="cubature"; version="1.3-6"; sha256="0ck9lrk39pnb3piz5dpgsbkbcppx7hq61c3hpjk5mcacgxnd8jvy"; depends=[Rcpp]; }; cubfits = derive2 { name="cubfits"; version="0.1-2"; sha256="07phnpgag68ss08qyzhj2g1s084w0cc583a30i09c82ql9j3gbpk"; depends=[coda foreach]; }; cudaBayesreg = derive2 { name="cudaBayesreg"; version="0.3-16"; sha256="1xsamdsg4cq7l5r7czkg70j5gypf1dak3h353xfbz3rq0r0dni19"; depends=[cudaBayesregData oro_nifti]; }; cudaBayesregData = derive2 { name="cudaBayesregData"; version="0.3-11"; sha256="1cls9xqgps7icjpi1mllkrksdxwc1jfhxgffvrcrqx2l16vw6qfx"; depends=[]; }; cudia = derive2 { name="cudia"; version="0.1"; sha256="1ms3bc8sp6l3bm75j418mmb707sy3gyvxznhfias3nd4sw7i074x"; depends=[MCMCpack mvtnorm]; }; cumSeg = derive2 { name="cumSeg"; version="1.1"; sha256="01hn3j1i7bi2r9vsqwbgy1f1alcisxyf4316xx57bg82lb34d0s5"; depends=[lars]; }; cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; - curl = derive2 { name="curl"; version="0.9.6"; sha256="0zlpa7ilxdcf3754xgnsiipqsjv896wimgay4lk3ddadplrh76wc"; depends=[]; }; + cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; + curl = derive2 { name="curl"; version="2.3"; sha256="0gbw5l0wnsw26fbr08gj9vgxrzxg8axvqxfshmd8g9khpgbdl0gr"; depends=[]; }; + curlconverter = derive2 { name="curlconverter"; version="0.7.0"; sha256="03nv3kkw171qxafy0acbfs7kxaz89i1l7jyi3n46f5fapks4vx4x"; depends=[clipr curl formatR httr jsonlite magrittr purrr stringi V8]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; + curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; curvHDR = derive2 { name="curvHDR"; version="1.1-0"; sha256="0cymz4i29sih9z5hkih86db41x39kzzm9vq1374rfxz26l2c00xy"; depends=[feature geometry hdrcde KernSmooth ks misc3d ptinpoly rgl]; }; curvetest = derive2 { name="curvetest"; version="2.2"; sha256="1lz6rx9fmgyrlci1dyanscp2a18ki9lhrwnrzhp062flysffimg6"; depends=[locfit R_methodsS3 R_oo]; }; cusp = derive2 { name="cusp"; version="2.3.3"; sha256="130m0is48bp11p5fpg17lwqwlavsa8fzfxjs0z62vl6lm006aahw"; depends=[]; }; - customizedTraining = derive2 { name="customizedTraining"; version="1.0"; sha256="0ywyn5jqlhizvsa19xs89xs5bl1sbismjajdk78w1py1s97z9k8w"; depends=[FNN glmnet]; }; + customizedTraining = derive2 { name="customizedTraining"; version="1.1"; sha256="0rlfsnhmmcwx7iyjavj03v4kdfzxcqjggi8qpgmi6lkli3n0s6pg"; depends=[FNN glmnet]; }; cutoffR = derive2 { name="cutoffR"; version="1.0"; sha256="1801jylmpp4msyf07rhg4153kky1zvi4v0kkjb9d51dc7zkhh531"; depends=[ggplot2 reshape2]; }; cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; + cvequality = derive2 { name="cvequality"; version="0.1.1"; sha256="0pqvaz8vfwd0x433rrdwdwjp3hgsw1nb5nzsxci5zibjksk14kgp"; depends=[]; }; cvplogistic = derive2 { name="cvplogistic"; version="3.1-0"; sha256="1lm66nn0q7665r64rdslxp35b7drdss4mys42ks54xdydcminns9"; depends=[]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; @@ -3618,54 +4463,69 @@ in with self; { cwm = derive2 { name="cwm"; version="0.0.3"; sha256="1ln2l12whjhc2gx38hkf3xx26w5vz7m377kv67irh6rrywqqsyxn"; depends=[MASS matlab permute]; }; cxxfunplus = derive2 { name="cxxfunplus"; version="1.0"; sha256="0kyy5shgkn7wikjdqrxlbpfl3zkkv4v1p8a1vv0xkncwarjs4n8d"; depends=[inline]; }; cycleRtools = derive2 { name="cycleRtools"; version="1.1.1"; sha256="1l7w2lm4s149ndd85v41pkdrdig6l3nmhl14bdx56aw8q57fxmb0"; depends=[Rcpp xml2]; }; - cyclocomp = derive2 { name="cyclocomp"; version="1.0.0"; sha256="0a8xg5ivkswbmrmz7zby2ja3l0zdnpz3dlkwq1m4nbpjbyhkvlw5"; depends=[]; }; + cyclocomp = derive2 { name="cyclocomp"; version="1.1.0"; sha256="0gky3svk02wiajw7nfjh30684h3qxili4bvsab0m7b6cggw6bgyd"; depends=[callr crayon desc remotes withr]; }; cycloids = derive2 { name="cycloids"; version="1.0"; sha256="00pdxny11mhfi8hf76bfyhd1d53557wcbl2bqwjzlpw5x3vdnsan"; depends=[]; }; cymruservices = derive2 { name="cymruservices"; version="0.2.0"; sha256="1pgk9llaz0glhgf3n60nq3xb8kp4jkk8paz4scxff3whyksxv4yn"; depends=[purrr stringr]; }; cyphid = derive2 { name="cyphid"; version="1.1"; sha256="0ya9w8aw27n0mvvjvni4hxsr4xc8dd08pjxx7zkfl1ynfn5b08am"; depends=[fda]; }; + cystiSim = derive2 { name="cystiSim"; version="0.1.0"; sha256="0pz8jxi4lgcwzrb4dh8xn63xhpaga5rzg5hwqicwv8isc16iqizd"; depends=[ggplot2 knitr magrittr]; }; cytoDiv = derive2 { name="cytoDiv"; version="0.5-3"; sha256="00c0gqgypywgbhavb15bvj6ijrk4b5zk86w85n9kwr4069b7jvwc"; depends=[GenKern plotrix]; }; d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; }; d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.1"; sha256="0xx1lpp9qpkqh991ib0l9z1wn6j67jnggrhq5gr5sm63m7sjijwn"; depends=[base64enc dendextend htmlwidgets png scales]; }; + d3r = derive2 { name="d3r"; version="0.6.1"; sha256="1j69rm37j4q6dwhqprr9cmcl2x9qlmjas025kzl5fagb554dkgy8"; depends=[dplyr htmltools tidyr]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; - dCovTS = derive2 { name="dCovTS"; version="1.0"; sha256="0lw4xdab231q83nmw2sx2abdwwqa0g7smzw14h6dabbzcdjw8h99"; depends=[doParallel energy foreach]; }; + dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; + dGAselID = derive2 { name="dGAselID"; version="1.0"; sha256="0b8n2kkpyqia6kpmgdi93917xf23r9aya33030iyk2wn18642qdj"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="1.0"; sha256="1vyrfzgb0mjddy89jagf9zqkw18b83yn6v2amhb333vnd56644fk"; depends=[]; }; - dMod = derive2 { name="dMod"; version="0.1"; sha256="0170hvgngwxr0qfl7knmj0l2gg053xj5yfd5hkfyjnl6ivcsw3c9"; depends=[cOde ggplot2 trust]; }; - dad = derive2 { name="dad"; version="1.0.2"; sha256="06zgvspmq7vj23ir1yjxhavai282lxx14m8h18qjgwvw7q5c993y"; depends=[e1071 lattice]; }; - dae = derive2 { name="dae"; version="2.7-6"; sha256="1mh4kprzzi3s6n9lfz1gq0djm9inlkydq43qpvm7wljk2hbcdqnr"; depends=[ggplot2]; }; - daewr = derive2 { name="daewr"; version="1.1-6"; sha256="1gk7hs7m4ma505i6n8wf3c9ifzz93w8qljmb03xf13c9qchrqi61"; depends=[BsMD FrF2 lattice]; }; - daff = derive2 { name="daff"; version="0.1.4"; sha256="1g08m9qyrlwxdy9w18132dc9klz6ayw5jbn700vkzvqibfc1l7cx"; depends=[jsonlite V8]; }; + dMod = derive2 { name="dMod"; version="0.3.2"; sha256="1m0rpq78h2vhgl07jsk94hf03zj42wjc08hi6q5lqj77czwpaxfg"; depends=[cOde ggplot2 stringr trust]; }; + dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; + dad = derive2 { name="dad"; version="2.0.0"; sha256="0s9x8h6d3vy0y9in54abcm7y80qnywxbyh5l8ds4sv35y6j5j4pz"; depends=[e1071 lattice]; }; + dae = derive2 { name="dae"; version="2.7-20"; sha256="13nw3q0r17g1xsnnlggf4x6pd5ycg6vy34gy7pk5509mh0hfj38w"; depends=[ggplot2]; }; + daewr = derive2 { name="daewr"; version="1.1-7"; sha256="01n9g3adjk66wx9lm9gl6wa3y9ba5w0w0p5ayj8rx5ywxnm8fnvi"; depends=[BsMD FrF2 lattice]; }; + daff = derive2 { name="daff"; version="0.2.0"; sha256="1yfydnfghh8943sa206jps55par4nzghqvd7xqi8xm0zimn0p7rn"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; dagR = derive2 { name="dagR"; version="1.1.3"; sha256="13jyhwjvvrjjja18rqzfdcw9ck90qm5yjwd25nygxgdf1894y03b"; depends=[]; }; dagbag = derive2 { name="dagbag"; version="1.1"; sha256="1hpg7fs1yhnycziahscymkr0s3a2lyasfpj0cg677va73nrpdz12"; depends=[]; }; - dagitty = derive2 { name="dagitty"; version="0.1-9"; sha256="077dnhg6wwi82ncn369mygdam0a5db1521kfng68aba2h540zm1a"; depends=[boot jsonlite MASS V8]; }; - dams = derive2 { name="dams"; version="0.1"; sha256="0h0chh9ahsfvqhv1a0dfw88q7gdl1d0w11qcw0w4qmc2ipsl52i6"; depends=[RCurl]; }; - darch = derive2 { name="darch"; version="0.10.0"; sha256="0hs7w4p4azmbiif5b3fi4pngl33v16afwm2lnv8yhykh94y6y96q"; depends=[ff futile_logger]; }; + dagitty = derive2 { name="dagitty"; version="0.2-2"; sha256="11jpjr2l89glr9962mbhy4dfbdjs80nf603w90xx16s4qcmcsghc"; depends=[boot jsonlite MASS V8]; }; + dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; }; + dams = derive2 { name="dams"; version="0.2"; sha256="0hf5s8i61r5q4h3s8dfmdl3vkj7v15ha59pjvpjqx3yihsgziqz9"; depends=[RCurl]; }; + darch = derive2 { name="darch"; version="0.12.0"; sha256="17nvxqxbbdv4qdallld5f2c6nhhszsz7ja04rhz5g3844s87bv2f"; depends=[caret futile_logger ggplot2 Rcpp reshape2]; }; + darksky = derive2 { name="darksky"; version="1.0.0"; sha256="03vdzxz5wxwsjz08rg18zsmrg4n7dpgrrm70zrqa5pmyq1swhh2n"; depends=[dplyr ggplot2 gridExtra gtable httr]; }; darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; - data_table = derive2 { name="data.table"; version="1.9.6"; sha256="0vi3zplpxqbg78z9ifjfs1kl2i8qhkqxr7l9ysp2663kq54w6x3g"; depends=[chron]; }; - data_tree = derive2 { name="data.tree"; version="0.3.0"; sha256="0imji1kvh9749sz3mqd9avqkcb73svw0vd9i8q5bwzqniqnkpzwi"; depends=[DiagrammeR R6 stringr]; }; + dat = derive2 { name="dat"; version="0.1.0"; sha256="1gpanrwgj7qgp4r033qfpk0a3xjk4ww1fa1bz80k9g4a0dizlcw0"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; + data_table = derive2 { name="data.table"; version="1.10.4"; sha256="0ykbjr1x50ajxbri385vi3mnxj7zg1dcgh9y0snp341qmmmdypw6"; depends=[]; }; + data_tree = derive2 { name="data.tree"; version="0.7.0"; sha256="0rgpapxsqnbzjcifnz3p41b6j8h9x2yfixr5ryd03v8vzgikyf9b"; depends=[DiagrammeR R6 stringr]; }; + dataMaid = derive2 { name="dataMaid"; version="0.9.2"; sha256="13wim5375vlhaba2gawjb7lykzfj4py89cdhip44xaq19agg5675"; depends=[ggplot2 gridExtra haven pander rmarkdown robustbase]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; - dataRetrieval = derive2 { name="dataRetrieval"; version="2.5.2"; sha256="0j8jjzillxagyrm55ymm7xi502cigyzfidrq732rih56904lww2y"; depends=[curl dplyr httr lubridate readr reshape2 XML]; }; + dataRetrieval = derive2 { name="dataRetrieval"; version="2.6.3"; sha256="1bgjn5j0kcd9ysi12pyqygv96vcd0ld67ika9z46lcx9n99zq35d"; depends=[curl dplyr httr lubridate readr reshape2 xml2]; }; datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; }; - datacheckr = derive2 { name="datacheckr"; version="0.1.1"; sha256="0b5abanxk5l2vigchw8ir7akl2n4lbjxqndkkkf2c1sh7sx5hs4i"; depends=[dplyr magrittr]; }; - datadr = derive2 { name="datadr"; version="0.8.5"; sha256="1nlwfaidpypznc0yqfwx2z040pl40fm2l2dm8qzb68klvabgd0kn"; depends=[codetools data_table digest dplyr hexbin magrittr]; }; - dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.6"; sha256="18m4cbr3pxdn5ynxwd8klwwli3cyfjcn83pl17sn1rbavqlnkq5c"; depends=[]; }; - datafsm = derive2 { name="datafsm"; version="0.1.0"; sha256="1xnv55ls64b7b0ipr2zn5g6kg7f50bb5pnaxh3nz79yhawdr74fz"; depends=[caret GA Rcpp]; }; + datacheckr = derive2 { name="datacheckr"; version="0.1.2"; sha256="1z9r7f82rl6x63bl6mcvdvb0pbc6n0202vn9hh0lqf86qz30q7dp"; depends=[dplyr magrittr]; }; + datadr = derive2 { name="datadr"; version="0.8.6"; sha256="0fmywnxcvw31vfb9iaxqiw19ycnd98v41pdsdknabysr7fpnygfq"; depends=[codetools data_table digest dplyr hexbin magrittr]; }; + dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.2.1"; sha256="0hlvnnn3gs73m6gryr6ngmd9sdlamwmdmac3fawbbyna2if5b77n"; depends=[assertthat downloader dplyr httr jsonlite lubridate readr]; }; - datastepr = derive2 { name="datastepr"; version="0.0.1"; sha256="1dzx7mw9hl2f8q638m3vwva7mdlb59bgjc5rmpcjb5nxmylpx0vk"; depends=[dplyr lazyeval magrittr R6 rlist]; }; + dataone = derive2 { name="dataone"; version="2.0.1"; sha256="0n1c87wb15q7ysz0q5r69g57hk0vpd66m0w9wjbcjlyfn8whqa08"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; + datapack = derive2 { name="datapack"; version="1.0.1"; sha256="1ka4yxggdm9yify4vdbsrnxarjx0yab4p94xyzks72xqn6kpwarg"; depends=[digest hash redland uuid XML]; }; + datapasta = derive2 { name="datapasta"; version="1.1.0"; sha256="0cvcb074blc35kl709s6gpii353pfn1biscl5d9jma4ad9i0fi5a"; depends=[clipr readr rstudioapi]; }; + datarobot = derive2 { name="datarobot"; version="2.4.0"; sha256="1whlzakr01v5wrzv4fmpzml5xdk1vk48mmnhnh41hycxgssvlp04"; depends=[httr jsonlite yaml]; }; + dataseries = derive2 { name="dataseries"; version="0.1.0"; sha256="1z2hvksk9c9rnwi0r2i61sbkiwk3g2q8knxh08w6wkj9864payhw"; depends=[]; }; + datasets_load = derive2 { name="datasets.load"; version="0.1.0"; sha256="029rxg0h17nszkxgq5kjd0njymb8pgdsabmz5slshzd2ijjh82jz"; depends=[DT miniUI shiny]; }; + datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; datautils = derive2 { name="datautils"; version="0.1.4"; sha256="0adg87p9rzz62cm0s80x71mhsg3yfg93gskv1hs1l8gaj78zd1y1"; depends=[deldir gplots gtools]; }; dataview = derive2 { name="dataview"; version="2.1.1"; sha256="1nn33h5c1h4a3zm1xm7sdz4s6sy0f3r53jhm7bv6qk7aiylwqf6v"; depends=[data_table xtermStyle]; }; - date = derive2 { name="date"; version="1.2-34"; sha256="066zsddpw87x1bhl3479k6fd1wrl3x91n5rd454diwmwq2s8i5qb"; depends=[]; }; + date = derive2 { name="date"; version="1.2-37"; sha256="0321kqvpy5cvl8hmm6pd0pyjpi30glm8hvw60mrql6y28sn6pqhl"; depends=[]; }; dave = derive2 { name="dave"; version="1.5"; sha256="0sw9hc4y9wdfbnnk6isg7z7sky6ni68pkjxdlrph5m7jcyqphz96"; depends=[labdsv vegan]; }; dawai = derive2 { name="dawai"; version="1.2.1"; sha256="0i0vgd4kia2hgx88rjdyi0y8hikzii4mwgal46c9iiqb6gmf8vrj"; depends=[boot ibdreg mvtnorm]; }; dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; - dbarts = derive2 { name="dbarts"; version="0.8-5"; sha256="1w170mdfl5qz7dv1p2kqx0wnkmbz2gxh2a4p7vak1nckhz2sgpgn"; depends=[]; }; + dbarts = derive2 { name="dbarts"; version="0.8-7"; sha256="0wmwg8g8xy83yv4wpdpas3jjs5jxx258wh9463q30a8hnr3izc0l"; depends=[]; }; + dbfaker = derive2 { name="dbfaker"; version="0.1.0"; sha256="00n2z4q5drpg26pw826i16rg07m7w66a0r466q2lrl14hxs4rcaq"; depends=[assertive DBI dplyr foreach parsedate RPostgreSQL tidyr]; }; + dbhydroR = derive2 { name="dbhydroR"; version="0.2-2"; sha256="06m1llg1il0v4v8yi62z26hglzrhzw009y81xpb9zaphcviqp2qr"; depends=[httr reshape2 XML]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; - dbmss = derive2 { name="dbmss"; version="2.2-4"; sha256="13dvdylra6ladpvgm3imad6wqqb1gaqhbb3s5l2lywx58kxrpnl8"; depends=[cubature Rcpp RcppParallel spatstat]; }; - dbscan = derive2 { name="dbscan"; version="0.9-6"; sha256="1a7x190lsz53p5n54zcmv02940ikpnc3jw8irybcal79yf0nqmb9"; depends=[Rcpp]; }; + dbmss = derive2 { name="dbmss"; version="2.3-0"; sha256="02dmm7djm4k5c9cz0dcs5fkdnld6xmj110619yry2z307irdqamk"; depends=[cubature Rcpp RcppParallel spatstat]; }; + dbscan = derive2 { name="dbscan"; version="1.0-0"; sha256="0yqng42d7nl4x2qnkpvv5cj426gzdx872gcwfblys73hw20v09ky"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.4"; sha256="1miba5h5hkpb79kv9v9hqb5p66sinxpqvrw9hy9l5z4li6849yy1"; depends=[cluster pls]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; }; @@ -3674,23 +4534,29 @@ in with self; { dcmr = derive2 { name="dcmr"; version="1.0"; sha256="1a89wr1n8sykjbwa316zlmcffaysksrqnbd89anxqj8sgw9xv6jq"; depends=[ggplot2 KFAS plyr reshape2 tableplot]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddR = derive2 { name="ddR"; version="0.1.2"; sha256="00mb9xq69dvl50v5429nw0mjazgjwh2sp98w8n2cwhhamjgp42k9"; depends=[Rcpp]; }; - ddalpha = derive2 { name="ddalpha"; version="1.1.3.1"; sha256="0vi7crw30mfpllmspicilz1vwhbsmlzx2mfs53kv2hs8vj7r1in8"; depends=[BH class MASS Rcpp robustbase]; }; + ddalpha = derive2 { name="ddalpha"; version="1.2.1"; sha256="0nsd515x6bap1qpfyx141hyldmpmyasnhv0f8s9dj6zcklp89af4"; depends=[BH class MASS Rcpp robustbase]; }; ddeploy = derive2 { name="ddeploy"; version="1.0.4"; sha256="06s4mn93sl33gldda9qab8l3nqig8zq0fh1s2f98igsysmn31br5"; depends=[httr jsonlite]; }; - ddpcr = derive2 { name="ddpcr"; version="1.1.2"; sha256="0xz8ms77k24k47scs9x4vipdj370id783dxk30rdi94xcg8hns6m"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; - ddst = derive2 { name="ddst"; version="1.03"; sha256="0zbqw4qmrh80jjgn8jzbnq3kykj1v5bsg6k751vircc0x9vnig3j"; depends=[evd orthopolynom]; }; - deSolve = derive2 { name="deSolve"; version="1.13"; sha256="1amxkzakk5ipz06z50wm61i5p4a5kfvjqad5whwp6n5xq5msx621"; depends=[]; }; - deTestSet = derive2 { name="deTestSet"; version="1.1.2"; sha256="142261xjlz6h9vakiks04rz7hgv9b5j6s77acavd5s5mpi51ysh7"; depends=[deSolve]; }; + ddpcr = derive2 { name="ddpcr"; version="1.6"; sha256="1jwrggj9cbq31z8qcfhfm3zb4z7jir8kkmjg7yqs5nmpl41pv5jn"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; + ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; + deBInfer = derive2 { name="deBInfer"; version="0.4.1"; sha256="05khyjpyxwrm9q8jsysffgsjpjbw76w9rrl7i8ia0yc9lv0bzjc9"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; + deSolve = derive2 { name="deSolve"; version="1.14"; sha256="1c4yv5xjk36xwjs0ywxfas1f2xcg05ppf4380s0l3k7gl7vx44g4"; depends=[]; }; + deTestSet = derive2 { name="deTestSet"; version="1.1.5"; sha256="07wbgniwkpp0yry6wvchvszr8isxs1i9k6km951r5c009w1iviwk"; depends=[deSolve]; }; + deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; deal = derive2 { name="deal"; version="1.2-37"; sha256="1nn2blmxz3j5yzpwfviarnmabbyivc25cbfhcf814avrhpysvpxa"; depends=[]; }; deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; debug = derive2 { name="debug"; version="1.3.1"; sha256="0mpwi6sippxyr1l8xf48xqv6qw6pmfkxs13k1gjyd7bkzlbchgqd"; depends=[mvbutils]; }; - decisionSupport = derive2 { name="decisionSupport"; version="1.101.1"; sha256="08qcvdwp0wgspnfnlhkpxz3p6y43pjf32p185knw8g81wr1950ip"; depends=[msm mvtnorm]; }; + debugme = derive2 { name="debugme"; version="1.0.1"; sha256="14yhkvh05748jfn2dsdllflsjnjljhjm8kkzzqb7zcp6qjylwcys"; depends=[crayon]; }; + decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; + decisionSupport = derive2 { name="decisionSupport"; version="1.101.2"; sha256="0zmf87wjrpkg12ix8dz3asrwldwvclj1ifvzff46zgipdm3viqr0"; depends=[msm mvtnorm]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; - decompr = derive2 { name="decompr"; version="4.1.0"; sha256="1agzfy7iyyzh71pb56l7438bvpsx0q2z9mxh16fc8mfnywcl2jr2"; depends=[]; }; + decoder = derive2 { name="decoder"; version="1.1.12"; sha256="0jacp5fqi3l87a86kzhivwd7bl9ndcpymw1vkzmr9r5my8d119pk"; depends=[backports]; }; + decompr = derive2 { name="decompr"; version="4.5.0"; sha256="1kbk4z1pr1j4i1sgfkjxzjy2j2fcmrf3vacnrpv1fba2ib10619k"; depends=[]; }; decon = derive2 { name="decon"; version="1.2-4"; sha256="1v4l0xq29rm8mks354g40g9jxn0didzlxg3g7z08m0gvj29zdj7s"; depends=[]; }; - deconstructSigs = derive2 { name="deconstructSigs"; version="1.6.0"; sha256="1gs8ym0h99zh0ccd8akl72sj5lbangadh3fn5vwb6al7qgzpflfz"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19 reshape2]; }; + deconstructSigs = derive2 { name="deconstructSigs"; version="1.8.0"; sha256="014x0nb23jb98666kaav2phkvmkr38pi38jv0dqd4jv7zp0gdf1a"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb reshape2]; }; + deconvolveR = derive2 { name="deconvolveR"; version="1.0-3"; sha256="1b6ghds0mj9nv4nypfx0w6sm6q9k83mbprk546ird3pza6ncjqbi"; depends=[]; }; deducorrect = derive2 { name="deducorrect"; version="1.3.7"; sha256="10lvhdnnc6xiy20hy6s5rpqcvilj8x0y6sn92rfjkdbfsl00sslp"; depends=[editrules]; }; - deductive = derive2 { name="deductive"; version="0.1.0"; sha256="1ivjn7v92v64gkbij5yqsr1090gnxjxxvnvmns1dwvycz32va6dp"; depends=[lintools stringdist validate]; }; - deepboost = derive2 { name="deepboost"; version="0.1.4"; sha256="08h1r9ganbcy2bljs7kccws16zs9ns0n0qspj8qczf87ya93vhfj"; depends=[Rcpp]; }; + deductive = derive2 { name="deductive"; version="0.1.1"; sha256="09illy2zxbn7xi3vl4m0d40h1dsci3qfwhyd3wqdkb89grbysacq"; depends=[lintools stringdist validate]; }; + deepboost = derive2 { name="deepboost"; version="0.1.5"; sha256="1varzk3dlsxl8y1p4cblw3ivk5h088agsxar02jbl9hs3r6pj17l"; depends=[Rcpp]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degenes = derive2 { name="degenes"; version="1.1"; sha256="1xxn5j06qizywimrp1pl8z3yjdy1a167b9jnm77gmv87rp6j240c"; depends=[]; }; @@ -3700,52 +4566,66 @@ in with self; { deltaPlotR = derive2 { name="deltaPlotR"; version="1.5"; sha256="0hbaibl4b50pg9ypyhz4700w6kir4jiyyl0230a8hjmb92aqn303"; depends=[MASS]; }; demi = derive2 { name="demi"; version="1.1.2"; sha256="04dq4db9ibvv91nm0gz8dfbgv1gpmalf9hv6i78dwhh1xzjg1mig"; depends=[affxparser affy devtools oligo plyr R_utils]; }; deming = derive2 { name="deming"; version="1.0-1"; sha256="00v59qb6qwbwsvcwi59d0c0g3czfz1190ccj4dx6yarizr4g6cy8"; depends=[boot]; }; - demoKde = derive2 { name="demoKde"; version="0.9-3"; sha256="1nkvsjms1gfvjz5l7zza0cgx4yqmn2kgnax44pysn0zqmhfny8bw"; depends=[]; }; - demography = derive2 { name="demography"; version="1.18"; sha256="17r7sz5ikngc4qg495wmn99xawmllpx7rw2gpv8q8bypbc47wlfv"; depends=[cobs forecast mgcv RCurl strucchange]; }; - dendextend = derive2 { name="dendextend"; version="1.1.8"; sha256="0ssf0fzs1h2jc4p8p2z9fyf4f0p9942z3zrkawyafddbixkkz7vh"; depends=[magrittr whisker]; }; + demoKde = derive2 { name="demoKde"; version="0.9-4"; sha256="0p4v808m42wbv8ibdfqzm43cbbg0yl452wnm1mzqq2n37z6yljkr"; depends=[]; }; + demography = derive2 { name="demography"; version="1.19"; sha256="08cfvsvv6ayxy93vihavyb3lddgwfdlwrb2x4is5fxids79lpm9x"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; + dendextend = derive2 { name="dendextend"; version="1.4.0"; sha256="0piqa8jvzarkkxmrv8hz11gg1jzm75b2fbrmd3nkwv4fcjlzpa0x"; depends=[fpc ggplot2 magrittr viridis whisker]; }; dendextendRcpp = derive2 { name="dendextendRcpp"; version="0.6.1"; sha256="125kjlfcj7y282j5g62c6j5hflvwngrm70waxym0lzr7xldwx7bk"; depends=[dendextend Rcpp]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.1"; sha256="0k1w374r4fvfcbzhrgcvklccjggyz755z7wc2vqfi3c5hvdb9ns4"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; - denovolyzeR = derive2 { name="denovolyzeR"; version="0.1.0"; sha256="0ys8pi3wp2cvywsnh07wldv6vcb8sn7f1divpaw8f6gnw7mnhimd"; depends=[dplyr reshape]; }; + denoiseR = derive2 { name="denoiseR"; version="1.0"; sha256="094nknr3hyx4kv18vnpdzrcpmfb4r7x9jgrp3p6x4nwrgzdh3r95"; depends=[FactoMineR irlba Matrix]; }; + denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; }; densityClust = derive2 { name="densityClust"; version="0.2.1"; sha256="0blq6h6x071bcy3shr77b3bwq1im0013vbg7gckdhljm859n07bh"; depends=[Rcpp]; }; + densratio = derive2 { name="densratio"; version="0.0.3"; sha256="07da5spbzr8x7sv6pdknc64a5zhs3dgnpcx4s2v68vc31xsd0gqd"; depends=[]; }; denstrip = derive2 { name="denstrip"; version="1.5.3"; sha256="10h8ivs7nd6gkf93zvqzqjb1lzfabvvs182636m67f86jfn6d4y4"; depends=[]; }; - depend_truncation = derive2 { name="depend.truncation"; version="2.4"; sha256="09jcg6gr4dy0ayayn8qvbgncnw6v76xzif90c7v64a09snhh8qv6"; depends=[mvtnorm]; }; + depend_truncation = derive2 { name="depend.truncation"; version="2.5"; sha256="0g9p7a6p15shd1cl5rwxzi2m5llmj22hk94f2d9g693j3gccfzfa"; depends=[mvtnorm]; }; depmix = derive2 { name="depmix"; version="0.9.14"; sha256="12mvsd9zab55yg02r309h5i7hldwhh3bd60bzcvwip8vsmym5611"; depends=[MASS]; }; depmixS4 = derive2 { name="depmixS4"; version="1.3-3"; sha256="0ls30v59hzyd684w4a3aygq1i5m8iq4gxsh8mmjxdq8qx0v84hk2"; depends=[MASS nnet Rsolnp]; }; - depth = derive2 { name="depth"; version="2.0-0"; sha256="1aj4cch3iwb6vz0bzj4w5r6jp2qs39g8lxi2nmpbi3m7a6qrgr2q"; depends=[abind circular rgl]; }; + depth = derive2 { name="depth"; version="2.1-1"; sha256="17fxv4a5fbb65p7kmb4iakik5ng6401y7gmknkfr66fmjq65i1sm"; depends=[abind circular rgl]; }; depth_plot = derive2 { name="depth.plot"; version="0.1"; sha256="0zjg9iyqmcnkvwc9w2j7lmk3k9nsg6n8m6vq5x44d1bp4g2gr6jv"; depends=[mvtnorm]; }; depthTools = derive2 { name="depthTools"; version="0.4"; sha256="1699r0h1ksgrlz9xafw2jnqfsc7xs0yaw97fc6dv3r11x6gxk00y"; depends=[]; }; - dequer = derive2 { name="dequer"; version="1.0"; sha256="1xf2kl6ppgsplqwhxxyak39575bjijh81snq534yndf31pdqqhd7"; depends=[]; }; + dequer = derive2 { name="dequer"; version="2.0-0"; sha256="1cvc201g6jc0y09vccswsvvwlmxi7w8raffpald4b3pin10zfr6q"; depends=[]; }; + derivmkts = derive2 { name="derivmkts"; version="0.2.2"; sha256="00bcffqzzsm2h4gfwri772q8i7h40xhv07wl8xj682fnlk246ggs"; depends=[mnormt]; }; + desc = derive2 { name="desc"; version="1.1.0"; sha256="0mc1jmiwqyj7s6gzxz6fyamzjpmdn3rpfpllby2fq11ml30c6jpr"; depends=[assertthat crayon R6 rprojroot]; }; descomponer = derive2 { name="descomponer"; version="1.2"; sha256="08hc3p4l8dy1h2z8ijifwlgidmac9b29g1k725yzwzbdr5jzvnzl"; depends=[taRifx]; }; - descr = derive2 { name="descr"; version="1.1.2"; sha256="1bqr63s2w0gak117506f5v7k9wfj08cn6jy6idw5ii7x6jjh6xx7"; depends=[xtable]; }; + descr = derive2 { name="descr"; version="1.1.3"; sha256="0fp91gbxxxvn2hqdyddhb3x85031wgq7gnqrhzjr956prlv086r6"; depends=[xtable]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; + descriptr = derive2 { name="descriptr"; version="0.1.0"; sha256="11fq98zpzvjgzihh4431javsznvhqgfrhf86m33j6fnxh3gg4d0z"; depends=[dplyr magrittr]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; - desiR = derive2 { name="desiR"; version="1.2"; sha256="0hznl6qf5np797j7a63sgggxrkz483fcfp42525vswgw3qsjvxlp"; depends=[]; }; + desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; designGLMM = derive2 { name="designGLMM"; version="0.1.0"; sha256="0ya246mqclkhg8cq6f5mzqn67qks22f3fribyjcvhrx395n0f21v"; depends=[]; }; - designmatch = derive2 { name="designmatch"; version="0.1.1"; sha256="0s0mlisczf15zdw7jcl6lc4rhbzhfbpjjp2k64sjlvykcmzx5f04"; depends=[lattice MASS Rglpk slam]; }; - desirability = derive2 { name="desirability"; version="1.9"; sha256="1p3w4xk4is22gqgy2gyxj80vib8s40lgllqc2fnz66kb2cln10n6"; depends=[]; }; + designmatch = derive2 { name="designmatch"; version="0.2.0"; sha256="1l6504yfrlx24n7r0dd6g66rzjg35yz3s4niyg25mc8biwqags6y"; depends=[lattice MASS Rglpk slam]; }; + desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; - desplot = derive2 { name="desplot"; version="1.0"; sha256="1x8x0nqmirmx4l8cdl5fqy01j5ljlnldjh5yz06qwjv4ykqd41dc"; depends=[lattice reshape2]; }; + desplot = derive2 { name="desplot"; version="1.1"; sha256="0lqamq90hajrz43crych8a1k5m645ljhy1rmxjk9vyl4hwrbk5dc"; depends=[lattice reshape2]; }; detect = derive2 { name="detect"; version="0.4-0"; sha256="119kvkgpgd12v31ps1bg5dmc9djkaqzls548nlrvn1pbmahfnfx5"; depends=[Formula pbapply]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - devEMF = derive2 { name="devEMF"; version="2.0"; sha256="19wraakvf7xsf1i108dz3ipl1hdixgwa6h0bizxfyajw5yqmw8mw"; depends=[]; }; - devtools = derive2 { name="devtools"; version="1.10.0"; sha256="11x51bqhjwypbxv5sfnrnxx06b92k8kzmmx7zrwk3537r072b6pa"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; }; + detzrcr = derive2 { name="detzrcr"; version="0.1.2"; sha256="0hw88kizz0kcz4i1lqz30gixiq7im91875p2wpvbnzyxhs3n04vi"; depends=[ggplot2 MASS shiny]; }; + devEMF = derive2 { name="devEMF"; version="3.3-1"; sha256="1s0rmw3gsyj28ywlkfdjr98fr7cjhmzb0fq5qn9s91dw9a3fx8zf"; depends=[]; }; + devRate = derive2 { name="devRate"; version="0.1.1"; sha256="088i9m9ys59p2a961183ac2w6wa0idb4xvyfnxqz9rpiins8d0bg"; depends=[]; }; + devtools = derive2 { name="devtools"; version="1.12.0"; sha256="1m5g6xnq7r4s3a0nlpa88fp5x6c8nl5icnp4869y5zwdk2ijqgla"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; }; + dexter = derive2 { name="dexter"; version="0.1.7"; sha256="1bpj6izqgp4mi9h4kpm9xhnm8h6j9lvdizr31w51ljs8lkphzpwd"; depends=[colorspace plyr reshape2 RSQLite]; }; df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; }; - dfcomb = derive2 { name="dfcomb"; version="2.1-5"; sha256="1dswkx3wqcpil6xs6xifr596iqy15ld473hdlrb6p760alqzx13s"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfcomb = derive2 { name="dfcomb"; version="2.1-6"; sha256="14jyagnrsbzdwcfy0z6c9gwbv40xrnany43ylpks6qgnq4rya7a2"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; dfcrm = derive2 { name="dfcrm"; version="0.2-2"; sha256="1kwgxfqnz2bcicyb27lp6bnvrj30lqjpn5fg7kaqshgkj53g0s4f"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; - dfmta = derive2 { name="dfmta"; version="1.3-3"; sha256="0rmgjwqn4qwhs0yfzq417k1w0cgya903a8g3zm6p3fksmvyz4hyk"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; - dfoptim = derive2 { name="dfoptim"; version="2011.8-1"; sha256="19j0h5xdrbmykz2nrjrwqwaw7466zvqaiwafrm1jc12mk5azfcqx"; depends=[]; }; + dfmta = derive2 { name="dfmta"; version="1.3-4"; sha256="18lmgpv6jhjs15difiq0jck6kf898ngr2g13wrf3y5s5xc70iwkp"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; + dfoptim = derive2 { name="dfoptim"; version="2016.7-1"; sha256="1hs0ln5iz3h1x1b27jai83r3gad6698zwhr2jgpviiv9zwhic8c2"; depends=[]; }; + dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; + dfpk = derive2 { name="dfpk"; version="2.0.0"; sha256="0nn0m4kvjsyv48xribkab0jnbv0db17aan9flnkg5jh4s03pg9sc"; depends=[BH dfcrm ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; + dggridR = derive2 { name="dggridR"; version="0.1.11"; sha256="179pi20rs0mp5aqydhw34wczrkyavndaaccjr017gp456gza1a83"; depends=[dplyr ggplot2 rgdal]; }; dglars = derive2 { name="dglars"; version="1.0.5"; sha256="02g8x4p98jv3cfwfxvh68aivb72651w4977g4xqksq0p4nqcs636"; depends=[]; }; - dglm = derive2 { name="dglm"; version="1.8.2"; sha256="1bxdvalwinn814rdsy7pjrx87wpz7kl67w1136rnf1sc8yly6j5f"; depends=[statmod]; }; + dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; + dgodata = derive2 { name="dgodata"; version="0.0.2"; sha256="03cyiig8pn7fdkrkrd29cwy5g63bp57bpl9jmdxfi03smngzbz0m"; depends=[]; }; dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; - dhglm = derive2 { name="dhglm"; version="1.5"; sha256="0n3878bx8vwf7na6plvdg9m1rd9qg7450g6mpx955d3s2bg320x0"; depends=[boot Matrix numDeriv]; }; + dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; }; + dhglm = derive2 { name="dhglm"; version="1.6"; sha256="0xb9kn87zv4xc9rwq0w6hxsc47vhdx59akjp4nv1ffz69y03h5wv"; depends=[boot MASS Matrix numDeriv]; }; + diagis = derive2 { name="diagis"; version="0.1.0"; sha256="12k4z0j5nmacy8ddi8ddyn8fabg6k728hms6x1sjnghr2wwns5cw"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo]; }; diagonals = derive2 { name="diagonals"; version="0.4.0"; sha256="03n6lm0hkgylswgj1qlgrjigm7basl5frip99mxx19mvaqa3bhqy"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.3"; sha256="1iga574r31hz7g50nmicbah4rj4l46w6lgw3sz1b69iv6hpp7sq1"; depends=[shape]; }; diaplt = derive2 { name="diaplt"; version="1.2.1"; sha256="0pya6rqzsvc5nd3smhydvabarglc4nn04q605vbllmbhq9rv00pa"; depends=[]; }; @@ -3754,105 +4634,126 @@ in with self; { dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; diezeit = derive2 { name="diezeit"; version="0.1-0"; sha256="0rq1k08byvqn99wpql7drnrcxlzcqrcxixh7bczbc8dv1hhsgk9i"; depends=[brew httr jsonlite]; }; - difR = derive2 { name="difR"; version="4.6"; sha256="1803j0ql1g8gdy9i0wy4sz9sbl52dqjqcwbnknyrb34r51jmij5k"; depends=[lme4 ltm]; }; + difNLR = derive2 { name="difNLR"; version="1.0.0"; sha256="123r6r3n90x87p2pzsfbrcmfqjv4vb9jm0s4bq6byk1pbhsrw2ah"; depends=[CTT ggplot2 nnet reshape2]; }; + difR = derive2 { name="difR"; version="4.7"; sha256="17i8l4z7dw8nfr4b5pc72l1qm7byjcflh58kasafx9kxyvfgz258"; depends=[lme4 ltm]; }; diffEq = derive2 { name="diffEq"; version="1.0-1"; sha256="1xmb19hs0x913g45szmm26xx5xp85v182wqf0lnl4raxaf47yhkm"; depends=[bvpSolve deSolve deTestSet ReacTran rootSolve shape]; }; diffIRT = derive2 { name="diffIRT"; version="1.5"; sha256="0kip6wz9l9q80qsqwf32pwz7d9vqin6dgfwf0nxlrlzf8xjsxgim"; depends=[statmod]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; diffeR = derive2 { name="diffeR"; version="0.0-4"; sha256="08g21h3yq8rm2i6ah364nfadg7hnghc21jnpi5aqwzqyd2v93b67"; depends=[ggplot2 raster rgdal]; }; + diffobj = derive2 { name="diffobj"; version="0.1.6"; sha256="0f6wskh3nl8ngh195x8wiv1g0fc690r4zh4ypkraqd2c6x1iskg7"; depends=[crayon]; }; diffr = derive2 { name="diffr"; version="0.0.1"; sha256="0lhk9vm9gp0pwzsniy49dgq9vd4c1bxf8c8w8ib4b4fg5jq3hfwj"; depends=[htmlwidgets]; }; diffractometry = derive2 { name="diffractometry"; version="0.1-8"; sha256="1m6cyf1kxm9xf1z4mn4iz0ggiy9wcyi8ysbgcsk7l78y7nqh1h99"; depends=[]; }; + diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; }; + diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; }; diffusionMap = derive2 { name="diffusionMap"; version="1.1-0"; sha256="1l985q2hfc8ss5afajik4p25dx628yikvhdimz5s0pql800q2yv3"; depends=[igraph Matrix scatterplot3d]; }; - digest = derive2 { name="digest"; version="0.6.9"; sha256="0ixy1mb7kfl20lkckqiilpw03g1ip4ibihs03gicz7w625hc7zcm"; depends=[]; }; + diffusr = derive2 { name="diffusr"; version="0.1.0"; sha256="14fzfr2i2qwbgc2rihqz4p8id6wrlvn0b5cvfrrvks6d62fk3zn2"; depends=[Rcpp RcppEigen]; }; + digest = derive2 { name="digest"; version="0.6.12"; sha256="1awy9phxdvqnadby7rvwy2hkbrj210bqf4xvi27asdq028zlcyd4"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; + digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; + dimRed = derive2 { name="dimRed"; version="0.0.3"; sha256="0rmw55g0vmvpk26akxjqp7d4wlkfrjz1j28azmwc5vmhimffl3vx"; depends=[DRR]; }; dina = derive2 { name="dina"; version="1.0.1"; sha256="1wjnpmjwvji41afp5pqx28w36a8jmszlcw0d3b8j82j681a5h882"; depends=[Rcpp RcppArmadillo]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; - directPA = derive2 { name="directPA"; version="1.2"; sha256="0wzmlahqcrb5f3hrlym5gs5wizmgvhndky7zvc98324bq645b56m"; depends=[calibrate rgl]; }; + directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; }; directlabels = derive2 { name="directlabels"; version="2015.12.16"; sha256="0vi9zbc2sa8fpi2n2ax1ni9f8s9w1hc0f6gahk8fcrmnagj4g089"; depends=[quadprog]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - discSurv = derive2 { name="discSurv"; version="1.1.2"; sha256="02jk2qz029i3rxikbfq66g9246gangmbzhq1cl8hxib0891j535b"; depends=[functional mgcv mvtnorm]; }; + discSurv = derive2 { name="discSurv"; version="1.1.5"; sha256="0lbzaalh1jack49px47sqsmpwmv14w4h1y2r9k294921d02zl0w5"; depends=[functional mgcv mvtnorm]; }; + discgolf = derive2 { name="discgolf"; version="0.1.0"; sha256="15bk2k7glahcbz4kyl3fiayi7ck6z3wabl9y25fg6cnxkbyh6dbn"; depends=[httr jsonlite xml2]; }; disclap = derive2 { name="disclap"; version="1.5"; sha256="0piv9gxhxcd4pbh5qjn9c3199f32y3qiw5vy8cr77ki70dnmr66n"; depends=[]; }; disclapmix = derive2 { name="disclapmix"; version="1.6.2"; sha256="01pn8hy3xbf1b1fbbsd4n2hv7gs97zalgq858xsrr4a0nqrvxmn5"; depends=[cluster disclap Rcpp]; }; discreteMTP = derive2 { name="discreteMTP"; version="0.1-2"; sha256="13qsf1kc3rph0kkdkz31qj072www5dwjyk73lfpy141rzhcn1v1x"; depends=[]; }; discreteRV = derive2 { name="discreteRV"; version="1.2.2"; sha256="1lhf67cccr96zl3j1sysh2bv0pbgvkbgjdzm35fvrdm7k74ypjsi"; depends=[MASS plyr]; }; + discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.2"; sha256="1rdcwlp6m08fjvw54f4m07ahdx1vh1wdzxpai79kchgxp0i9np9g"; depends=[Rcpp RcppEigen sparsebnUtils]; }; discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; discrimARTs = derive2 { name="discrimARTs"; version="0.2"; sha256="088v4awic4bhzqcr7nvk2nldf8cm1jqshg2pzjd2l2p1cgwmlxib"; depends=[RUnit]; }; - diseasemapping = derive2 { name="diseasemapping"; version="1.4.0"; sha256="0hypk2y92x2q5jxm5qyjkzvqldz5037gclnxa6qx64bwylv2viam"; depends=[sp]; }; - dismo = derive2 { name="dismo"; version="1.0-15"; sha256="0ahm80dp839wfx04f9qkc4wwydidhqaiajba7jynqk60kw8hhl7g"; depends=[raster sp]; }; + diseasemapping = derive2 { name="diseasemapping"; version="1.4.2"; sha256="065ndvpx3q9ycxfjl1f2iy3s23d7qf27s1qz31ppx0n929jynn6n"; depends=[sp]; }; + diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; + dismo = derive2 { name="dismo"; version="1.1-4"; sha256="1j4pzbyvn8msi3k2y79nc6pqlrald46168ibznjwrr6rdiqhy4gj"; depends=[raster sp]; }; disp2D = derive2 { name="disp2D"; version="1.0"; sha256="0q5bds2r1mqzcwmnj61dmwqv6b0s0scq5h3nim47q3wp0n4gbslz"; depends=[geometry]; }; - disparityfilter = derive2 { name="disparityfilter"; version="2.1"; sha256="0ld43hd4dr389pd8sncslp707jyfgbx7w1larq75gkzjykc29aqw"; depends=[igraph]; }; + disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; dispmod = derive2 { name="dispmod"; version="1.1"; sha256="141gzhnmxxl495cpjgd4wnvdrbz6715m6sd1pycrbaqrsdc1pv57"; depends=[]; }; disposables = derive2 { name="disposables"; version="1.0.1"; sha256="1gmmf34hq8vm2gjg1560hkarppxmzakymgjbpzbpy2j471kd9s7a"; depends=[]; }; dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; }; distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; }; distcomp = derive2 { name="distcomp"; version="0.25.4"; sha256="0drh7a79nvc6l6c0q2k9hva6kpb8ik6q2aiynp8ab8pf0dh84h6d"; depends=[digest httr jsonlite R6 shiny stringr survival]; }; + distdrawr = derive2 { name="distdrawr"; version="0.1.2"; sha256="1i1rkkic3kz2cs7fq4sb7zfr6s4wini8g1851yxzs9bjgqpsch1d"; depends=[]; }; distfree_cr = derive2 { name="distfree.cr"; version="1.0"; sha256="13y714l6b3kkpp75fdrsbdclgj1vw1xsvbj9pxi4lkwf11wwmrqr"; depends=[]; }; distillery = derive2 { name="distillery"; version="1.0-2"; sha256="12m4cacvc18fd3aayc8iih5q6bwsmvf29b55fwp7vs8wp1h8nd8c"; depends=[]; }; distory = derive2 { name="distory"; version="1.4.2"; sha256="12j19cb1b4prm8m43gya15kia1ii1k0yy7hkngpn2vsyk7n2z65m"; depends=[ape]; }; - distr = derive2 { name="distr"; version="2.5.3"; sha256="13ssdidbh4x534f0vvhfpi5cdrhlpmrz8s0y33q7ccf3dfmdsyan"; depends=[sfsmisc startupmsg SweaveListingUtils]; }; - distrDoc = derive2 { name="distrDoc"; version="2.5.1"; sha256="02wcqy9z36lxkpxy42vj1yv7x2v3i57rngpw58s7immzp5j3dlam"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg SweaveListingUtils]; }; - distrEllipse = derive2 { name="distrEllipse"; version="2.5"; sha256="1slzzmcf09mqqba287rpgpwbsq6j5lprjgxda5lrc21znvrgfxn3"; depends=[distr distrEx distrSim mvtnorm setRNG]; }; - distrEx = derive2 { name="distrEx"; version="2.5"; sha256="0mbccd53r9wl875i702j14wlrv7pjgrwzlnyc511cqa5pg3mn81i"; depends=[distr]; }; - distrMod = derive2 { name="distrMod"; version="2.5.3"; sha256="1xa6a8fxhb87z4bimvnrylm63q9m90kmm49w2dik79a9d5x5q29b"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; - distrRmetrics = derive2 { name="distrRmetrics"; version="2.5"; sha256="0c7fhckw7hav68gag8ymgicywl2vbnvqpjxca0x24wpdi1gs4jf6"; depends=[distr fBasics fGarch]; }; - distrSim = derive2 { name="distrSim"; version="2.5.2"; sha256="0ipg4l2vyifaj1r9a4cc8kg32s65jpz5wxrlnrix95xk5wasdpbh"; depends=[distr setRNG]; }; - distrTEst = derive2 { name="distrTEst"; version="2.5"; sha256="1swl4v70gkkpidddsgqf0dqz9j0xz5j1wk44bhpi4ficim7hap3l"; depends=[distrSim setRNG startupmsg]; }; - distrTeach = derive2 { name="distrTeach"; version="2.5"; sha256="0a7qfqpirzcd94dvcvmprhhj2j1yl3lpizsi8mdqr19zcp6dw21k"; depends=[distr distrEx]; }; + distr = derive2 { name="distr"; version="2.6"; sha256="0f2y3ycng2chbhas0bq8zqp314lsm8c39chxpg40dcfq0f1z3rmk"; depends=[MASS sfsmisc startupmsg SweaveListingUtils]; }; + distrDoc = derive2 { name="distrDoc"; version="2.6"; sha256="19yjns5cv2jp551kbld30xmdzljxr0lj5gps0lxfv8d7mrj09kf7"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg SweaveListingUtils]; }; + distrEllipse = derive2 { name="distrEllipse"; version="2.6.2"; sha256="1rhpnwsml7vs2nkn4q4203fi0qwfc4pxgva0b4z30zzhywb0p3hg"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; + distrEx = derive2 { name="distrEx"; version="2.6"; sha256="10gx646xg2rysj9p3pf1a13fqibs84i2nlvxppf3vc5z74vjxk4a"; depends=[distr startupmsg]; }; + distrMod = derive2 { name="distrMod"; version="2.6.1"; sha256="1i7b08i8zjv2k4p2j1nlqbyjrcapf52k2my83i75hcrjqdy8r3sv"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; + distrRmetrics = derive2 { name="distrRmetrics"; version="2.6"; sha256="077ryxl6l6fql81nsl7dm16pawsqd0l6ljfpkrnzjab4mljqaxgp"; depends=[distr fBasics fGarch startupmsg]; }; + distrSim = derive2 { name="distrSim"; version="2.6"; sha256="1kq85ivnw4mplpr2jmc2w19kvk0d1wffz6laypay2j5gyd8fm44x"; depends=[distr setRNG startupmsg]; }; + distrTEst = derive2 { name="distrTEst"; version="2.6"; sha256="1c0xwpyr5gs89psiflcz5dplsb1g9r651jiqg8nxcqa05r9kyhkr"; depends=[distrSim setRNG startupmsg]; }; + distrTeach = derive2 { name="distrTeach"; version="2.6.1"; sha256="0x60xlij1m9q7xhi9vnf61vb2px9aah8iqaki6d87c1pxylmqnvr"; depends=[distr distrEx startupmsg]; }; distrom = derive2 { name="distrom"; version="0.3-3"; sha256="1kpbrsa7ml72zvmdcpbbz2rsv4lpqd5i2w3v488ji6nbi44v1gp6"; depends=[gamlr Matrix]; }; divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; }; diveMove = derive2 { name="diveMove"; version="1.4.1"; sha256="13vgnjifvjsrhh3ns5l2gxwf80bg3a3j3n9ycblzjyjpl7i1960i"; depends=[caTools geosphere KernSmooth quantreg]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.89"; sha256="0f75dak14x9x9xs6ql9686n6w1f0w5g6h5ya983mg547f1zzbw9m"; depends=[ggplot2 qgraph Rcpp shiny]; }; - diverse = derive2 { name="diverse"; version="0.1.1"; sha256="1k4fxaizasv47cnlijm8dhdb5lagqrmhn6g0nk6mhca21n3qdjsd"; depends=[foreign proxy reshape2]; }; - diversitree = derive2 { name="diversitree"; version="0.9-8"; sha256="02cr8wrahm3kljj7gpmfwadjlca04a8gvm0i65436yj2lh4vxqa8"; depends=[ape deSolve Rcpp subplex]; }; + diverse = derive2 { name="diverse"; version="0.1.4"; sha256="0c5a2ippnygyny9bkqk8s9vywq5207nss0ikywgji8ld0zvxsmi6"; depends=[foreign proxy reshape2]; }; + diversitree = derive2 { name="diversitree"; version="0.9-9"; sha256="00dzw9fpcdgfvf7jl3lr2a2gpfd8pr17myih04v5hkxpjmsydawp"; depends=[ape deSolve Rcpp subplex]; }; + divest = derive2 { name="divest"; version="0.2.0"; sha256="0yhk83dmwkii1w355vqmcn4wsm3k8npm4v8wsf6knvqrszh6zh0s"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="0.1.2"; sha256="1g3wv89zjd5x0qic39jy81kl488gila3lwdjdilm9dxh4kb4dbw5"; depends=[cluster RcppCNPy]; }; dixon = derive2 { name="dixon"; version="0.0-5"; sha256="0x7x0l7p8kmkfqqqah8hck2r96b3w8padd41skd3q35vq8kmnsqc"; depends=[spatstat splancs]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; + dlib = derive2 { name="dlib"; version="1.0"; sha256="0d6p28r86jq7gwqh3njnsfgl6mmgx7famqx7p1xmra91cdlp3hqj"; depends=[Rcpp]; }; dlm = derive2 { name="dlm"; version="1.1-4"; sha256="0hyphl90bqc16j7in750pmiyq28hmc46kxgv7gj17c8xl9c9xqxm"; depends=[]; }; dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; }; dlmodeler = derive2 { name="dlmodeler"; version="1.4-2"; sha256="06gqvk2wrzz4kpsh4vyrbqwmxirsvg78qj7clvcxdac0sfqn4gl7"; depends=[KFAS]; }; - dlnm = derive2 { name="dlnm"; version="2.2.3"; sha256="0b9gicyhdkx0pd0l883qr1sxmxi0qpwjk4allwp0dpr5y1nnrkzg"; depends=[mgcv nlme tsModel]; }; + dlnm = derive2 { name="dlnm"; version="2.3.2"; sha256="1gkpdy1mgnhiabfrfi41p3n8kzh2l480qrf3v50n8p3xcjamiagp"; depends=[mgcv nlme tsModel]; }; + dlsem = derive2 { name="dlsem"; version="1.7"; sha256="087yb5psc0yklpa5fpfazi1y5ngl8hmibfm9yfyvw652z6ykyvka"; depends=[graph gRbase nnet Rgraphviz]; }; + dlstats = derive2 { name="dlstats"; version="0.0.9"; sha256="0dgd4f8whk94whk9larvsp5axwijcdv5ib33akdysf25zf191mi2"; depends=[jsonlite magrittr]; }; dma = derive2 { name="dma"; version="1.2-3"; sha256="00nwx0835i4njlqxzizs9v29d3xkq2i7rdd24xzc9bzd0c4naq4d"; depends=[MASS mnormt]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; - dmm = derive2 { name="dmm"; version="1.6-3"; sha256="15c5hvjjnr9c4sg34jx31abldjladls73rsszkqsdpd95li334xg"; depends=[MASS Matrix nadiv pls robustbase]; }; + dmm = derive2 { name="dmm"; version="1.7-1"; sha256="0ihzbv2vlymyr1l0xi0jmx0xgpbj46azd7gwr3m9qsgnjp7wc1p8"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; + dmutate = derive2 { name="dmutate"; version="0.1.1"; sha256="14lv16lqvlccf84s1g1qrz88y732qzb9545skg6fjrldcr8b0hl4"; depends=[dplyr]; }; dna = derive2 { name="dna"; version="1.1-1"; sha256="0gw70h1j67h401hdvd38d6jz71x1a6xlz6ziba6961zy6m3k5xbm"; depends=[]; }; - dnet = derive2 { name="dnet"; version="1.0.7"; sha256="0aa64y7mm1xan34h1pimajm7hvlm7z3r9rikysc2dw5dskkhli40"; depends=[Biobase graph igraph Matrix Rgraphviz supraHex]; }; - doBy = derive2 { name="doBy"; version="4.5-14"; sha256="01dhigi6qj0lmhas2d06ysm7ph71rfk5kj5sbivxi8a2dx8f73yl"; depends=[MASS Matrix survival]; }; + dnc = derive2 { name="dnc"; version="1.2"; sha256="0a0nc1yx6vhbjsik9pidda97i7s6ndlsm8pzx29ccmxlmqncc18b"; depends=[BayesLogit igraph MCMCpack movMF plot3D plot3Drgl Rcpp RcppArmadillo skmeans vegan]; }; + dnet = derive2 { name="dnet"; version="1.0.10"; sha256="011rqvwski3jh5nmn84pg3pxznbfm37gjz7sp7n6f3x3y807q2rg"; depends=[Biobase graph igraph Matrix Rgraphviz supraHex]; }; + doBy = derive2 { name="doBy"; version="4.5-15"; sha256="0n1ml47f78nqhy92a0fgsb4brz0qyfr4q3c7im8pnb0ngia4ssdx"; depends=[MASS Matrix]; }; + doFuture = derive2 { name="doFuture"; version="0.3.0"; sha256="1np7g4dqxkbfrilcbyrfdkppdv558xl9a4s4wgcxb2in6h27zzwp"; depends=[foreach future iterators]; }; doMC = derive2 { name="doMC"; version="1.3.4"; sha256="0y47jl6g4f83r14pj8bafdzq1phj7bxy5dwyz3k43d2rr8phk8bn"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.1"; sha256="1d2pkxsap656l7h88q37ymy1jw0zd4n9h892511a1a230dxwc0xh"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.10"; sha256="1mddx25l25pw9d0csnx2q203dbg5hbrhkr1f08kw0p02a1lln0kh"; depends=[foreach iterators]; }; doRNG = derive2 { name="doRNG"; version="1.6"; sha256="0yvg4052gfdh54drn6xnpiqyd77p8765yi525nag3ismw2yn9y58"; depends=[foreach iterators pkgmaker rngtools]; }; doRedis = derive2 { name="doRedis"; version="1.1.1"; sha256="10ldfzq6m83b9w24az9bf5wbfm6y9gi233s8qgsk4dnr84n3nizx"; depends=[foreach iterators rredis]; }; doSNOW = derive2 { name="doSNOW"; version="1.0.14"; sha256="1xfk48i465sv2jqzydsaff3a656ggkrxzvhsqnrsgqh1k3423a1g"; depends=[foreach iterators snow]; }; - docopt = derive2 { name="docopt"; version="0.4.3.3"; sha256="1vpq5q3kfgwijrgblvfipxqkw0m75rahnlmddpiyfgziyszbmidm"; depends=[stringr]; }; - docopulae = derive2 { name="docopulae"; version="0.3.2"; sha256="1r5kva5z15nw1mdb3jma722ajj5mic9jrfj9x993nf8mz7lvsc19"; depends=[]; }; + docopt = derive2 { name="docopt"; version="0.4.5"; sha256="1pwng6018ls0hk785bs8yjwpzsqr2pcvzgpavqd9rw19n5lvzhxn"; depends=[stringr]; }; + docopulae = derive2 { name="docopulae"; version="0.3.3"; sha256="13889sj509gbl9zs7jqdvslp6sc81jv54cbqh1wpp834jp5s1q3x"; depends=[]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - docxtractr = derive2 { name="docxtractr"; version="0.1.0.9000"; sha256="1g59xbg86qh871q8cphjp7jzd1g1dglx4h2n7f48m9vj1ha87h02"; depends=[dplyr xml2]; }; - domino = derive2 { name="domino"; version="0.2-7"; sha256="1wp2rikyggjvqpg29qjn3zcydyplmzhmbgq3xxrlq92swdyzmyy5"; depends=[]; }; - dosresmeta = derive2 { name="dosresmeta"; version="1.3.2"; sha256="1v0hf8x0qjzhxwa60ri2vhjv05z9iaf90dvhpmjjjrgskb7qpcd9"; depends=[aod Matrix mvmeta]; }; + docxtools = derive2 { name="docxtools"; version="0.1.0"; sha256="109fv2sg4dw6s10b4fx44npwvyr5yr69y7m701irqpc0bbwssh55"; depends=[dplyr ggplot2 pander stringr tibble tidyr]; }; + docxtractr = derive2 { name="docxtractr"; version="0.2.0"; sha256="197j57ab8x960b1yfq6xp8fwmq51xs04nf0cb16r161h4bcmgs2j"; depends=[dplyr purrr tibble xml2]; }; + domino = derive2 { name="domino"; version="0.3.0"; sha256="0lhrnrpyz98cl16a1xk7x0299kxkz303myyz61nw3x6f7kh1gvd6"; depends=[]; }; + dosresmeta = derive2 { name="dosresmeta"; version="1.3.3"; sha256="0j0718mlzwnnxc7rm9yqm9izsa7c2kbwfx9ai2ygj3xki9wr70jm"; depends=[aod Matrix mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; - dotenv = derive2 { name="dotenv"; version="1.0"; sha256="1lxwvrhqcwj9q24x30xzrw8qqhxgyr88ja3fajm5hf3pwbw85yls"; depends=[falsy magrittr]; }; - dotwhisker = derive2 { name="dotwhisker"; version="0.2.0.5"; sha256="1sigvyymyw7ayjg984zmwzsa45ywarjfczbxki8vj04sgkns0ss4"; depends=[broom dplyr ggplot2 gridExtra gtable plyr stringr]; }; + dotCall64 = derive2 { name="dotCall64"; version="0.9-04"; sha256="0qp6magpp0jaa0b9sfkbxd91afayl24kj0yrh0ix1v3ahdnaar8f"; depends=[]; }; + dotenv = derive2 { name="dotenv"; version="1.0.1"; sha256="1xvzsnb6v904829lqxmypn56jkm98lw4wpcvljn8620w2wipark5"; depends=[]; }; + dotwhisker = derive2 { name="dotwhisker"; version="0.2.3"; sha256="0q5l7vkypnh1rxlh5yd8jq4kql62wqf60gdpf7cds437w8fs8c01"; depends=[broom dplyr ggplot2 gridExtra gtable plyr stringr]; }; downloader = derive2 { name="downloader"; version="0.4"; sha256="1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"; depends=[digest]; }; - downscale = derive2 { name="downscale"; version="1.2-1"; sha256="10lri6k4w1jm2d8r2vj8qdjpdyr33al1vbd9s3s02lh48v8qgzif"; depends=[cubature minpack_lm raster Rmpfr sp]; }; + downscale = derive2 { name="downscale"; version="1.2-4"; sha256="080zlfz0yhznymr7icc2m7w5c0pqiak1qp22ywcfcb6d0mri3k8l"; depends=[cubature minpack_lm raster Rmpfr sp]; }; + downsize = derive2 { name="downsize"; version="0.2.1"; sha256="0cl143b6rn5l7q67vd9kjj5sdqq13s2fww722vqcq7ham20k2wsp"; depends=[dplyr R_utils]; }; dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; }; - dpcR = derive2 { name="dpcR"; version="0.3"; sha256="1k9gz1j1b25lhzw7ism7klahs1q8xfyq1wagj90j3nps9agn9chd"; depends=[binom chipPCR dgof e1071 multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; }; + dpcR = derive2 { name="dpcR"; version="0.4"; sha256="02j7fhhfq7p2wfcnr7rdy65v6dcvdym3nfyps7717p7b429chchc"; depends=[binom chipPCR dgof e1071 evd multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; }; dpglasso = derive2 { name="dpglasso"; version="1.0"; sha256="1mx28xbm2z2bxyp33wv2v6vgn1yfsdsa0bzjjdxasgd6lvr51myf"; depends=[]; }; - dplR = derive2 { name="dplR"; version="1.6.4"; sha256="08h2l6af64g37fbaqx8y0phzca6x1ppvmk6mmqy73k03467jq6mk"; depends=[digest gmp lattice Matrix matrixStats png R_utils stringi stringr XML]; }; + dplR = derive2 { name="dplR"; version="1.6.5"; sha256="0npprzn8jz57192d4mblzx3hcibbas085mvhhy69cz5n2rdj78jr"; depends=[digest gmp lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; - dplyr = derive2 { name="dplyr"; version="0.4.3"; sha256="1p8rbn4p4yrx2840dapwiahf9iqa8gnvd35nyc200wfhmrxlqdlc"; depends=[assertthat BH DBI lazyeval magrittr R6 Rcpp]; }; + dplyr = derive2 { name="dplyr"; version="0.5.0"; sha256="0ks5cklb03laqf5ygcw986g1lv7wk1ipvypjlha8xly2y4lvilwk"; depends=[assertthat BH DBI lazyeval magrittr R6 Rcpp tibble]; }; dpmixsim = derive2 { name="dpmixsim"; version="0.0-8"; sha256="0paa2hmpd6bqf0m7p9j7l2h3j18lm64ya6ya8zvp55wm8pf7xgqg"; depends=[cluster oro_nifti]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; dprep = derive2 { name="dprep"; version="3.0.2"; sha256="0iw1pqpqlv436wpwh1w832aqvy91zvxmbk2jdw7aczrb29wys2bj"; depends=[class e1071 FNN MASS nnet rgl rpart StatMatch]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; }; - drat = derive2 { name="drat"; version="0.1.0"; sha256="0pcmgzgvkdlfh8nriqy2nvs3wqv3p072y9152g1k5xl71drbrdg6"; depends=[]; }; + drat = derive2 { name="drat"; version="0.1.2"; sha256="14nmbxy2y51bi258fmx24pkwmga791hnwzbx6jy2sl55g3vrxjpz"; depends=[]; }; drawExpression = derive2 { name="drawExpression"; version="1.0"; sha256="0c2daicqrjlqf7s788cknzvw9c6rm500lgmwfr7z03bq7bd2ah90"; depends=[]; }; - drc = derive2 { name="drc"; version="2.5-12"; sha256="1gw78n0w262wl6mdm5wvyp3f0hvrb2kj714acdxz84h2znxr9879"; depends=[car gtools MASS multcomp plotrix scales]; }; - drfit = derive2 { name="drfit"; version="0.6.4"; sha256="0n2dclq7y9npnhpx6nmidr4d6f3mn5z9ysjqp61yw1iwa4ymw3ks"; depends=[drc MASS]; }; - drgee = derive2 { name="drgee"; version="1.1.4"; sha256="1hfaaan7yxnznrwn5f866kp70r37gzml455vmplynrhx6ddd3rwy"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; + drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; + drfit = derive2 { name="drfit"; version="0.6.7"; sha256="0sh447qfx310wb19xcr1sbpap3jbi1nhmdzdrd5695zh2zcav2p7"; depends=[drc MASS]; }; + drgee = derive2 { name="drgee"; version="1.1.6"; sha256="01404mqvkvndn5gybq8dgkfc1cy9wk94p7k7i64h47w3zbkcwsax"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; drm = derive2 { name="drm"; version="0.5-8"; sha256="1p6ixd7hnv41gfmvan3rv9xzz1279hmrnvfrl6pxwzs9zcnbb53a"; depends=[]; }; drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; @@ -3860,98 +4761,129 @@ in with self; { ds = derive2 { name="ds"; version="3.0"; sha256="10xp575l0wh85wg32k3as02kgqm9ax9nx9i5kd5bkimfwg4qv745"; depends=[]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; dse = derive2 { name="dse"; version="2015.12-1"; sha256="1976h57zallhzq43nshg77bsykcvkfwnasha1w59c44fjpl1gs9w"; depends=[setRNG tfplot tframe]; }; + dslabs = derive2 { name="dslabs"; version="0.0.1"; sha256="1v47w75h9m911smg25w0bmxzjfc3yyig2npp9sfyfx61h6jdh5a2"; depends=[]; }; dslice = derive2 { name="dslice"; version="1.1.5"; sha256="0qwz9rlgpgx0k28hca2m40ab0qad9rfp1gxswygchv7rcnl4f6ml"; depends=[ggplot2 Rcpp scales]; }; - dsm = derive2 { name="dsm"; version="2.2.9"; sha256="147c94bk73ss7bcliz4a65zx0lhf3gap9ygcc82yvf7sibpasnqd"; depends=[ggplot2 mgcv mrds nlme statmod]; }; + dsm = derive2 { name="dsm"; version="2.2.14"; sha256="1zcm4111qzl7mf160z7ax9gvvs627nig4zimxagzm2jdp004w10r"; depends=[ggplot2 mgcv mrds nlme numDeriv statmod]; }; + dsmodels = derive2 { name="dsmodels"; version="1.0.0"; sha256="094kif1ffbqlznsfig1rqkpgjd6r7dnlwwmjnlhwax05xvv3dl92"; depends=[shape]; }; dst = derive2 { name="dst"; version="0.3"; sha256="1gdf4sjk2svywx2m6z22d383xppsm6dm108w93pcwfs8fpcdwxb9"; depends=[]; }; - dti = derive2 { name="dti"; version="1.2-4.1"; sha256="0wn5hksv8szxslf1v5z2wnkscj3igl76swrapp1i6zlf5j9cjqp7"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; + dtables = derive2 { name="dtables"; version="0.2.0"; sha256="0ikgip3p4b7q97b2dshlx0fq09xsk304gfk5prw4rk95w9wck3qs"; depends=[psych]; }; + dti = derive2 { name="dti"; version="1.2-6.1"; sha256="1p88k7qkmas49niq618jhddc0h4mwh5gd267v6rlzzpmv5f98fkb"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; + dtplyr = derive2 { name="dtplyr"; version="0.0.1"; sha256="05p51dnvx2ldjkipbhi0ia3lq6l4xv55sqnqjhlnqc4p4hfc7wwf"; depends=[data_table dplyr lazyeval]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dtw = derive2 { name="dtw"; version="1.18-1"; sha256="1b91vahba09cqlb8b1ry4dlv4rbldb4s2p6w52gmyw31vxdv5nnr"; depends=[proxy]; }; - dtwSat = derive2 { name="dtwSat"; version="0.1.0"; sha256="1897ns6f8hg6s8k710yvx48f5m0zai0ifnsan6iva749c0nmrvv3"; depends=[dtw ggplot2 proxy reshape2 scales waveslim zoo]; }; - dtwclust = derive2 { name="dtwclust"; version="2.1.1"; sha256="160r5n02z5kswy6y9i62qmm3n390q7xrkbb7plshvksy1d024zn3"; depends=[caTools dtw flexclust foreach ggplot2 proxy reshape2 rngtools]; }; + dtwSat = derive2 { name="dtwSat"; version="0.2.1"; sha256="0w0hg0cp827mw98xlq8yqmx4cs4m7zlg6gbjlxk5pm8v2a3nhn3s"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer reshape2 rgdal scales sp zoo]; }; + dtwclust = derive2 { name="dtwclust"; version="3.1.1"; sha256="0g3fffsvlwqb528y02fkazbll10yzcpblwxpc3519zff23vvb025"; depends=[caTools clue dtw flexclust foreach ggplot2 proxy Rcpp reshape2 rngtools]; }; dualScale = derive2 { name="dualScale"; version="0.9.1"; sha256="11hqxprai0s5id6wk4n2q174r1sqx9fzw3fscvqd2cgw8cjn1iwl"; depends=[ff lattice Matrix matrixcalc vcd]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; - dunn_test = derive2 { name="dunn.test"; version="1.3.2"; sha256="1w2hhv1fajxc4mxdzl4fnaxw7qz5lg9kr0jj1sdbjcfzs5v1sfl4"; depends=[]; }; + dunn_test = derive2 { name="dunn.test"; version="1.3.3"; sha256="1hkfv9p06gfv0j4fh299x0cm9rrvsbqv89kqddqf6fablxmqm7vh"; depends=[]; }; dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dvfBm = derive2 { name="dvfBm"; version="1.0"; sha256="0gx11dxkbnh759ysd1lxdarlddgr3l5gwd5b0klwvwsgck6jv529"; depends=[wmtsa]; }; - dvn = derive2 { name="dvn"; version="0.3.3"; sha256="14ncna67qgknh20xdvxqddjhagj61niwpvz4ava9k0z68rgzmk5h"; depends=[RCurl XML]; }; - dygraphs = derive2 { name="dygraphs"; version="0.8"; sha256="0jqwa021h6cgzgjcg0qg1j9wvszna64vin8cn2cd0pla57xbrdxp"; depends=[htmlwidgets magrittr xts zoo]; }; - dyn = derive2 { name="dyn"; version="0.2-9"; sha256="16zd32567aj0gqv9chbcdgi6sj78pnnfy5k8si15v5pnfvkkwslp"; depends=[zoo]; }; - dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.3"; sha256="1wgxxn0nlmza7npvjbkfq6nmp30n719yqrav6jzxcp00dk3ymg6g"; depends=[tcltk2 tkrplot]; }; + dvn = derive2 { name="dvn"; version="0.3.5"; sha256="04di2gpdacivvd9bi96w6145k280s8blavdhi1w3rw4c7sc3hag2"; depends=[RCurl XML]; }; + dygraphs = derive2 { name="dygraphs"; version="1.1.1.4"; sha256="0vwg9q7xrwxkm92d55ik9gdky42bj3jlh6fi4jzwyl5nfdswklb9"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; + dyn = derive2 { name="dyn"; version="0.2-9.3"; sha256="00h75kqfpr77jhppnpxvykbdcmsmsb2vl2527xzq10wkvm7gfpvv"; depends=[zoo]; }; + dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.5"; sha256="0fvyn33mzjcc3sis05phc6412y25m406il2wzdfw8caa8dafj0yw"; depends=[tcltk2 tkrplot]; }; dynCorr = derive2 { name="dynCorr"; version="0.1-2"; sha256="0qzhhfhkwpq6mwg7y6sxpqvcj8klvivnfv69g7x3ycha1kw2xk3w"; depends=[lpridge]; }; - dynRB = derive2 { name="dynRB"; version="0.6"; sha256="0kdbfhisw2ybqw1c7xcnlaqpsnj8vzh16iid69ajkvzxrm1qcwim"; depends=[caTools corrplot]; }; - dynaTree = derive2 { name="dynaTree"; version="1.2-7"; sha256="06pw78j6wwx7yc175bns1m2p5kg5400vg8x14v4hbrz3ydagx4dn"; depends=[]; }; + dynOmics = derive2 { name="dynOmics"; version="1.0"; sha256="10aw362hhwqdnjf7xxzy25fdxq2zznzvg6xwvl25a9ppj76nm1rh"; depends=[ggplot2 gplots snow]; }; + dynRB = derive2 { name="dynRB"; version="0.9"; sha256="0ysdlcchsszrgp2cizmli0l86ym2jz9addc21wxgdlz0vdfn7fn4"; depends=[caTools corrplot]; }; + dynaTree = derive2 { name="dynaTree"; version="1.2-9"; sha256="1a94mwllk116k9al18ckzy9p6yckvifp5hwrz2na4n2r10ivhn86"; depends=[]; }; dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; + dynamichazard = derive2 { name="dynamichazard"; version="0.2.0"; sha256="1ikl69c4hb1b4nv0zm6n3aaw928zihxzcbnwid29zdxl5ybg3bfd"; depends=[boot Rcpp RcppArmadillo stringr survival]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.1"; sha256="100g131jmgb3by9j3v2n7f7jh9623vd7xf5frjkwrxvwzf0q1i3k"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; + dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; - dynlm = derive2 { name="dynlm"; version="0.3-3"; sha256="0ym23gv2vkvvnxvzk5kh6xy4gb5wbnpdbgkb5s6zx24lh81whvcs"; depends=[car lmtest zoo]; }; + dynlm = derive2 { name="dynlm"; version="0.3-5"; sha256="1sjhhlvvcgmayb9dfwacv1g75c4lhbpzyczj6h7gkd19bcfbdhqp"; depends=[car lmtest zoo]; }; + dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; + dynr = derive2 { name="dynr"; version="0.1.8-17"; sha256="1q2rag00haniv2ffp6k7kr00zy11rpksa55sp8wymcb96x8m64mw"; depends=[ggplot2 latex2exp MASS Matrix numDeriv plyr reshape2 xtable]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; - dynsurv = derive2 { name="dynsurv"; version="0.2-2"; sha256="0418r7adki48pg3h7i1mgv3xpbryi520va3jpd03dx15zrq8zaqg"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; - e1071 = derive2 { name="e1071"; version="1.6-7"; sha256="1069qwj9gsjq6par2cgfah8nn5x2w38830761x1f7mqpmk0gnj3h"; depends=[class]; }; - eHOF = derive2 { name="eHOF"; version="1.7"; sha256="1xjn36qx12nplzvqxfcdl8brh0897abvvmsw6x7zsdsl4m88q0pa"; depends=[lattice mgcv]; }; - eRm = derive2 { name="eRm"; version="0.15-6"; sha256="0kdcdddyxp345bs5g9lipdy3s6c97bcrkgj4cd4c78s7gx4mk7ra"; depends=[lattice MASS Matrix]; }; - eVenn = derive2 { name="eVenn"; version="2.2.3"; sha256="0qliicql4yx9rih8f9ywhv40sqzgy21sdd8rg2ly0nwqlyii3537"; depends=[]; }; + dynsurv = derive2 { name="dynsurv"; version="0.3-5"; sha256="0rvwnssg876sng53viiqfcm7mxvilpds9yahj6bwgs90chnkjz4g"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; + e1071 = derive2 { name="e1071"; version="1.6-8"; sha256="08n6i26nfckjpxjkzi8phhanc3ahsrirkv5rz38y2jcv7ds031pn"; depends=[class]; }; + eAnalytics = derive2 { name="eAnalytics"; version="0.1.3"; sha256="1lrkmfs2sq9p2n7g528jf6wxixqk08w468nckkij2mprhrccjjj6"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard]; }; + eDMA = derive2 { name="eDMA"; version="1.4-0"; sha256="1nkbl6yywffb8q0x6ajymh1hpmkq038dc3a7xvw9szcjfrfbhw9v"; depends=[Rcpp RcppArmadillo xts zoo]; }; + eHOF = derive2 { name="eHOF"; version="1.8"; sha256="0g0sb98mlgvhs27s0a1x0ysj3r4p3r7i382fqzfv29kn1ayw0r5c"; depends=[lattice mgcv]; }; + eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; }; + eRm = derive2 { name="eRm"; version="0.15-7"; sha256="0x8cqcwgn8znd9w9vkxcacf097rziyb511wzcfmhhadidiilk0x3"; depends=[lattice MASS Matrix]; }; + eVenn = derive2 { name="eVenn"; version="2.3.4"; sha256="1nwbqk2hqdi7y4ys3h6nrjv1pjzyx96w7643l8nbcdg5i4bbvvls"; depends=[]; }; eaf = derive2 { name="eaf"; version="1.07"; sha256="0310lrqfm1l0lifak7wa6xn21bzzn27kbrrx0bidj4hibwv7sa4l"; depends=[modeltools]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; - earth = derive2 { name="earth"; version="4.4.4"; sha256="1i8lbn8brza7ggrrd8fkj24kj99lra47xbibv723hk0yxh4fgdpx"; depends=[plotmo TeachingDemos]; }; - easyPubMed = derive2 { name="easyPubMed"; version="1.5"; sha256="0s0c2iqqpiffch5pi2kkkrxymrhgys2iydpzci30x77knqx3cjba"; depends=[XML]; }; - easyVerification = derive2 { name="easyVerification"; version="0.2.0"; sha256="1az91skkkkg82sv287lkfmrhlwkrb235cghmrwgij1szx1askcvx"; depends=[pbapply Rcpp RCurl SpecsVerification]; }; + earth = derive2 { name="earth"; version="4.4.9"; sha256="1dyz2ac754scg474x9ksrwrqflmh9wi7qwgm494fpfi9ndd9ycig"; depends=[plotmo TeachingDemos]; }; + earthtones = derive2 { name="earthtones"; version="0.1.0"; sha256="1phl50bgd40i36fdkfs9xkqm703vgwxlnpyik6lk8ssip0m4rn9j"; depends=[ggmap]; }; + easyDes = derive2 { name="easyDes"; version="1.0"; sha256="17wjsvy9hnrp6s50ivrvahd6p147ibcn3wrlj1hx95qckqjk2b06"; depends=[multcomp PMCMR]; }; + easyPubMed = derive2 { name="easyPubMed"; version="1.7"; sha256="1gkd95ady6wqm3v89rf5k3axz3g4gv67bvr2kgci3zf3xvqzva7a"; depends=[XML]; }; + easySdcTable = derive2 { name="easySdcTable"; version="0.2.1"; sha256="0a7779xvsqzcsva9jxa10wz8bdbfp49r0w7c2dqwi9md04bv1qg1"; depends=[sdcTable SSBtools]; }; + easyVerification = derive2 { name="easyVerification"; version="0.4.0"; sha256="0jllrrp0abqkij7iq4z5paca4lgxh4lbrj5ifhrakrxdpncrg9wd"; depends=[pbapply Rcpp SpecsVerification]; }; easyanova = derive2 { name="easyanova"; version="4.0"; sha256="1d8fkgyqzphipvla7x8ipcf0by07iqx8xran15d2q82yq9iik5g9"; depends=[car nlme]; }; + easyformatr = derive2 { name="easyformatr"; version="0.1.2"; sha256="0mrpd21hyafn82apclxmhs2jbd87sdw0g6lwc3h6gl5cbm213nxb"; depends=[dplyr knitr lazyeval magrittr stringi tibble tidyr]; }; easynls = derive2 { name="easynls"; version="4.0"; sha256="1j2crqvgsf84bpwzf4qh5xkzn5mhxhfx9c0y3p8dbyn8bg7zc2rf"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; - ebGenotyping = derive2 { name="ebGenotyping"; version="1.0"; sha256="07dpvxl9xspkzvzkywclg8whgcw7vyakls38pshfypjpyd6iv8ga"; depends=[]; }; + easyreg = derive2 { name="easyreg"; version="1.0"; sha256="01wpqr2vfa245xln1zmqr1a9bibj0cnx60bw24l1q1li7r13wjyy"; depends=[car nlme]; }; + ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; - eba = derive2 { name="eba"; version="1.7-1"; sha256="0kxdhl7bc4f570m9rbxxzg748zvq0q7a0slvfr4w1f45vfzhyh17"; depends=[nlme]; }; + eba = derive2 { name="eba"; version="1.7-2"; sha256="00hlmnknif9yr4wzw0n1fzkrgbciv7ljc0gkfq34v3vvy3dmdsvq"; depends=[nlme]; }; ebal = derive2 { name="ebal"; version="0.1-6"; sha256="1cpinmbrgxxv0fzi9qi2inv4hw2lz7iq4b0ggp316rdqqb5bj9r0"; depends=[]; }; - ebdbNet = derive2 { name="ebdbNet"; version="1.2.3"; sha256="123iqp8rnm3pac5fvpzq5sqbf8nyfpf05g23nawanid6yv23ba9a"; depends=[igraph]; }; + ebdbNet = derive2 { name="ebdbNet"; version="1.2.5"; sha256="0kal4sqx12y04696ilwnwkmss4rn16dkbnalgqimz6i4jhz8n23h"; depends=[igraph]; }; + ebimetagenomics = derive2 { name="ebimetagenomics"; version="0.2"; sha256="1jbb1h2wp3fpmjivy09165qn72ign2pbss4bw9xcn2dlxaddgh1c"; depends=[sads]; }; ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; - ecd = derive2 { name="ecd"; version="0.6.4"; sha256="16jlgwyb6rmxsas6p1dgxpmfdinm422v4y1f62kh7ai0sjcf8hjm"; depends=[moments optimx polynom Rmpfr RSQLite xts yaml zoo]; }; + ecd = derive2 { name="ecd"; version="0.8.3"; sha256="0ksr5yixg4psgx4nf3y061k2fj5843f6f3xwbfl0nyfly8595s1x"; depends=[digest gsl moments optimx polynom Rmpfr RSQLite xts yaml zoo]; }; + ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; ecespa = derive2 { name="ecespa"; version="1.1-8"; sha256="0rdjr0ss7a1n66dmvykbs3x944r88l08md2rfkg9w7bxm361ib8p"; depends=[spatstat splancs]; }; + echogram = derive2 { name="echogram"; version="0.1.0"; sha256="0v0fiy2fflk7pxn8wqr75wym0m6snggvvgxpa2b35alpmqch9k18"; depends=[geosphere readHAC]; }; ecipex = derive2 { name="ecipex"; version="1.0"; sha256="0pzmrpnis52hvy80p3k60mg9xldq6fx8g9n3nnqi3z56wxmqpdv7"; depends=[CHNOSZ]; }; + eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; + ecm = derive2 { name="ecm"; version="0.6.0"; sha256="0swkaimm1nfrnb5niiihwx5i0b5l4cg8b6bmy0aipawpgpphn1yh"; depends=[car]; }; eco = derive2 { name="eco"; version="3.1-7"; sha256="0qrl1mq0nc42j4dzqhayzzb56gmkk479wgpxikzgzpj9wv78yd5s"; depends=[MASS]; }; ecodist = derive2 { name="ecodist"; version="1.2.9"; sha256="199f3lwwm8r2bnik595m540la1p4z6vbkwfqh9kimy9d0fjp8nps"; depends=[]; }; - ecoengine = derive2 { name="ecoengine"; version="1.9.1"; sha256="0y1f8ylyk9jny48z5grf4r9jcdin6clhy0vg1wkg3alsqn4iiqlg"; depends=[assertthat dplyr httr jsonlite leafletR lubridate plyr whisker]; }; + ecoengine = derive2 { name="ecoengine"; version="1.10.0"; sha256="0k24m03qpqbcdwsf6xawrh0x43b97w2pba3h4pcwl7j2p0ls91pi"; depends=[assertthat data_table dplyr httr jsonlite lubridate magrittr plyr whisker]; }; ecolMod = derive2 { name="ecolMod"; version="1.2.6"; sha256="1n30faldfhpm2jkaw793vr220kgn3bmn8hxhw32rax294krmwn4v"; depends=[deSolve diagram rootSolve shape]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.1"; sha256="1v3n5nbabw6qmwcq3sx759k6c8q4pxbffl227rv0lnnfbq77zlmc"; depends=[]; }; ecoretriever = derive2 { name="ecoretriever"; version="0.2.1"; sha256="0jg4rmxfa9k0smlkrhiqdrjk3vhhmv6w634nh9y3mrdwnq4sk466"; depends=[]; }; - ecosim = derive2 { name="ecosim"; version="1.2"; sha256="1lzjd6kl2864ngyiqyfnnra5ag9bj42pxb793gwp45r7z95k32rf"; depends=[deSolve stoichcalc]; }; - ecospace = derive2 { name="ecospace"; version="1.0.0"; sha256="18v7hclrn9s9fi1s9v6zzras2ka7gnma214w0qdmxrgkygn9a926"; depends=[FD]; }; - ecospat = derive2 { name="ecospat"; version="1.1"; sha256="070vvx00gm36rwjz2g188jn7bkljs1c7j6ap6ssrl3ihzqvc1zdz"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 dismo ecodist gam gbm maptools randomForest raster rms sp spatstat]; }; + ecoseries = derive2 { name="ecoseries"; version="0.1.1"; sha256="165vc00nhlff91dry51q9agm01b9ikqs1zgwfc7xw1rq59cqbz47"; depends=[magrittr RCurl readr rjson rvest tibble xml2]; }; + ecosim = derive2 { name="ecosim"; version="1.3"; sha256="00arz8j2az1nn4p96pshw0p9xxq2qfgkyrf4ahvl1hp1h3k68jfn"; depends=[deSolve stoichcalc]; }; + ecospace = derive2 { name="ecospace"; version="1.1.3"; sha256="01nxjbx638s8pk1ybsz9zbk35cg27x35fam419b9rjj9kspxz49s"; depends=[FD]; }; + ecospat = derive2 { name="ecospat"; version="2.1.1"; sha256="1b0bmqvspg2qxnr07lj2qlwp2i90q1bjym9rjc8jdzqbmaz9gxyr"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim PresenceAbsence randomForest raster rms sp spatstat vegan]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; - ecoval = derive2 { name="ecoval"; version="1.0"; sha256="1szvr2ipb7bd0cyslhwwwyx5kw7yx3kpqcyzxfd9pk263bny323g"; depends=[rivernet utility]; }; - ecp = derive2 { name="ecp"; version="2.0.0"; sha256="0cr3rzvd4bahg5idd857mgp005n075xql5kvjw0smsjbjh4p84wq"; depends=[Rcpp]; }; + ecoval = derive2 { name="ecoval"; version="1.1"; sha256="0ihig6nq3lrz6lzix92lrlzywnqkzsp5lrbccn5slhxdj5llird2"; depends=[rivernet utility]; }; + ecp = derive2 { name="ecp"; version="3.0.0"; sha256="0v07ak7fbiph058rlbhmgx0f230mnpi39ib8vx9bdzhx5g5lrp0j"; depends=[Rcpp]; }; + ecr = derive2 { name="ecr"; version="1.0.1"; sha256="0vyv0ik8a9wa5cv2yd66935hn1i390lm6l6g0hnaycz07rfh8rlg"; depends=[BBmisc checkmate ggplot2 gridExtra parallelMap ParamHelpers reshape2 smoof]; }; + edarf = derive2 { name="edarf"; version="1.1.0"; sha256="04gcki36xnaflg1szsdsdvdw5icsny6iaqmqyxmb2im1b1a0r39w"; depends=[data_table ggplot2 mmpf]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; + edci = derive2 { name="edci"; version="1.1-2"; sha256="10rqkimvmyb7hxp4wkpj8bq07q3yaimm058d4mmr09fw25lqyz1q"; depends=[]; }; edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; }; - edeaR = derive2 { name="edeaR"; version="0.3.2"; sha256="1z4df1i3fk40n6jzzwdldb00k6zbsf3k64np3b35k0fk1ij04cvq"; depends=[dplyr ggplot2 lubridate tidyr XML]; }; + edeaR = derive2 { name="edeaR"; version="0.4.7"; sha256="1fgngqd9qi798v435cax3kvwczq536jac6fhj5nsjbach1jlmm2y"; depends=[data_table dplyr ggplot2 lubridate magrittr tidyr XML xml2]; }; edesign = derive2 { name="edesign"; version="1.0-13"; sha256="0fc3arr8x9x9kshp6jq4m4izzc5hqyn5vl0ys6x0ph92fc6mybp3"; depends=[]; }; - edfReader = derive2 { name="edfReader"; version="1.0.0"; sha256="0c2yhhfh779x5laicx11dgrxrr65wf85n29va9q55g8agrq5bfa4"; depends=[]; }; - edgar = derive2 { name="edgar"; version="1.0.4"; sha256="1rj6dfyg76c0p5im1qag4xpv4v98r5slkhvyxy9r1ibnyga22ica"; depends=[ggplot2 R_utils rChoiceDialogs RColorBrewer shiny shinydashboard tm wordcloud XML]; }; + edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; + edfReader = derive2 { name="edfReader"; version="1.1.1"; sha256="1si123kn66z2h8rrp5ck6hbjp11q0p3ja2h7xim4sqglbwca3fjw"; depends=[]; }; + edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; + edgar = derive2 { name="edgar"; version="1.0.8"; sha256="1sy4v3nw66z96mbgqfx2bkk085virilyrx03sqjp8p37v08x9yg1"; depends=[ggplot2 R_utils RColorBrewer tm wordcloud XML]; }; edgeCorr = derive2 { name="edgeCorr"; version="1.0"; sha256="19n67yc58ksin7xydrnfsyyw7fqawm5xli67cz4lv4wb62w6r6ld"; depends=[]; }; edgeRun = derive2 { name="edgeRun"; version="1.0.9"; sha256="0d5nc8fwlm61dbi00dwszj1zqlij4gfds3w1mpcqnnfilr2g3di1"; depends=[data_table edgeR]; }; edgebundleR = derive2 { name="edgebundleR"; version="0.1.4"; sha256="0pajr95qqppk2m4l7rfi46rll32z8a7lmq0vmb3p8n0aks5ajn1n"; depends=[htmlwidgets igraph rjson shiny]; }; editrules = derive2 { name="editrules"; version="2.9.0"; sha256="14mfa8flkym2rx9n7bq9icc9fsrk3szib3amx5l0008rxll9qnxm"; depends=[igraph lpSolveAPI]; }; - edmr = derive2 { name="edmr"; version="0.6.3.1"; sha256="1avb4gnw8s635yyn3sh20pmppsnz39s7r1pr8ggdc61ca1mkh2mk"; depends=[data_table GenomicRanges IRanges mixtools S4Vectors]; }; edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.1"; sha256="09y63xj3gqrz66mym20g4pmfwrb0wnc2n67692hnqq8dz31q7p3i"; depends=[lasso2 MASS mvtnorm rgl]; }; - eegAnalysis = derive2 { name="eegAnalysis"; version="0.0"; sha256="1lrwjbhm5fnf5fhyyga2b21j2snnmj3zfvfxfkvgsbdnzr3qxaxb"; depends=[e1071 fields splus2R wmtsa]; }; + edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; + educineq = derive2 { name="educineq"; version="0.1.0"; sha256="0qd6kvcy280glv3q6lcrawmnsfvp90as95chgi3hav0yj2dpakn6"; depends=[flexsurv ineq]; }; + eechidna = derive2 { name="eechidna"; version="0.1"; sha256="17z3nay7dcys5hwfmm7wgsidz6pim97xlw8hlyh5bns57s10nwx7"; depends=[dplyr ggplot2 ggthemes plotly shiny shinyjs tidyr]; }; + eefAnalytics = derive2 { name="eefAnalytics"; version="1.0.6"; sha256="07wpz8zlgkbzkhmv569w7rnz3i830391arrh17sg2gc4fx9h1559"; depends=[geoR lme4 metafor mvtnorm]; }; eegkit = derive2 { name="eegkit"; version="1.0-2"; sha256="10dksmc5lrl0ypifvmmv96xnndl2zx191sl79qif0gfs3wq3w4s0"; depends=[bigsplines eegkitdata ica rgl]; }; eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; }; - eemR = derive2 { name="eemR"; version="0.1.2"; sha256="1mcvn5hjqwr8hgp3rdyxr7lh7x35rjza530grd3ys9vfnsn4k44q"; depends=[dplyr fields ggplot2 pracma R_matlab readr stringr tidyr]; }; - eeptools = derive2 { name="eeptools"; version="0.9.1"; sha256="0rgal6a5jjl572dqzc4zwmcqjsa12x8mv99c63bfmczp11f5hjmn"; depends=[arm data_table ggplot2 maptools memisc vcd]; }; - effects = derive2 { name="effects"; version="3.0-7"; sha256="055ws22k10vkcrbqvchdjnpmnklnk77wqx3rn7lyyry38bfn6xwn"; depends=[colorspace lattice lme4 nnet]; }; + eemR = derive2 { name="eemR"; version="0.1.4"; sha256="15b612z3h4alqv34wz28mgkg9m31r872pxbxayzqinf0pam8x08y"; depends=[dplyr fields pracma R_matlab readr rlist stringr viridis]; }; + eeptools = derive2 { name="eeptools"; version="1.0.0"; sha256="009ygzdqlvff4gichigy38878x60iqs4gr31ddrgildbrpq38hrd"; depends=[arm data_table ggplot2 maptools memisc vcd]; }; + effectFusion = derive2 { name="effectFusion"; version="1.0"; sha256="1nx61n4lgnj6wh4arqm62p9xwxqvz4g7bs4b5k3ybkhmh6ns9v5l"; depends=[bayesm cluster ggplot2 MASS Matrix]; }; + effects = derive2 { name="effects"; version="3.1-2"; sha256="1fwkz6z3rya4qn476w9vni15rfvjp2ix87qk0naszn3n1k8bf0l0"; depends=[colorspace lattice lme4 nnet]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; - effsize = derive2 { name="effsize"; version="0.6.1"; sha256="1b26ngy5n1yh2ry3vwkz3x497xw5wxbv7iywlk5j368rlb97sjbj"; depends=[]; }; + effsize = derive2 { name="effsize"; version="0.7.0"; sha256="113afdf1w1q75alc4i5i8l3ljsdsfn22l8cszljrpgp420csbzhv"; depends=[]; }; efreadr = derive2 { name="efreadr"; version="0.1.1"; sha256="1fkifml8g7hgg3qb19b9ljljzx9sbbpnb9xa18mvkxgmbw41qsy7"; depends=[dplyr ensurer magrittr readr]; }; ega = derive2 { name="ega"; version="1.0.1"; sha256="02mbadv505jz6nk1yp9xl12c9l9wnwpl5bajfbhgs837pdca438g"; depends=[ggplot2]; }; egcm = derive2 { name="egcm"; version="1.0.8"; sha256="1mrbm0yzqw344fzgcbwc6bgdn8fv8id80jnfp3jaqjfslfhlpzx7"; depends=[fArma ggplot2 MASS tseries TTR urca xts zoo]; }; - eggCounts = derive2 { name="eggCounts"; version="0.4-1"; sha256="16prkcmpfjl1lab8m9hm0sfbdlh94ds3wi6ra9n2wnrpdn32fl20"; depends=[actuar boot coda]; }; + eggCounts = derive2 { name="eggCounts"; version="1.3"; sha256="1yak67k1c13rx6ghm78585k2rdsgg9ajr3zaihjk8widavb3m23g"; depends=[BH boot coda numbers Rcpp RcppEigen rstan StanHeaders testthat]; }; egonet = derive2 { name="egonet"; version="1.2"; sha256="1f0fbqyk2ilmhirxvf1iwgfappi5r7807ag77r89lbaf5jq8akl0"; depends=[sna]; }; - eha = derive2 { name="eha"; version="2.4-3"; sha256="1dfilgw9m4m78ny3fd89nl8f9c9y5z5bnj912hpbfff3v5yfm3iq"; depends=[survival]; }; - ei = derive2 { name="ei"; version="1.3"; sha256="1vx34mwh0hf9nbkzw4kw35z88bdp4mbgnylj6vcy4jql1q8i4yxf"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix rgl sp tmvtnorm ucminf]; }; - eiCompare = derive2 { name="eiCompare"; version="1.6"; sha256="0fn4mgjhlc8ys7xjwmv2awwwbr963p0d685rfpmvxbszzbfkb06s"; depends=[cubature data_table eiPack ellipse foreach mnormt msm mvtnorm plotrix plyr R_utils tmvtnorm ucminf]; }; + eha = derive2 { name="eha"; version="2.4-4"; sha256="1sp1v3jmidj4ynjq7q7y28j9f483yhbzaz1jnxjc4hqk8398cxii"; depends=[survival]; }; + ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; + eiCompare = derive2 { name="eiCompare"; version="1.7"; sha256="128wvfsvzf84rkvk3bnailn2k4qf5iq5r7hnrxlamajia526ky31"; depends=[cubature data_table eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils tidyr tmvtnorm ucminf]; }; eiPack = derive2 { name="eiPack"; version="0.1-7"; sha256="1cxk31bj012ijm85sf6l4rjrwayw94j2d6aav8p9g1f0raha2s6y"; depends=[coda MASS msm]; }; eigeninv = derive2 { name="eigeninv"; version="2011.8-1"; sha256="18dh29js824d7mrvmq3a33gl05fyldzvgi8mmmr477573iy9r30g"; depends=[]; }; eigenmodel = derive2 { name="eigenmodel"; version="1.01"; sha256="0p9n28x5gg46nszzd2z9ky5fhv6qa070673i1df6bhjh962aqgaf"; depends=[]; }; @@ -3959,142 +4891,198 @@ in with self; { eive = derive2 { name="eive"; version="2.1"; sha256="1vazl5dnrvljd07csy9rjs4302w09h94i411gffg9fvxn70km7qg"; depends=[Rcpp]; }; eiwild = derive2 { name="eiwild"; version="0.6.7"; sha256="1fp4kvlmcjjnzn2a5cmlzaf6y5q6cdbbi2nmvjyqc4y1bmwh3srf"; depends=[coda gtools lattice]; }; elasso = derive2 { name="elasso"; version="1.1"; sha256="0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2"; depends=[glmnet SiZer]; }; - elastic = derive2 { name="elastic"; version="0.6.0"; sha256="1la9099ddhhnv713nhjlia9mali36y6xznbciqn3k91bml3b1am0"; depends=[curl httr jsonlite]; }; + elastic = derive2 { name="elastic"; version="0.7.8"; sha256="0cji7nh6ghjx6di9mw103hyj2am5x75f2lpi0csswbv4r3mslirr"; depends=[curl httr jsonlite]; }; + elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; elasticnet = derive2 { name="elasticnet"; version="1.1"; sha256="1x8rwqb275lz86vi044m1fy8xanmvs7f7irr1vczps1w45nsmqr2"; depends=[lars]; }; + elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.0"; sha256="0hw2pwfh6k8q1646cprg3d84acwgw5bi7vmp7wrnxkxg7npz5pyz"; depends=[httr jsonlite]; }; elec = derive2 { name="elec"; version="0.1.2"; sha256="0f7ahrjb52w8a8l5v00xla6z9afpz2zrckl9v04xalp34snhdwan"; depends=[]; }; elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; + electionsBR = derive2 { name="electionsBR"; version="0.2.0"; sha256="1mcnmrnjkb9qwnbh79kfl90dqji2imq9s9jsx6h8d5ccmjfdmzl7"; depends=[dplyr magrittr]; }; + elementR = derive2 { name="elementR"; version="1.2"; sha256="030ljdk8qbvv81bjr1pxg597mq1i22fpjzqdcrbrgl1c508ms2l2"; depends=[abind devtools gdata gnumeric lmtest R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2]; }; + elevatr = derive2 { name="elevatr"; version="0.1.1"; sha256="0dwq748f4nfz41j6jc5v7l4gdrwkjrfqmivkiz799yq0pql9djar"; depends=[httr jsonlite prettyunits progress raster ratelimitr rgdal sp]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; + elhmc = derive2 { name="elhmc"; version="1.0.0"; sha256="0xjl43xa0qw0hwdx73vv8cl1gyd5srdhpcpkap3wbnka4c75wpgj"; depends=[emplik plyr]; }; elliplot = derive2 { name="elliplot"; version="1.1.1"; sha256="1sl85kyjpxiw0gs3syhlhfrci03fl054py7m24xln5vk07665vbp"; depends=[]; }; ellipse = derive2 { name="ellipse"; version="0.3-8"; sha256="0ibz1qvf1qbb5sigyhpxb8hgip69z3wcimk3az1701rg2i64g3ah"; depends=[]; }; - elliptic = derive2 { name="elliptic"; version="1.3-5"; sha256="0hi0r3z6f5yq53v6ii4z35nws2gc00xkk0dncll0sf5nshcj8fl5"; depends=[MASS]; }; + elliptic = derive2 { name="elliptic"; version="1.3-7"; sha256="1bzd5x0yph76jh59ljl875grm52s8xpnmbgww1jjxx0hgkv7938g"; depends=[MASS]; }; elmNN = derive2 { name="elmNN"; version="1.0"; sha256="129r6d3qa48gqvqxks53hdmyk3jjakddsj5fwj91kqq0hkm34kyd"; depends=[MASS]; }; elrm = derive2 { name="elrm"; version="1.2.2"; sha256="0wz0l703v0iyp7nswdmh65n0cy3a7rfvyxd795a6nzk3nich8bfg"; depends=[coda]; }; - emIRT = derive2 { name="emIRT"; version="0.0.6"; sha256="1nl7xri4dv8vxpfckkk0j1xlipacjkkd2n8hklb11fjjmmwm6rhd"; depends=[pscl Rcpp RcppArmadillo]; }; - embryogrowth = derive2 { name="embryogrowth"; version="6.2"; sha256="1l4xh7ay8jwf0qpp37171hmx06l2lwmy0x2gj8gzwdf30b29ldm5"; depends=[deSolve HelpersMG polynom]; }; + emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; }; + embryogrowth = derive2 { name="embryogrowth"; version="6.4"; sha256="13mh7sh30q1zz4pqg4gwqsky172c0kklypv8n0432dkhmcv14543"; depends=[deSolve HelpersMG polynom]; }; emdbook = derive2 { name="emdbook"; version="1.3.9"; sha256="09xbdyw8a4pvrsg3ryr8drby0njy4avc5wsjj4ffibdaicpchy69"; depends=[bbmle coda lattice MASS plyr]; }; + emdi = derive2 { name="emdi"; version="1.0.0"; sha256="0mldd0b8mh4q72r968kc2lyy97abkw1b7sm50za7ip3m2khzcrj8"; depends=[FNN ggmap ggplot2 gridExtra HLMdiag maptools moments MuMIn nlme openxlsx parallelMap reshape2 simFrame]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.6"; sha256="1kzmxs224m6scmk8gg5ckx5c7is99hwgwv28yl26hnrbkm59skyh"; depends=[]; }; - emil = derive2 { name="emil"; version="2.2.3"; sha256="004s1l5fv6cjrp7l10hx57yfsbfx3lj6km58idmj18yqy9j194a1"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; + emil = derive2 { name="emil"; version="2.2.6"; sha256="182grlb90nsqs17mi09srzlrflf3kzaj5swcgfdyalhlmsgrfrnd"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; - emojifont = derive2 { name="emojifont"; version="0.3.2"; sha256="0jb08mhxn3b060dnncbmn4lwd0xawbaj5laskpc9sr3i26cicxk8"; depends=[proto showtext sysfonts]; }; - emov = derive2 { name="emov"; version="0.1"; sha256="1jzssxk7c26ylfb70p9s631bz63fgvrqc105p7536n0kgxy21f7b"; depends=[]; }; + emojifont = derive2 { name="emojifont"; version="0.4.0"; sha256="1g4bibrzjjgw3swzly590p9c1zipddzr8bgfydcqcbsqigzwvpj8"; depends=[ggplot2 proto showtext sysfonts]; }; + emon = derive2 { name="emon"; version="1.3"; sha256="025pl4biwncwb5cfpm0mb1r7wjv6akg1qkzz0bfnbp44sl58kfsc"; depends=[MASS mgcv]; }; + emov = derive2 { name="emov"; version="0.1.1"; sha256="04w0bjyxvfb4ky573byp7j9b7x4gqycr5pgpnsl6rzag00zsf45a"; depends=[]; }; empiricalFDR_DESeq2 = derive2 { name="empiricalFDR.DESeq2"; version="1.0.3"; sha256="0h2mcdw4v3ac6dn0s4z37l4sdzbi12sxrnn0f0gc9z207dyyf6w3"; depends=[DESeq2 GenomicRanges]; }; - emplik = derive2 { name="emplik"; version="1.0-2"; sha256="1sx8hsvv36idraji2vic6x025wp41bg4p73zqp2d716wmhgdkwgj"; depends=[quantreg]; }; + emplik = derive2 { name="emplik"; version="1.0-3"; sha256="0b52383m2djdcg9b1a7r10k5pkzljz6dalvbg2gg962ckvpndb11"; depends=[quantreg]; }; emplik2 = derive2 { name="emplik2"; version="1.20"; sha256="0qdsfmnvds01qa4f112knv905k0fzccrqj9fwaqrqcy48cigm8pd"; depends=[]; }; + emuR = derive2 { name="emuR"; version="0.2.1"; sha256="0lfgv2lbzp8l6f51mdfx6y0dj26w74ych924mlbpi53vm3sqa266"; depends=[base64enc data_table DBI dplyr httpuv jsonlite MASS RSQLite stringr uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-15"; sha256="1rp7q7zs8b49jzdkbzm4s1g8554h41hcabf4d78k9jhhys2z28g2"; depends=[mvtnorm]; }; enRich = derive2 { name="enRich"; version="3.0"; sha256="1ni2hkw0pq0mjjqd11qqrc3lbzyif84ljh9zrn2yil1qk2882r1n"; depends=[]; }; enaR = derive2 { name="enaR"; version="2.9.1"; sha256="1ryxzrdq9f88bvkyf6vdg61vfcjw1mj4dzzj8kliaf0h3ygzyaw1"; depends=[gdata MASS network sna stringr]; }; + encode = derive2 { name="encode"; version="0.2"; sha256="0sv881rpbfq1843f6bfa54jlj8ayrznyqxa6j4ngpx7ynyj84qwx"; depends=[]; }; endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; }; - endorse = derive2 { name="endorse"; version="1.4.1"; sha256="0xyi2cq4k4xa8kr717i4njl6rgjf5z99056jbhp2rbzfyy4sw61d"; depends=[coda]; }; - energy = derive2 { name="energy"; version="1.6.2"; sha256="008yf4r6546mzk9q515zliqxyjx6w0z19g5wlarg7f4lrzsmqiaw"; depends=[boot]; }; - english = derive2 { name="english"; version="1.0-1"; sha256="1413axjp2icj9wwnkz3vl4gvrwlgmjpc2djzv5bllbnc4a4dgj24"; depends=[]; }; - enigma = derive2 { name="enigma"; version="0.2.0"; sha256="0a45fp9lmxrdwpa7y3sfbgcijw5ss2fz7j2r7qnc0ask1x4yfqr4"; depends=[httr jsonlite plyr]; }; - enpls = derive2 { name="enpls"; version="1.1"; sha256="0vwl714w441c6wv9jnmyfzjd055ydia6qvwv6vrmnfasv3q5ny7z"; depends=[doParallel foreach pls]; }; + endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; + endorse = derive2 { name="endorse"; version="1.5.0"; sha256="0nyrcbrq8c5q2h45g1iz4n845kf3lvcwsj9j9ngkma17vbqf91hl"; depends=[coda]; }; + endtoend = derive2 { name="endtoend"; version="1.0"; sha256="0x8f6h0mznmncqdwvsp2f0x524g5clgvk64qflf373lyn6h1v0ap"; depends=[]; }; + energy = derive2 { name="energy"; version="1.7-0"; sha256="1g4hqi6mgsnd1w4q7dd2m40ljh2jdmvad91ksbq9fscnrqpvji1x"; depends=[boot Rcpp]; }; + energyr = derive2 { name="energyr"; version="0.1.1"; sha256="1mid5f8l6v55pjzfx304a303mkn9b5r3jzmjl2fi2pz4v2jsdw04"; depends=[RgoogleMaps]; }; + english = derive2 { name="english"; version="1.1-1"; sha256="09g4srg9wkmr0w9yssp491g0fkripwlhp790mjwanb03wbvz8g2d"; depends=[]; }; + engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; + enigma = derive2 { name="enigma"; version="0.3.0"; sha256="0ld3jhxrpyrhjklwif4jf1rn9ykx218pqzn9bfl0qdxr6cr4hhwy"; depends=[crul jsonlite plyr tibble xml2]; }; + enpls = derive2 { name="enpls"; version="5.7"; sha256="1c5brjddbaw4y23zpdaybkkgh4i2nsv5n5cvyv0jqi18qhx2s7rz"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichvs = derive2 { name="enrichvs"; version="0.0.5"; sha256="0x91s03hz1yprddm6mqi75bm45ki3yapfrxmap7d4qc0hi06h22k"; depends=[]; }; - ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.2"; sha256="0cfasrs1paz60na8by9zk0c5jc48l9djvn6c64ygjl1rapz389d4"; depends=[chron]; }; + enrichwith = derive2 { name="enrichwith"; version="0.0.2"; sha256="08kzj805mnxg23b3q5ayj8fp66qf5maiky1prv8mgxyays8yv4dl"; depends=[]; }; + ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.3"; sha256="1iscg03v691cyfma3fs6xnj9chf5arlg61bggg2wmkczp7gnsi3g"; depends=[chron]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.7"; sha256="0g5qzdic5jvgn6wv7zh0jnz8malfgfxn26l7lg30y96vcmi4hk54"; depends=[chron ensembleBMA]; }; + ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; - entropart = derive2 { name="entropart"; version="1.4-5"; sha256="0fmwzwydqb9g4qyd7inp9v6vfwrziqp31720vxincq39lka187w2"; depends=[ade4 ape EntropyEstimation geiger vegan]; }; + entropart = derive2 { name="entropart"; version="1.4-6"; sha256="0qvxwqg8fypc2q7a75s7ngqx5ga409p1iw1fdxp84xwdvgdcw07l"; depends=[ade4 ape EntropyEstimation geiger vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; - enveomics_R = derive2 { name="enveomics.R"; version="1.0.1"; sha256="0p8zh45fvprx7zc6yc2c0k5n8ycsxcm052zlnyambw89g3dr6ix4"; depends=[fitdistrplus modeest sn]; }; - enviPat = derive2 { name="enviPat"; version="2.1"; sha256="1fy0afpvbv55bvbw2isaywi11svwag78007dr28xypd6lm4hfwym"; depends=[]; }; - enviPick = derive2 { name="enviPick"; version="1.4"; sha256="1jcjaa1kx6c3775k11ydn6sww0jg7kmmi8ikrk56q8j3wsbdhgyi"; depends=[readMzXmlData shiny]; }; + enveomics_R = derive2 { name="enveomics.R"; version="1.1.1"; sha256="0vz4cz52dx8r7zkgb3d8w2716g0g23rb638sf2b6asbfp2h2w5f6"; depends=[fitdistrplus investr modeest sn]; }; + enviGCMS = derive2 { name="enviGCMS"; version="0.1.1"; sha256="1wvanngizif7yx91f15v5mgs0dib01g440f4nvi0iid2hzx9ls4q"; depends=[mixtools rcdk xcms]; }; + enviPat = derive2 { name="enviPat"; version="2.2"; sha256="1cf1h4v05riivjwil4167sncdxzgxf3r4snx1imjb6s4msx67ibi"; depends=[]; }; + enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; + envirem = derive2 { name="envirem"; version="1.1"; sha256="07mlyaqjwwrh9dbc78ik61wrrpg344fg3rb12l6v6hzn04yp26pz"; depends=[raster RSAGA]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; - epanetReader = derive2 { name="epanetReader"; version="0.3.1"; sha256="01f9q8i57ym5dvhn2jqkdlr1id8cv63yasbzmbhgl03bfgsibaya"; depends=[]; }; + epanetReader = derive2 { name="epanetReader"; version="0.4.0"; sha256="0pa44wp8cq8xf2835k3gch0m40s7l7r9f0scyizk54nv6cdq88cx"; depends=[]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.2.2.0"; sha256="1f9kifjgdwxs7c236nsr369ij71rj7l5ady88h4n5p5pjw2h451a"; depends=[foreign MASS nnet survival]; }; - epiR = derive2 { name="epiR"; version="0.9-74"; sha256="1k5095lp7sby0xsdwki16g0yd22k06aiqr2xrgwss5i1vc08laid"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="0.9-79"; sha256="08gfy4ri4haxi82zs4xngrabimvajlrbw1s1dqwl0gfjz4zdklby"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.3"; sha256="0d0087sa8lqw35pn7gdg2qqzw3dvz57sgavymwl1ybcj5d4lsbyk"; depends=[]; }; - epifit = derive2 { name="epifit"; version="0.0.6"; sha256="0k72w9x81l7a6wn4syz0qjaijlhfaflkffd1cjz7szv6cfnl97s2"; depends=[MASS]; }; + epidata = derive2 { name="epidata"; version="0.1.0"; sha256="1lp6hnjzga787abq94k8v48wlikpp5hj1xwmxc8nj1imyr4r8a4h"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; + epifit = derive2 { name="epifit"; version="0.1.2"; sha256="1i1ngb5kh03gyx1702fwav3dc3mqry1wjzc7ry36hdw0ngawid34"; depends=[MASS]; }; epinet = derive2 { name="epinet"; version="2.1.7"; sha256="10mqc3xy24mjbk9np5mp41216hj6yc9jqxl3ybgysmd80y3qgf39"; depends=[network]; }; + episensr = derive2 { name="episensr"; version="0.8.0"; sha256="0ryn3p7vg4dq976ncm48i1kx42sanmzyyslvq0wiqijkl0172x19"; depends=[boot ggplot2 gridExtra plyr reshape trapezoid triangle]; }; + episheet = derive2 { name="episheet"; version="0.2.0"; sha256="15c4xbam9b60xkkgmbswj4raln49hk43pxp2l75a7j1wykgkif95"; depends=[dplyr ggplot2 magrittr tidyr]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; + epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitools = derive2 { name="epitools"; version="0.5-7"; sha256="163sibnbihdsnkxf313fr8n8rh5d64dwjagv95vhhzr87f21sw22"; depends=[]; }; + eply = derive2 { name="eply"; version="0.1.0"; sha256="18q40n06gbqg5cs0jknlxk5x0pwcbjnfb27ysmbf76s826qdc8gh"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.5-1"; sha256="1r19cvcqf39yf09n3znbdy3dsr7z96yx6zib6031mqqdsxaav5qd"; depends=[elasticnet graph irr lassoshooting Matrix Rgraphviz survival]; }; epr = derive2 { name="epr"; version="2.0"; sha256="1xqc0jhgdwwvilqpljxzpzz3wx30kigy09sxvzcfvsjmxyyvflqy"; depends=[car]; }; + epxToR = derive2 { name="epxToR"; version="0.1-0"; sha256="1nvm9cr12lvh877xxiyii0gbfs6r0px76f5qlpn3pdlgj59msn3s"; depends=[httr XML]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; - equate = derive2 { name="equate"; version="2.0-3"; sha256="0y37nxily7zjx00z7h4vmpn8cs7bl3aravhjkjz9l6y0fv0rc5vv"; depends=[]; }; - equateIRT = derive2 { name="equateIRT"; version="1.2-3"; sha256="1v8hk50b132j5r2wg508cdww7slgwcik7y2zn7dy56qq2plb4mkz"; depends=[mirt statmod]; }; - equivalence = derive2 { name="equivalence"; version="0.7.1"; sha256="1nm4s92acin5c2qnvgsafx7c10jyxmqgh33ciq271ycciwc4idy3"; depends=[boot lattice PairedData]; }; + equSA = derive2 { name="equSA"; version="1.0.0"; sha256="1yq8f1svh8cg9pgharnb5ijxf692rm2avjvd6xabsv8jid25618l"; depends=[huge igraph mvtnorm XMRF ZIM]; }; + equate = derive2 { name="equate"; version="2.0.6"; sha256="0fkgz4747wf2n1sfkskpbp20zdmxvykqhncr7a8wl5lp314r48x3"; depends=[]; }; + equateIRT = derive2 { name="equateIRT"; version="2.0-1"; sha256="07kyy0adg42vzg26ssfwy5hiwggymbkkpvyczhzch4113lipz6pd"; depends=[mirt statmod]; }; + equivalence = derive2 { name="equivalence"; version="0.7.2"; sha256="170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79"; depends=[boot lattice PairedData]; }; + erah = derive2 { name="erah"; version="1.0.5"; sha256="00vygdrngbp53wip2x6dni3ygwax309i9si3gyqkxxbbkpv24b7i"; depends=[caTools HiClimR igraph ncdf4 nnls osd quantreg Rcpp signal XML]; }; erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; erer = derive2 { name="erer"; version="2.5"; sha256="0wgzd7r63d20vghmbilqn1p5033i5p31asya1gzwlipgyfxmqp0b"; depends=[lmtest systemfit tseries urca]; }; - ergm = derive2 { name="ergm"; version="3.5.1"; sha256="1myn7vhvwvf443im58f2vwnq26asmybhwjk9fv77qs5ac5y594x6"; depends=[coda lpSolve Matrix network robustbase statnet_common trust]; }; - ergm_count = derive2 { name="ergm.count"; version="3.2.0"; sha256="0qrldigkygr8k8v3njy0pclgv7z64dazknpf0m567i1nz8715yhy"; depends=[ergm network statnet_common]; }; + ergm = derive2 { name="ergm"; version="3.6.1"; sha256="1gjl1gil4vkcwrbb1fcri3jkdqy1m3bqqinw2g3fnv69m2k38szh"; depends=[coda lpSolve MASS Matrix network robustbase statnet_common trust]; }; + ergm_count = derive2 { name="ergm.count"; version="3.2.2"; sha256="1zg07vm5y6n6r687sbdy5hcinsircm4zzkx5w4849s9kwjlnpn0b"; depends=[ergm network statnet_common]; }; + ergm_ego = derive2 { name="ergm.ego"; version="0.3.0"; sha256="1152g9zz2wach0hbj27knxficvhf062alqa0wpj6nyqj2vsgnchh"; depends=[coda ergm network RColorBrewer statnet_common]; }; ergm_graphlets = derive2 { name="ergm.graphlets"; version="1.0.3"; sha256="0xk45ialjckvjs96k19skk7imilcahgyzfwc74h6yand5q3mg6fz"; depends=[ergm network statnet_common]; }; + ergm_rank = derive2 { name="ergm.rank"; version="1.0.1"; sha256="0k5ffqxn9fspbg82j2cmrcyav3nqjk7cnsq48xwy9i3z3vaq704k"; depends=[ergm network statnet_common]; }; ergm_userterms = derive2 { name="ergm.userterms"; version="3.1.1"; sha256="0pvklvyxi7sjc5041zl8vcisni0jz1283gyjw5mhas9bl47g1cwc"; depends=[ergm network statnet_common]; }; ergmharris = derive2 { name="ergmharris"; version="1.0"; sha256="1bfijhsljlykb94wi25lbpv35zkmgqpmgzmxcq98gjvzbn5j9pdq"; depends=[]; }; erp_easy = derive2 { name="erp.easy"; version="1.0.0"; sha256="0md4l48qb2z6c527ir1dwc51z8yw1jq7yx85fxzzg0wh1vzafp1z"; depends=[plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; - errint = derive2 { name="errint"; version="0.1"; sha256="1qv997cb1ndny9k74gg996yyl11dkk5wxklpnh9qr5wdkdc77hhk"; depends=[rootSolve VGAM]; }; + errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; + errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; + errorlocate = derive2 { name="errorlocate"; version="0.1.2"; sha256="1qlwdvy7i62hpnfrryzmqwmygxa8mjc7q92g6k5n9r2r179q7h09"; depends=[lpSolveAPI validate]; }; esaBcv = derive2 { name="esaBcv"; version="1.2.1"; sha256="0hgjcdbiy1a71vsb2vcyp0xmhy6wi4nlh1sqsfb2vxckc95i9i21"; depends=[corpcor svd]; }; - estimability = derive2 { name="estimability"; version="1.1-1"; sha256="049adh8i0ad0m0qln2ylqdxcs5v2q9zfignn2a50r5f93ip2ay6w"; depends=[]; }; + esaddle = derive2 { name="esaddle"; version="0.0.3"; sha256="04imppwls6a485kdfwykk4s0pyxas3i92ccghi780ys29y0nggmy"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; + esc = derive2 { name="esc"; version="0.2.0"; sha256="0ihkmfw6h7lk3a1fzrgjpfz5dh8rfvpr1b7ijljnv7s8pa4yi5na"; depends=[readr]; }; + esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; + estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; }; + estimability = derive2 { name="estimability"; version="1.2"; sha256="13b80bpnbrarazjvnpnk91ljjsqgfm2fm3gy66aj09cmmsmv199h"; depends=[]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; - etasFLP = derive2 { name="etasFLP"; version="1.3.0"; sha256="1qh8s9ikd2lpchpp4h9z4zvcd9l2gi15dg0i54nxg9acn92yn3hi"; depends=[fields mapdata maps rgl]; }; + etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; + etl = derive2 { name="etl"; version="0.3.5"; sha256="1qxzfcfpa50k6n70nii0qh6lr4rsbc3f2vhp6hj720pc8yg3r0mb"; depends=[DBI downloader dplyr lubridate readr stringr]; }; etm = derive2 { name="etm"; version="0.6-2"; sha256="0sdsm6h502bkrxc9admshkrkqjczivh3av55sha7542pr6nhl085"; depends=[lattice survival]; }; - etma = derive2 { name="etma"; version="1.0-8"; sha256="07vixcanjfwbgf0sv6fs7hsl7qhr171lwhkb0hs2j9mvx3f3by9l"; depends=[]; }; + etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; + etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; + etseed = derive2 { name="etseed"; version="0.1.0"; sha256="1kqbhvryqzmckk91ynn68yd7msqdsl6h818r164180f10flszr37"; depends=[httr jsonlite R6]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; + eulerr = derive2 { name="eulerr"; version="1.1.0"; sha256="00pblvyfhqcvbjwjkq237b7kj99vvkyclam9mpmgrd72wx6ryzr7"; depends=[assertthat lattice latticeExtra Rcpp RcppArmadillo]; }; euroMix = derive2 { name="euroMix"; version="1.1.1"; sha256="13ia6j0iwxhcfv17b5dsq1pk7v1kxaq6njxilxq0hvd57hv0b2a8"; depends=[Familias forensim paramlink]; }; - eurostat = derive2 { name="eurostat"; version="1.2.21"; sha256="1fjknxmf6jzhnrckmldy8gzxlyvy8p3cy9lv2ky8l10ln1ccfbjl"; depends=[httr jsonlite tidyr]; }; - eva = derive2 { name="eva"; version="0.1.3"; sha256="0w425qf1k4h0dif1aav6kid58fyc7v71hz03xb9fbwrqpghwj7xb"; depends=[]; }; - evaluate = derive2 { name="evaluate"; version="0.8.3"; sha256="08d6164m9wqf9qq6yh1s9a0qxwqzqpsq7312hilzy79gxf9gixzr"; depends=[stringr]; }; + europepmc = derive2 { name="europepmc"; version="0.1.2"; sha256="1wdxmhcq7zz0x9rrddp7pswj6pbsfdgwrrlm6lgsv7cvs6cmh1na"; depends=[dplyr httr jsonlite plyr urltools xml2]; }; + europop = derive2 { name="europop"; version="0.3"; sha256="01c31p82r1paxqq209078av9fzkvrl3wp9hz8s79iwf4hlqxbiw6"; depends=[]; }; + eurostat = derive2 { name="eurostat"; version="2.2.43"; sha256="1h3vx0lf6kqvvhcj1ichzsvqhjmskcpvxd37hym6cwwgkkmxrzk3"; depends=[classInt httr jsonlite RColorBrewer readr sp stringi stringr tibble tidyr]; }; + eva = derive2 { name="eva"; version="0.2.4"; sha256="03jsiz6bkavwxpgllxaw8czahmm2rh5h8hhk5j7i9clcjx244vvj"; depends=[EnvStats Matrix]; }; + evaluate = derive2 { name="evaluate"; version="0.10"; sha256="0mwna7rjyrmc76651a1fm7c76ippdsc2wsp3sj3iwb1c73mvlqv1"; depends=[stringr]; }; + evclass = derive2 { name="evclass"; version="1.1.0"; sha256="1h0lqf6wixsbcs4hnpzsjhsj8fifh9z5r90zcwscj1vk7aqf9cwg"; depends=[FNN]; }; + evclust = derive2 { name="evclust"; version="1.0.3"; sha256="0cd0a8w0ixd9ilcqlxiaql4l2r49qrqnllb9qpg3xgnlxka3yb5m"; depends=[FNN limSolve Matrix R_utils]; }; evd = derive2 { name="evd"; version="2.3-2"; sha256="0n81plbw2p83c10y6a6hvqkxcbfqjdc41p02zyklbcafga1m4gdy"; depends=[]; }; evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; }; + event = derive2 { name="event"; version="1.1.0"; sha256="1nq34bz9dsixidym3n255vmap3gjx9nfk8pc5s7w026faf96dr2v"; depends=[rmutil]; }; eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; }; events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; eventstudies = derive2 { name="eventstudies"; version="1.1"; sha256="13l2yhmlpiid9r3njnmvja231l00ym7gvwfbv0m9fk2k5j6gm5id"; depends=[boot xts zoo]; }; + evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; }; evir = derive2 { name="evir"; version="1.7-3"; sha256="1kn139vvzdrx5r9jayjb4b0803b0bbppxk68z00gdb50mxgvi593"; depends=[]; }; evmix = derive2 { name="evmix"; version="2.6"; sha256="1rc52mqmzl05n5n1lr990czqgpq9h2x8shnv6s7hvr8896kjasjm"; depends=[gsl MASS SparseM]; }; evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; - evolqg = derive2 { name="evolqg"; version="0.2-2"; sha256="1s2zifbzk1mxydbhfw0b4bwhaqqryxdkgnhygd9nyr82physrn8h"; depends=[ape coda depth ggplot2 magrittr Matrix mvtnorm phytools plyr Rcpp reshape2 tidyr vegan]; }; + evolqg = derive2 { name="evolqg"; version="0.2-5"; sha256="11n0gxkxhg1d2ziwbipqvyccgnsrzm3mk4xy2d7nxn662q1yl2ah"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; + evoper = derive2 { name="evoper"; version="0.3.0"; sha256="1vbzlskb4l3mnxv8vkdqqrifldhcq053pfy927c0y7h5sfkfajra"; depends=[boot deSolve futile_logger ggplot2 plot3D reshape rrepast]; }; evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; }; - evtree = derive2 { name="evtree"; version="1.0-0"; sha256="0i37lkdfzvgby98888ndd5wzxs7y11sxf9mh6pqpqgwif05p4z3i"; depends=[partykit]; }; - exCon = derive2 { name="exCon"; version="0.1.14"; sha256="0wm111hy2i3ipf48826r2r5a61s5sjz96p54hwipwpy3j0ahzdsv"; depends=[jsonlite]; }; - exact2x2 = derive2 { name="exact2x2"; version="1.4.1"; sha256="1a4cg8j8kdgwkj27qza6xm5x16m9sb2vczb1b9im8k4pas6v6jpk"; depends=[exactci ssanv]; }; + evtree = derive2 { name="evtree"; version="1.0-2"; sha256="1izcv93irbi5zffyyzag2gcaf8zrhp2lkf3h68gb2jpf5x6wdw64"; depends=[partykit]; }; + exCon = derive2 { name="exCon"; version="0.2.1"; sha256="0rblghg29azzbf8wq7wsypf9jprcy9a2063fhwn0lpxqqgbyzw8v"; depends=[jsonlite]; }; + exact2x2 = derive2 { name="exact2x2"; version="1.5.2"; sha256="12m3kaxdrf4bsw7lrylk15nimhy4sgmjbnlqm684y2kyvii9yrg0"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-28"; sha256="1n6rr0wax265y9w341x7m2pqwx3cv8iqx1k5qla29z8lqn4ng1nd"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-1"; sha256="1mhigk1nzd24qhzgd1j96zlf38dr96c1y5jbmy6lz2sw7g4mmvgm"; depends=[ssanv]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exams = derive2 { name="exams"; version="2.1-0"; sha256="13ca4r151424fprc1km58dxbhssvnjn6y6pa2m7wl95v796k20z9"; depends=[]; }; - excursions = derive2 { name="excursions"; version="2.1.1"; sha256="1snrfy1m03mf54v3k9r51zhbjsx05zhzf94rnf4mzyq15fdp22lq"; depends=[Matrix sp spam]; }; + exams = derive2 { name="exams"; version="2.2-0"; sha256="14w0m8jnnpbg153l0gq5lixw68ml3qvnnjyl4dbaiccm2as9spbn"; depends=[]; }; + excursions = derive2 { name="excursions"; version="2.2.2"; sha256="1f6vvv33205lj6hsmmhx3q82mkhh0shzyk5hrwzf2nh1cn61w1x0"; depends=[Matrix sp]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; exifr = derive2 { name="exifr"; version="0.1.1"; sha256="0cxi8rcig03qwahdilawg4j3i9a8sv8sxgy0a68pxxmg556dwk0j"; depends=[foreach plyr]; }; - expands = derive2 { name="expands"; version="1.6.1"; sha256="0hx7ggfxlb96dglm1290nn95hhrjjnjc8w39g0s9wq4lrdwfz8a7"; depends=[ape flexmix matlab mclust moments permute rJava]; }; + exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; + expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; + expands = derive2 { name="expands"; version="1.7.2"; sha256="1yyic21ng5wj61na3d3lw6r2y8iclfhhbkkcrkjy01mx3pp6iiac"; depends=[ape flexmix matlab mclust moments permute rJava]; }; expectreg = derive2 { name="expectreg"; version="0.39"; sha256="1mxhv6phc3lgp0zz20wszx4nr3by9p6492wcb0x8wn8p8p1sy1b3"; depends=[BayesX mboost quadprog]; }; experiment = derive2 { name="experiment"; version="1.1-1"; sha256="07yaf5k5fpymz2yvr52zbbi60g0v84qryvqqjq3sjq2mb1fjfz1p"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; - explor = derive2 { name="explor"; version="0.2"; sha256="0xlsbj6slp0i4nynhdy2c6vnc8phxkgswg32s0w7cm79v8aag3z1"; depends=[dplyr DT ggplot2 scatterD3 shiny shinyBS tidyr]; }; - expm = derive2 { name="expm"; version="0.999-0"; sha256="1mlkp5d0hbm9nw0lmm7fbwl4b00633bpsg0yshwv0w3fw6dh75xb"; depends=[Matrix]; }; + expint = derive2 { name="expint"; version="0.1-3"; sha256="1gysdlr752f6caanhh1j6jhnplxb73qslink6n4fsv2qdxz0pfvf"; depends=[]; }; + explor = derive2 { name="explor"; version="0.3.1"; sha256="11qc96m0wapsmw9i1z4vgcjwnb5g8zr8mc3m1diiipb9hld4yn7x"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; }; + exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; + expm = derive2 { name="expm"; version="0.999-1"; sha256="1d526dn1k9py1hiadnlp4a5dmxcfyfssh57f0v7hfy3gr9qmhn7a"; depends=[Matrix]; }; expoRkit = derive2 { name="expoRkit"; version="0.9"; sha256="0raf0m2nfbdbd1pc4lincyp8y8lgn3bfi4hn0p04plc5p40l1gvc"; depends=[Matrix SparseM]; }; expoTree = derive2 { name="expoTree"; version="1.0.1"; sha256="0hj1x4niqp0ghqik3mz733nc3zpnhyknrdpzpj6y2rfia2ysdiz8"; depends=[ape deSolve]; }; expp = derive2 { name="expp"; version="1.1"; sha256="13zbhkkcshqrpln5gsa051d390q9ij97lawsdbd5j7fj9hxm9pwh"; depends=[deldir rgeos sp spdep]; }; + exprso = derive2 { name="exprso"; version="0.1.8"; sha256="1k3is8f4yfzzkcak9fmm2nk8vi85b0na5r96f3yjbc9qb0av9vb8"; depends=[affy Biobase cluster e1071 kernlab lattice MASS mRMRe nnet pathClass plyr randomForest ROCR sampling]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; + expss = derive2 { name="expss"; version="0.5.5"; sha256="1qpj6grmbld8q75kk8rj8l15vm4gqnpq8vbbc81415w3dw2phz84"; depends=[foreign]; }; exptest = derive2 { name="exptest"; version="1.2"; sha256="0wgjg62rjhnr206hkg5h2923q8dq151wyv54pi369hzy3lp8qrvq"; depends=[]; }; exreport = derive2 { name="exreport"; version="0.4.1"; sha256="0vj60rchhrc5q6x1kv7b95fcmh2a5qynli2w54rrrw1nx54xm8c2"; depends=[ggplot2 reshape2]; }; exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; }; - extRemes = derive2 { name="extRemes"; version="2.0-7"; sha256="1dghhmwph65vhq2pnn461cxs1qrfm3kq8dqsilpfkm30jvblv8dv"; depends=[car distillery Lmoments]; }; + extRemes = derive2 { name="extRemes"; version="2.0-8"; sha256="0pnpib3g2r9x8hfqhvq23j8m3jh62lp28ipnqir5yadnzv850gfm"; depends=[car distillery Lmoments]; }; extWeibQuant = derive2 { name="extWeibQuant"; version="1.1"; sha256="08dzw5xfgqx0c7ac632c5mg5jmjjw7wwpcr4c9lvz5rv72ykh2rh"; depends=[]; }; + exteriorMatch = derive2 { name="exteriorMatch"; version="1.0.0"; sha256="0cdfj1n502iws1g03rk7x0c18zyazqf3vci9kjm6lrv4j2qwrvip"; depends=[]; }; extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; }; extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; }; extraBinomial = derive2 { name="extraBinomial"; version="2.1"; sha256="0qmvl35f7n78kghszwyaz4wzbswqy4p98c3b6alzrc2ldsq6pq5z"; depends=[]; }; + extraDistr = derive2 { name="extraDistr"; version="1.8.3"; sha256="0xrjcwvmmz5g68cm2q6imkjm3v6mb6xnkmf8svqkg1825hd18g34"; depends=[Rcpp]; }; extraTrees = derive2 { name="extraTrees"; version="1.0.5"; sha256="1rvvp2p9j8ih8fid1n17606pa23bjg3i2659w1l6w0jkb1p23zcx"; depends=[rJava]; }; extracat = derive2 { name="extracat"; version="1.7-4"; sha256="1dply8sx9r9vshi5dycxs7bchf5g33qbq7w6i5w830glfy0lk3i5"; depends=[colorspace data_table ggplot2 hexbin plyr reshape2 scales TSP]; }; extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; extrafontdb = derive2 { name="extrafontdb"; version="1.0"; sha256="115n42hfvv5h4nn4cfkfmkmn968py4lpy8zd0d6w5yylwpzbm8gs"; depends=[]; }; + extremeStat = derive2 { name="extremeStat"; version="1.3.0"; sha256="1hj78ks4wfb0awkpg4qyrhy7f9rz0rxl9ddgsas3730snyfhspx6"; depends=[berryFunctions evd evir extRemes fExtremes ismev lmomco pbapply RColorBrewer Renext]; }; + extremefit = derive2 { name="extremefit"; version="0.2.0"; sha256="1zzwn6r6zmxzaiq4h5jclz4ys24j8ffzq194hkw72rzblyzj8gcz"; depends=[]; }; extremevalues = derive2 { name="extremevalues"; version="2.3.2"; sha256="0pyngxljdnjwnbwcb0gmxcirv70r1s1wyq4m1wm5rprpdj8v9xil"; depends=[gWidgets gWidgetstcltk]; }; - extremogram = derive2 { name="extremogram"; version="1.0.0"; sha256="196y63q9hnkf3hgizcz8a40wcmwmrm5yfail9sjh3kb40sb3nipi"; depends=[boot MASS]; }; + extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; + eyelinker = derive2 { name="eyelinker"; version="0.1"; sha256="1lwpm247czqm26zvv5c6lkhdxpp4svszfw74g9ys9vwvwhry9c15"; depends=[intervals magrittr plyr readr stringi stringr]; }; eyetracking = derive2 { name="eyetracking"; version="1.1"; sha256="0ajas96s25hjp3yrg42hp78qjhl1aih04mjirkskx32qsyq5hfpv"; depends=[]; }; eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.6"; sha256="0azfakn5kh80bvywqf52wy3c0q5k13zcasniggjf273f5z1415pn"; depends=[broom dplyr ggplot2 lazyeval tidyr zoo]; }; - ez = derive2 { name="ez"; version="4.3"; sha256="1ypdp52fy382p14hri7my98wpjpl13lp9mdfk5lndiafmd20zl3j"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; - ezec = derive2 { name="ezec"; version="0.1.0"; sha256="157gnwikr1w5zfh2nbnvnhw7wq62b56yjhx5i63y8ds86vzhngvy"; depends=[dplyr drc]; }; + ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; + ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; }; ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; }; - ezknitr = derive2 { name="ezknitr"; version="0.3.1"; sha256="0786bp8k3jpzdk7a98m7203cghavs9zh114418fkwnlrjnwkhsna"; depends=[knitr markdown R_utils]; }; + ezknitr = derive2 { name="ezknitr"; version="0.6"; sha256="060a2175zh1nhzmqgz1mpj2c6721n5w5bv695jj4rbl2s2b2h4qj"; depends=[knitr markdown R_utils]; }; ezsim = derive2 { name="ezsim"; version="0.5.5"; sha256="03x75vmf75qsmk4zb09j7xrb11w31rpfwd3dvv12nwjgndh9bnld"; depends=[digest foreach ggplot2 Jmisc plyr reshape]; }; - ezsummary = derive2 { name="ezsummary"; version="0.1.9"; sha256="0fqg0slxg760km2gfd534xkl3g19p8imi7a8k2nmzac6lp92irj7"; depends=[dplyr reshape2 tidyr]; }; + ezsummary = derive2 { name="ezsummary"; version="0.2.1"; sha256="16rwg1h7gs7mnkmbwfb273fy1pwdq9ng6l4ad00anpmilqcck5ng"; depends=[dplyr tidyr]; }; fANCOVA = derive2 { name="fANCOVA"; version="0.5-1"; sha256="034m2mmm6wmsjd41sg82m9ppqjf4b1kgw5vl2w7kzqfx0lypaiwv"; depends=[]; }; fArma = derive2 { name="fArma"; version="3010.79"; sha256="1byxyy4afl1gq58r1cmc5p6frdr9rljr1x3pdnc8nj8rr65lkg72"; depends=[fBasics timeDate timeSeries]; }; fAsianOptions = derive2 { name="fAsianOptions"; version="3010.79"; sha256="1w9ph3rz6cd7g275flzsnqxwd3r5xin6pkini8pbsi9s8hbqv3vl"; depends=[fBasics fOptions timeDate timeSeries]; }; @@ -4106,7 +5094,7 @@ in with self; { fExoticOptions = derive2 { name="fExoticOptions"; version="2152.78"; sha256="0h58prj8nh340b0fxxkgg4bk25yxvb4f8ppq677hr12x8sysf1a8"; depends=[fBasics fOptions timeDate timeSeries]; }; fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.2"; sha256="1r4qkhf7alasbwjz910b0x4dlzm72af06kv7v2vwyzvf3byn21c5"; depends=[fCertificates Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3010.81"; sha256="0bzgnn0wf7lqhj7b2dbbhi61s8fi2kmi87gg9hzqqi6p7krnz1n5"; depends=[fBasics fGarch fTrading timeDate timeSeries]; }; - fGarch = derive2 { name="fGarch"; version="3010.82"; sha256="08q452pasvjhsg2ks6c52lqg276hlbdwk0vh25xya2bw2bgbqy99"; depends=[fBasics timeDate timeSeries]; }; + fGarch = derive2 { name="fGarch"; version="3010.82.1"; sha256="0n5mzqc7lj7h63rf4nw4w3mics02gaf049c7m3bjfbp5cwwnf9pf"; depends=[fBasics timeDate timeSeries]; }; fICA = derive2 { name="fICA"; version="1.0-3"; sha256="0gbmjg1az3v413xgdzkjinfy5wri8963w38jnk0p0h2zd8gdkpfs"; depends=[JADE Rcpp RcppArmadillo]; }; fImport = derive2 { name="fImport"; version="3000.82"; sha256="07yqppl8sbfa0x9k4n7hh6hcgyxpcvlk74hhylib4nzqm70bn0sq"; depends=[timeDate timeSeries]; }; fMultivar = derive2 { name="fMultivar"; version="3011.78"; sha256="115hqbbxsdjs5v2rhalg8vz0m5lyg8ppjjqmbq1x21jdnbg6l0fl"; depends=[cubature fBasics mvtnorm sn timeDate timeSeries]; }; @@ -4117,67 +5105,89 @@ in with self; { fSRM = derive2 { name="fSRM"; version="0.6.4"; sha256="1n91gzjx9r3r3xl400w38miva0b69c0f23h2056kq9p1bax2nm86"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; }; fTrading = derive2 { name="fTrading"; version="3010.78"; sha256="0qakjxnr5nslw06ywlj65m3w7pjgn5hixxc2rnqhvvvmjpdxybz7"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3010.78"; sha256="04nwwazd8jvzds6p4njzq4wpcsrvvvs0y9z8v8r402myd4856ssm"; depends=[fBasics timeDate timeSeries urca]; }; + fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; + face = derive2 { name="face"; version="0.1-2"; sha256="06rpjr588yh5v4z33j4lc1m5r1jj2zsaxfmx1h6h2z4cqlgrvxax"; depends=[Matrix matrixcalc mgcv]; }; + factoextra = derive2 { name="factoextra"; version="1.0.4"; sha256="1lzf99184sbc9x3skp8hp8cjlj0w8mvm4vnwj03smfgm9sh01874"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; }; factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; }; - factorplot = derive2 { name="factorplot"; version="1.1-1"; sha256="1l8pabf32dr12l7b4dgv5jaxpsjymgdxc51miv72zczrx8adc7da"; depends=[multcomp nnet]; }; + factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; + factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; + factorstochvol = derive2 { name="factorstochvol"; version="0.8.3"; sha256="0dcasii1dfkmng29a7d4k6kyy9lyrbcr06gqyg61h07xf2j3qwla"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; - falcon = derive2 { name="falcon"; version="0.1"; sha256="0yas8a8nqdp03s77k5z1xlyz59gapyx68pz0mf6i2snjwpgai59v"; depends=[]; }; - falsy = derive2 { name="falsy"; version="1.0.1"; sha256="1n2b2h7w7p3vib4vgb9vadd3c07dx12vz5gm8bawbdx7llh2pr24"; depends=[]; }; + fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; + falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; + falconx = derive2 { name="falconx"; version="0.1"; sha256="0sxsvx6nppys9sgmrxi79f709kfhafckd22nmn4ql7vf7p0z1fs7"; depends=[]; }; fame = derive2 { name="fame"; version="2.21"; sha256="15pcgc67qcg6qkgssbfissicic317v60jsybp86ryqvzqg70cqx3"; depends=[tis]; }; - fanc = derive2 { name="fanc"; version="1.25"; sha256="12isxkrrkph1jk88q3bnc27alixjgxjnfkcyx3rmc6s2hqw9vyiv"; depends=[Matrix]; }; - fancycut = derive2 { name="fancycut"; version="0.1.0"; sha256="1l81jk0jskawzy6q4li6awznq4rqs281b449zccfh0992qy45lk1"; depends=[]; }; + fanc = derive2 { name="fanc"; version="2.2"; sha256="1gdkxb2ay0lyldjpg4s2fbavjxl4q1bf9q438csqa4vzl5ywv2w8"; depends=[Matrix]; }; + fancycut = derive2 { name="fancycut"; version="0.1.1"; sha256="1vnxn5zl1j8209dyrwq3919hivab09f0jq4v9h7v0wlqk1hy5ich"; depends=[]; }; fanovaGraph = derive2 { name="fanovaGraph"; version="1.4.8"; sha256="1da7yskh2gn4arrrnalkl3izqyyrm0yf0il4v2izs7di7qlw3m6v"; depends=[DiceKriging igraph sensitivity]; }; fanplot = derive2 { name="fanplot"; version="3.4.1"; sha256="1xj1hdz3i9c9wdx7ryiqag69khh3544v4474ilxxiyahxg2r6m45"; depends=[]; }; faoutlier = derive2 { name="faoutlier"; version="0.6.1"; sha256="02a93jswrq10r09kawxzvdb795bs0sym0yllb30697f9gd7bvyqz"; depends=[lattice lavaan MASS mirt mvtnorm sem]; }; far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; + farff = derive2 { name="farff"; version="1.0"; sha256="1w3mi0vsw7mpqznaf3rnzf7va7ax07n5rrpm2hnjh0q25lsv55hk"; depends=[BBmisc checkmate readr stringi]; }; farsi = derive2 { name="farsi"; version="1.0"; sha256="0y14f86bccwjirdx33383wa605y7l7lr0w7ygvg8r7f7izkv7r3n"; depends=[]; }; fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; fastGHQuad = derive2 { name="fastGHQuad"; version="0.2"; sha256="0yv3wdyj7hs1gr3rq08k520v0ldmv5zzng709xjx2kchhwhmy8ah"; depends=[Rcpp]; }; - fastGraph = derive2 { name="fastGraph"; version="1.0"; sha256="05qbysc3arwg4hh0hxw84n4c004mndz8mgzbgsky4cb035bp99fa"; depends=[]; }; + fastGraph = derive2 { name="fastGraph"; version="1.1"; sha256="1vbi5yssnh8hcbmrq1r437vpvj8hqd3vc8wmcy0nbyvnmyjaxkvb"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; + fastHorseshoe = derive2 { name="fastHorseshoe"; version="0.1.0"; sha256="1f9glz7zcarn4jdr6ssy41d2g6b6cqcry9mqchcq6zx576qn2irs"; depends=[lars Rcpp RcppArmadillo]; }; fastICA = derive2 { name="fastICA"; version="1.2-0"; sha256="0ykk78fsk5da2g16i4wji85bvji7nayjvkfp07hyaxq9d15jmf0r"; depends=[]; }; + fastJT = derive2 { name="fastJT"; version="1.0.2"; sha256="1k59qvc43adh07lyz1dznghqd6nbmnx5pciyg8da89yy3zw2dvgx"; depends=[Rcpp]; }; + fastLSU = derive2 { name="fastLSU"; version="0.1.0"; sha256="0clsd4kphlw62n7skqd0ralz3ymgxyvzn8bn06ljiwjqalzyhzhz"; depends=[]; }; fastM = derive2 { name="fastM"; version="0.0-2"; sha256="0q5dz47sqj6d4r3k6l6q34l5ajb8fjbf7xam75scp0mg3czswnfn"; depends=[Rcpp RcppArmadillo]; }; fastR = derive2 { name="fastR"; version="0.10.2"; sha256="0xh3pfcln8xp42zvq3kv03xf9kc5gqafnhdnq6r4rx7xhl9n5dw0"; depends=[lattice mosaic mosaicData]; }; - fastSOM = derive2 { name="fastSOM"; version="0.9"; sha256="03501d5289lrlr4qcgxciz160hqc6nhqb9ab266fr132fkbiv4id"; depends=[]; }; - fastclime = derive2 { name="fastclime"; version="1.2.5"; sha256="12k7bkq4gkkyh8lr2whmi73mzcy7wmfzwgi20kli7r4g39n3a1kv"; depends=[igraph lattice MASS Matrix]; }; - fastcluster = derive2 { name="fastcluster"; version="1.1.16"; sha256="0x2prrsnqi5iqx23ki6y2agndjq8058ph6s703i4avrqi1q1w1q8"; depends=[]; }; + fastSOM = derive2 { name="fastSOM"; version="1.0.0"; sha256="1x4kxys7mxlxz7cfbjig44za8m8p19xgzcs5y2wn9320sx8b0wc0"; depends=[]; }; + fastclime = derive2 { name="fastclime"; version="1.4.1"; sha256="0zcir8r11b2hxr9vvkmvxlzmhfcaxbr0wbjy86ysr912mp8fs9i3"; depends=[igraph lattice MASS Matrix]; }; + fastcluster = derive2 { name="fastcluster"; version="1.1.22"; sha256="006k9isra5biyavqwci61avladw19mhp6kmkjj3777rl1r4r8b9z"; depends=[]; }; + fastcmh = derive2 { name="fastcmh"; version="0.2.7"; sha256="0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl"; depends=[bindata Rcpp]; }; fastcox = derive2 { name="fastcox"; version="1.1.1"; sha256="1a5i0ragl0r6p29iamkn04igakiwyysykfbs2p6ybgy8pfdq69sv"; depends=[Matrix]; }; fastdigest = derive2 { name="fastdigest"; version="0.6-3"; sha256="02csl261v7nassi5119ygw6jglm8q6rssg7lgyxzj73mkyilm832"; depends=[]; }; - fastmatch = derive2 { name="fastmatch"; version="1.0-4"; sha256="16gfizfb1p7rjybrfm57nb6hdm30iirbppva8p8xf8pndz35fjbs"; depends=[]; }; + fasteraster = derive2 { name="fasteraster"; version="1.0.4"; sha256="0xxfwgzf6xbk4sajchaz7wjppg6cs1vkb00wiwsqmjm2yr48yp0m"; depends=[Rcpp]; }; + fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; + fastnet = derive2 { name="fastnet"; version="0.1.1"; sha256="1rqr9cc5xnz3pqjhakp52xk0m8c8dld50vm29blr8s6gw0spp7j8"; depends=[doParallel foreach igraph]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; - fasttime = derive2 { name="fasttime"; version="1.0-1"; sha256="1yfxj7k781ks4bx45bmmg1zkfzz7s027h393a0l5h6i5g1z7b81d"; depends=[]; }; + fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.2"; sha256="1xqr4azc5gsr7kcm8qzwjpjy72w1b111i61wbm35vns9r38a6cxz"; depends=[kinship2 multgee]; }; + fauxpas = derive2 { name="fauxpas"; version="0.1.0"; sha256="1mi19zrgkx25g8j1f948n0ps27dn0rr2jqnhf15w73lpsjbwvi54"; depends=[httpcode R6 whisker]; }; favnums = derive2 { name="favnums"; version="1.0.0"; sha256="0siax7gjr25lpf1li3hawx6nviggs68c0lap2d9i38azlhvj891w"; depends=[]; }; + fbRads = derive2 { name="fbRads"; version="0.2"; sha256="1a65gfvizzm6psspcvlhkxligdf9j1whrgzkg7ww520lk3z8lnnd"; depends=[bit64 data_table digest futile_logger jsonlite plyr RCurl]; }; fbRanks = derive2 { name="fbRanks"; version="2.0"; sha256="17kbmdpgqkj2n951c6mdsrgfga6kiij1gqiw1wpi0q3fq4dlfrzx"; depends=[igraph stringr]; }; - fbati = derive2 { name="fbati"; version="1.0-1"; sha256="1ia67dg9b61kc14mjg7065v0c6n6agdp8cjdviasyzga00wzsyxj"; depends=[fgui pbatR rootSolve]; }; - fbroc = derive2 { name="fbroc"; version="0.3.1"; sha256="0a03b1cawi57qc1hjll4ja23hdxng7a633v5i29sdfwwggl1x6f8"; depends=[ggplot2 Rcpp]; }; + fbar = derive2 { name="fbar"; version="0.1.23"; sha256="1s23wiwyi9fj99zz8m8lhfz91cr8cnl92gb5wl2im691jvhvsr3s"; depends=[assertthat dplyr magrittr Matrix purrr ROI stringr tibble tidyr]; }; + fbati = derive2 { name="fbati"; version="1.0-1.1"; sha256="18k8a1m2znzzwmm25dbqnqzwbjxqz4rbjaw3z9affky7lzqgbg6l"; depends=[fgui pbatR rootSolve]; }; + fbroc = derive2 { name="fbroc"; version="0.4.0"; sha256="0bxi027iqqn50mn5nrlgx3z4qdlfkrq88s0dqyaxdl8rsrwp3d2w"; depends=[ggplot2 Rcpp]; }; fcd = derive2 { name="fcd"; version="0.1"; sha256="091wbf5iskcgyr7jv58wrf590qijb0qcpninmvm3xrwxi34r37xr"; depends=[combinat glmnet MASS]; }; fclust = derive2 { name="fclust"; version="1.1.2"; sha256="08gi7w74215r44qbysg233s5n8r905b66gsi4i66xf5r7zgaqsm0"; depends=[]; }; - fcros = derive2 { name="fcros"; version="1.4.1"; sha256="1q0mra1rkksbvavbrh4fp6knmmzwxgkwq9pikafp2m95ll9n4xii"; depends=[]; }; + fcros = derive2 { name="fcros"; version="1.5.2"; sha256="0ggg8jyzdsy5ihhs4hqjjj5v0sh1ln4n7380b1z1rafjfr9j2hwv"; depends=[]; }; fda = derive2 { name="fda"; version="2.4.4"; sha256="05rvrp29ip1wrk2wly06wdry2a2riynkx677nx5lg240lz12d6yw"; depends=[Matrix]; }; - fda_usc = derive2 { name="fda.usc"; version="1.2.2"; sha256="0xmfx40ibpb29rq7w4wrwhk5v16dj690qh7lv0gjigvnah1x8ih8"; depends=[fda MASS mgcv rpart]; }; + fda_usc = derive2 { name="fda.usc"; version="1.3.0"; sha256="1ask7g6mqwx8r1hd9vxzdl96z0gyqprswjpfcl7l5l3611m7mzdm"; depends=[fda MASS mgcv nlme rpart]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.4"; sha256="15m13v71kqxd9gqiymgfkq0dvcpzp05576m8zkg08m0k067ga9bd"; depends=[Formula Rcpp RcppArmadillo]; }; - fdaPDE = derive2 { name="fdaPDE"; version="0.1-2"; sha256="1bbrpricxrsixc0na4bgxclrzw6px0n2k05v1rbvbhsf2v1985jj"; depends=[RcppEigen rgl]; }; + fdaPDE = derive2 { name="fdaPDE"; version="0.1-4"; sha256="0n72x5h00n17yxjniim2qxz2phy1srk04dn6ivvc58k3x252fzkh"; depends=[RcppEigen rgl]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; - fdapace = derive2 { name="fdapace"; version="0.1.1"; sha256="102rhycn0yqkhkai1gdjc7jcf14im7hcvwa8xprffx5pkjigrydg"; depends=[Hmisc Matrix numDeriv plot3D pracma Rcpp RcppEigen]; }; - fdasrvf = derive2 { name="fdasrvf"; version="1.6.0"; sha256="1gzm862nbadrqamfyfdkynxdprrapkvc5n9jvp2vi6xxr6mm35ck"; depends=[doParallel fields foreach matrixcalc mvtnorm Rcpp]; }; + fdapace = derive2 { name="fdapace"; version="0.3.0"; sha256="1r4s20spsiags7z8hyvbvi9gxjxs4v8hfnrqya872shagk9iadyl"; depends=[Hmisc Matrix numDeriv pracma Rcpp RcppEigen]; }; + fdasrvf = derive2 { name="fdasrvf"; version="1.7.0"; sha256="0701ishhbxqjapin0c780m92pl02x4xvfvnsmydn0s6fqbxvxb1v"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; + fdcov = derive2 { name="fdcov"; version="1.0.0"; sha256="1m6yk6ngsxrz5mywp3vqhfjpkskrzgdyvqw7j8k2jgy4l0x04g5g"; depends=[corrplot matlab]; }; + fdq = derive2 { name="fdq"; version="0.2"; sha256="1iyplxm6niywfhmdnliy9nvvax1w6sijar8gpsj853cdfvn6kz5m"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.0"; sha256="1388a9hjbgblmhx5f3ddk16kigzsik9bvw179d1szk33kadfq2vp"; depends=[edgeR MCMCpack]; }; - fdrci = derive2 { name="fdrci"; version="2.0"; sha256="0smyl9phl02wghimawvff3h267w3h213jbqpka155i6cfzig9qjy"; depends=[]; }; + fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; }; - fds = derive2 { name="fds"; version="1.7"; sha256="164f2cbywph7kyn712lfq4d86v22j4y3fg5i9zyz956hipqv0qvw"; depends=[RCurl]; }; + fds = derive2 { name="fds"; version="1.7"; sha256="164f2cbywph7kyn712lfq4d86v22j4y3fg5i9zyz956hipqv0qvw"; depends=[rainbow RCurl]; }; fdth = derive2 { name="fdth"; version="1.2-1"; sha256="0rr9p2rns5ws111iqcicrlpcv47fkbxf161yxkkzfs2l3f1kgw14"; depends=[]; }; + feather = derive2 { name="feather"; version="0.3.1"; sha256="1q6dbkfnkpnabq8lb6bm9ma44cfcghx2lm23pyk3vg7943wrn1pi"; depends=[hms Rcpp tibble]; }; feature = derive2 { name="feature"; version="1.2.13"; sha256="07hkw0bv38naj2hdsx4xxrm2dngi6w3rbvgr7s50bjic8hlgy1ra"; depends=[ks misc3d rgl]; }; features = derive2 { name="features"; version="2015.12-1"; sha256="0rd8r1dxzddb6718hcm8ck7531c9wdrjfy8n67875bbxgzcvds61"; depends=[lokern]; }; - fechner = derive2 { name="fechner"; version="1.0-2"; sha256="0yhiqr0wlka3wq0nhwy9n02ax3x5b0y803iadbsr3xb54pxbfbqd"; depends=[]; }; + fecR = derive2 { name="fecR"; version="0.0.1"; sha256="0w31hr2j80ppzwgpnbalkgrxz7ijfr43yw7xk9rjkl8gw2nq4kg6"; depends=[lubridate plyr]; }; + fechner = derive2 { name="fechner"; version="1.0-3"; sha256="0bassigcipwlr2g8cdjh8jyhmb903k3hla9gnigcbz7qwzlfwa86"; depends=[]; }; federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; + feedeR = derive2 { name="feedeR"; version="0.0.7"; sha256="08mnfi96qkr1fj53ywqmya957swcwrfd3hqk0qaf2ni96sxxnp98"; depends=[digest dplyr lubridate RCurl XML]; }; fermicatsR = derive2 { name="fermicatsR"; version="1.4"; sha256="1587f67fypj22rdi1319zq765lcc9z518bzl1jr4lz6c8lrzfm9i"; depends=[]; }; ff = derive2 { name="ff"; version="2.2-13"; sha256="1nvd6kx46xzyc99a44mgynd94pvd2h495m5a7b1g67k5w2phiywb"; depends=[bit]; }; ffbase = derive2 { name="ffbase"; version="0.12.3"; sha256="1nz97bndxxkzp8rq6va8ff5ky9vkaib1jybm6j852awwb3n9had5"; depends=[bit fastmatch ff]; }; ffmanova = derive2 { name="ffmanova"; version="0.2-2"; sha256="0sw8br73mx552m4b5zi4qgjcrwxflmgsnvs4mlnxh8g2gaf5bx4j"; depends=[]; }; + ffstream = derive2 { name="ffstream"; version="0.1.5"; sha256="1q07b1wdyhbvn3784lwwz3jk591cz1rv1jnf36q1piscsb3v7ayk"; depends=[Rcpp]; }; fftw = derive2 { name="fftw"; version="1.0-3"; sha256="01nncrf2p0yq49lhd5aq4hvhp87f25r0x7siqnaldv5zq24krl30"; depends=[]; }; fftwtools = derive2 { name="fftwtools"; version="0.9-7"; sha256="1pd6ri9qh8rj5dahznl38l6haa1x6f2w91mxi83lic76lpddnxly"; depends=[]; }; fgac = derive2 { name="fgac"; version="0.6-1"; sha256="0paddf5a4w0g2i0ay7my0bppwh534d8ghy6csfxl5jj034xjgwkk"; depends=[]; }; @@ -4185,70 +5195,106 @@ in with self; { fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-5"; sha256="0gzwxzvf2y9p5rlfk862d7l1dm2sdwjhjpcb8p494cj4g1xshazg"; depends=[]; }; fheatmap = derive2 { name="fheatmap"; version="1.0.1"; sha256="1ir666zwlrw00c8pzm7np91n8qajc4w38pkmn2r12zpmcivqhvpk"; depends=[gdata ggplot2 gplots RColorBrewer reshape2]; }; - fields = derive2 { name="fields"; version="8.3-6"; sha256="0gnjwzi6rbvlhk0ragq12f0wzva25ncfy4llipmfl4zxz91px4dk"; depends=[maps spam]; }; - fifer = derive2 { name="fifer"; version="1.0"; sha256="0vbkks6y6pacgpiixm10fbfa34lmk5r9kwd30lfjf0g7r51fhvv9"; depends=[MASS xtable]; }; + fields = derive2 { name="fields"; version="8.10"; sha256="1vr0iil04jcqgsm2s3cgcldg8p4jc6avwwp0zrsdixbr9rgqcz20"; depends=[maps spam]; }; + fiery = derive2 { name="fiery"; version="0.2.2"; sha256="1dinlrxal5rm16xvfripj8l3q15yfxkgj2qn2hihf03k0pj50lb2"; depends=[assertthat future httpuv R6 stringi uuid]; }; + fifer = derive2 { name="fifer"; version="1.1"; sha256="1gcv8ns4c1y3pjmixdm16raa5h6jqmc3i4m37ahj97l720j1f2ya"; depends=[fields Hmisc MASS party plotrix randomForest randomForestSRC rpart xtable]; }; + fiftystater = derive2 { name="fiftystater"; version="1.0.1"; sha256="1nri9vsqif03xrmm3g5llasqm49hj169mgv046f2l0mh9vp0fqpc"; depends=[]; }; filehash = derive2 { name="filehash"; version="2.3"; sha256="1nvf7qbnn6vjz68303xdm190iq0nwmmghyydcb4amx1ckbgric33"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; - filematrix = derive2 { name="filematrix"; version="1.0"; sha256="17rkf9izhpz3nljv9s56fannd4v7dzsgk6igl7s9mkzmzn4fyp0g"; depends=[]; }; - filenamer = derive2 { name="filenamer"; version="0.2"; sha256="0f2xvqp75b8v59707z26y746vvag3f2mcykafqp5cy8cqrf7x61j"; depends=[]; }; + filematrix = derive2 { name="filematrix"; version="1.1.0"; sha256="1z1nlpmckmh96zfc17gkgagagzz84ih6sjy4b8vfv1nzfipprsfy"; depends=[RSQLite]; }; + filenamer = derive2 { name="filenamer"; version="0.2.1"; sha256="0xahzjgwfpyln6i2szr985csw11w8wwk644sgclwly9l2yqzsi3i"; depends=[]; }; + fileplyr = derive2 { name="fileplyr"; version="0.2.0"; sha256="15rxls0njd6j2vxdahf4fx2nxmsa3rc41812v3wlaqas99naaxxr"; depends=[assertthat datadr tibble]; }; + files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; financial = derive2 { name="financial"; version="0.2"; sha256="1v6jgs3rq57byin5mynslfjk3zrx91qz36558nn17mv6z0qsf10v"; depends=[]; }; + finch = derive2 { name="finch"; version="0.1.0"; sha256="0pqli6l049s9pdk0gphch1pw8i0f1fr3562akms1x7hvdkn9c0i9"; depends=[data_table digest EML plyr rappdirs xml2]; }; findpython = derive2 { name="findpython"; version="1.0.1"; sha256="0fa01znc9cckj4ay4zmwmssm2lkhmsw6h07y1pwgd6z1b2pj7bns"; depends=[]; }; - fingerprint = derive2 { name="fingerprint"; version="3.5.2"; sha256="042aycxs00rglqh2y27bjlwkk6z312gavli7g8xvqfx1lisijrjk"; depends=[]; }; - finiteruinprob = derive2 { name="finiteruinprob"; version="0.4"; sha256="0wcllbqkryll3v3fjb6k210pcgkskzrpa78gg8nda0jvkij11zb7"; depends=[numDeriv sdprisk]; }; - fishMod = derive2 { name="fishMod"; version="0.25"; sha256="0mg1bziz2ia406m4ilc7hw1bghrgdibm537hnlf9ffhfayjc4kid"; depends=[]; }; + findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; + fingerprint = derive2 { name="fingerprint"; version="3.5.4"; sha256="0raxsyni8kbq7q2sfkp4bx6mh8wdk9mxplzi4fbqcf78cxk9bla7"; depends=[]; }; + finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; + finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; }; + fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; }; fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; }; - fishmethods = derive2 { name="fishmethods"; version="1.9-0"; sha256="118w9zacrrvx0qgr4626kkw2v1kgmb644a518j9w4fqhvfiwd4mk"; depends=[boot bootstrap lme4 MASS]; }; + fishkirkko2015 = derive2 { name="fishkirkko2015"; version="1.0.0"; sha256="1s8vsf604rc6qk0gahn61p3q8p9dhsbq14wsmrin7icq2xgl3y81"; depends=[]; }; + fishmethods = derive2 { name="fishmethods"; version="1.10-0"; sha256="1sr5f1yg55qirk9afamb7nq142y7l5j93c04a6xyhmkrgf5kcs0p"; depends=[boot bootstrap lme4 MASS]; }; fishmove = derive2 { name="fishmove"; version="0.3-3"; sha256="1knbv087cg0czjcgdbrlpg69pp1dxb57b7ak5j1mcy7ay3a41a9h"; depends=[boot ggplot2 MASS plyr]; }; fit_models = derive2 { name="fit.models"; version="0.5-10"; sha256="06pj26dbnq6mf9wxinvjzwyn36656f66a4bmky36r7fzi92gf3d8"; depends=[lattice]; }; fit4NM = derive2 { name="fit4NM"; version="3.3.3"; sha256="0k2194521yby6xxi77bpjp6ywz8kpnzws217m7n0hw6xwz5mqj1g"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 tkrplot]; }; fitDRC = derive2 { name="fitDRC"; version="1.1"; sha256="1f6avw8ia9ks17zdagpmh6yvcmi53h5cvm0wwv9hsb92x5zfhxn9"; depends=[]; }; fitTetra = derive2 { name="fitTetra"; version="1.0"; sha256="0ia6wk4gicpmn6kclsd28p7v1npwfv2blagiz0cxzwfw3njv103g"; depends=[]; }; - fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.5"; sha256="0qdsk4zb5xrqpaba2j76iarh5jdpij4vl97b3z7v3yijx7w4fsgl"; depends=[httr RJSONIO stringr]; }; - fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-6"; sha256="17ip3qh07jgcklacv89r1g8a27cp7xpk4f61ps5v9affsn1vjmcg"; depends=[MASS survival]; }; - flacco = derive2 { name="flacco"; version="1.2"; sha256="0lwy9cl8xd11vr18hhyyq6kxcgsdqp7mvmvizw2rq2fkyw3k5nfa"; depends=[BBmisc checkmate]; }; - flam = derive2 { name="flam"; version="3.0"; sha256="0c3j382sa7szqrpd0j8vcg19p6yn18jphd55cbvl0g6z0z76y53p"; depends=[MASS Rcpp]; }; + fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.7"; sha256="1bam6hj3cqi5bw1zx4gkl62lzdy40pr3g7f6v36bwkczccasxrwr"; depends=[httr jsonlite stringr]; }; + fitcoach = derive2 { name="fitcoach"; version="1.0"; sha256="1nnd7g093qjlbyrdai78gpbs0xjqlfdjn1v786v7966rzp83xfkg"; depends=[caret dplyr gbm ggplot2 httr jsonlite plyr R6 reshape2]; }; + fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; + fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-8"; sha256="0h6b5zp5z2g87vz1zv4k7b0rl8rh17vs2ca0i2v583v0b4si7hz4"; depends=[MASS survival]; }; + fitplc = derive2 { name="fitplc"; version="1.1-3"; sha256="1l7s5adzindq24slbygmkyk17jh37hgv1pwa7bphsb997k5qk4fm"; depends=[car nlme]; }; + fitur = derive2 { name="fitur"; version="0.1.0"; sha256="1k4c6n36s324akscm0mkyw68hxmh52kh0l01kyw18mxlbr3d0rhq"; depends=[fitdistrplus]; }; + fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.1.0"; sha256="0fcc8rq745nsghp27dk0lgih90y4zx8hrzcvsn6ih786yv7qxhvl"; depends=[]; }; + fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; + fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; + flacco = derive2 { name="flacco"; version="1.3"; sha256="1kqr8a311d2kh4rgy176813vcai63qkz4x7snynj82jgmqfz2llq"; depends=[BBmisc checkmate]; }; + flam = derive2 { name="flam"; version="3.1"; sha256="12dkxisi56fg5720mh58jqrjvkqllqgzynafd44xalswkk4ahaak"; depends=[MASS Rcpp]; }; + flan = derive2 { name="flan"; version="0.3"; sha256="1ayba6gifxmvwn5mfh0zqgl1hbp5d9spl1bxc8w8zxvih4khw7w4"; depends=[lbfgsb3 Rcpp]; }; flare = derive2 { name="flare"; version="1.5.0"; sha256="03bq40lwwq49vvbarf37y7c3smm29mxqfxsc66gkg8l5pak4l38i"; depends=[igraph lattice MASS Matrix]; }; + flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; - flexCWM = derive2 { name="flexCWM"; version="1.5"; sha256="1q6nkw6al56wc53sj719c94iv20a9a82pq4s62jnb2flq1pwdaml"; depends=[adehabitat ellipse Flury MASS mclust mixture mnormt numDeriv statmod]; }; + flexCWM = derive2 { name="flexCWM"; version="1.7"; sha256="0kgvj3l4cscr1p3305mnz42km5i8280wrvxp317dif3pvq7iigi4"; depends=[ContaminatedMixt mclust numDeriv statmod]; }; flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; flexclust = derive2 { name="flexclust"; version="1.3-4"; sha256="1x9gyg69kb3wn02w885kl6hcwpf2ki66gzfayvc83jisrwxvdfvv"; depends=[lattice modeltools]; }; + flexdashboard = derive2 { name="flexdashboard"; version="0.4"; sha256="0zb0k4mph4d9rqq655dj8mma51r77v716xrpwj4ypgs66ni08c1l"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; flexmix = derive2 { name="flexmix"; version="2.3-13"; sha256="1i205yw3kkxs27gqcs6zx0c2mh16p332a2p06wq6fdzb20bazg3z"; depends=[lattice modeltools nnet]; }; - flexsurv = derive2 { name="flexsurv"; version="0.7"; sha256="1mwqbp89mhmplyii7if5jmlv8593i48pv5i2l15javh2p0rqdzz6"; depends=[deSolve mstate muhaz mvtnorm quadprog survival]; }; + flexrsurv = derive2 { name="flexrsurv"; version="1.3.3"; sha256="0dkm2fdr76k2l6b02r9gxqm585x243cddvj14rw1gck570z6grnf"; depends=[Epi matrixcalc orthogonalsplinebasis survival]; }; + flexsurv = derive2 { name="flexsurv"; version="1.0.0"; sha256="0lzcbfwxwvh7dm743mvmkz3d35z6gf0az4mn4x0sbv318j2bg0hr"; depends=[deSolve mstate muhaz mvtnorm quadprog survival]; }; + flifo = derive2 { name="flifo"; version="0.1.4"; sha256="1yilfnblarimc8mlvvwsgib5sxcfgvgsvgpyzddxb39g6fb7lffs"; depends=[bazar pryr]; }; flip = derive2 { name="flip"; version="2.4.3"; sha256="04zf2gnk5w57gxnlnh26pn1ir1wfrzxhfhchr33ghk7prhc7k4b8"; depends=[cherry e1071 Rcpp RcppArmadillo someMTP]; }; - flora = derive2 { name="flora"; version="0.2.7"; sha256="0kr8gx9ckklvfifbchiyzxvby0aww7gwvh4bfd0fh6svdrin6dly"; depends=[dplyr httr shiny]; }; + flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; }; + flock = derive2 { name="flock"; version="0.7"; sha256="1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"; depends=[Rcpp]; }; + flood = derive2 { name="flood"; version="0.1.1"; sha256="0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p"; depends=[copula evd magrittr TLMoments]; }; + flora = derive2 { name="flora"; version="0.2.8"; sha256="1asggrfp7i6z9p7lp1ab9i9i6xzz0qafxs03irpqig4pqw0qwm7d"; depends=[dplyr httr jsonlite]; }; flowDiv = derive2 { name="flowDiv"; version="1.0"; sha256="1xgg73gbhysss82faqxn25l494sjbi3j0ls0dj6znzll8bhlrkb1"; depends=[flowCore flowWorkspace vegan]; }; flower = derive2 { name="flower"; version="1.0"; sha256="1h2fvpjrvpbyrqb8hd51sslr1ibpwa7h9fiqy9anvf2yim5j11yq"; depends=[]; }; flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; }; - flowr = derive2 { name="flowr"; version="0.9.9.5"; sha256="02ilcx5kswk7c1f1sd2g5av0m0amzl3g9yhqrl0khpiighsybciy"; depends=[diagram params whisker]; }; - flows = derive2 { name="flows"; version="1.1"; sha256="05h4s0g9vcjwli96zlajkpi61bvdxcnzy7lcskn8z7qss3kl8wi8"; depends=[igraph reshape2 sp]; }; + flowr = derive2 { name="flowr"; version="0.9.10"; sha256="18mjshfg3827b26b8nz52pl04ph7n887vw0ym5fybjm8gy5wwpdg"; depends=[diagram params whisker]; }; + flows = derive2 { name="flows"; version="1.1.1"; sha256="0l152p17plkrbnrlis8rfr9ij406agckdxvnjsciilv6qwcync29"; depends=[igraph reshape2 sp]; }; flsa = derive2 { name="flsa"; version="1.05"; sha256="07z2b1pnpnimgbzkjgjl2b074pl9mml7nac2p8qvdgv7aj070cmh"; depends=[]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; - fma = derive2 { name="fma"; version="2.01"; sha256="1j5mvhbrdnkyj4svibpahnz7d4221nkhja5b7fnh68mbmil607fc"; depends=[forecast tseries]; }; - fmri = derive2 { name="fmri"; version="1.5-1"; sha256="0dla5w8x4njw2njryb35nqh4r31wdps9bl5wzab2grzl546wwmwm"; depends=[]; }; + fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; }; + fmbasics = derive2 { name="fmbasics"; version="0.1.0"; sha256="1nf3s59qjiylrr293dzrnrza6q7xywsgczyb1d07x85bb9gcxkih"; depends=[assertthat fmdates lubridate]; }; + fmdates = derive2 { name="fmdates"; version="0.1.2"; sha256="0j79a6dc9bxhfxki77fmvn36x73kgpqym1m46pj74jzyz32sb05h"; depends=[assertthat lubridate]; }; + fmri = derive2 { name="fmri"; version="1.7-2"; sha256="1ifp0fkmr0bj5vkg9vh0lk74f04fk0zc90vknmjmxd2hbdb5kh4r"; depends=[awsMethods metafor nlme]; }; + fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; }; fmsb = derive2 { name="fmsb"; version="0.5.2"; sha256="0y3sx4lmn05rwaywlyckl3l8ds21p6zjbbw47zqlh0kgcbiv1q1a"; depends=[]; }; fmt = derive2 { name="fmt"; version="1.0"; sha256="13gsywnyvf9zy5n644g2xyd60f92w2dp7vil2dncjvjcqsib22a0"; depends=[]; }; foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; + foghorn = derive2 { name="foghorn"; version="0.4.2"; sha256="0wskaky1jb9yqz0ds1hjrvdfdxdsmbfx730257z9xsyip1fwlic4"; depends=[clisymbols crayon curl dplyr httr lazyeval magrittr rvest tibble tidyr xml2]; }; + fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; + fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; }; fontcm = derive2 { name="fontcm"; version="1.1"; sha256="1z6b4qdgj5vhvjqj90sm1hp0fffi1vxzvq71p0flxybzyb7d15la"; depends=[]; }; + fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; }; foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; + forcats = derive2 { name="forcats"; version="0.2.0"; sha256="1mvwkynvvgz2vi8dyz11x7xrp53kadjawjcja34hwk1d89qf7g5m"; depends=[magrittr tibble]; }; foreach = derive2 { name="foreach"; version="1.4.3"; sha256="10aqsd3rxz03s1qdb6gsb1cj89mj4vmh491zfpin4skj1xvkzw0y"; depends=[codetools iterators]; }; - forecTheta = derive2 { name="forecTheta"; version="2.1"; sha256="04kmhf0f27v6fajly81xyp8lrrvz1l69kx9gdxgdki8vm0zcnx2z"; depends=[forecast]; }; - forecast = derive2 { name="forecast"; version="6.2"; sha256="0j4agcw11dzlwy90qqr2is0rhws73hphqsjfb4glw0min5vsw00v"; depends=[colorspace fracdiff nnet Rcpp RcppArmadillo timeDate tseries zoo]; }; + forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; + forecast = derive2 { name="forecast"; version="7.3"; sha256="02zckbxwb4b83kadk7nd5ybxanswq1ws4z5xzdyiss626pgzljp1"; depends=[colorspace fracdiff ggplot2 nnet Rcpp RcppArmadillo timeDate tseries zoo]; }; + forecastHybrid = derive2 { name="forecastHybrid"; version="0.3.0"; sha256="1j5mfmdi6ky6ssai3lv2x7n09i93hpl5r1068qlm32mijf4yylbs"; depends=[forecast ggplot2 reshape2]; }; + forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.1-1"; sha256="1rmar6qfiw9hszwqp988csvwsq8q72d39a2xmr9yq36llnbg6i5p"; depends=[Rcpp]; }; forega = derive2 { name="forega"; version="1.0"; sha256="0xf9almfikfkxq8mm09lzrvav2v5cg0avpz99i6h5i9qliix1q6r"; depends=[forecast Rcpp robfilter]; }; - foreign = derive2 { name="foreign"; version="0.8-66"; sha256="19278jm85728zb20800w6hq9q8jy8ywdn81mgmlnxkmrr9giwh6p"; depends=[]; }; + foreign = derive2 { name="foreign"; version="0.8-67"; sha256="1mcrm2pydimbyjhkrw5h380bifj1jhwzifph1xgh90asf3lvd1xd"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; - forestFloor = derive2 { name="forestFloor"; version="1.9.1"; sha256="1kg7w75a1l9sfp1bq1srlc11dp19znb1nk2lw64yab7hwna5zknr"; depends=[kknn Rcpp rgl]; }; + forestFloor = derive2 { name="forestFloor"; version="1.9.5"; sha256="09xwk42qkwq47bpybnxbr1flraadmxp7bp9r1ii1zvmcp3zgxqcl"; depends=[kknn Rcpp rgl]; }; + forestinventory = derive2 { name="forestinventory"; version="0.1.0"; sha256="1hd56w1lzq6mfsikvcxdyh1l51fhw5wy9fy99v48i1hy87qx7p3d"; depends=[plyr]; }; forestmodel = derive2 { name="forestmodel"; version="0.4.0"; sha256="1csw85zmj39zk3qr0238xjxj9qvp4fda62cqiliy5qm3a68kgpk3"; depends=[broom dplyr ggplot2 lazyeval]; }; - forestplot = derive2 { name="forestplot"; version="1.4"; sha256="0m6wrk2adfj82ggjigzisarzqlz59ffzdbiz1irf76wybivzggx6"; depends=[magrittr]; }; - formatR = derive2 { name="formatR"; version="1.3"; sha256="09fsd0z6nhksc1h921h8q28f87hr6d1q8d6dmpxphjylb9r5xmj4"; depends=[]; }; - formattable = derive2 { name="formattable"; version="0.1.5"; sha256="0kh3npzj42d0b21bbv9jidlkn9a8wldhg36ql5mgiiqyhva76qab"; depends=[htmltools htmlwidgets knitr markdown shiny]; }; + forestplot = derive2 { name="forestplot"; version="1.7"; sha256="0sxbh7chmy3aixvwks2mzzx0n6h9zkk6c4nsw3ihll213x8pph4q"; depends=[checkmate magrittr]; }; + formatR = derive2 { name="formatR"; version="1.4"; sha256="1fvynq0fj1r9grg9vvfdh5fl2riv6qki9f2rfpyvbvqq3xxpmi3f"; depends=[]; }; + formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.5.4"; sha256="1qs7ls757qvh5gdkx32zslgpx1a4zk2vf8bbgjdax02jmlyp2qrp"; depends=[operator_tools]; }; - fortunes = derive2 { name="fortunes"; version="1.5-2"; sha256="1wv1x055v388ay4gnd1l8y6dgvamyfvmsd0ik9fziygwsaljb049"; depends=[]; }; + fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; forward = derive2 { name="forward"; version="1.0.3"; sha256="0swn5ysp3f660kl9jpmkck9324j1g3yhj2hl238rfrcr5wihxifc"; depends=[MASS]; }; fossil = derive2 { name="fossil"; version="0.3.7"; sha256="188hyb3r1dnxkmqf2czh1kdzmk4mjc0v1kn1zml2yvxaxk7adsrz"; depends=[maps shapefiles sp]; }; fourPNO = derive2 { name="fourPNO"; version="1.0.3"; sha256="1354rlrq7a748430v9kp7m896z1xz43fggy0nzsh9wq5r9kc9az2"; depends=[Rcpp RcppArmadillo]; }; + fourierin = derive2 { name="fourierin"; version="0.1.2"; sha256="0pr7207w7hv6wjmmzfxwf584nnymg2jyxjb7003ljh2bdiqp1y7z"; depends=[Rcpp RcppArmadillo]; }; fpCompare = derive2 { name="fpCompare"; version="0.2.1"; sha256="0vva60xixlx6l8623qvj2sdn5w3gjscrv5g8hqmgir4f211lzg38"; depends=[]; }; + fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; fpc = derive2 { name="fpc"; version="2.1-10"; sha256="15m0p9l9w2v7sl0cnzyg81i2fmx3hrhvr3371544mwn3fpsca5sx"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; @@ -4256,126 +5302,156 @@ in with self; { fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.4-2"; sha256="03l5dqpqwwi5c8fwc2vissfawcsignai60h2zalknkibvk782dwq"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.6"; sha256="1cpb71yk1245j6qz4mqvpqc3s3lrmav4blp5wlxasjizn3ilwh66"; depends=[emg numDeriv]; }; - fractal = derive2 { name="fractal"; version="2.0-0"; sha256="17wz3c9f1l1rphzdn7j27j5nb1ll6j84f9ihk0z6fni41050szv7"; depends=[ifultools sapa scatterplot3d splus2R wmtsa]; }; + fractal = derive2 { name="fractal"; version="2.0-1"; sha256="1varigsw5chwz88dgipdg55fqfarvll3s7kcyqmhfm0wc7vvmz2q"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; }; fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; }; fractalrock = derive2 { name="fractalrock"; version="1.1.0"; sha256="15f4w8hq3d8khgq269669ri16qxhar9646w40cw7wzh79r9gpf00"; depends=[futile_any futile_logger quantmod timeDate]; }; fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; + fragilityindex = derive2 { name="fragilityindex"; version="0.0.8"; sha256="07d7rx2iymp3w1rmzd9n2r8ydjldxxfpp8a56pw6srlnjj4xi80a"; depends=[pbapply stringr survival]; }; frailtyHL = derive2 { name="frailtyHL"; version="1.1"; sha256="1xjdph0ixanf9w4b6hx6igfhkcp8h93sclrg0pgqgmbvm41lhb1x"; depends=[Matrix numDeriv survival]; }; - frailtySurv = derive2 { name="frailtySurv"; version="1.2.2"; sha256="00zi4lslcwgf5b8piaig6vh4gb8cnr4xcl425x0bw9hj9b1zsmq1"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; - frailtypack = derive2 { name="frailtypack"; version="2.8.3"; sha256="1kjqq8mhd85q6c2hnxljqphc0ksq6cnbrksnis4c1rx1wcwrwqdf"; depends=[boot MASS nlme survC1 survival]; }; - frair = derive2 { name="frair"; version="0.4"; sha256="1g52ykj1m9znpp0pvry7dnmhg4m73nbkw0bp31zl6pcsdgmxxqjr"; depends=[bbmle boot emdbook]; }; + frailtySurv = derive2 { name="frailtySurv"; version="1.3.2"; sha256="0qsq96p29rxlfkhbmg8cfqdnpzh8wq2nadpiim9d6l0bs20r51gl"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; + frailtypack = derive2 { name="frailtypack"; version="2.10.5"; sha256="1hlbbkagy1hy3yrlabq4r8rn0hzsyhabj0zfj6z37r4a3a0hp5fm"; depends=[boot MASS nlme survC1 survival]; }; + frair = derive2 { name="frair"; version="0.5"; sha256="1fdyvv75mgdwn5csi2wgy4cadw753q941jzpycvjfln77n9nixci"; depends=[bbmle boot lamW]; }; franc = derive2 { name="franc"; version="1.1.1"; sha256="0agrzdrgfw4a3jn6a2867rf99a87ngv6wi73ys2l7gr7mkpq54v5"; depends=[jsonlite]; }; frbs = derive2 { name="frbs"; version="3.1-0"; sha256="0ngvi7lg6aviwic8f4ya03khyzh3ksglpmsnrdjjznwj874y2wim"; depends=[]; }; freeknotsplines = derive2 { name="freeknotsplines"; version="1.0"; sha256="19zs42q9njknirdbrbnp8bv4vr32kd8wxmkqj0a0nh06i5fcx67r"; depends=[]; }; freestats = derive2 { name="freestats"; version="0.0.3"; sha256="0b18n8idap089gkmjknzzb94dvs2drpdqs0mrw7dqnacxgbbqwfj"; depends=[MASS mvtnorm]; }; + freesurfer = derive2 { name="freesurfer"; version="1.0"; sha256="0wsj5px7apfia55kajxhh5717sp6n1lh8wr1bdbk6v29cq4svvd6"; depends=[neurobase R_utils reshape2]; }; freqMAP = derive2 { name="freqMAP"; version="0.2"; sha256="02hpkqqrxifrr1cxn5brp166jwa8lgl1mcgmq7s8csrbbd900ziv"; depends=[]; }; + freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="1.0.4"; sha256="0flx4316q8m9v5zy8bxjp18a25p1vwq6wvfs81r0g609ag54vy5b"; depends=[mvtnorm]; }; freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; }; freqweights = derive2 { name="freqweights"; version="1.0.2"; sha256="183x94j727z6phayy0zy9q4x5fnww8h51ghpmc6jbwc5r40vp4px"; depends=[biglm data_table dplyr FactoMineR fastcluster plyr]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; - frmhet = derive2 { name="frmhet"; version="1.1.2"; sha256="1a6q5qz22b4sx5l1jz50x1q3bz8sj91dj2cahq28h6ss5b8vfn0y"; depends=[]; }; - frmpd = derive2 { name="frmpd"; version="1.0.1"; sha256="104frdraawj8g76589kz4csbgzkvs4rgdhgwmb77srhqp5nc8v96"; depends=[]; }; + frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; }; + frmpd = derive2 { name="frmpd"; version="1.1.0"; sha256="0irgqdr0vr8k408lsxcrjkjbjvqvmy5mnjw9c1ghs86isrp5mciz"; depends=[]; }; frmqa = derive2 { name="frmqa"; version="0.1-5"; sha256="0vd5jnjzhkc0vd4cqn4cs6a3limd4fxwyb5i7845rwmkzk1944aj"; depends=[partitions Rmpfr]; }; + fromo = derive2 { name="fromo"; version="0.1.3"; sha256="132i9z8zwjm8a7fw5mdqq0a3q8hd985mrifg67lddqkxwgc8lxcc"; depends=[Rcpp]; }; frontier = derive2 { name="frontier"; version="1.1-0"; sha256="0k2ap22qddzki63biikr1jzi5vmqz4j06d7qrf1y8axdq1q1cr44"; depends=[Formula lmtest micEcon miscTools moments]; }; frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; - fscaret = derive2 { name="fscaret"; version="0.9.4"; sha256="0cna1cixq021lka7c8jgfqr6h8vvyvylckkbfay10ng7cxpqa44c"; depends=[caret gsubfn hmeasure]; }; - fsia = derive2 { name="fsia"; version="1.0"; sha256="0qa4avd1xiwh1ih1cj067r7vipab2ngspq7hfd0xbapwx87fggrg"; depends=[]; }; - fslr = derive2 { name="fslr"; version="1.5.0"; sha256="0ks2g21f8zkf72y3rlhj7c54np9jadgf0nir2pyn2vcy6f0w85ai"; depends=[matrixStats oro_nifti R_utils scales stringr]; }; + fscaret = derive2 { name="fscaret"; version="0.9.4.1"; sha256="19g0vcgbq3l9b9x264jg5q17lrky7xrznc8wjxkvnjqdykjmzjhp"; depends=[caret gsubfn hmeasure]; }; + fsia = derive2 { name="fsia"; version="1.1"; sha256="18pblp22rfaklv283515qrx8liaqf84mm8gw9pj70qi068nw36x8"; depends=[]; }; + fslr = derive2 { name="fslr"; version="2.0"; sha256="010kd7h5dfqqq4vxhkyf11sg8aj5jhk92953y0jfln24z6qbkz5m"; depends=[matrixStats neurobase oro_nifti R_utils]; }; fso = derive2 { name="fso"; version="2.0-1"; sha256="02dr12bssiwn8s1aa1941hfpa4007gd65f3l4s74gs2vgjzdxf8s"; depends=[labdsv rgl]; }; + fst = derive2 { name="fst"; version="0.7.2"; sha256="1y2yzx8bwn747vibi0dds1m1rwyy588nppvbgp4bars1w3h4pps5"; depends=[data_table Rcpp]; }; ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; }; fts = derive2 { name="fts"; version="0.9.9"; sha256="1qgp8xdwr5pp2b7nd8r717a6p8b6izwqrindx2d1d0lhhnqlcwhv"; depends=[BH zoo]; }; + ftsa = derive2 { name="ftsa"; version="4.7"; sha256="0n31vd73r2zm7mzlkd4bjpz9p61qq35jld06bv9p9dg0y883xnig"; depends=[colorspace fda forecast MASS pcaPP rainbow sde]; }; ftsspec = derive2 { name="ftsspec"; version="1.0.0"; sha256="12f9yws1r26i240ijq0xqprl3pgbw50wv68jsm75ycplbs2jsyhs"; depends=[sna]; }; fueleconomy = derive2 { name="fueleconomy"; version="0.1"; sha256="1svy5naqfwdvmz98l80j38v06563vknajisnk596yq5rwapl71vj"; depends=[]; }; fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; }; - fullfact = derive2 { name="fullfact"; version="1.0"; sha256="1yda1fkpzzgzcm5m2iflvay9w3zbc31yx2sy30swjy92a2z4abm4"; depends=[afex lme4]; }; - fulltext = derive2 { name="fulltext"; version="0.1.6"; sha256="1k415wzcxbgbh3p38q61wymjy7a5dicy7k7q3d6syk3pc9nx1cmr"; depends=[aRxiv digest httr jsonlite magrittr R_cache rcrossref rentrez rplos rredis tm whisker xml2]; }; + fullfact = derive2 { name="fullfact"; version="1.1"; sha256="1pnz1gykmvxdwf1a3n1z4v9md6kjlai4fvzqjzcyshw5nq81dciw"; depends=[afex lme4]; }; + fulltext = derive2 { name="fulltext"; version="0.1.8"; sha256="14gvhjc9433hnb5dh88svxyahbcv968njxjfwgc5ii9lpcpw5935"; depends=[aRxiv digest httr jsonlite magrittr R_cache rcrossref rentrez rplos rredis tm whisker xml2]; }; fun = derive2 { name="fun"; version="0.1-0"; sha256="0z4nq2w1wz1clc7cf87pf870hayxq5mpzhllfgwj4mmh2xpphnrf"; depends=[]; }; + funData = derive2 { name="funData"; version="1.0"; sha256="13f6jlw3g7glz5anlwmj7g64kia18ldm3nfj55qybjfh4b6rh7v3"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; funHDDC = derive2 { name="funHDDC"; version="1.0"; sha256="038m64yv27wz7ki2gcn94q011p8mv0ggmli5n27y0f5bnkfh6d6w"; depends=[fda]; }; - funModeling = derive2 { name="funModeling"; version="1.1"; sha256="1zdc6x75ksdm030pw8ldb00x5prlci29d6p6dbxiavwh9z4081z3"; depends=[ggplot2 gridExtra Hmisc pander plyr reshape2 ROCR scales]; }; + funModeling = derive2 { name="funModeling"; version="1.6"; sha256="1h0qzdx6yk10snhx6apriz3al52wqrisffqvanhpznsvk8yg3wvd"; depends=[dplyr ggplot2 gridExtra Hmisc lazyeval pander reshape2 ROCR scales]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; - funcy = derive2 { name="funcy"; version="0.8.4"; sha256="1rgdldjjpy8zvll6lhx6al70iazg4vfd86jhyx1c50hpnnl0yajb"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; - fungible = derive2 { name="fungible"; version="1.3"; sha256="0rzvib56p7sbiqk0ac36fdfrsavivdw5123gkklw33qny3jzzvhp"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; }; - funr = derive2 { name="funr"; version="0.2.0"; sha256="0fmqrjvzpc7jbs85fznw723k9xmpxvbj65nkfc9qrvskgmja4mjn"; depends=[]; }; - funreg = derive2 { name="funreg"; version="1.1"; sha256="1sxr4mylcpbya197d55yi6d7g5pfspaf59xxbwjgmwgjw06rl76r"; depends=[MASS mgcv mvtnorm]; }; - funtimes = derive2 { name="funtimes"; version="2.1"; sha256="1h8d2x683a1s4inlbh5y4zijzyny1q902xa5any9hcb6svjfqr6z"; depends=[Jmisc]; }; + funcy = derive2 { name="funcy"; version="0.8.6"; sha256="0wlcwwmv92djj35i7nnfns5l79fca6hsfrjxgsqmwgjb28gy19bs"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; + fungible = derive2 { name="fungible"; version="1.5"; sha256="1f4q26rfl7d35ng5nx11mzzv9fhk4zg62j63c59i649wcx1xsan9"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; }; + funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; + funrar = derive2 { name="funrar"; version="1.0.2"; sha256="0qxhlqc1i0w91xmqawbsqk7gh8fdxq165qrjkbprsw548p5jbdbn"; depends=[cluster dplyr]; }; + funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; + funtimes = derive2 { name="funtimes"; version="3.0"; sha256="017qad38q5zpbzpsln0cns7y1wf5q5xm7kll4knqrfa6zwaijl92"; depends=[Jmisc]; }; + furniture = derive2 { name="furniture"; version="1.4.1"; sha256="1bziqav2y7h7fkv84ci3p483zbn2rw0wr0cz6jc5a9h8g1gz80cl"; depends=[knitr]; }; futile_any = derive2 { name="futile.any"; version="1.3.2"; sha256="09z12dlj7cnkfwnmgsjknsghirv1cry83w4a9k4d0w5a1jnlr5jg"; depends=[lambda_r]; }; - futile_logger = derive2 { name="futile.logger"; version="1.4.1"; sha256="1plld1icxrcay7llplbd4i8inpg97crpnczk58mbk26j8glqbr51"; depends=[futile_options lambda_r]; }; - futile_matrix = derive2 { name="futile.matrix"; version="1.2.2"; sha256="1cb975n93ck5fma0gvvbzainp7hv3nr8fc6b3qi8gnxy0d2i029m"; depends=[futile_logger lambda_r lambda_tools RMTstat]; }; + futile_logger = derive2 { name="futile.logger"; version="1.4.3"; sha256="1r3nayk0z9n1svbf8640vw90dal5q07nkn0gv4bnva3pbzb352sy"; depends=[futile_options lambda_r]; }; + futile_matrix = derive2 { name="futile.matrix"; version="1.2.6"; sha256="10v7ffjm8az75lb39526p3y8b1zhmmzx07pybiy20zydznhyvv2p"; depends=[futile_logger lambda_r lambda_tools RMTstat]; }; futile_options = derive2 { name="futile.options"; version="1.0.0"; sha256="1hp82h6xqq5cck67h7lpf22n3j7mg3v1mla5y5ivnzrrb7iyr17f"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; - future = derive2 { name="future"; version="0.12.0"; sha256="0cr8xddwkn9pwcrjvfd0z000sx233p3zafrp3b8waz6sh6zs1k7k"; depends=[digest globals listenv]; }; + future = derive2 { name="future"; version="1.3.0"; sha256="00ys5h583s9kr415l6mv79k2s63b13jk7kjrvfmzskzvxrgqizm4"; depends=[digest globals listenv]; }; + future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.13.1"; sha256="0w3mbrqxy7w7rl2blka81djmlgj6yffxssn56f0xfwfwhbhsn1pc"; depends=[BatchJobs future R_utils]; }; + futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; }; + fuzzr = derive2 { name="fuzzr"; version="0.2.0"; sha256="0m5x3khps7mk43xvk76jqylcxs9581y1ppr58bq68j4rqraq3r1s"; depends=[assertthat progress purrr]; }; fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-7"; sha256="0mhml0zzya58yn4wrafxk62agfrck6rryn5klprr416pj83pzcgk"; depends=[]; }; + fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.2"; sha256="11lgv9faq1avgvb58br2dbd46k7449v3y5cv0cjmlj63a6357lqw"; depends=[doParallel doRNG foreach ggplot2 randomForest]; }; + fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.2"; sha256="1anipzcr5j5vp9p8hy16vdc7rf8kd0nm5r72j9998npad7k5xj8d"; depends=[dplyr geosphere purrr stringdist stringr tidyr]; }; fwdmsa = derive2 { name="fwdmsa"; version="0.2"; sha256="0p0kh8am6gajfaixkvq61f12hfbm6chl9372yzn1yilhiyvqdxgp"; depends=[]; }; fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; }; fwsim = derive2 { name="fwsim"; version="0.3.3"; sha256="1ix4sl2krlr0b0wfgvy73qhpmkjymqcci3q3v60j20zapi55gxn2"; depends=[Rcpp]; }; fxregime = derive2 { name="fxregime"; version="1.0-3"; sha256="15fh8yhcba2gw2xfd0yiw5ssvbgb62l6vb28bxz71ckdyv9nsahk"; depends=[car sandwich strucchange zoo]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; + g2f = derive2 { name="g2f"; version="0.1"; sha256="1njx03hnfvzqyzhyjg5zwikv36xggss2vc82vpfybg6rqkx3rqbd"; depends=[KEGGREST minval sybil]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; gIPFrm = derive2 { name="gIPFrm"; version="2.0"; sha256="1syjsnna7b7y27yf7zsxjwq8z5f4wxf2hfadhgjaw898gvfcnrbc"; depends=[]; }; + gLRTH = derive2 { name="gLRTH"; version="0.1.0"; sha256="0a4vcfb54sqbk43gp397dwc02701wzsf4sxq2r121m2amad79nl5"; depends=[]; }; gMCP = derive2 { name="gMCP"; version="0.8-10"; sha256="1alfy91mk6zx0k49w5ksa77qg5iqbav20ydfl1w7bh8dzp4xxxqk"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; - gMWT = derive2 { name="gMWT"; version="1.0"; sha256="12ryjpq0k3brw4xy4f6j89zm94j6phbzn9ga0nr9bzfvslhqjhna"; depends=[clinfun Rcpp RcppArmadillo]; }; + gMOIP = derive2 { name="gMOIP"; version="1.1.0"; sha256="122yzwicsq7q98x5dxk1mmf148v2w64jz3pd3535himx85gy9zy3"; depends=[ggplot2 ggrepel]; }; + gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; - gProfileR = derive2 { name="gProfileR"; version="0.5.3"; sha256="0kv01b1ihwggzjd9plznz3il3b97pja11nqki3378zvpgfy5wzdn"; depends=[plyr RCurl]; }; - gRain = derive2 { name="gRain"; version="1.2-5"; sha256="1rzg8w36qhpar1kn1dvjw54j1i0anpqr9iv51i9gf4dm6s3afylq"; depends=[graph gRbase igraph Rcpp RcppArmadillo RcppEigen]; }; + gProfileR = derive2 { name="gProfileR"; version="0.6.1"; sha256="1qix15d0wa9nspdclcawml94mng4qmr2jciv7d24py315wfsvv8p"; depends=[plyr RCurl]; }; + gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; }; gRapHD = derive2 { name="gRapHD"; version="0.2.4"; sha256="0fxd04s6zh23chks4k6nwb5w408xjy89b44pa42kv6qnqj86ylvm"; depends=[graph]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; - gRbase = derive2 { name="gRbase"; version="1.7-5"; sha256="1bl53dgv4n1hfy1ckp5wn9k5xnd97pdy07q8grd84vpi2fbdc454"; depends=[graph igraph Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; - gRc = derive2 { name="gRc"; version="0.4-1"; sha256="1a6q24yj7js1sk0lfqbm7kdv605cby6i711w4dlygsxdvwxbrsdr"; depends=[graph gRbase Rgraphviz]; }; + gRbase = derive2 { name="gRbase"; version="1.8-1"; sha256="07b5vl55v04ycwwh92xp86c12kxvhrlbakjrlxrlq8i8drs3bpcj"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; + gRc = derive2 { name="gRc"; version="0.4-2"; sha256="0cqc3s7a1njxzmnx7yx1yjkrazbai3gpw2kc4l7g49ld4j40bsln"; depends=[gRbase MASS]; }; gRim = derive2 { name="gRim"; version="0.1-17"; sha256="0vn031r318kp78cx00n43fc42bv6sjyb8dm6q0l08s0g9n2w17dp"; depends=[gRain gRbase igraph Rcpp RcppArmadillo]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; gSeg = derive2 { name="gSeg"; version="0.3"; sha256="0dcvnxldvxmmzaz4cqpr40jpmny5l012m6j7xd5954bgfg06gs7w"; depends=[]; }; + gTests = derive2 { name="gTests"; version="0.1"; sha256="19037qn7q92dykry4wrnbdg7irkzk2vwz1j0kq2r836m03bs04nc"; depends=[]; }; + gWQS = derive2 { name="gWQS"; version="1.0.0"; sha256="0n0zwfqz5g4js5y3ss64dv5842jypr6sqacs32ax37immd34slhq"; depends=[ggplot2 Rsolnp tableHTML ztable]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54"; sha256="13lbbbnmkvb559klgsnz0q27qlyv102xakb6yccxsxjw249hm8c2"; depends=[]; }; - gWidgets2 = derive2 { name="gWidgets2"; version="1.0-6"; sha256="0xh1f9j1y3zifz8xrvyp41c8zdgqx8lx0cg1sdqhxv8j3mxibcsg"; depends=[digest]; }; - gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-4"; sha256="0vyms79ysmami1gfgjmvlqp62gbnxgwckdrbwhjkmlg9rdmbi9y7"; depends=[gWidgets2 memoise RGtk2]; }; - gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-4"; sha256="1c9vfnr6j4lvshvdzp88a45pjrdl0dfhr1rxlpz95d3cks9rfq1f"; depends=[digest gWidgets2 memoise]; }; + gWidgets2 = derive2 { name="gWidgets2"; version="1.0-7"; sha256="02jrv5x7s3jm2ajpdvgsp4zkn65gjy96rvgdxhf9smp1kb6llzg0"; depends=[digest]; }; + gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-5"; sha256="0x6b05gag705mhp30wspamjrcx588gblgy839nv2j2w3n9k4vz98"; depends=[gWidgets2 memoise RGtk2]; }; + gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-5"; sha256="1g0p7bl76rkkrixzw4b1s99gyvi8b5a4vbnsj2wmy7y9grbzndkm"; depends=[digest gWidgets2 memoise]; }; gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-83"; sha256="1kn2095jx1amyzbkvgf7m466zqfv548n232xc555bpsrw9ma5qhk"; depends=[cairoDevice gWidgets RGtk2]; }; gWidgetstcltk = derive2 { name="gWidgetstcltk"; version="0.0-55"; sha256="06991rqh4927bal7j718bn2ziy6rws8yq682lmp5vbqhdd36afv2"; depends=[digest gWidgets]; }; + gafit = derive2 { name="gafit"; version="0.5.1"; sha256="160z3cv22prf7118447dla9g1gimwkfad8zdil3fg8n4l22rk51a"; depends=[]; }; gains = derive2 { name="gains"; version="1.1"; sha256="1mn8db8yxgkf8z6nm6k76g5l3i3vnw750ksg3w9ysd2pcabb65g1"; depends=[]; }; galts = derive2 { name="galts"; version="1.3"; sha256="0b18hsdcsx43rn8l4x9nhy9hgggjr5b8kvjnbxrf6r23qsdk43mn"; depends=[DEoptim genalg]; }; - gam = derive2 { name="gam"; version="1.12"; sha256="00rx8y7pcxabwjvg0ch6c76xqs43drjg3ih3kflqxdcl2rmaapnd"; depends=[foreach]; }; - gamair = derive2 { name="gamair"; version="0.0-9"; sha256="014fkysiyd49q9j0rrqh6wlp4pqz1q8lqgrqjxbp59x2mfhgxhsg"; depends=[]; }; - gambin = derive2 { name="gambin"; version="1.3"; sha256="1gxlg7rngryxhixpvq6xswq7i5wm31ya6zllx5zdbh65b925hmxf"; depends=[]; }; - gamboostLSS = derive2 { name="gamboostLSS"; version="1.2-1"; sha256="0571wqxxpb1h0dd6fw6vz2f3n2id78k8zbc9zclzdhk5798y784c"; depends=[mboost]; }; + gam = derive2 { name="gam"; version="1.14"; sha256="1z31anm8c4aly7wd9j4zl34pfc0i8cr3p2yjhhf4x3850a1sjlv6"; depends=[foreach]; }; + gamCopula = derive2 { name="gamCopula"; version="0.0-2"; sha256="19sx0n9mavjwdzi5ii7n2mcrcrm1k1pbsdmvwnrsqvbvaz9r8vbg"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; + gamair = derive2 { name="gamair"; version="1.0-0"; sha256="13n2n4b7givzvia93awy7ym0gihl4lr08w3a6ny2pq0f3zbhzw97"; depends=[]; }; + gambin = derive2 { name="gambin"; version="1.4"; sha256="11k5y400d8ghaagvd1wrisjsid5zn4qgv07qf60a6f4ynsfbigca"; depends=[]; }; + gamboostLSS = derive2 { name="gamboostLSS"; version="1.2-2"; sha256="1np2pb47pv1jgg1gl9k728bfxaq10yghnmgx2ahi2a86b6pzff2s"; depends=[mboost]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; gamclass = derive2 { name="gamclass"; version="0.56"; sha256="13gy8ys69dkhm54x3vcpqblq4j2hkbsnaswzcq0v0saqd9b1shcs"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamlr = derive2 { name="gamlr"; version="1.13-3"; sha256="05hxmhmgs83q6d5jhq9y5b5llk1pi2jf61286pmnwbzmdwdhrbr2"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="4.3-8"; sha256="1vgw5j8vw731my76z8xdcb1clg4hsim4gfkzv38w49hw64vijhlr"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; - gamlss_add = derive2 { name="gamlss.add"; version="4.3-4"; sha256="1sbs6jc7ashmkv8qz953v8paq4783rzw3m82b8ils4qm53ni8m01"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; - gamlss_cens = derive2 { name="gamlss.cens"; version="4.3-2"; sha256="0kakgvlx7g8v6wdlnjyganmvpnv8zqr1ml6n2saz913ykn3mkc77"; depends=[gamlss gamlss_dist survival]; }; - gamlss_data = derive2 { name="gamlss.data"; version="4.3-2"; sha256="056s441i25gxg52669nqvjc2xryaw5izbh5f8lcjgkflynhb102z"; depends=[]; }; + gamlss = derive2 { name="gamlss"; version="5.0-1"; sha256="1ai7zgsbxx7hdz4qq87dwk94zwzvzpjkmvlzi4hwwjpk350xpwcj"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlss_add = derive2 { name="gamlss.add"; version="5.0-1"; sha256="1agk6pfm04hf9dp5r6dvxqkj1hykx23a16q7vch2sg752z0dadgk"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; + gamlss_cens = derive2 { name="gamlss.cens"; version="4.3-5"; sha256="06baf94kpprj03dggnyvvmi4nw3qa23cyy1crsa0zfnaqj915ypv"; depends=[gamlss gamlss_dist survival]; }; + gamlss_data = derive2 { name="gamlss.data"; version="5.0-0"; sha256="1mqz7m4iksmx939bz1lq05cxz3bfcksn2ggw3cv7b0k98cykgg1s"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="4.3-5"; sha256="0qq4nvcbh7s675bk3afv3wm0xdnzcbabdsbln8n16xgyvsiyr4pl"; depends=[MASS]; }; - gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-2"; sha256="1hq0nv4l8z1iwbldf9vhdsgr0sd6jans90dvjgdvf2z66bvmc9i0"; depends=[gamlss gamlss_dist nnet]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-0"; sha256="1k1bn7a3kiasab27p21bgwacrz5z7ha3prl8m2gfnqx1i3z2kmci"; depends=[MASS]; }; + gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; - gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3"; sha256="0mbvllgr5szrxwrr40jbn2c57hplkgpbnbr2v6pszjjygjcys6ga"; depends=[gamlss gamlss_dist mgcv spam]; }; - gamlss_tr = derive2 { name="gamlss.tr"; version="4.3-1"; sha256="1fdy61i2dmz2qafk92kl9acjbxx5gm8s9kkc8k9nnx6230qg8iq6"; depends=[gamlss gamlss_dist]; }; - gamlss_util = derive2 { name="gamlss.util"; version="4.3-2"; sha256="13facgyd14jl4j09d446jjzs91zwmv85g22gkyyi1hl4i5v5nfc4"; depends=[gamlss gamlss_dist zoo]; }; - gamm4 = derive2 { name="gamm4"; version="0.2-3"; sha256="19vy5wik9nh77cm25gp3j3j8w8vinwzx5pv90nzdzvx84yvvf0y3"; depends=[lme4 Matrix mgcv]; }; + gamlss_spatial = derive2 { name="gamlss.spatial"; version="1.3.1"; sha256="0gfayygwqiahmcpnwdpiaj8p323624cclcrpkip6gc08ddfbr377"; depends=[gamlss gamlss_dist mgcv spam]; }; + gamlss_tr = derive2 { name="gamlss.tr"; version="5.0-0"; sha256="02akydpvwl1qkhxpr72lv9qp4z2ra69abyq51b57rh4p60g78vhm"; depends=[gamlss gamlss_dist]; }; + gamlss_util = derive2 { name="gamlss.util"; version="4.3-4"; sha256="0p8lnwrn7cx97qnxls1x532f3ywszdyib2qiwx5qc7sam59h9c8j"; depends=[gamlss gamlss_dist zoo]; }; + gamm4 = derive2 { name="gamm4"; version="0.2-4"; sha256="0jssi97kmad1fmnjlymx6sjv1qcfyslhwfcx8bfzl8x15fqj1v9v"; depends=[lme4 Matrix mgcv]; }; gammSlice = derive2 { name="gammSlice"; version="1.3"; sha256="1vw8d0v0awyflh4gmbcf1g9nfx52cys8gpqvag5djri59p0y945a"; depends=[KernSmooth lattice mgcv]; }; + gamreg = derive2 { name="gamreg"; version="0.2"; sha256="0k6npl5m1i22lgdvfjnv00pxaxh7qfd6sddy6raf4j33i6hp6ff6"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; gamsel = derive2 { name="gamsel"; version="1.7-3"; sha256="02j94va7srdb2wzj4f1b63qx9mlck0harsq140ndjgf9d9c44h01"; depends=[foreach mda]; }; gaoptim = derive2 { name="gaoptim"; version="1.1"; sha256="04igpn73k6f6652y496igwypfxmz4igg4jgxx6swqyi37182rqhm"; depends=[]; }; gap = derive2 { name="gap"; version="1.1-16"; sha256="0xyln7ffapm31cvx4n86ncyg3cdz5d2149qb5h5xx3kf0a8r7gpz"; depends=[]; }; + gapfill = derive2 { name="gapfill"; version="0.9.5-2"; sha256="1qmkr0yvc9akjaj30lxq2b4xrkxvdlmbkpk5zy89xvj6qnpdpb47"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.2.0"; sha256="1fxjz8lr3bsj3vml4yvm8pm72wpmw7c97bgp7acjf0q7l9x0d4vq"; depends=[]; }; gaselect = derive2 { name="gaselect"; version="1.0.5"; sha256="0xzx00n46x6x7w1xbx8nvabkkrna45pv1i70787m8h05q1yrjjij"; depends=[Rcpp RcppArmadillo]; }; - gaston = derive2 { name="gaston"; version="1.4"; sha256="1bq2b8mdgs4a8mjs137i0rry82dqm4sdrydlhqs7f2maqb28j4zm"; depends=[LDheatmap Rcpp RcppEigen RcppParallel WhopGenome]; }; + gasfluxes = derive2 { name="gasfluxes"; version="0.2"; sha256="01mqqj49p8z1m580a9fjrifyd7q2nl2qh8p3bxi2qqw38jxaccql"; depends=[AICcmodavg data_table MASS sfsmisc]; }; + gaston = derive2 { name="gaston"; version="1.4.9"; sha256="13fb67lq30rv91q5ffwijm011dqflrvywlcd0s2caims6zsarbvz"; depends=[Rcpp RcppEigen RcppParallel WhopGenome]; }; + gatepoints = derive2 { name="gatepoints"; version="0.1.2"; sha256="03m84xixsardy4yjzf67qway07hwhjpzc92xgvg9kb7npiclq5bl"; depends=[]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; + gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; gaussquad = derive2 { name="gaussquad"; version="1.0-2"; sha256="0bcvkssmwwngcd4cnv924n9h3c8z1w3x9c9bkwn5jbz9zyv1lfms"; depends=[orthopolynom polynom]; }; - gazepath = derive2 { name="gazepath"; version="1.0"; sha256="00k6617wra9pcvyr94mr48c21l7z6grlpgf9g02lh23p6900fjxq"; depends=[]; }; + gazepath = derive2 { name="gazepath"; version="1.1"; sha256="0zq7bcld41737qk94gjbcphpirrnnf8k6z3f8l3jay2n47yn4gji"; depends=[jpeg scales SDMTools shiny zoo]; }; gb = derive2 { name="gb"; version="1.1.8-8"; sha256="18n9wqz82mjxjgzk8vc68kyz3b6lk21d2f16551d6fikjla03adf"; depends=[boot]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; gbm = derive2 { name="gbm"; version="2.1.1"; sha256="0jkjr09w9cgfb21aznvr9nivxjmj1zxfsl7gafy4mwh719jzygy0"; depends=[lattice survival]; }; gbm2sas = derive2 { name="gbm2sas"; version="2.1"; sha256="0ssjlv849vssmncn01ccpp2myqib5f3g88g0d4rqma2z0ivdpk23"; depends=[gbm]; }; + gbp = derive2 { name="gbp"; version="0.1.0.4"; sha256="0awg724gsfwlb0fjcvw0450qdsk4m8x8is16pj5c8fx6nc8rn8bv"; depends=[data_table magrittr Rcpp RcppArmadillo rgl]; }; + gbs2ploidy = derive2 { name="gbs2ploidy"; version="1.0"; sha256="0gdjfqs9ccyaw7vi22wbyc742n1badr5ypr08g6rvi8ka5lmx836"; depends=[MASS rjags]; }; + gbts = derive2 { name="gbts"; version="1.0.1"; sha256="1n6180sfr5m7vms8rk8pwsg7nxyw3pmq05bh72462ygyfykivifm"; depends=[doParallel doRNG earth foreach gbm xgboost]; }; gbutils = derive2 { name="gbutils"; version="0.2-0"; sha256="1hi2kq4m7lrhd9yikf4qb0xccr6v1pp7kmly5j68xd3m95fi86rc"; depends=[]; }; - gcbd = derive2 { name="gcbd"; version="0.2.5"; sha256="0fkg6vk0jkl6680n1hljyv783j4hd84mql0k4pfblvqafwv4nhm3"; depends=[lattice plyr reshape RSQLite]; }; + gcKrig = derive2 { name="gcKrig"; version="1.0.1"; sha256="1iqbhfw4ib3lgjbaspjdh2qxif1inwly9fi8hyf4x6a153f20502"; depends=[Rcpp RcppArmadillo]; }; + gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; }; gcdnet = derive2 { name="gcdnet"; version="1.0.4"; sha256="0fmy0li06rahch4ir0xa81yilvrd0zqyhmpl4hfxjahhl3npw370"; depends=[Matrix]; }; - gcerisk = derive2 { name="gcerisk"; version="16.1.2"; sha256="0i8h10yllxdl0az7byqisfx5x3s1nrp3xzp7myawmp4a0d11h1zc"; depends=[cmprsk ggplot2 survival]; }; + gcerisk = derive2 { name="gcerisk"; version="16.1.3"; sha256="0bjd3paxf1jrirv2grq20rk40l7izbw2y2dnj687hwcgah5021gv"; depends=[cmprsk ggplot2 survival]; }; gclus = derive2 { name="gclus"; version="1.3.1"; sha256="02ba6zj9bjwrzykamjp40ajynx9xjx9h2i85n0ym0r5lcki4x6fn"; depends=[cluster]; }; gcmr = derive2 { name="gcmr"; version="0.7.5"; sha256="1z1hdgdasmw3drld8nmkw6cc1xls1gaaym1mlr8lyida4gb3giv8"; depends=[betareg car Formula geoR lmtest nlme sandwich sp]; }; gconcord = derive2 { name="gconcord"; version="0.41"; sha256="1n3pfwk6vip19q1zhbz1n164f9vi7mig8pcd07c4wxnm5ir9dagy"; depends=[]; }; @@ -4384,138 +5460,184 @@ in with self; { gdata = derive2 { name="gdata"; version="2.17.0"; sha256="0kiy3jbcszlpmarg311spdsfi5pn89wgy742dxsbzxk8907fr5w0"; depends=[gtools]; }; gdimap = derive2 { name="gdimap"; version="0.1-9"; sha256="0ksbpcy739bvsiwis0pzd03zb4cvbd8d5wdf8whfn9k6mkj4x9rs"; depends=[abind colorspace geometry gridExtra gsl movMF oro_nifti rgl]; }; gdistance = derive2 { name="gdistance"; version="1.1-9"; sha256="174ngm0xg993gkmf70yaln98d2rpjvdx5ngf2aga1jzph6xxdj6d"; depends=[igraph Matrix raster sp]; }; - gdm = derive2 { name="gdm"; version="1.1.7"; sha256="1yqjg57ghrbn38i2llna1jppjfasrgxp696afzr9hgw1hlmyknsa"; depends=[plyr raster Rcpp reshape2 vegan]; }; - gdtools = derive2 { name="gdtools"; version="0.0.7"; sha256="1bmnf9d677f2jy8jnb9ymjz1qzm4yrd0qp6k5qrrly06jfffyx7g"; depends=[Rcpp]; }; + gdm = derive2 { name="gdm"; version="1.3.0"; sha256="185vsf8cvazk3865ds1vxwaaf3y8g7x52r5kp8rxkmnjavw6x24q"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; + gdmp = derive2 { name="gdmp"; version="0.1.0"; sha256="1dlzxf17ssm10pw14mk5lk0plgav2mj8xf39dacyg9hlrz9pjwki"; depends=[]; }; + gdns = derive2 { name="gdns"; version="0.2.0"; sha256="0cyyqmbdd520h8q6b9dficgh1vc8zf47bih72zdqbz2hrkjm4yc4"; depends=[httr jsonlite purrr stringi]; }; + gdpc = derive2 { name="gdpc"; version="1.0.2"; sha256="03gh69vb3zmsi7rlikl3a7vr7sar3x12d8lar2qa0nfksn0qa6dk"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; + gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; + gdtools = derive2 { name="gdtools"; version="0.1.3"; sha256="1prh814lw3qkgnf0760cvpic1k68jhlkpcxlksv8chjkvsrnnf09"; depends=[Rcpp withr]; }; gear = derive2 { name="gear"; version="0.1.1"; sha256="1sqj9pz15j1v6fm4q2dp0zhdmy9zmmhmgxjwria5ihrp3b5hvwry"; depends=[lattice optimx sp]; }; gee = derive2 { name="gee"; version="4.13-19"; sha256="14n2fa2jmibw5j8n4qgbl8xbxhapmx4z3zrmkbcci39k9dsyplzb"; depends=[]; }; - geeM = derive2 { name="geeM"; version="0.8.0"; sha256="1glnzv06wsrxb1rp4p38w1hmnk4jvd78wymvffhkklwsrmg8jgw5"; depends=[Matrix]; }; - geepack = derive2 { name="geepack"; version="1.2-0.1"; sha256="0jipq3ylkvpg2qnwmfxlra6ad8lpsm8hllvqaiiddbhppqn9pj92"; depends=[]; }; + geeM = derive2 { name="geeM"; version="0.10.0"; sha256="0bk99kwh6xapkaxc3yis5x3d49j7pb45hq4ksbmkhz6ba21c4sn5"; depends=[Matrix]; }; + geepack = derive2 { name="geepack"; version="1.2-1"; sha256="13fkz38rsdk1byv6rdpdmphz5dd31r4h8ms49hali6hjh5rydzvy"; depends=[]; }; geesmv = derive2 { name="geesmv"; version="1.3"; sha256="0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w"; depends=[gee MASS matrixcalc nlme]; }; - geigen = derive2 { name="geigen"; version="1.9"; sha256="1klglmhfrfys7kn89wjkg7gk4sjsz538xkw5k8sk039wr0qxk8yj"; depends=[]; }; + geigen = derive2 { name="geigen"; version="2.0"; sha256="00l4d512w2r2yc1naqfapfxv1l4v6ccww6hqzchf4zhkqmfr3mgd"; depends=[]; }; geiger = derive2 { name="geiger"; version="2.0.6"; sha256="1zry3iclj7yciiiysbq6z0kn759c7hdy5fq0dcszkskqcd92qfz1"; depends=[ape coda colorspace deSolve digest MASS mvtnorm ncbit Rcpp subplex]; }; - gelnet = derive2 { name="gelnet"; version="1.2"; sha256="1npzgbwpsbd0rpyp46njyhwhas0k28nj8b5rz1jmhgn4xf156wkn"; depends=[]; }; - gems = derive2 { name="gems"; version="1.0.0"; sha256="0h8z3ih24hxdv8bah4xf8f797pnwihby8hj93z6zw5sq9dyszxwa"; depends=[data_table MASS msm plyr]; }; - gemtc = derive2 { name="gemtc"; version="0.8"; sha256="00pjr9pcjvmlfbmssqwq2qh6cffgg7ach9nikjd5w086z0qnngis"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; + gelnet = derive2 { name="gelnet"; version="1.2.1"; sha256="10ygdfz9f5xhahlqb2divwvaljhiz8jhsd12wvq0qalx0v1h5j0p"; depends=[]; }; + gem = derive2 { name="gem"; version="0.19"; sha256="11gzqpc9s1bkx1w6ncjylmfqqf3wj5hgca4lzygvlni9xz7pk517"; depends=[signal]; }; + gemlog = derive2 { name="gemlog"; version="0.20"; sha256="1f36p2ggba2rkkp7i6y9sgwjg2ygjhb01ww8adfivksgj103ww8v"; depends=[signal]; }; + gems = derive2 { name="gems"; version="1.1.0"; sha256="1ydc0qj9xhhshgpyd4f8l7ljk6mszn2n1sg9s5l4c4y87br2rfyn"; depends=[data_table MASS msm plyr]; }; + gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; gemtc_jar = derive2 { name="gemtc.jar"; version="0.14.3"; sha256="18hbiygpsv67flc4v6z6mir0rfq41v1vsh11dg9phmdr8bx4kcl1"; depends=[rJava]; }; genMOSS = derive2 { name="genMOSS"; version="1.2"; sha256="18qinckzz7wsw222skrq30izbj6s85i8hq6iicj9nng8gh6jydr8"; depends=[ROCR]; }; genMOSSplus = derive2 { name="genMOSSplus"; version="1.0"; sha256="1n3ngx1piy3l14k5k95wrgvrjw9238jkygfqanl3xg2na2mmkr26"; depends=[]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; genalg = derive2 { name="genalg"; version="0.2.0"; sha256="1wzfamq8k5yhwbdx0wy1w5bks93brj0p890xxc4yqrja4w38ja3s"; depends=[]; }; genasis = derive2 { name="genasis"; version="1.0"; sha256="1r0733cc2hss3f8dp19s1ji55yp72mds7p3x1zvvpiks2r7w712p"; depends=[fitdistrplus Kendall]; }; + gencve = derive2 { name="gencve"; version="0.3"; sha256="00wbmaffm7mbfv3zl6mb24w1df1a8p24girwdh3a522lw3045iwf"; depends=[C50 class e1071 glmnet lars MASS nnet plus randomForest rpart]; }; gendata = derive2 { name="gendata"; version="1.1"; sha256="1r5bhmfblhk6d31v0byhp4a0pmpri6vk697zmmx9b0hvhda7mllf"; depends=[]; }; gender = derive2 { name="gender"; version="0.5.1"; sha256="0qiwqnpk2pzwvvvnnny0wmmrix1aq3kwnk6n9jyvqzh0v9bzd65g"; depends=[dplyr httr jsonlite]; }; - genderizeR = derive2 { name="genderizeR"; version="1.2.0"; sha256="1a7vafspdd64wr47k1z391ff1ri5f8bynlgn876khcxzhm2vwdva"; depends=[data_table httr magrittr stringr tm]; }; + genderizeR = derive2 { name="genderizeR"; version="2.0.0"; sha256="0r9r5x93zr58sfrww3l2vyvjyj8lir2yds08y6dzf88rs9v15w3c"; depends=[data_table httr magrittr stringr tm]; }; gendist = derive2 { name="gendist"; version="1.0"; sha256="0n3ax7iy40ymrxhmb88w31a4aacaps9f1iild42afin7i7vy4dq9"; depends=[]; }; geneListPie = derive2 { name="geneListPie"; version="1.0"; sha256="0z2gawfzhm05dafj4zlj6ifmf0dy7p1hrpa59lzxrnrc0wr6laji"; depends=[]; }; - geneNetBP = derive2 { name="geneNetBP"; version="1.0.0"; sha256="0xvri7h4ka3rf5cghwpz7ci7hdqrwrqfnxvwb7jkba73y3rmpri9"; depends=[graph Rgraphviz scales]; }; - geneSLOPE = derive2 { name="geneSLOPE"; version="0.36.6"; sha256="0c2b42j39yz85rffh0a9iqvb5fk5my7a6354dcxjz9fwh0irfdxf"; depends=[bigmemory ggplot2 SLOPE]; }; + geneNetBP = derive2 { name="geneNetBP"; version="2.0.1"; sha256="0sp1chyln5k2zsq7cdhvrqxwr2nhrll1pdl1l5g6fd4gjl2m1nwk"; depends=[bnlearn ggm gRain graph igraph Rgraphviz scales]; }; + geneSLOPE = derive2 { name="geneSLOPE"; version="0.37.0"; sha256="1pw6y0n1xnprz2d4hyhlp1m9grki7s9hi2f4nqxa34wynqkp4bx8"; depends=[bigmemory ggplot2 SLOPE]; }; geneSignatureFinder = derive2 { name="geneSignatureFinder"; version="2014.02.17"; sha256="1s9jj87wnzzgm9hnws09yhrxdlb6jw56i3ddwznvmh8vpzrspv4h"; depends=[class cluster survival]; }; + genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; + generalCorr = derive2 { name="generalCorr"; version="1.0.3"; sha256="10gg89b423dncmcvk6ysifb26m99ywsbwb6x8injghgnjjibjq1k"; depends=[meboot np psych xtable]; }; + generalhoslem = derive2 { name="generalhoslem"; version="1.2.4"; sha256="043p40kldfs1r4p140cq7pzshv6y6adipfsfg8vyr1s2bd16ffvs"; depends=[epiR MASS reshape]; }; generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; }; genetics = derive2 { name="genetics"; version="1.3.8.1"; sha256="0gfbrpz0zp5bgw3s21wrhjfy70laif47wcrjrm6mjgs6xapiw790"; depends=[combinat gdata gtools MASS mvtnorm]; }; - genie = derive2 { name="genie"; version="1.0.0"; sha256="1g8iyls6fm6a7b08j1wc7qa5aksnfnarricwpl3csp9x8k5qifap"; depends=[Rcpp]; }; + genie = derive2 { name="genie"; version="1.0.2"; sha256="1sh6xlj347fqrgsxn5xgn4h8wfr58xd20idsfzhlywabkhkfbf6i"; depends=[Rcpp]; }; genlasso = derive2 { name="genlasso"; version="1.3"; sha256="1q4ybg8xzphnqwywwdb7i2q94dlxwpggvisjqqdj39jh2cabda57"; depends=[igraph MASS Matrix]; }; genoPlotR = derive2 { name="genoPlotR"; version="0.8.4"; sha256="06c4flddv83nwjagnszl0sv92mbxf91qml8awhhxnrs1bna04f1p"; depends=[ade4]; }; + genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; }; + genomicper = derive2 { name="genomicper"; version="1.6"; sha256="12msl6syw5a3dvxg9fr1yprcpb9qwn8v2dvkpxgagal11p9q1kx7"; depends=[DBI]; }; genpathmox = derive2 { name="genpathmox"; version="0.2"; sha256="1m08j10mrvkrnlgxbhjn3qmjz29p121fc4haww5qrici06nipfdm"; depends=[diagram mice plspm quantreg]; }; genridge = derive2 { name="genridge"; version="0.6-5"; sha256="0ms8n1yrga5qqg9ni41ifyw6320aajyrwvjh6d27q1k96j2dicp4"; depends=[car]; }; gensemble = derive2 { name="gensemble"; version="1.0"; sha256="0yyi7djzqx4yhxp6yy1rjgvzidjlna79ds89bgj6m6zj3aav6yw2"; depends=[]; }; + gensphere = derive2 { name="gensphere"; version="1.0"; sha256="184ky31l42k6x2di21hr2x1l35ksvr5yq8sr35mn642zckxx2y6g"; depends=[geometry mvmesh rgl SphericalCubature]; }; geo = derive2 { name="geo"; version="1.4-3"; sha256="0yxlafm99ypwf1700nh3hnnpndb6ghwwbi5sp6715zjbkkx94482"; depends=[mapdata maps]; }; geoBayes = derive2 { name="geoBayes"; version="0.3.3"; sha256="1jw0fj39gzf4cislc889ndgj34svcdxk0jz85ssk936g9gp0mm0c"; depends=[coda sp]; }; geoCount = derive2 { name="geoCount"; version="1.150120"; sha256="1kcjqls91r6p8ykn901c5p3v2lzbyainahhjpnr5c3a57v8s73ms"; depends=[Rcpp RcppArmadillo]; }; - geoR = derive2 { name="geoR"; version="1.7-5.1"; sha256="10rxlvlsg2avrf63p03a22lnq4ysyc4zq06mxidkjpviwk1kvzqy"; depends=[MASS RandomFields sp splancs]; }; + geoGAM = derive2 { name="geoGAM"; version="0.1-1"; sha256="04qgkbqjzvm9pxazj96716hf5cviy08a12r782id77l61dd9ya3s"; depends=[grpreg MASS mboost mgcv]; }; + geoR = derive2 { name="geoR"; version="1.7-5.2"; sha256="1sy968x154bsc3i3a6mxcwnyixcnmab5bc07dgibi9vzn0nkbbpb"; depends=[MASS RandomFields sp splancs]; }; geoRglm = derive2 { name="geoRglm"; version="0.9-8"; sha256="1zncqsw62m0p4a1wchhb8xsf0152z2xxk3c4xqdr5wbzxf32jhvh"; depends=[geoR sp]; }; geoaxe = derive2 { name="geoaxe"; version="0.1.0"; sha256="043y7kb24hp66j7pnpqsdixvdmppwp72y8i4f8q7xrkhaqlfb93v"; depends=[jsonlite rgeos sp]; }; - geocodeHERE = derive2 { name="geocodeHERE"; version="0.1.3"; sha256="10b1fgclv3199cglnip5xy0kgi3gi41q9npv7w3kajkrdknnxms4"; depends=[httr]; }; geoelectrics = derive2 { name="geoelectrics"; version="0.1.5"; sha256="0zy9m5k4b359mn29cd62cnwjm4fc19hy3l8p587yrrhsi20nbyna"; depends=[fields lattice rgl]; }; geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; }; - geojsonio = derive2 { name="geojsonio"; version="0.1.6"; sha256="1wksx97djj6s9fh580j414icn9ava58gix3bnikm94m9bv7yj32f"; depends=[httr jsonlite magrittr maptools rgdal rgeos sp V8]; }; - geoknife = derive2 { name="geoknife"; version="1.2.1"; sha256="1azrprrcah2szc0nk0a3dsh87qlm9jbhm9lc8qbrjp5wary0bkdc"; depends=[curl httr sp XML]; }; + geohash = derive2 { name="geohash"; version="0.1.2"; sha256="1vwalnf5cbpbq5b68zc6qa8mm84v5zlb8s2pwg7j2f7s43y0mgwz"; depends=[Rcpp]; }; + geojson = derive2 { name="geojson"; version="0.1.0"; sha256="0br2vp9lzqmz84scscclcd3d7ysvrdk68fxbc05ywnlsimdp5fxd"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; + geojsonio = derive2 { name="geojsonio"; version="0.3.2"; sha256="10rnp4ws3465p8jv6b15zbl662swd373nmlbxxk3n8dy7049qwpj"; depends=[httr jsonlite magrittr maptools readr rgdal rgeos sp V8]; }; + geojsonlint = derive2 { name="geojsonlint"; version="0.2.0"; sha256="05j7059s1hs8i2fkmkv0mqmda3bgk5zbyi865ab0vl361wiwmdya"; depends=[httr jsonlite jsonvalidate V8]; }; + geoknife = derive2 { name="geoknife"; version="1.5.2"; sha256="19adj5v14cxi32iadi4xlbg8f94vx4ail7454i4jj61i9a426ag1"; depends=[curl httr sp XML]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geometry = derive2 { name="geometry"; version="0.3-6"; sha256="0s09vi0rr0smys3an83mz6fk41bplxyz4myrbiinf4qpk6n33qib"; depends=[magic]; }; - geomnet = derive2 { name="geomnet"; version="0.0.1"; sha256="0yrlyhvqaab7y9ifrwmg93vq4fxp1lc87xxqhnkhp7qj9mhrpr7p"; depends=[ggplot2 network sna]; }; - geomorph = derive2 { name="geomorph"; version="3.0.0"; sha256="0yy4ln0g7wirbjzzh8c0cpnl6wsb0c0q82ic7kwjj0i213jxp2xd"; depends=[ape geiger jpeg Matrix phytools rgl]; }; + geomnet = derive2 { name="geomnet"; version="0.2.0"; sha256="0xanzx8p34bac4zcf9j69nivwhllvsrw7x70mzgl95jhg3gvv96a"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; + geomorph = derive2 { name="geomorph"; version="3.0.3"; sha256="0nxbd2gsi9nd61blslq9jdg1y7n14yhdgkrnjg9cxqsmjg9d9gf4"; depends=[ape geiger jpeg Matrix rgl]; }; geonames = derive2 { name="geonames"; version="0.998"; sha256="1p0x260i383ddr2fwv54pxpqz9vy6vdr0lrn1xj7178vxic1dwyy"; depends=[rjson]; }; + geoparser = derive2 { name="geoparser"; version="0.1.0"; sha256="0gz808bab1axncccigs0ahvk3h2d3b77dwfhw2631fp6l706r839"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; geophys = derive2 { name="geophys"; version="1.3-8"; sha256="0nw4m30r46892cf1n575jkfjgdjc14wic9xzmzcnskbk8cd50hp2"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; - georob = derive2 { name="georob"; version="0.2-3"; sha256="1amasfxjv3gd7199i3smk8dhgadw730l8cbj2pdpfwxwvwf2jlav"; depends=[constrainedKriging lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + georob = derive2 { name="georob"; version="0.3-3"; sha256="0a4v0ik05bxzg9rxzwa1s2adm9ja9mzxh897kjxdk5qv9y5pgrkm"; depends=[constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + geosapi = derive2 { name="geosapi"; version="0.1-0"; sha256="04qab7qs22f1havziv5ynmrmdvi8539gjyfl83x5w5l44rjrx7lb"; depends=[httr openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; }; - geosphere = derive2 { name="geosphere"; version="1.5-1"; sha256="06qwpaahpj2czs7rwv0rwnwlqjb4xanxyi00ci13b4imwb3w51q8"; depends=[sp]; }; + geosphere = derive2 { name="geosphere"; version="1.5-5"; sha256="0vffppnyxp7ryg7rvsb1ww9z0ghh1vk20vzgw245pi2gfh9f0vwb"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.4.0"; sha256="0anwqdwpsnivk421gaq4hpkx8m47m7jwll7qr7lnnssyljld7djc"; depends=[abind Matrix numDeriv raster sp]; }; + geostatsp = derive2 { name="geostatsp"; version="1.4.4"; sha256="0gvxbrr52v8g0a2mbzc8754z5ycpgz7hjfgi7xirn10iv99kwgjz"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; - geotopbricks = derive2 { name="geotopbricks"; version="1.3.7.2"; sha256="15z4969vgh0jwksqrjsd5m598xbz2ppf1ymvf80id4h0grzh08l5"; depends=[raster rgdal stringr zoo]; }; - geozoo = derive2 { name="geozoo"; version="0.5.0"; sha256="1a91x4mdmha40xs2pgwbycni10yhavwmb2mwm0pjj1gg5j2d82ri"; depends=[bitops]; }; - gesca = derive2 { name="gesca"; version="1.0.1"; sha256="08yprp486gw6vgh5rc7nl1myx57fs1y7a36g01i7vd0g1ikcpqwj"; depends=[]; }; - gesis = derive2 { name="gesis"; version="0.1"; sha256="0kvmlkq2cgxrjdq2dyjqs1pv875hdbapsygxrp0i8ab0fqirbrip"; depends=[RSelenium]; }; + geotopbricks = derive2 { name="geotopbricks"; version="1.4"; sha256="1jqkdhljf0syfvkcy7wgaccrhp3hfx0kymw3vyckhmf1dkwbjvyj"; depends=[raster rgdal stringr zoo]; }; + geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; + gepaf = derive2 { name="gepaf"; version="0.1.0"; sha256="0ld7r0dkap7bpmb2fc8x0pzffvnlzp2q1bndx4l2ffiyygsq6f72"; depends=[bitops]; }; + gesca = derive2 { name="gesca"; version="1.0.3"; sha256="1xr9kls6wdd1lnk4nrwix5p0dl93rl1zd3x88c0qyxzp11m2pcsf"; depends=[]; }; + gesis = derive2 { name="gesis"; version="0.2.1"; sha256="1cdmhfdjiwsp48a7b0r1mnagnymz606mkzpam9fsvfl72vzji2w7"; depends=[httr rvest xml2]; }; + getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.1.4"; sha256="1j5l4ig1cwxbl2si0kq4b7jv5r9ma4df2zbsw81z9lnkykc638g5"; depends=[curl dplyr plyr purrr raster tidyr]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; - getPass = derive2 { name="getPass"; version="0.1-0"; sha256="0jqlf4hl7g7jrwjm2y0syxm0csya2q3g2jlgsq9xfnyg56wa86qw"; depends=[rstudioapi]; }; + getPass = derive2 { name="getPass"; version="0.1-1"; sha256="14s8s3zrl5iwr7pw000b8mwxy17caf42yl0lf56b3qa71ifzxbnc"; depends=[rstudioapi]; }; + getlandsat = derive2 { name="getlandsat"; version="0.1.0"; sha256="0h2520r5sqyzsajqw2i86byw9zm5za27mhjkrzzw5vr5sh1vdiwb"; depends=[data_table httr rappdirs readr tibble xml2]; }; getopt = derive2 { name="getopt"; version="1.20.0"; sha256="00f57vgnzmg7cz80rjmjz1556xqcmx8nhrlbbhaq4w7gl2ibl87r"; depends=[]; }; - gets = derive2 { name="gets"; version="0.6"; sha256="0x6f7nh4a5yzdwh9pfpx2gzqng1lpappa2m0729419v11rzwmrp8"; depends=[zoo]; }; + gets = derive2 { name="gets"; version="0.12"; sha256="0prq1w5z2cfkg0k8hj2i660yrky8l74rrf7bcjpivc5ml2ssh9z7"; depends=[zoo]; }; gettingtothebottom = derive2 { name="gettingtothebottom"; version="3.2"; sha256="1cz2vidh7k346qc38wszs2dg6lvya249hvcsn6zdpbx0c0qs3y72"; depends=[ggplot2 Matrix]; }; + gettz = derive2 { name="gettz"; version="0.0.3"; sha256="1i06nfm824131q8lwwhrbzg2g9lbnmyp8k57w2vag7v8jj5rdrda"; depends=[]; }; gfcanalysis = derive2 { name="gfcanalysis"; version="1.4"; sha256="1hjgbiakf01mmaa2jhlnymcsjsj1zssay44p4sdxxxzpx4szs3vv"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; - ggExtra = derive2 { name="ggExtra"; version="0.3.4"; sha256="1lbwxmvxhfybywpzyh9h4qg962xckckfplv37w587fxa66kvs5xb"; depends=[ggplot2 gridExtra]; }; + gfer = derive2 { name="gfer"; version="0.1.3"; sha256="1s6s0ng940spj1056z8jd0p3i34kzr1skzjr8w64x20kps1rvl9l"; depends=[httr jsonlite rvest stringi V8 xml2]; }; + ggCompNet = derive2 { name="ggCompNet"; version="0.1.0"; sha256="1199n4s2rh5zg001l3j8wmc6fxkbkk5vzp4q5kg661k3khgx0hd5"; depends=[dplyr geomnet GGally ggmap ggnetwork ggplot2 gridExtra igraph network progress readr scales sna tidyr tnet]; }; + ggExtra = derive2 { name="ggExtra"; version="0.6"; sha256="1f91hvay4r0ikn87n6grxl0s7c542rxg2h61s3k8qzrzshy1wnkj"; depends=[colourpicker ggplot2 gtable miniUI shiny shinyjs]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; - ggRandomForests = derive2 { name="ggRandomForests"; version="1.2.1"; sha256="023badp3frvdmdq5acny4k6vq5xl78hsvr429060g9a8alrz51qy"; depends=[ggplot2 randomForestSRC survival tidyr]; }; - ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.0"; sha256="18pmqwyk8sbbj1j55ixfda4hfss83lcvcgz2nkppjdvaifad2lyh"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; - ggalt = derive2 { name="ggalt"; version="0.1.1"; sha256="05jpvyl19ppyzprzprsp66aardn90fyw7q837vb56s49ivim7sk1"; depends=[ash dplyr ggplot2 gtable KernSmooth maps MASS proj4 RColorBrewer scales]; }; - ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.5.0"; sha256="0h8nl56pld7rlhw381pzngx8mznxr9d5vs0lwcz2j6sy9db2y53i"; depends=[beeswarm ggplot2 vipor]; }; + ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; + ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; + ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; + ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.5.3"; sha256="1jgp55rvmzc4agcrlsjn8m5lk85di9c4wj94xzikqkql4lvq3qpd"; depends=[beeswarm ggplot2 vipor]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.1"; sha256="04jq1qpsgy8bgpilp1a02va4vz0adkjwrz9znmhv54q81qiv7h51"; depends=[ggplot2 reshape2]; }; - ggdendro = derive2 { name="ggdendro"; version="0.1-18"; sha256="13a807zgjjr4808h5bk2wkwmvx9v8nzl3zibd19gd5ah4mhmfx2z"; depends=[ggplot2 MASS]; }; - gge = derive2 { name="gge"; version="1.0"; sha256="06a9czn3r76rg85z84177j3pd4mhsrskim1bxj3phc866chwj1wb"; depends=[reshape2]; }; - ggenealogy = derive2 { name="ggenealogy"; version="0.1.0"; sha256="0shy6ylrx49yccyydhahqk1nnljqgf1cm11fl4cmb44la5zd3wjn"; depends=[ggplot2 igraph plyr reshape2]; }; - ggfortify = derive2 { name="ggfortify"; version="0.1.0"; sha256="0q4crp4syk2b48m2q38pc852y2bdy97spqrcjnl2q7yb3il1r90z"; depends=[dplyr ggplot2 gridExtra proto scales tidyr]; }; - ggiraph = derive2 { name="ggiraph"; version="0.2.0"; sha256="0z8gvqphww24w70hkvqvjh4afn5nk6blmvsvhghjhzgqgdwk1yyx"; depends=[ggplot2 htmltools htmlwidgets plyr rvg xml2]; }; + ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; }; + ggdmc = derive2 { name="ggdmc"; version="0.1.3.5"; sha256="0idsmviv1znkgi5yzwbj7wnn7hy9jk83jwjzsh7h205gbkzqjn90"; depends=[coda ggmcmc ggplot2 ggthemes gridExtra loo Rcpp RcppArmadillo rtdists]; }; + gge = derive2 { name="gge"; version="1.1"; sha256="04212spczyr2vqxki0n82ml26mgiq29i6mxyh06v42lqpg39sx19"; depends=[reshape2]; }; + ggenealogy = derive2 { name="ggenealogy"; version="0.3.0"; sha256="169zkcp13g0ll9941a7hh31fll0mavnkb6fd3kvkibdjm621ymyh"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; + ggforce = derive2 { name="ggforce"; version="0.1.1"; sha256="0y49anv5sj1qn1ifcxg1krkkv4z3dlan5lya36vfmzzdamfgq5p6"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.1"; sha256="19jwcz1z6g7l65l6cj8zspypfb86pn3x18vzdcgf932n14g646d2"; depends=[dplyr ggplot2 gridExtra scales tibble tidyr]; }; + ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; + ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; + gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.1"; sha256="1h8qkagsfhk5gba7jgzwrvc6hrc492pp34kmzgr3n8d8bjzj45a3"; depends=[ggplot2 ggrepel]; }; + ggimage = derive2 { name="ggimage"; version="0.0.1"; sha256="1jy4zg3ipbqsj6kj87crkb26wjlwcbipkh3yjhp8fsx4cqdcdrz7"; depends=[EBImage ggplot2]; }; + ggiraph = derive2 { name="ggiraph"; version="0.3.2"; sha256="07r5kf2ky6b09hvd3zdahl9b9v2509k4yxf10mw6hag2bb4lmgcz"; depends=[ggplot2 htmltools htmlwidgets plyr rvg xml2]; }; + ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.1.0"; sha256="09fiwkaai4sy5kxy4p0c4ldb8ya63czff53hbm6d8fm858fw2byw"; depends=[ggiraph ggplot2 mapproj mgcv moonBook mycor plyr reshape2 scales XML]; }; gglasso = derive2 { name="gglasso"; version="1.3"; sha256="0qqp5zak4xsakhydn9cfhpb19n6yidgqj183il1v7yi90qjfyn66"; depends=[]; }; + gglogo = derive2 { name="gglogo"; version="0.1.3"; sha256="1dq0bixz44p32kpma5wrqjqklal2ipjmqdwqap0xch542drlpqbn"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2]; }; + ggloop = derive2 { name="ggloop"; version="0.1.0"; sha256="0jpbgb16jfsv557zvishln98y7nd6p1ryp6hxkrkmhp9p35vzvc0"; depends=[assertthat ggplot2 lazyeval magrittr plyr]; }; ggm = derive2 { name="ggm"; version="2.3"; sha256="1n4y459x2i0jil8chjjqqjs28a8pzfxrws2fcjkg3il7zy0zwbw3"; depends=[igraph]; }; ggmap = derive2 { name="ggmap"; version="2.6.1"; sha256="0mssb09w818jv58h7mly9y181pzv22sgcd4a079cfpq04bs0wigw"; depends=[digest geosphere ggplot2 jpeg mapproj plyr png proto reshape2 RgoogleMaps rjson scales]; }; - ggmcmc = derive2 { name="ggmcmc"; version="0.8"; sha256="12dhhvqbmj20fk3c7h7qdvgc2hn83kb4gqwflsvgs7s8dmcdgy4i"; depends=[dplyr GGally ggplot2 tidyr]; }; - ggparallel = derive2 { name="ggparallel"; version="0.1.2"; sha256="05l58qr5mxkkmwl444n0v27r527z64hxkh106am3aj7ml916z0qc"; depends=[ggplot2 plyr reshape2]; }; - ggplot2 = derive2 { name="ggplot2"; version="2.1.0"; sha256="0s9rvp0f736ji6p9xpxq54agxf95pjkql4sj7ag0hv2xhnp27hzj"; depends=[digest gtable MASS plyr reshape2 scales]; }; + ggmcmc = derive2 { name="ggmcmc"; version="1.1"; sha256="09b89cnmdmiwy18igzxjiq60l1xqjh022fw3rhd5kx7lnh02yza3"; depends=[dplyr GGally ggplot2 tidyr]; }; + ggmosaic = derive2 { name="ggmosaic"; version="0.1.2"; sha256="1mxa09914j9i8b14brl70a7j7ngycj8wkil3sqkd4jwplaszvhsn"; depends=[dplyr ggplot2 gridExtra NHANES plotly productplots purrr tidyr]; }; + ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; }; + ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; }; + ggplot2 = derive2 { name="ggplot2"; version="2.2.1"; sha256="0543782ddv2hp6s0l702mnxfg8n7a6qlbm8bm55x22hnqgz8kg2z"; depends=[digest gtable lazyeval MASS plyr reshape2 scales tibble]; }; ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; - ggpmisc = derive2 { name="ggpmisc"; version="0.2.7"; sha256="0m1fbxcizmnp0mild77ldfycz9yiq9d5zvyk1vvpx5ng79lf6lz9"; depends=[dplyr ggplot2 lubridate polynom splus2R xts zoo]; }; + ggpmisc = derive2 { name="ggpmisc"; version="0.2.14"; sha256="0747jmf8zvqc6zzglbpr2vizcy905zgc9hgdabgdkg4zhhmlcqys"; depends=[broom dplyr ggplot2 lubridate MASS plyr polynom splus2R tibble xts zoo]; }; + ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; + ggpubr = derive2 { name="ggpubr"; version="0.1.1"; sha256="1r1hhlw2zz1n1grwddd45sssdgrv43wf4dj9vjdryssz44rvxs85"; depends=[ggplot2 ggrepel ggsci plyr]; }; ggraptR = derive2 { name="ggraptR"; version="0.1"; sha256="060ksjq790rvv9kyyf6v6z0irawlw3hxaq8n0dvzmfkw58pk5fpd"; depends=[dplyr DT futile_logger ggplot2 ggthemes shiny shinyBS shinyjs]; }; - ggrepel = derive2 { name="ggrepel"; version="0.5"; sha256="04kqmvr122lhb79y2wnwfx249sh8hkfd0p4gx13mb52qgzzd1f4r"; depends=[ggplot2 Rcpp]; }; - ggseas = derive2 { name="ggseas"; version="0.3.0"; sha256="08536kp45alhdm6r3vl7zc62by2q0rfmr67av9f664x6fx4q8xdi"; depends=[ggplot2 seasonal zoo]; }; - ggsn = derive2 { name="ggsn"; version="0.3.0"; sha256="02a4p15mqvfjxicwimp00nmd4bm7ydqxppxkxr11n2aqng9fjyrn"; depends=[ggplot2 maptools png]; }; - ggspectra = derive2 { name="ggspectra"; version="0.1.6"; sha256="1wvw9yjdb3jysg0nc6nfvhdbfzqh9i88rzin0bdw93gfq6fv969j"; depends=[dplyr ggplot2 lubridate photobiology photobiologyWavebands scales tidyr]; }; - ggswissmaps = derive2 { name="ggswissmaps"; version="0.0.8"; sha256="1y61xdhb67w0dmjmxa40pbzfjj6bpik477jf3dm61qjnfp4a1l4l"; depends=[ggplot2]; }; - ggtern = derive2 { name="ggtern"; version="2.1.0"; sha256="0icmw8cfm0ciay7vw7gfifq7mvccfq00qx167dh9nai12kkgnr0c"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; - ggthemes = derive2 { name="ggthemes"; version="3.0.2"; sha256="0nx4sswvzr8qr54pmxk7qqj85ayajpiakzz33sf27s622bh0gndd"; depends=[assertthat colorspace ggplot2 scales]; }; - ggvis = derive2 { name="ggvis"; version="0.4.2"; sha256="07arzhczvh2sgqv9h30n32s6l2a3rc98rid2fpz6kp7vlin2pk1g"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; - ghit = derive2 { name="ghit"; version="0.2.5"; sha256="1164j18hh1jaziirvlrc0prmib0ph4dw16krpksxxymy6xxsvi9s"; depends=[git2r]; }; - ghyp = derive2 { name="ghyp"; version="1.5.6"; sha256="0y3915jxb2rf01f7r6111p88ijhmzyz4qsmy7vfijlilkz0ynn20"; depends=[gplots numDeriv]; }; + ggrepel = derive2 { name="ggrepel"; version="0.6.5"; sha256="0lm78662p1iajkcvq82g08zsv3s4lfmkpggg1wk9wpvmk78yj2in"; depends=[ggplot2 Rcpp scales]; }; + ggsci = derive2 { name="ggsci"; version="2.0"; sha256="1045yi825lynw074cqi7r596ldbn7snj0rzdqcb5iwl5cn2s7gcw"; depends=[ggplot2 scales]; }; + ggseas = derive2 { name="ggseas"; version="0.5.1"; sha256="1r23j701rvia49si42fbi6zws7x9r92h1bcp0a15h28hpl7zlp7l"; depends=[ggplot2 seasonal zoo]; }; + ggsn = derive2 { name="ggsn"; version="0.3.1"; sha256="1q1bba9pcr51m7hxz07d0ycbl93ln4cgkkw17acbfipmbaack5f0"; depends=[ggplot2 maptools png]; }; + ggspectra = derive2 { name="ggspectra"; version="0.2.0"; sha256="0x0q7sa3i4z52wifbpi5q7hwqw79cz599f3mcln8qkd8fkz7fg96"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; }; + ggstance = derive2 { name="ggstance"; version="0.3"; sha256="0sr84nasr8x8ib3mdsjck73gbfg9xba50s5nxdij0ah9xqnpyhpi"; depends=[ggplot2 lazyeval plyr purrr]; }; + ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; + ggtern = derive2 { name="ggtern"; version="2.2.0"; sha256="0ddcbbgp8ni3zbz4ailqx79i16aa2x4z4gvz55f0b731bilczw86"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; + ggthemes = derive2 { name="ggthemes"; version="3.4.0"; sha256="1jj8lp7jbk3489kpgbw4b5phpn01gkfmksc21c6sn3x6wmzyn6hs"; depends=[assertthat colorspace ggplot2 scales]; }; + ggvis = derive2 { name="ggvis"; version="0.4.3"; sha256="1p7c8f83da30grj5n0v80p5djp6z0r62z5zqpv2a3ahn61w1gm9l"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; + ghit = derive2 { name="ghit"; version="0.2.15"; sha256="07f7bz0n2bzs3m3q1hsld15n10nkk7ziwl37lxsf2gh9yv7xvfb3"; depends=[git2r]; }; + ghyp = derive2 { name="ghyp"; version="1.5.7"; sha256="195hsskh2ykafqr93f675xqsmhbrki3abi61hk78bzy09n1d4jfk"; depends=[gplots numDeriv]; }; giRaph = derive2 { name="giRaph"; version="0.1.2"; sha256="137c39fz4vz37lpws3nqhrsf4qsyf2l0mr1ml3rq49zz4146i0rz"; depends=[]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; - gimme = derive2 { name="gimme"; version="0.1-6"; sha256="164ayfhf532iv0ja87z5aigrbfngxs8naxdnh041lw431mchvrp6"; depends=[doParallel doSNOW foreach gWidgets2 igraph lavaan MASS qgraph snow]; }; - gimms = derive2 { name="gimms"; version="0.5.1"; sha256="149jk2j2vzvcn4pk78ha2vbjwq24kd42mvhkhw1ihmnjg6yjw7j3"; depends=[doParallel foreach Kendall raster zyp]; }; + gimme = derive2 { name="gimme"; version="0.2-0"; sha256="0x2j4041rah6bi99z8syypg3w8zzkdkxymmdz33rgc7azx799cps"; depends=[gWidgets igraph lavaan qgraph]; }; + gimms = derive2 { name="gimms"; version="1.0.0"; sha256="0f959gr4nzf9p2gpvdrzlndp24g2hhzc0wbkgpbs056wp8ij0mws"; depends=[Kendall raster RCurl zyp]; }; gistr = derive2 { name="gistr"; version="0.3.6"; sha256="1rajdfb8zkx444v89iapzrdad8y81rhd9q9nwcxw03jig4xm48mb"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; - git2r = derive2 { name="git2r"; version="0.14.0"; sha256="0jkkrggffpflaaw0gn2hnm1wz83xs31amriim481g73zf30g2bpr"; depends=[]; }; + git2r = derive2 { name="git2r"; version="0.18.0"; sha256="0bgzdsdi9n6l8pchivs6a2g4ksa56qs8hygpyv2c0ndqmx4jxcwi"; depends=[]; }; + gitgadget = derive2 { name="gitgadget"; version="0.2.1"; sha256="02jmp5lnk156sfqlv91jn42xds98ihya1x2f97cfwpzlas5qrxky"; depends=[curl dplyr jsonlite miniUI rstudioapi shiny]; }; + githubinstall = derive2 { name="githubinstall"; version="0.2.1"; sha256="0vcc1s4ywaz8fjsg99knlxms4505wpvl08g48ndxcp3fqzvfc8i7"; depends=[curl data_table devtools httr jsonlite]; }; gitlabr = derive2 { name="gitlabr"; version="0.6.4"; sha256="1x1s2wcfgzxbqjrrn9f5003q5x4ri19r6gbkd55qgqxnc1cg27gb"; depends=[base64enc dplyr functional httr magrittr stringr]; }; gitter = derive2 { name="gitter"; version="1.1.1"; sha256="10m4rs6mhg7xn8dfd41ai0bnn5bnxn6cgqip22hrrpj0i2lzky6l"; depends=[EBImage ggplot2 jpeg logging PET tiff]; }; - gjam = derive2 { name="gjam"; version="1.0"; sha256="1g85syk4cjrgvqwfjh63wzib9h7qpfg4l5qfa8lq9qz6m6g36gvb"; depends=[Rcpp RcppArmadillo]; }; - gkmSVM = derive2 { name="gkmSVM"; version="0.65"; sha256="0k51mpcrddvxbvisn8aiwyh3iy1kwy7h0x1zl46wldy7s33d3576"; depends=[kernlab Rcpp ROCR seqinr]; }; - glamlasso = derive2 { name="glamlasso"; version="1.0"; sha256="050xa2s60zm59p7ydxm3gkm2k6lhkdqkby212f5f1dd89q53gdxp"; depends=[Rcpp RcppArmadillo]; }; - glarma = derive2 { name="glarma"; version="1.4-0"; sha256="1fwygp3baj4a5kfla0phaama81ry5s3i4vdx9hfj4y9m5wzg87dv"; depends=[MASS]; }; + givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; + gjam = derive2 { name="gjam"; version="2.1.1"; sha256="12r7amkzvklj4b52199hwwxgimvqgnbnylzdkxgfql9n8zcbgx3j"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gk = derive2 { name="gk"; version="0.4.0"; sha256="0nm7aam78mn0a7mvqk1cy7kw4aps7rbx26c85jlklknjyic99cav"; depends=[]; }; + gkmSVM = derive2 { name="gkmSVM"; version="0.71.0"; sha256="1zpxgxmf2nd5j5wn00ps6kfxr8wxh7d1swr1rr4spq7sj5z5z0k0"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; + glamlasso = derive2 { name="glamlasso"; version="2.0.1"; sha256="1x87nv29r309l539qccbcll4kn889sdds6gvrhyvw68rs370pn2l"; depends=[Rcpp RcppArmadillo]; }; + glarma = derive2 { name="glarma"; version="1.5-0"; sha256="1afcccjayz6sj39mcg9h54d7dd1as8l63nxfw17bdh18zidr6ghi"; depends=[MASS]; }; glasso = derive2 { name="glasso"; version="1.8"; sha256="0gcapw7kyxb19wvdyxq1vsmc5j7yyd0rvqxs2i71k31q352sg6zw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; glcm = derive2 { name="glcm"; version="1.6.1"; sha256="0xzfhafc7326v3g1xngp584039iknw3q3bcx8f0j4ig125in7sxk"; depends=[Rcpp RcppArmadillo]; }; - gld = derive2 { name="gld"; version="2.3.2"; sha256="15l6lg49rypasglc1y8mjp5a6s7blymbyclavhyjs0nkaq5flrb7"; depends=[e1071]; }; + gld = derive2 { name="gld"; version="2.4.1"; sha256="0ycm3w8s5bm5w2lqy0qa877cwjcwc9x1zyyyrknwwjjxip250iaw"; depends=[e1071 lmom]; }; gldist = derive2 { name="gldist"; version="2160.2"; sha256="1dcf3pb4xqvhqj4m3xc3ihzjbzxjspjrnc8819hmlnmdd0csghmx"; depends=[]; }; - glinternet = derive2 { name="glinternet"; version="1.0.0"; sha256="0aa75xq2w64iknbyl6qw9ckk8v64a96xz0ar1mbqd8zhx0xvibyy"; depends=[]; }; + glinternet = derive2 { name="glinternet"; version="1.0.3"; sha256="1f3c4c8jjfslp5wc4mc3sc64qpin8bswz1fnv5zqg8dr4j8afq10"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.35"; sha256="1m9asamh2yha9q8mrllvvc9qj2im6cspvfpafzc8krmh17zq4ins"; depends=[]; }; glm_ddR = derive2 { name="glm.ddR"; version="0.1.0"; sha256="0siwy8jx0r0135sm8gyf8g7w05r3zlq6bns5f2s348njk19da9mn"; depends=[ddR Matrix]; }; + glm_predict = derive2 { name="glm.predict"; version="2.4-0"; sha256="10cpbl25csfs2ng7jj7hcfwl58akbx5dsdv1qlgbnvhf9rmlblww"; depends=[iterpc MASS nnet]; }; glm2 = derive2 { name="glm2"; version="1.1.2"; sha256="1x9pq2ddsz9al8w044qch34s3fahca63dz85lvm5qn16945ccw1s"; depends=[]; }; + glmBfp = derive2 { name="glmBfp"; version="0.0-48"; sha256="1r8mc55v717g4666f07hkc13v9vhj96n7xvn2r3crjndq3w5x3yn"; depends=[coda Rcpp RcppArmadillo rms Runuran statmod survival]; }; + glmbb = derive2 { name="glmbb"; version="0.2"; sha256="1ifiiixj2ip8mqdk3riaf1y60sv1asr0kmcmbjnhpwxd46k8kkpw"; depends=[digest]; }; glmc = derive2 { name="glmc"; version="0.2-4"; sha256="03m1ym9w0b0gqib13pnh1yrjijlcwsn5lijg0nsr4hd6gxw29cla"; depends=[emplik]; }; glmdm = derive2 { name="glmdm"; version="2.60"; sha256="09vljki24fccqkvxkmg2i6a8pxqhfwm155b41m2q51lqaq29bfw7"; depends=[]; }; glmgraph = derive2 { name="glmgraph"; version="1.0.3"; sha256="16sq6i7kbw20nvwikpa02z3pb7wqw3270j6ss7f8sgf548skhmx0"; depends=[Rcpp RcppArmadillo]; }; glmlep = derive2 { name="glmlep"; version="0.1"; sha256="0jnm3cf2r9fyncxzpk87g4pnxbryqcxxrc5y2a80pv48al3sxlzk"; depends=[]; }; - glmm = derive2 { name="glmm"; version="1.0.4"; sha256="0mcdy8aa5dlscrdahnd7jn9ip28jzipp4imv6cyk8fkkmiy60qhx"; depends=[Matrix mvtnorm trust]; }; - glmmBUGS = derive2 { name="glmmBUGS"; version="2.3"; sha256="1j96c1c2lqplhjvyigpj494yxj85bpmc7cnd1hl1rc8b552jr192"; depends=[abind MASS]; }; - glmmGS = derive2 { name="glmmGS"; version="0.5-1"; sha256="1aqyxw3nrjri8k8wlwvddy25dj7mjqndssd5p5arax8vaqgrdnjz"; depends=[]; }; - glmmLasso = derive2 { name="glmmLasso"; version="1.4.1"; sha256="162b3mmx6997hlx4fpd3wpvwq5axzx2fvywljsn05a10c6cfszvc"; depends=[Matrix minqa]; }; - glmmML = derive2 { name="glmmML"; version="1.0"; sha256="0b1q5mj325xga3lfks28r03363bjfa31rlgjzwk4s0a6g21bdl4a"; depends=[]; }; + glmm = derive2 { name="glmm"; version="1.1.1"; sha256="0jswwrdc2k99kcqnbh1dg5j3z98l4x8v5kfdlxk5yxfi1ik6r3p5"; depends=[Matrix mvtnorm trust]; }; + glmmBUGS = derive2 { name="glmmBUGS"; version="2.4.0"; sha256="1clnnf0ja2xiqdgi2f1xs04hhi13rnp8jzzdjncbqbdzk2ic3ynl"; depends=[abind MASS sp]; }; + glmmLasso = derive2 { name="glmmLasso"; version="1.4.4"; sha256="0f03zj1hbxp4cpn0ffwisf52gcfdyp7sbm49zxi7g7xpv7v87pja"; depends=[Matrix minqa]; }; + glmmML = derive2 { name="glmmML"; version="1.0.1"; sha256="0lfxhx0mr0ph8fg28nnb37p2lndjayzhv07wksx9ic8gpi0cm6my"; depends=[]; }; + glmmTMB = derive2 { name="glmmTMB"; version="0.1.1"; sha256="1ckij5jrqijwljqkj624q6li0bv8vxb3aglwbfi034zc0iwiba1b"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; glmmsr = derive2 { name="glmmsr"; version="0.1.1"; sha256="07z4j7845hz3hcv438njnqf1yfp8prqby03h3s1ql1w8d342670i"; depends=[BH lme4 Matrix R6 Rcpp RcppEigen]; }; glmnet = derive2 { name="glmnet"; version="2.0-5"; sha256="1cbpzmbv837fvq88rgn6mgzgr9f1wqp9fg8gh2kkmngvr1957a9c"; depends=[foreach Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.2"; sha256="1pyg23hdqksiaqdcrsaqz9vb7mgclm41hh0vb7ndkdv284bzzlbz"; depends=[glmnet]; }; @@ -4527,62 +5649,80 @@ in with self; { globalGSA = derive2 { name="globalGSA"; version="1.0"; sha256="1f3xv03m6g2p725ff0xjhvn2xcfm7r7flyrba080i4ldy6fd8jg8"; depends=[]; }; globalOptTests = derive2 { name="globalOptTests"; version="1.1"; sha256="0yf4p82dpjh36ddpfrby7m3fnj2blf5s76lncflch917sq251h4f"; depends=[]; }; globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; }; - globals = derive2 { name="globals"; version="0.6.1"; sha256="0bwkk574b44ndm1frv16rhv5c200q1f6402k97d19gwh6rihw2h1"; depends=[codetools]; }; + globals = derive2 { name="globals"; version="0.8.0"; sha256="0882vpjsl9f5jld3bldgl6y1kdncl9gk3m6amigmpgcd9a6v7pm2"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.1-2"; sha256="11y3dbi3x3idlwhzr5s2g976myci91l1qlsfyny732gb7q32c79w"; depends=[]; }; glogis = derive2 { name="glogis"; version="1.0-0"; sha256="19h0d3x5lcjipkdvx4ppq5lyj2xzizayidx0gjg9ggb1qljpyw9m"; depends=[sandwich zoo]; }; glpkAPI = derive2 { name="glpkAPI"; version="1.3.0"; sha256="0173wljx13jali2jxz4k5za89hc64n2j9djz5bcryrqhq4rmkp87"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; - glycanr = derive2 { name="glycanr"; version="0.2.0"; sha256="09v4xs1fxl9iiqcw66wz09ap3nbmr76f8mihjy06byrqxqjy07j9"; depends=[coin dplyr ggplot2 tidyr]; }; - gmailr = derive2 { name="gmailr"; version="0.6.0"; sha256="1l0lnlq5vrxrab8d9b5hwm8krg8zgx8f8m0kfnryyyrqkjrksky5"; depends=[base64enc httr jsonlite magrittr mime]; }; - gmapsdistance = derive2 { name="gmapsdistance"; version="1.0"; sha256="14hwwnzx5jd8r2v34066pa59ngvxbmzhni0nc9hg7i3p0gzbfw4b"; depends=[RCurl XML]; }; + glycanr = derive2 { name="glycanr"; version="0.3.0"; sha256="1s3xhg31xc3x4gzxjpn9mbb7dw4m49na2mdlgr5wh1z9gxdc06pa"; depends=[coin dplyr ggplot2 tidyr]; }; + gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; + gmailr = derive2 { name="gmailr"; version="0.7.1"; sha256="1gniwwl0ci0wm7a3ai2lqrr590smmkdgyf3aarw6bdygn8hr3s3y"; depends=[base64enc crayon httr jsonlite magrittr mime]; }; + gmapsdistance = derive2 { name="gmapsdistance"; version="3.1"; sha256="1hsijd1ahsppmxpnx690s27lry1w3c8r9jynhj0rsr4w6jmxikc2"; depends=[RCurl XML]; }; gmatrix = derive2 { name="gmatrix"; version="0.3"; sha256="0ni5scx48m99jg9a5l93qvfkz6v5m7d5c0fwhp14mgiw32ff1s1r"; depends=[]; }; gmeta = derive2 { name="gmeta"; version="2.2-6"; sha256="1zq5prig4mq6i8gkaynv8p786dbwh670bv0mapwmyns1r0yarzkm"; depends=[BiasedUrn binom]; }; gmm = derive2 { name="gmm"; version="1.5-2"; sha256="1phd8mmfyhjb72a45gavckb3g8qi927hdq0i8c7iw1d28f04lc70"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-1"; sha256="0pdbky9gm8s3dvyg6z7pvn7wzqlbvdg7y0py9kcwfxxjvwcp1qwh"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.16.2"; sha256="0zf4krlvdywny5p5hnkr0r0hync6dvzc9yy4dfywaxmkpna8h0db"; depends=[gdata MASS]; }; - gmp = derive2 { name="gmp"; version="0.5-12"; sha256="10fpvcli526a8j6jaryn0mwk78c24xy7whdpcvqzzvb41l6nnkma"; depends=[]; }; + gmp = derive2 { name="gmp"; version="0.5-13"; sha256="0gng529l8nkazrlypsmc50gd0sn8zgkw7xc2ymrwkykiv1lcwdv2"; depends=[]; }; gmt = derive2 { name="gmt"; version="1.2-0"; sha256="09az2iwwhyrls4mr619vwzhzmaks6klm67lnir48bh40hynsvibp"; depends=[]; }; gmum_r = derive2 { name="gmum.r"; version="0.2.1"; sha256="127h76nm99ldpaznys5y4rnrvq0kh5pcsjmw21hz79a8rjni7r16"; depends=[BH ggplot2 httr igraph Matrix Rcpp RcppArmadillo SparseM]; }; gmwm = derive2 { name="gmwm"; version="2.0.0"; sha256="1cjmd0758ggjkpf5mkfdhwl121yv84gm1cwg6b2c1r8pd3wcqx57"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 scales]; }; + gnlm = derive2 { name="gnlm"; version="1.1.0"; sha256="0fv89cvbnp9n3lgg6y4sqmz9jzcgwj7vd92rwg7hixwrjyqpan4z"; depends=[rmutil]; }; gnm = derive2 { name="gnm"; version="1.0-8"; sha256="1581lzkb1v3y0arrq7x1bg7c91cii87bifxcdi1jzyc5rxj261la"; depends=[MASS Matrix nnet qvcalc relimp]; }; - gnmf = derive2 { name="gnmf"; version="0.7"; sha256="00y1dx1c66gv769yiwnb91xbr77wpidf36x0n0dzaqfn7s9yh6xq"; depends=[]; }; - gnumeric = derive2 { name="gnumeric"; version="0.7-4"; sha256="0q9qrwwkrwcdh5c1prh7d8j4raca59vgaxx7rjh36cml372vkrai"; depends=[XML]; }; + gnmf = derive2 { name="gnmf"; version="0.7.1"; sha256="1vbcsxg61mlsdir8szd0rdxfswr7kr6a07750ar2l9b4rkg3yfqz"; depends=[]; }; + gnumeric = derive2 { name="gnumeric"; version="0.7-6"; sha256="0d8igplypw40kshg9skij0cymc6j5hmbmqhbfpm0v2q3kw5r9d3p"; depends=[XML]; }; goalprog = derive2 { name="goalprog"; version="1.0-2"; sha256="1h3nd3d53hbz5hl3494lpfjnp1ddklc17nhgw18362jd1nk14awy"; depends=[lpSolve]; }; + goeveg = derive2 { name="goeveg"; version="0.3.3"; sha256="1p66fc1vr09zxp1h81b8by2cldxn0q8vivcc5g3pggb65d9wj846"; depends=[fields mgcv vegan]; }; gof = derive2 { name="gof"; version="0.9.1"; sha256="1s12gga9d6yizn2y7lzql4jd80lp5jpyml8ybn7xqswp8am82vpg"; depends=[]; }; - gofCopula = derive2 { name="gofCopula"; version="0.1-2"; sha256="09yczngqw6y9gx0fkwq5r80w44w8zng0mcxlman16mnlk6qcb0f7"; depends=[copula numDeriv SparseGrid VineCopula]; }; - goft = derive2 { name="goft"; version="1.2"; sha256="1ic3dw287rkpnj7farsj44fy21q3a46krnvaq6clmqqlgwinwajv"; depends=[gPdtest mvShapiroTest]; }; - goftest = derive2 { name="goftest"; version="1.0-3"; sha256="0rwz8y23dsklwvmd4sxq0bcklsa7l47lbs5lkcdn58jsdzm7bfrq"; depends=[]; }; + gofCopula = derive2 { name="gofCopula"; version="0.2-3"; sha256="1xigbv9mc0c1j3qc0nay0fjwmqvw91cy3x1z6m56bgkgfli7gp2l"; depends=[copula doParallel foreach MASS numDeriv R_utils SparseGrid VineCopula]; }; + gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; }; + gofastr = derive2 { name="gofastr"; version="0.2.1"; sha256="1a291bddhzk0wxrmk9dpiiv93h6si8s19v00wmypw0jfbrjhlc53"; depends=[data_table quanteda slam SnowballC tm]; }; + goft = derive2 { name="goft"; version="1.3.1"; sha256="079p0l4w630j87h0xwk3wxpnd5779by507mffkwgj4qx4ljjfnqr"; depends=[fitdistrplus]; }; + goftest = derive2 { name="goftest"; version="1.0-4"; sha256="0rp8qlcv0az49gxplxycz4q9l66z8y69jg4kwzfn78l5z6qdvq5s"; depends=[]; }; + gogamer = derive2 { name="gogamer"; version="0.4.3"; sha256="0p11pxwc4vnmf2hh0zxv99qlqkqiszqawh8scw4v861i8ihp84iz"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp scales stringr]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; - googleAuthR = derive2 { name="googleAuthR"; version="0.2.0"; sha256="1wbysvm8lafyjwva68hjggphb1i4nzp2mr00ywj42zlk30n17skk"; depends=[httr jsonlite R6]; }; + goldi = derive2 { name="goldi"; version="1.0.0"; sha256="1asn5r8klmpizmp8bfapfy5vraf7sxswm3fky6473hxajz4hyfvw"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; + googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.3.0"; sha256="1zjldi93g5871dw1vdxriw08rz5hrmpx530r76s6r0rlijs9lwal"; depends=[bigQueryR dplyr googleAuthR googleCloudStorageR jsonlite magrittr shiny tidyjson]; }; + googleAuthR = derive2 { name="googleAuthR"; version="0.4.0"; sha256="00dm7ccfm2sk3qmgffs3dx809ihwfhw49f6fsgnllm19qyxf5hl0"; depends=[devtools formatR httr jsonlite miniUI R6 roxygen2 shiny testthat]; }; + googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.2.0"; sha256="02l3jml2sqw4m7fralr3dzyk06h8jinn6bi54gwc02f1y84j8qfh"; depends=[googleAuthR httr jsonlite readr testthat]; }; + googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.1.0"; sha256="173y7m2j6iw848djjawkiy22fg56hnpx0m0q1halzwycqx6z08vc"; depends=[future googleAuthR jsonlite]; }; googlePublicData = derive2 { name="googlePublicData"; version="0.15.7.28"; sha256="1bkfj88rn8ai0kbjbd0s3zih6iz018xybr13w2h9i6wdi3dhs75s"; depends=[XLConnect XML]; }; - googleVis = derive2 { name="googleVis"; version="0.5.10"; sha256="00lh8nx8qims9zrb664m7g4psw2p5qwmmkb7gxlizmp1fccwvlq5"; depends=[RJSONIO]; }; - googleformr = derive2 { name="googleformr"; version="0.0.1"; sha256="17v82njhnzp8p3lbd17dyxcv7p5vs0ivwq30asgv1mzpm19jm074"; depends=[httr magrittr rvest xml2]; }; - googlesheets = derive2 { name="googlesheets"; version="0.2.0"; sha256="07lyxjn2iqxwgngj3rfddq08d8ip8iyfs32kf7f4ncy4swk91lmp"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tidyr XML xml2]; }; - goric = derive2 { name="goric"; version="0.0-8"; sha256="0ayac0yfkxrl13ckc2pwfqnmsrhmbg5bi6iwzx0fmh81vrlp0zrm"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; + googleVis = derive2 { name="googleVis"; version="0.6.2"; sha256="1idnp9ndgg2dwybdpw7q3pkaw9kw2vy2xkls9qykrpz1p6nf3mn1"; depends=[jsonlite]; }; + googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; }; + googlesheets = derive2 { name="googlesheets"; version="0.2.1"; sha256="0ps13h1cv7fj5dh8s4nvwi64wnnyqdsadcaa4iizq1c5s615cwk3"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tidyr xml2]; }; + googleway = derive2 { name="googleway"; version="1.0.0"; sha256="01gzpb48iffir57cqw9hs2s4rxdllvdjf5hkmrf5zkjxhbzw7w14"; depends=[curl jsonlite Rcpp]; }; + goric = derive2 { name="goric"; version="0.0-95"; sha256="05sbsnjjlpy1z0mfbsrihrp2gp4d66cvprhgzxy76lipgm5mmvqi"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; + gower = derive2 { name="gower"; version="0.1.1"; sha256="04k1c9h27wknp5bvzxq6gzv3yccmfhs3whnaic1phz4f9vx5g6bz"; depends=[]; }; gpDDE = derive2 { name="gpDDE"; version="0.8.2"; sha256="100g2f8zlpbwxb46h62pgvidll8aflz1zl4inyh8dml6vhm9pilp"; depends=[CollocInfer deSolve fda forecast lars limSolve MASS nnls penalized trustOptim TSA]; }; gpairs = derive2 { name="gpairs"; version="1.2"; sha256="09mkdbs9hklxnmqcsnf65s3dfsfcr7kppp6zxj08v5hxym1gpz3l"; depends=[barcode colorspace lattice MASS vcd]; }; gpclib = derive2 { name="gpclib"; version="1.5-5"; sha256="08j81b8wymsgin20n54gvm6m54rmdic51p6qzs9cz4pmgl7dkkjv"; depends=[]; }; + gpg = derive2 { name="gpg"; version="0.4"; sha256="081b2s491hcy2azyqwlzr5xh5bbvinhnlqr21w6w02rxvib6p3jj"; depends=[curl]; }; gpk = derive2 { name="gpk"; version="1.0"; sha256="1zfhkqyypb24mhbj2zi9qy3gw0kqxvlp8j5ni3zm7k5rz1bnrygg"; depends=[]; }; - gplm = derive2 { name="gplm"; version="0.7-2"; sha256="0pr39fbkv61iwd110lq76p2fi4dvx9qz6mjsvg6bpja9pfbb6wc0"; depends=[AER]; }; - gplots = derive2 { name="gplots"; version="2.17.0"; sha256="0dyysysl595khv00m4h68s7zx7xlfnpxzfkc49av1s3fc58bvmr5"; depends=[caTools gdata gtools KernSmooth]; }; + gplm = derive2 { name="gplm"; version="0.7-4"; sha256="0apvj14nl5qbi4dhhdx5nih5lvjwfcipvr8cyk6xsz4r5gfr2iw4"; depends=[AER]; }; + gplots = derive2 { name="gplots"; version="3.0.1"; sha256="02nb8n3s7c1zxq2s7ycaq2ys72y7mzirxrwj954h6gdc4x1zhg9l"; depends=[caTools gdata gtools KernSmooth]; }; gpmap = derive2 { name="gpmap"; version="0.1.1"; sha256="00jhslbxbp6dgq7bw346hfpw0gans048vsn7chyzjhyr7ah5xrfg"; depends=[foreach ggplot2 isotone plyr]; }; gpr = derive2 { name="gpr"; version="1.1"; sha256="03ywik11kc6cnaqrzzzi94jkrdbd378m3sf26f2vpb7d834nl728"; depends=[]; }; gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; }; - gpuR = derive2 { name="gpuR"; version="1.1.0"; sha256="1a5x9yy5iyyrvrzbiwnzlcr9ykd3cn6y29n9c5zlky1q8ivagsxy"; depends=[assertive BH Rcpp RcppEigen RViennaCL]; }; - gputools = derive2 { name="gputools"; version="1.0"; sha256="0zaib7f7mnx0pa7kxkza7m097d1zfn1ci8x9i8q4syfi06cs3s6n"; depends=[]; }; - gquad = derive2 { name="gquad"; version="1.0-0"; sha256="0rfhcc7c0lfn4hqwcbly1kdpna9kr5ryvan279iydysv5iha96rr"; depends=[ape seqinr]; }; + gpuR = derive2 { name="gpuR"; version="1.2.1"; sha256="1k9nxsz4grjl8lyf9108vj94g2gpi6h0pbf5l63y2h5rn0lmpw8s"; depends=[assertive BH Rcpp RcppEigen RViennaCL]; }; + gputools = derive2 { name="gputools"; version="1.1"; sha256="0np1lndvppdi409a1kfbbl0z5hr8wg2q473jch58zd16d2ickwkb"; depends=[]; }; + gquad = derive2 { name="gquad"; version="2.0-0"; sha256="0d2mg21ix1a08lk43mz0r84q49yhgh7w9jyxa89lmx9ihzl42nhx"; depends=[ape seqinr]; }; grImport = derive2 { name="grImport"; version="0.9-0"; sha256="1d8fd7502qj7cirjqdkr1qj51rylw2fz5hs06avfvc2dxs2xwfw1"; depends=[XML]; }; + gradDescent = derive2 { name="gradDescent"; version="2.0"; sha256="0qfm9vzi8j083na5ziwjypycbw6ncwk75xsaam2vc4xhfarw8fjs"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; - gramEvol = derive2 { name="gramEvol"; version="2.1-2"; sha256="18i97pj58scqpxhphn1cnb0n9a94ki0i6fgi1f99mrk17w2jwmi8"; depends=[]; }; + gramEvol = derive2 { name="gramEvol"; version="2.1-3"; sha256="0z2511zhs2gcdkwp29n6fpafhn49h69yi56nmrhh9zc8jqj1rwpa"; depends=[]; }; granova = derive2 { name="granova"; version="2.1"; sha256="161fznqlnwmw53abmg2n62lhxxda7400ljnadvcdvsm8f6kcjf80"; depends=[car]; }; granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; - graphTweets = derive2 { name="graphTweets"; version="0.3"; sha256="0kfj02pwg5jpq5barw7yr4ym3jhm6b2shk4a47yw7841rv93pdiz"; depends=[dplyr igraph reshape2]; }; - graphicalVAR = derive2 { name="graphicalVAR"; version="0.1.3"; sha256="0awbcx8qb77r4qb90xinp49glwbkvyfb5f5y2qrjk8rr2jd62j0s"; depends=[glasso glmnet Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; - graphicsQC = derive2 { name="graphicsQC"; version="1.0-7"; sha256="14xpczrxaxzm02figrnzgz4a7g4r4rd1j9mfh0lw6xnbj2wf0p13"; depends=[XML]; }; - graphscan = derive2 { name="graphscan"; version="1.1"; sha256="1v56g1gzlls78mdad9wllyq7zywmjzamrcxw0pk655nwjbqfiyw5"; depends=[ape rgl snowfall sp]; }; + graphTweets = derive2 { name="graphTweets"; version="0.3.2"; sha256="13kab1nz85ghs5n882ss513di30b7lg72h676v37404ypj5a1vi1"; depends=[dplyr igraph reshape2]; }; + graphicalVAR = derive2 { name="graphicalVAR"; version="0.1.4"; sha256="09qrndfxxjfc8l2g6p4si6w9khz0gjmr7fisbvw395bf2vxvd47i"; depends=[dplyr glasso glmnet Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; + graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; + graphql = derive2 { name="graphql"; version="1.2"; sha256="03rmxpd1g9r1hgv9r3mrwf5pp4013cpqvbg385ywfm8l1c3j0a3z"; depends=[jsonlite Rcpp]; }; + graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; - greport = derive2 { name="greport"; version="0.5-3"; sha256="0cd7rqzrk1yb22ksbmva1fl9k388bxxm586c20j8k8z5zympi9g1"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; + grattan = derive2 { name="grattan"; version="1.3.0.3"; sha256="1k8ynf6wazjhsr0m3wy39s6833cd5j906awxkr2yhy5dfwy4jfhr"; depends=[assertthat data_table dplyr forecast lazyeval lubridate magrittr purrr Rcpp rsdmx zoo]; }; + gravity = derive2 { name="gravity"; version="0.3"; sha256="0makhi5hfs2x891ss6whq49rp73j6h5x5m4dvd0d175y06n4hg3s"; depends=[lmtest multiwayvcov sandwich]; }; + greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; + grex = derive2 { name="grex"; version="1.4"; sha256="0jj0473q06ym410glnma7sbqn9z0l0j0i5kw3mqynjs3blr03d7w"; depends=[]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; @@ -4590,74 +5730,93 @@ in with self; { gridGraphics = derive2 { name="gridGraphics"; version="0.1-5"; sha256="1fsw699xk56iiwscrf98a1b0m2xpmvfqqsb7aja49fhv8qam6szf"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; gridSVG = derive2 { name="gridSVG"; version="1.5-0"; sha256="15d35066213hwsxsvmnqxqm4wim850645jwajw4pa190v8sapl89"; depends=[RJSONIO XML]; }; + gridsample = derive2 { name="gridsample"; version="0.1.3"; sha256="169jsvavn46iaczf9j9zh41ila3vv7i8bapsbdy39sifwadqqw4y"; depends=[data_table geosphere maptools raster rgdal rgeos sp spatstat]; }; + gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; groc = derive2 { name="groc"; version="1.0.5"; sha256="1kqcdyq1y80gd62jpn38yz6q1qmg84b7k8qcniip5h948vfzkddg"; depends=[MASS mgcv pls robust robustbase rrcov]; }; grofit = derive2 { name="grofit"; version="1.1.1-1"; sha256="1rnym5fxbg3bin2idmymrwvf1fcd646bipbgjd6wby8my69zy4c5"; depends=[]; }; gromovlab = derive2 { name="gromovlab"; version="0.7-6"; sha256="02s7x23610dbpmrqh7pimspa10v3fnmj48fwmh0a6igd74rmj2mg"; depends=[ape cluster glpkAPI igraph quadprog]; }; groupRemMap = derive2 { name="groupRemMap"; version="0.1-0"; sha256="1bfp746j0dx7kk44nyjqmimvgw14par9ayvqxnzldc05qsazjdwx"; depends=[]; }; + groupdata2 = derive2 { name="groupdata2"; version="0.1.0"; sha256="1kqmwjf06bnm0fbvcsicfrkgl7kn42v5bip1m9riiqmk4wh2bkqx"; depends=[dplyr plyr]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; - growcurves = derive2 { name="growcurves"; version="0.2.4.0"; sha256="1ybhcw3kjsgpssilsg1kdg0az61s16mi1cbk4qgcvsb291f3m4i3"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; }; - growfunctions = derive2 { name="growfunctions"; version="0.12"; sha256="08ip90k36hq2c6zp1ys27xb9n5d2aafw8carj6vjszb057khmnxh"; depends=[ggplot2 Matrix mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; - growthcurver = derive2 { name="growthcurver"; version="0.2.0"; sha256="062azq7fix1cpbx779636zv404z75niz40grxfqsh02afabg5ki4"; depends=[caTools minpack_lm]; }; + grove = derive2 { name="grove"; version="1.0"; sha256="1w8qz2k6m2xm0n699dj69aiagxy728q66bphxbmn71kakymvkgnz"; depends=[Rcpp RcppArmadillo wavethresh]; }; + growcurves = derive2 { name="growcurves"; version="0.2.4.1"; sha256="0h96c1hd6cdzc2l2a9dakmxn2hspvr0fpx9938iscm4hi9ds97m2"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; }; + growfunctions = derive2 { name="growfunctions"; version="0.13"; sha256="19ngsd326vws2f3wsrkcsyzn64fm9nnqvnbamfw6aal9xzzzz59m"; depends=[ggplot2 Matrix mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; + growth = derive2 { name="growth"; version="1.1.0"; sha256="0d1hc56ybp5chckqv5q5jvpgbl7xn9dkbc4dd4sz5gawn1hngbxm"; depends=[rmutil]; }; + growthcurver = derive2 { name="growthcurver"; version="0.2.1"; sha256="0q70g940ggpwnx2cpq2j8ambfbj9sqw6ivyp9cya1nbn05bah9ds"; depends=[caTools minpack_lm]; }; growthmodels = derive2 { name="growthmodels"; version="1.2.0"; sha256="1wy5z77819s3daa0mifafcjfkggsq0ac522yagj86ml3vf7yqppj"; depends=[]; }; growthrate = derive2 { name="growthrate"; version="1.3"; sha256="1ak3yqlm7dnkdjlmikwa57qnf7yd9n1ixz36gv3shr252750x9cd"; depends=[clime Matrix mvtnorm]; }; growthrates = derive2 { name="growthrates"; version="0.6.5"; sha256="1bnp51hlcb2gpm7j9llbnxjgimbrdsshjxl19ka9w1ba423v2ja2"; depends=[deSolve FME lattice]; }; + grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; }; grplasso = derive2 { name="grplasso"; version="0.4-5"; sha256="15bqckq9qjdlllhfpb21vzgi9msbl544alkrz01w1vvb3hk1847y"; depends=[]; }; grppenalty = derive2 { name="grppenalty"; version="2.1-0"; sha256="12hbghmg96dwlscjy6nspgkmqqj4vwq2qcwcz1gp50a08qbmdcrk"; depends=[]; }; - grpreg = derive2 { name="grpreg"; version="2.8-1"; sha256="0n6j4mx2f0khdqz7c7yhmsh6gcxha2ypknqa421qir1nvp0x57c9"; depends=[Matrix]; }; - grpregOverlap = derive2 { name="grpregOverlap"; version="1.0-1"; sha256="09s3gp59z703zqhpnqzqhkd454b5rlq1cgdhcvql2ad4csxxs03x"; depends=[grpreg Matrix]; }; + grpreg = derive2 { name="grpreg"; version="3.0-2"; sha256="1w6q7n1z585abs7kb2yq95dr6rycan0rkiial9q415s5rf71s48j"; depends=[Matrix]; }; + grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; }; grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; }; - grr = derive2 { name="grr"; version="0.9.2"; sha256="07vw0m1ynjanx6520zx8nycmgxj53p3a5bdznaj9zjfqmy9qyjgm"; depends=[]; }; + grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; grt = derive2 { name="grt"; version="0.2"; sha256="0cqjk7yqk2ryx1pgvjd3x8l25hqv92p8rvdr7xw4jkzillllwmhz"; depends=[MASS misc3d rgl]; }; gsDesign = derive2 { name="gsDesign"; version="3.0-1"; sha256="0cixg176ihbkwkcllabr2klc15cssdnfzwklf0q1wd23lmv6aj43"; depends=[ggplot2 plyr xtable]; }; - gsEasy = derive2 { name="gsEasy"; version="1.0"; sha256="0fbcajnczgmf8gr080rmkg2wxfinjyv6wwznism4m4jlycq4cbjj"; depends=[ontologyIndex Rcpp]; }; + gsEasy = derive2 { name="gsEasy"; version="1.1"; sha256="1g68v51wpgb0fq4nb3q4b9hv34f12dlcp6115css7748imz9p99q"; depends=[ontologyIndex Rcpp]; }; gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-4"; sha256="1ay3iamnvg7mbnl1xaxxcyic559bdnfspy883w2bwgy20yhr34yg"; depends=[MASS]; }; - gsbDesign = derive2 { name="gsbDesign"; version="0.96-3"; sha256="03q2lxz6x4zpwnn15a7mda2qv0d5xrsz563y7103gnmdxnxqqsbc"; depends=[gsDesign lattice]; }; + gsbDesign = derive2 { name="gsbDesign"; version="1.00"; sha256="1kbwlpxbr70aagx9jkap9xlw13r1k3y630b08wmmny421sv4zhxl"; depends=[gsDesign lattice]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; gsg = derive2 { name="gsg"; version="2.0"; sha256="17fjl7aw1s814krnszxd4y1d4210bnkrf4kb2fwsycqwcwms5pm7"; depends=[boot mgcv mvtnorm numDeriv]; }; - gsheet = derive2 { name="gsheet"; version="0.2.1"; sha256="02fz7yvav3cl1cdjb6iqbgaiz25r6xnc92kz0b30qlkvv70995cs"; depends=[magrittr rvest stringr xml2]; }; + gsheet = derive2 { name="gsheet"; version="0.4.2"; sha256="1mfpg91855qg0bi6wk0wy58b58lm06jw9fqdl6psqdvnmaf7n2w5"; depends=[httr stringr]; }; gskat = derive2 { name="gskat"; version="1.0"; sha256="19mbif7wr88vk5wlc7m2l4xghjmfj2qd3s8yvjlkawbnjk8x6ib0"; depends=[CompQuadForm e1071 gee geepack Matrix]; }; - gsl = derive2 { name="gsl"; version="1.9-10.1"; sha256="0pbxzn5zkaskaqn308bj8s78v65fngmqkzxms3ji5x6azgcgfzvp"; depends=[]; }; + gsl = derive2 { name="gsl"; version="1.9-10.3"; sha256="00isw2iha5af4s7rr8svqka9mkl9l26l8h2rnk4r7fkhh7fc97sg"; depends=[]; }; gsmoothr = derive2 { name="gsmoothr"; version="0.1.7"; sha256="00z9852vn5pj04dhl3w36yk0xjawniay6iifw1i7fd8g98mgspxp"; depends=[]; }; - gss = derive2 { name="gss"; version="2.1-5"; sha256="19bysbh6n04psv0mgvlhkpkc463f6zfiwbdsvd28fakbzcwwm8h2"; depends=[]; }; + gsrc = derive2 { name="gsrc"; version="1.1"; sha256="12rrp9v0r5qzxcs1l29238nkc1haql1c4vva3vdm26kglpg7qj18"; depends=[Ckmeans_1d_dp dbscan DNAcopy illuminaio limma openxlsx preprocessCore R6]; }; + gss = derive2 { name="gss"; version="2.1-6"; sha256="1vkdhji8xpnq9j2ah3vnfvhyjnkgk406grws4q3gj4csbpkkzh86"; depends=[]; }; gsscopu = derive2 { name="gsscopu"; version="0.9-3"; sha256="0bvhhs5wn4y1dcff2g87f80jdn3i4mdbvdbydsbx80ng38rfxhhg"; depends=[gss]; }; - gstat = derive2 { name="gstat"; version="1.1-2"; sha256="1b7364g38s3w2h958cbvyk94cry1y0k32z5mr5r290yygr2nzqyn"; depends=[FNN lattice sp spacetime zoo]; }; + gstat = derive2 { name="gstat"; version="1.1-4"; sha256="138v8accqwf95a3i980x57wd2j8vmdg1ga44rx9nbjcpyxc5x6mf"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.6-6"; sha256="196x4c3ihf4q3i0v7b1xa6jm8jjld2rsx00qz03n90wfnjdx5idv"; depends=[proto]; }; gsw = derive2 { name="gsw"; version="1.0-3"; sha256="0ca3h567r23bdldic7labk1vbz8hhslw568lacbdcikm8q16hk72"; depends=[]; }; gtable = derive2 { name="gtable"; version="0.2.0"; sha256="0vz7073m0a2q12qzzihrfh5c2kx5jqi5l7z470fxmwqghdllh7l0"; depends=[]; }; gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; }; gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; }; + gtheory = derive2 { name="gtheory"; version="0.1.2"; sha256="1xc1jl69z5csalqk3hx83s53awcl1fjq6p0x2pczhs7dsvwd6lks"; depends=[lme4]; }; gtools = derive2 { name="gtools"; version="3.5.0"; sha256="1xknwk9xlsj027pg0nwiizigcrsc84hdrig0jn0cgcyxj8dabdl6"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; - gtrendsR = derive2 { name="gtrendsR"; version="1.3.3"; sha256="06z58av7fkmnvb0jmz8g5xffdnpm11iz3lvnvq4az7lq33r2vmah"; depends=[ggplot2 googleVis RCurl zoo]; }; + gtrendsR = derive2 { name="gtrendsR"; version="1.3.5"; sha256="0jfriygsgi1pm8kvnnydf7ahqs9m6n4j093am076pc9sfxafjj13"; depends=[ggplot2 googleVis rvest zoo]; }; gtx = derive2 { name="gtx"; version="0.0.8"; sha256="0x71jji2yldi9wpx8d3nldbjfj4930j7zcasayzbylf9094gmg26"; depends=[survival]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; gumbel = derive2 { name="gumbel"; version="1.10-1"; sha256="12rkri8bvgjn0ylf1i4k9vpb8mvbasidvx2479kmis2rc1p07qq7"; depends=[]; }; - gunsales = derive2 { name="gunsales"; version="0.1.1"; sha256="112rir0jsfifp0hwhcnahfyz5fbz6nk8hz7mwz4xfj7jy04m0cbx"; depends=[data_table dplyr ggplot2 readr seasonal stringr x13binary zoo]; }; + gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; }; + gutenbergr = derive2 { name="gutenbergr"; version="0.1.2"; sha256="0agzc3ry8bm5fsn3pikr6hsmhdjrf8sln56c2wwl0vlm7p2gjca8"; depends=[dplyr lazyeval purrr readr rvest stringr urltools]; }; gvc = derive2 { name="gvc"; version="0.5.2"; sha256="0cfvli6ap5kw3agv94d7g7rhmlxd66yyngc7c9pl4fsxf7sm6nx4"; depends=[decompr diagonals]; }; gvcm_cat = derive2 { name="gvcm.cat"; version="1.9"; sha256="1kwfcmnl1ivv1lh3zxccwls2xfyx3l8v71ngc0bg6441i81d4xp5"; depends=[MASS Matrix mgcv]; }; gvlma = derive2 { name="gvlma"; version="1.0.0.2"; sha256="0gj52hg665nmlwgbjh9yvz7a3sbzlbj41ksxchnnlxaxipdf6sl8"; depends=[]; }; + gwdegree = derive2 { name="gwdegree"; version="0.1.1"; sha256="0p06hjp7vay83kbpqsgfr1d8z3ayv483rxbv86fdka94gvi1sjyc"; depends=[dplyr ergm ggplot2 gtools magrittr network scales shiny shinydashboard sna tidyr]; }; gwerAM = derive2 { name="gwerAM"; version="1.0"; sha256="1c3rzd1jf52a4dn63hh43m9s9xnjvqn67amlm9z1ndrnn6fwfg1b"; depends=[MASS Matrix]; }; + gwfa = derive2 { name="gwfa"; version="0.0.4"; sha256="0jz82d9lfyd07z0jjlfqzsg7a3vnyz0s1j0rrb5sg9pnvcfjk9qy"; depends=[Rcpp sp]; }; gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; + gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; - h2o = derive2 { name="h2o"; version="3.8.1.3"; sha256="1cp2h7n3na4cwysw8di7lig0gbldji2s7f1r7d8a8a11wikvz6zy"; depends=[jsonlite RCurl statmod]; }; - h5 = derive2 { name="h5"; version="0.9.5"; sha256="1awp1pwfcdss3gd8jxps2ki4j0a2m8y5703jm1dfycgp5blkwqz4"; depends=[Rcpp]; }; + h2o = derive2 { name="h2o"; version="3.10.3.6"; sha256="1jpliv63dpqmq635gxjar19z70ciyw76yxvcg505rgryk2nf3m1h"; depends=[jsonlite RCurl]; }; + h5 = derive2 { name="h5"; version="0.9.8"; sha256="1i7ymbqcmv8b9v8jdaqs49638m7xib5k92d62jh6h4il8l10rykx"; depends=[Rcpp]; }; + hBayesDM = derive2 { name="hBayesDM"; version="0.3.0"; sha256="0ka7x55x04656cad9gyzfr2p0xf9gjyq56vw0ja9561vvbk2dynm"; depends=[BH ggplot2 loo mail modeest Rcpp RcppEigen rstan rstantools StanHeaders]; }; hSDM = derive2 { name="hSDM"; version="1.4"; sha256="1jq6hdnyv446ng62srip0b48kccf0qw3xqym3fprg74mjdy3inqr"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; - hail = derive2 { name="hail"; version="0.1.0"; sha256="1i76hjfiad0l8vpjslnglp1irdzs419ad7q6clnbs3gganbszipy"; depends=[]; }; - hamlet = derive2 { name="hamlet"; version="0.9.4-2"; sha256="01zy6afiy7n28bbx5cwdy6hs82l1rakbwx2gn04kk6famqgmklwp"; depends=[]; }; + hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; + hamlet = derive2 { name="hamlet"; version="0.9.5"; sha256="1wnklaf46fpii10md3sp2cv7qqvrha2ihhrr1kxvpm7m8xzjfqc7"; depends=[]; }; + hansard = derive2 { name="hansard"; version="0.3.4"; sha256="01z2v0lqm35p74hm9x874xgaqdmqa7pig3l4ah5id148s2f5bafd"; depends=[httr jsonlite plyr]; }; hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; haplo_ccs = derive2 { name="haplo.ccs"; version="1.3.1"; sha256="0cs90zxxbvglz1af0lh37dw1gxa04k0kawzxamz2was3dbh19lbz"; depends=[haplo_stats survival]; }; - haplo_stats = derive2 { name="haplo.stats"; version="1.7.6"; sha256="16ll5a8w85yjqy9as5hyg59sbhwmfcf9wcnjl7v7s3qf9zz86211"; depends=[rms]; }; + haplo_stats = derive2 { name="haplo.stats"; version="1.7.7"; sha256="1rag22sqy8r87w5a1dww5cxknacm6975bpp74vw9zr04ldx4c64k"; depends=[rms]; }; + haploR = derive2 { name="haploR"; version="1.4.2"; sha256="1fiv8ybarna79xyhsbpql4l462g7q9x1mg37m4dgpmzp7xvzwx21"; depends=[httr XML]; }; + haploReconstruct = derive2 { name="haploReconstruct"; version="0.1.2"; sha256="17zdl9c3yy6jdzv1wp0ailbga456pmmybzxh3dldymhj8qf32cx0"; depends=[data_table dbscan foreach gplots igraph matrixStats stringi zoo]; }; + haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; haplotypes = derive2 { name="haplotypes"; version="1.0"; sha256="0pwihfi6g4jrnkha9s9rksq0fc8j04mlrwf0295rmy49y19rg84s"; depends=[network]; }; - harvestr = derive2 { name="harvestr"; version="0.6.0"; sha256="1jg4d98bwx2cm3hliayqrazq43sa9kd9ynpaid6x4ld3mz5y8mlq"; depends=[digest plyr]; }; + harrietr = derive2 { name="harrietr"; version="0.2.2"; sha256="1h6i9ls33h0dgncq6i33ig04yq7i1wy1cl1xx2nvbp78ig02klng"; depends=[ape dplyr ggplot2 ggtree lazyeval magrittr tidyr]; }; + harvestr = derive2 { name="harvestr"; version="0.7.1"; sha256="0xgxzbfbc33asfm8sl2y60ki6bwgd6vdh9nz466crkx7m9lsvll8"; depends=[digest foreach plyr]; }; hash = derive2 { name="hash"; version="2.2.6"; sha256="0mkx59bmni3b283znvbndnkbar85fzavzdfgmwrhskidsqcz34yz"; depends=[]; }; hashFunction = derive2 { name="hashFunction"; version="1.0"; sha256="1v57xj8xwv6xhxvgp0zxgvs5vcjw8z5k2ciwbn0jxf4ilyd66cgj"; depends=[]; }; hashids = derive2 { name="hashids"; version="0.9.0"; sha256="0233qly4rb1g4znxm9h9h8gskzrjyav6nd26xkdl7990m5hcbcwh"; depends=[]; }; + hashmap = derive2 { name="hashmap"; version="0.1.0"; sha256="1pp62py2n8ajv90fmv4zkga3hshk9cj1qfzagnp8jnfym0jp9rlc"; depends=[BH Rcpp]; }; hashr = derive2 { name="hashr"; version="0.1.0"; sha256="1ri2zz2l1rrc1qmpqamzw21d9y06c7yb3wr60izw81l8z4mmyc3a"; depends=[]; }; - hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.1"; sha256="1szj5pi9i5ijqakxx4vwvwpz7y76jbgcgm76vfg4cnxvndf7sf4l"; depends=[Rgraphviz]; }; - haven = derive2 { name="haven"; version="0.2.0"; sha256="1ww55ciibq62bix3pdwabpycxv1dh01zsrf0vb6jxxh1idxbm5hg"; depends=[BH Rcpp]; }; + hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.2"; sha256="0rh5kl9ivv9ckv5j5fqwdcflbfzkjicmqrddgxnzbv1iwyph4c0w"; depends=[graph Rgraphviz]; }; + haven = derive2 { name="haven"; version="1.0.0"; sha256="15ynk1qm4g9m6ng4lc1x3hwjb2xak6b795ifh5q1k4mmx07xz6dl"; depends=[BH hms Rcpp readr tibble]; }; hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; }; hazus = derive2 { name="hazus"; version="0.1"; sha256="1c0ahjdy9di1683nk5k4rmr6rhb66523ny039nyv842rgqdy625j"; depends=[reshape2]; }; hbim = derive2 { name="hbim"; version="1.0.3"; sha256="1480nydsi2xj7zbfk4zw24mhsjadf83d827kpqzbmn0yh6srp3ps"; depends=[mvtnorm]; }; @@ -4668,79 +5827,97 @@ in with self; { hcci = derive2 { name="hcci"; version="1.0.0"; sha256="11piy1ajg3j3dbh66szzf7lhc3x28fz75ai39vlx0gl5nc2v5zs5"; depends=[]; }; hcp = derive2 { name="hcp"; version="0.1"; sha256="0hhcy70g13kclxv733kgiys7qn5bi28abpkli5n2vj0a58ac333m"; depends=[]; }; hda = derive2 { name="hda"; version="0.2-14"; sha256="0azfxyws7yslcqplfddmdp5ngk91j5h7llvrg77yh5z0kkd09j1b"; depends=[e1071]; }; - hddplot = derive2 { name="hddplot"; version="0.56"; sha256="0s9iijwq8zfvavqq2bkqm2884sg0957ppkggsv6mmm3cbdi2xrlc"; depends=[MASS multtest]; }; - hddtools = derive2 { name="hddtools"; version="0.2.4"; sha256="001cm07jvbxzsp64mkjymnsncyrd6r1nxwhjqkk2mb5ldz0541ir"; depends=[raster RCurl rgdal sp XML zoo]; }; + hddplot = derive2 { name="hddplot"; version="0.57-2"; sha256="1mckgd99wvxbqvpyx231r97kysppnn1xggy8jvnc31sxq8m9gfr7"; depends=[MASS multtest]; }; + hddtools = derive2 { name="hddtools"; version="0.5"; sha256="1cihc3kn8nvcj0z314b7md02xb108xkrnz1j4svr6hcxwxvv97c5"; depends=[gdata Hmisc raster RCurl rgdal rnrfa sp stringr XML zoo]; }; hdeco = derive2 { name="hdeco"; version="0.4.1"; sha256="04nggwckvn1kwi238qd33l4pryzn4aq5bmi30bvfi99gwnrlgfgq"; depends=[]; }; hdi = derive2 { name="hdi"; version="0.1-6"; sha256="1lzy4jcz14j1qi6z4j1sq7z3z75n8jygnzlvqjf45vn1sqil17cq"; depends=[glmnet linprog MASS scalreg]; }; - hdlm = derive2 { name="hdlm"; version="1.2"; sha256="0s4lzg3s2k7f7byygb11s7f78l3rkkb0zn03kh3d7h8250wg9fax"; depends=[foreach glmnet iterators MASS]; }; - hdm = derive2 { name="hdm"; version="0.1.0"; sha256="10iy6k9gkqm1lx0clin3a5fb1sjxbgrcfx1y6mzkr7kms1a3amdp"; depends=[checkmate ggplot2 glmnet MASS]; }; - hdnom = derive2 { name="hdnom"; version="3.0"; sha256="1cp5104ck7cb4gsqfqnafza87rfd8zylwns2yz0cv4z1mw1z7p7j"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; }; + hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; + hdm = derive2 { name="hdm"; version="0.2.0"; sha256="01zd3b44c0rnwxwxcmsgj7w0clq4h7wrlzy4yiwvxcifiv8mgp8l"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; + hdnom = derive2 { name="hdnom"; version="4.6"; sha256="0hp8sd4xcwcmrs1a7idnhkq7fawvajg35v5mzv2dfa69xdga740h"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; }; + hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; }; + hdr = derive2 { name="hdr"; version="0.1"; sha256="0dgp4442mfvri8vhicp02nrv55z13r6664x2nlcq6vh6xz9pqyl0"; depends=[httr]; }; hdrcde = derive2 { name="hdrcde"; version="3.1"; sha256="027nxpzk1g0yx8rns7npdz30afs5hwpdqjiamc7yjrsi0rzm71lw"; depends=[ash KernSmooth ks locfit mvtnorm]; }; + hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; + healthcareai = derive2 { name="healthcareai"; version="0.1.11"; sha256="05vh4ny7nb3fzfvs46hff4d2ay6q44bzgwx3s81dvdvkha2bmq4q"; depends=[caret data_table doParallel e1071 grpreg lme4 lubridate pROC R6 ranger ROCR RODBC]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; }; heatmap3 = derive2 { name="heatmap3"; version="1.1.1"; sha256="14zkij0gr9awzic71k2j7pniamkywfvwrifdk7jbds70zsi30ph5"; depends=[fastcluster]; }; - heatmapFit = derive2 { name="heatmapFit"; version="2.0.2"; sha256="00p39y6x13yxrxfqx6gzmb80fk1hsyi8wa6brx40hj37pyyfis0p"; depends=[]; }; - heavy = derive2 { name="heavy"; version="0.3"; sha256="0vghk0f1h7qvjs2k41vwh0zq54njdh99gz8cpsbp8pk17xsmv3lv"; depends=[]; }; - heemod = derive2 { name="heemod"; version="0.3.0"; sha256="1m90b3mgjfxfnicjxwszhg3zl496sq12wzldarj2ah8pjhkx7xlz"; depends=[diagram dplyr DT ggplot2 lazyeval logitnorm memoise mvnfast rgho tidyr]; }; + heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; + heatmaply = derive2 { name="heatmaply"; version="0.7.0"; sha256="1s4qcwmv6la6p3vcxp67nvlbbkd92zj1jagj8vwgk46pykqwr1h5"; depends=[colorspace dendextend GGally ggplot2 magrittr plotly reshape2 scales seriation viridis]; }; + heavy = derive2 { name="heavy"; version="0.38"; sha256="0swrn7vvs682k8yhvi49sfs1zpivhjlh7kfcjnk14i2jp1yk2slz"; depends=[]; }; + heemod = derive2 { name="heemod"; version="0.8.0"; sha256="0wzwqb2rj578zlr3nfwmcw3m3dx9rv5v8wlqyn4x2504d3i7g4yv"; depends=[dplyr ggplot2 lazyeval memoise mvnfast pryr rgho tibble tidyr]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; - helsinki = derive2 { name="helsinki"; version="0.9.27"; sha256="1vhzlxjkk2hgzjlin9ksvjk3bi2ly5nm4361777m49lb84ncs7dr"; depends=[maptools RCurl rjson sp]; }; - heplots = derive2 { name="heplots"; version="1.0-16"; sha256="00aj3x864zlzyj52yya7wajjnpwmpgicqvgyx71gnxdkqmv64x40"; depends=[car MASS]; }; - hergm = derive2 { name="hergm"; version="2.2-2"; sha256="0jshhf57kybrayk94vv7p1sjvhlfcdya6jllaj9kgn46kkvci54p"; depends=[ergm latentnet network sna]; }; - heritability = derive2 { name="heritability"; version="1.1"; sha256="05vcprf3rk65197njnhw7n5l19hvy7hfp4fdigkwzvch4rnicidf"; depends=[MASS]; }; + helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; + heplots = derive2 { name="heplots"; version="1.3-3"; sha256="0j644a0r4ycfg57p9ymlb3jb9bd797vwlw1ps24injsz71wbhnh0"; depends=[car MASS]; }; + hergm = derive2 { name="hergm"; version="3.1-0"; sha256="17mxn2ff7yzj95vjsppvz7c9a5g6a2z9zyf34xvvxp9031zhrf46"; depends=[ergm latentnet mcgibbsit network sna]; }; + heritability = derive2 { name="heritability"; version="1.2"; sha256="18snrfsjj5jw5qicj92d5qch9v4ciqw1hbiwg6q8kfjka9nmqpma"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.1"; sha256="0ns8l1rf346qxalfdwc7ny0kjp212f6qnnlgillpyvd8k29kg8iy"; depends=[maxLik]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; + hetmeta = derive2 { name="hetmeta"; version="0.1.0"; sha256="023bdjsv0ibisz47vaap9yamzjna4hhndk3haw2g1cm92wnrdra5"; depends=[metafor]; }; hett = derive2 { name="hett"; version="0.3-1"; sha256="1y0hr9g2pjwzc5azh095h33qidxhhmlvd1csamjnhwdphj5drzz0"; depends=[lattice MASS]; }; + heuristica = derive2 { name="heuristica"; version="1.0.1"; sha256="1myivlqw6a8wh97ma9lrpgvaqb0vn4kj8yp9r4z5vc4pxgmm48g6"; depends=[Hmisc]; }; hexView = derive2 { name="hexView"; version="0.3-3"; sha256="0cx5hl70sk1wk24na21vjyv50b2358z1plvvcw604qf1zij4icwn"; depends=[]; }; hexbin = derive2 { name="hexbin"; version="1.27.1"; sha256="0xi6fbf1fvyn2gffr052n3viibqzpr3603sgi4xaminbzja4syjh"; depends=[lattice]; }; + hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; }; hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hgam = derive2 { name="hgam"; version="0.1-2"; sha256="1flcc67n8kbh9m5phdfl587xg1x935zbp305y0gdmkc8vpkiwpcf"; depends=[grplasso lattice rgl]; }; hglasso = derive2 { name="hglasso"; version="1.2"; sha256="1qq41ma33wz7qjs5zx72yvngpsiq62z9sd6d5hvvl83brq0fcr4b"; depends=[fields glasso igraph mvtnorm]; }; hglm = derive2 { name="hglm"; version="2.1-1"; sha256="1vr1332db60fqbck0nplfw5dnxpb7sa3irh80k2hyx4aw74ckr2k"; depends=[hglm_data MASS Matrix]; }; hglm_data = derive2 { name="hglm.data"; version="1.0-0"; sha256="1hrq1jac658z5xjsg03nfkb4kwm9z44bhciv5chk74ww8gjr9j9q"; depends=[MASS Matrix]; }; - hgm = derive2 { name="hgm"; version="1.11"; sha256="1p6391bcvsgf2mvkdrwc3fj3h6hkzshqmzb6f31kmpiihjwv3392"; depends=[deSolve]; }; - hht = derive2 { name="hht"; version="2.1.2"; sha256="10lpndwpddcqxyrk9pq9dwaqpj4apxdic971nd68cn3pql6fssdn"; depends=[EMD fields spatstat]; }; + hgm = derive2 { name="hgm"; version="1.16"; sha256="1jgci5fg5fk867qvjgdlqr20spymjqxrypyp58jkfkjjrx1jpjsa"; depends=[deSolve]; }; + hht = derive2 { name="hht"; version="2.1.3"; sha256="022a8zz2m34q89h29jglfj21knlqd8dwi85qmsi78ly1vacnzap8"; depends=[EMD fields spatstat]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; hier_part = derive2 { name="hier.part"; version="1.0-4"; sha256="03acdgzkhbk4p0wxw2g1hzklmq9hzmdkkvfj742vzfswdd803yg9"; depends=[gtools]; }; hierDiversity = derive2 { name="hierDiversity"; version="0.1"; sha256="1n4jg003h9hvr2n43jwxgfpazvc5ij5lqvspxi49w8fpzpcrqrjj"; depends=[]; }; hierNet = derive2 { name="hierNet"; version="1.6"; sha256="08lifk92caa4l9nfb89rl6vby8sd1ba3ay7z29ffirsg7cx07qiw"; depends=[]; }; hierarchicalDS = derive2 { name="hierarchicalDS"; version="2.9"; sha256="0ckxy4pww5iik4m4kqs714f00g7lfzsarjdbpd0bcalvq4lmaal2"; depends=[coda ggplot2 Matrix mc2d mvtnorm rgeos truncnorm xtable]; }; + hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; }; hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; }; + hierformR = derive2 { name="hierformR"; version="0.1.0"; sha256="0ym6i5ajp55mmk085slmma3g5xqgdk0d0gba28fdg3csxsxl9w1r"; depends=[igraph]; }; hierfstat = derive2 { name="hierfstat"; version="0.04-22"; sha256="1fav2v2996v5kb1ffa6v5wxfm921syxg6as034vd3j4jfhdibyfx"; depends=[ade4 adegenet gtools]; }; hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; }; highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; }; + highSCREEN = derive2 { name="highSCREEN"; version="0.1"; sha256="0g2pcxdg5fix63jqpddqnldalg95x7ghvmbfr1ijjwi9m3ki2bby"; depends=[gplots]; }; highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; - highcharter = derive2 { name="highcharter"; version="0.2.0"; sha256="114ds4lxqgxcv1lhbk01brk9mzs7jc6c0lmcr9pl1kwff5qj9zgz"; depends=[assertthat dplyr htmlwidgets magrittr purrr quantmod rlist stringr tidyr viridisLite xts zoo]; }; - highfrequency = derive2 { name="highfrequency"; version="0.4"; sha256="0kzadnkvmxcrb8flsxlx8vd9c2yad7hh1pij05dhdcpaidrc9acq"; depends=[xts zoo]; }; + highcharter = derive2 { name="highcharter"; version="0.5.0"; sha256="1myypff80mxcgc3j0sflalhqz344c2zz2p90aarli1pbys9v8ynp"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlist stringr tibble tidyr xts zoo]; }; + highfrequency = derive2 { name="highfrequency"; version="0.5"; sha256="1csyfvhll1pvqaw5g6iqm55raxlcflc2wf86g0m1gv3x5iw7qjsv"; depends=[BMS chron cubature FKF MASS mvtnorm numDeriv quantmod robustbase rugarch sandwich timeDate xts zoo]; }; highlight = derive2 { name="highlight"; version="0.4.7"; sha256="1gpwj4phq45hhx4x6r8rf6wc6ak6y4fkbad9v23fl8wldb4a8dyg"; depends=[]; }; - highmean = derive2 { name="highmean"; version="2.0"; sha256="126kh0bql0yjakacm0wxxjrfz0x8x9hlyb9j0mrjb4dnggji21j3"; depends=[MASS mnormt mvtnorm]; }; - highr = derive2 { name="highr"; version="0.5.1"; sha256="11hyawzhaw3ph5y5xphi7alx6df1d0i6wh0a2n5m4sxxhdrzswnb"; depends=[]; }; + highlightHTML = derive2 { name="highlightHTML"; version="0.1.1"; sha256="0kjs01ml4v57956rk3ch8y8kxni36gymkf830skxh4fj4nsr8hs1"; depends=[]; }; + highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; + highr = derive2 { name="highr"; version="0.6"; sha256="0n9v44dxdy5fhkdmpbpa2p78whyd9z3rhhy42ipdz5m5vsr55qa3"; depends=[]; }; highriskzone = derive2 { name="highriskzone"; version="1.3-1"; sha256="1jw2kf9i81h1chgbdhzw1hh3aq2hfiay58jkyzn4rdwmw21jkgs5"; depends=[deldir fields ks Matrix rgeos spatstat]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; hisemi = derive2 { name="hisemi"; version="1.0-319"; sha256="0pm7dsaaqrdhkvxsk2cjvk6qd2rqqmddmv012smnrivi7mpnvd4w"; depends=[fda Iso Matrix]; }; - hisse = derive2 { name="hisse"; version="1.5"; sha256="14vyzc3dg5bdq17762kl1dqlh20ldnzv27ml0i9s5hrgk5235v44"; depends=[ape data_table deSolve GenSA phytools subplex]; }; - histmdl = derive2 { name="histmdl"; version="0.5-1"; sha256="085m6g7ykg3n89pwvagdjhpgcxy68wdq7jmmc2aja1qigq9kjhri"; depends=[]; }; - histogram = derive2 { name="histogram"; version="0.0-23"; sha256="0hrhk423wdybqbvgsjn7dxgb95bkvmbh573q1696634hvzfdm68c"; depends=[]; }; + hisse = derive2 { name="hisse"; version="1.8.1"; sha256="0vdl61ylnv4f77hrpv68xf2ssjczynpmyla4pgsxhyp1r65l6in8"; depends=[ape data_table deSolve GenSA nloptr phytools subplex]; }; + histmdl = derive2 { name="histmdl"; version="0.6-1"; sha256="0vgfy49hrjcm3f8l2hb0fbn1ydh94g4xq2s116yf2c9pd0pwsbi1"; depends=[]; }; + histogram = derive2 { name="histogram"; version="0.0-24"; sha256="1jihw92zi5a4dj6lzm1qvkynv9fp6j5iy83g8rzikp276x63nb62"; depends=[]; }; historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; }; - hit = derive2 { name="hit"; version="0.2-1"; sha256="17dry6ha261z9a2v6iwfsij8wgivhfg991pfkjwv6ysjfiwy8wds"; depends=[glmnet Rcpp speedglm]; }; - hitandrun = derive2 { name="hitandrun"; version="0.5-2"; sha256="0451rdnp3b4fcdv4wwdxv3wplkxqmidxh4v5n1jjxinnzvl5dv9a"; depends=[rcdd]; }; + hit = derive2 { name="hit"; version="0.4.0"; sha256="1vyla7jlg61rlrmqjb1wya404xj90xys175h12qy30paxsl5icqz"; depends=[glmnet Rcpp speedglm]; }; + hitandrun = derive2 { name="hitandrun"; version="0.5-3"; sha256="0cmn8rzgksnygqwa5pngbdc6pds3kxx4y7mq3mg3xk1vys9b6r4n"; depends=[rcdd]; }; hive = derive2 { name="hive"; version="0.2-0"; sha256="0ywakjphy67c4hwbh6prs4pgq5ifd8x8inxjkigjiqz6jx3z852v"; depends=[rJava XML]; }; + hkclustering = derive2 { name="hkclustering"; version="1.0"; sha256="1xzzrvm847n1k2q2sg5dir5wgnix76arq4my211y8l0n1d5b2q38"; depends=[cluster]; }; + hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; }; + hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; }; hmeasure = derive2 { name="hmeasure"; version="1.0"; sha256="0wr0xq956glmhvy4yis3qq7cfqv9x82ci9fzx3wjvaykd16h0sx9"; depends=[]; }; - hmm_discnp = derive2 { name="hmm.discnp"; version="0.2-3"; sha256="1r9xxgsqh5pw9incldaxnsqhyanhd4jwm6w0ix1k43i53dw4diyr"; depends=[]; }; + hmm_discnp = derive2 { name="hmm.discnp"; version="0.2-4"; sha256="096flx2b9s66dasqj05zrkxsmg3lj6j5w0pwrw3b1qkpp9dvlrkb"; depends=[]; }; hmmm = derive2 { name="hmmm"; version="1.0-3"; sha256="0yjx5i13jbv7vzxn84m6305124ri7jnym0bxbdj46s6l7lw025a9"; depends=[MASS mvtnorm quadprog]; }; - hnp = derive2 { name="hnp"; version="1.2"; sha256="1qpvdhyp62mrr5cldpnh0qlfjfkilpzqdzqq9r9rjnm4q7241r7q"; depends=[MASS]; }; + hms = derive2 { name="hms"; version="0.3"; sha256="127znf522r5mn3k6frhdd7pqh063bs3l85gn9h7cx50hpjf2as4k"; depends=[]; }; + hnp = derive2 { name="hnp"; version="1.2-2"; sha256="0wcr472a6iq3zwzddqpjv649rx9c5ssrlj0qhbv4pn4sjfjv0pfx"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4"; sha256="15klcpmja4afwmpfxrxgrfis0vj7fil8k15jc3p0lqz3dhvq0dvf"; depends=[statmod survival]; }; - hoardeR = derive2 { name="hoardeR"; version="0.1"; sha256="1a3kf676mchrla9g0b619dx09ihxvlmahgwlbwqny6zwr49w7vzl"; depends=[httr MASS R_utils stringr XML]; }; + hoardeR = derive2 { name="hoardeR"; version="0.9.2"; sha256="0sss3ki2w0aqyp084pprycw8d8vgm60z41iq6g9nxhqhr9xy5kdw"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools httr IRanges MASS R_utils RCurl Rsamtools seqinr stringr XML]; }; holdem = derive2 { name="holdem"; version="1.1"; sha256="07h4cbg7hx91hc6ypi6hbalzdd9qz9rfhjgk5sq1srnangwwnxlw"; depends=[]; }; homals = derive2 { name="homals"; version="1.0-6"; sha256="1xfpb6mxfk18ad2fggljr2g01gy4c290axc3vgwngmmimmcvh4cy"; depends=[ape rgl scatterplot3d]; }; - homeR = derive2 { name="homeR"; version="0.1"; sha256="0yq93b3wkgbnwzpyhx9c73sb9xgz7m3z4p5rflk3lmc0p53h81g5"; depends=[]; }; + homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; }; homomorpheR = derive2 { name="homomorpheR"; version="0.1-1"; sha256="0bisbaglv6l8nzcvl9arly9ns2hwyjj6bwplaf6ynyac7fgmmd6j"; depends=[gmp R6 sodium]; }; homtest = derive2 { name="homtest"; version="1.0-5"; sha256="1lnqlg3dwq174ic6dbjllysw5fjy5kvvgbl6gvabjmcs66z27fp0"; depends=[]; }; - hopbyhop = derive2 { name="hopbyhop"; version="1.0"; sha256="1nr4g9nz9lkkxi4glyi1ka0k4pz9vapv0k10k1ngqm0cqy64xsgn"; depends=[]; }; + hopbyhop = derive2 { name="hopbyhop"; version="2.1"; sha256="0j4m1zz0ijf1kw2m12g7bww3418b8pyjvvrzkm8xcryjil2xfmim"; depends=[]; }; + horizon = derive2 { name="horizon"; version="1.0"; sha256="1wrp5qr1qql21xwcjh415q67z2ym4790zfp0n81360v6bp2b3hyy"; depends=[raster]; }; hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; + horseshoe = derive2 { name="horseshoe"; version="0.1.0"; sha256="19khsr7gfcygqasjswvm0v0ddna1i1grfbhars8jlvybfawswhgx"; depends=[]; }; hot_deck = derive2 { name="hot.deck"; version="1.1"; sha256="13pfgcyqaf5ik3pi8vgm06xmqli4hgslzlmhy1zi951anzdr49bd"; depends=[mice]; }; hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; hotspots = derive2 { name="hotspots"; version="1.0.2"; sha256="1cwcwin86y7afjhs8jwlz1m63hh70dcjag0msds4ngksvjh9gj2q"; depends=[ineq lattice]; }; @@ -4749,64 +5926,79 @@ in with self; { hpcwld = derive2 { name="hpcwld"; version="0.5"; sha256="17k4mw41gygwgvh7h78m0jgzh1bivrvrsr8lgxxw3sbkw88lwb40"; depends=[multicool partitions]; }; hpoPlot = derive2 { name="hpoPlot"; version="2.4"; sha256="176bf93gjwbi2z7nz81w4aycwax6f7jxvs3236zrmf0f0f4m7bkc"; depends=[functional magrittr Rgraphviz]; }; hqmisc = derive2 { name="hqmisc"; version="0.1-1"; sha256="0jcy2hb3dmzf9j4n92aq7247mx9w7n30wpsx0dkchqnjwlqwwncw"; depends=[]; }; - hqreg = derive2 { name="hqreg"; version="1.2"; sha256="1rcna9brzyzxhg50f5g1pjhyd9c8s2pvzajzavh9f81lyfjfzpyd"; depends=[]; }; + hqreg = derive2 { name="hqreg"; version="1.4"; sha256="1j6zp3rmpjx409vm7kq159mlawg87wsq0ypdkan34yxxv9py2jmi"; depends=[]; }; hrr = derive2 { name="hrr"; version="1.1.1"; sha256="17jzsgh2784y7jdwpa50v7qz99dw6k2n25sisnam6h1a39b96byn"; depends=[]; }; - hsdar = derive2 { name="hsdar"; version="0.4.1"; sha256="10x8488alik3yy09v0slr9lrgymxwnd9w9q7zyxx7ir1p0ijgjgr"; depends=[caret raster rgdal rootSolve signal]; }; + hsdar = derive2 { name="hsdar"; version="0.5.1"; sha256="0n5d05f7bh9zsjipfzf07yx71ccqdkarmmm4a1ryah7sjlg0zpil"; depends=[caret raster rgdal rootSolve signal]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; + hsm = derive2 { name="hsm"; version="0.1"; sha256="1dacsq2f23bz94rh4s3477hs38pbrpz2lis4s1l9im894bcbny1x"; depends=[]; }; hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.1"; sha256="1z7yxbknldxn780dxw9xz984b3i8pj5hmdnbynvxc5k0ss8g7isy"; depends=[Rcpp RcppArmadillo snowfall]; }; - htmlTable = derive2 { name="htmlTable"; version="1.5"; sha256="1pjmxh3w0iarfzm9krhdqc1931mvcfq4262rmdmpfmq0r1is7qgi"; depends=[knitr magrittr stringr]; }; - htmltab = derive2 { name="htmltab"; version="0.6.0"; sha256="00171fsdgv3rks6j4i5w8rbk2kar2rbmqqpqrr2xdxkjqxsf6k4b"; depends=[httr XML]; }; + htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; + htmlTable = derive2 { name="htmlTable"; version="1.9"; sha256="0ciic1f4iczq14j81fg7kxibn65sy8z1zxkvk1yxnxxg6dzplj2v"; depends=[checkmate htmlwidgets knitr magrittr stringr]; }; + htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; }; + htmltidy = derive2 { name="htmltidy"; version="0.3.1"; sha256="004a2wwsnx3mnm6v1mjlaq08gcgm60xahh520vfyrsp56b7j29ky"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; htmltools = derive2 { name="htmltools"; version="0.3.5"; sha256="0j9bf80grd6gwh7116m575pycv87c0wcwkxsz3gzzfs4aw3pxyr9"; depends=[digest Rcpp]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="0.6"; sha256="1sljs7zajzj1lsrrvqv7anpma4plzs79mqwmw7b2c5d7mn9py8lw"; depends=[htmltools jsonlite yaml]; }; - hts = derive2 { name="hts"; version="4.5"; sha256="1bjribmfczkx139z73b0cl3lzlw5n2byyyc5inqv9qgayz0dc6cp"; depends=[forecast Matrix Rcpp RcppEigen SparseM]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="0.8"; sha256="1df3pwl34rvdbr9sgr5h27q9bmqpckvpwq4frl3d1v614y3vfclj"; depends=[htmltools jsonlite yaml]; }; + hts = derive2 { name="hts"; version="5.0"; sha256="130kyc4ygym53gsr8r8n35wrhx2yb3slf1yjs9cdyrqzxwsggfp4"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; httk = derive2 { name="httk"; version="1.4"; sha256="1abjb1vg8q4va8g2bfsv537fwrsga83amc9rfsxbdbhzhf2qn0qr"; depends=[deSolve msm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; - httpcache = derive2 { name="httpcache"; version="0.1.2"; sha256="1xphdicgw3zli6naprvn09vh8a0jpsg3nhlwhpwji00p222rnjc4"; depends=[digest httr]; }; - httpcode = derive2 { name="httpcode"; version="0.1.0"; sha256="08x3jnvra833kp625bys04b5np9rrlhqf5gp127df80c289vabwx"; depends=[]; }; + httpcache = derive2 { name="httpcache"; version="1.0.0"; sha256="0p0c2n1n5nrmnii9myp9blzwg996xgm15law9f073an4xvfg2kd2"; depends=[digest httr jsonlite]; }; + httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; }; httping = derive2 { name="httping"; version="0.1.0"; sha256="1bhy5mh0hz83rjmvh7wl211nqkz58gxsgkwlkmjrdfzc2cparxjz"; depends=[httpcode httr jsonlite magrittr pryr]; }; + httptest = derive2 { name="httptest"; version="1.1.0"; sha256="0fdsksxdq9y44460zpip0c3fhmlzvjbj9fp11g27k4lh85p042fa"; depends=[digest httr jsonlite testthat]; }; httpuv = derive2 { name="httpuv"; version="1.3.3"; sha256="0aibs0hf38n8f6xxx4g2i2lzd6l5h92m5pscx2z834sdvhnladxv"; depends=[Rcpp]; }; - httr = derive2 { name="httr"; version="1.1.0"; sha256="08sq34pknsfcy8lm06nydi12mbaxpqpgb025ahr33v9d3g0wvh6p"; depends=[curl jsonlite mime openssl R6]; }; + httr = derive2 { name="httr"; version="1.2.1"; sha256="03kkjlhyvvi5znwaxfm6cmdsg3q7ivwsvkzgabhjdj2jxs80pfg7"; depends=[curl jsonlite mime openssl R6]; }; huge = derive2 { name="huge"; version="1.2.7"; sha256="134d951x42vy9dcmf155fbvik2934nh6qm2w5jlx3x2c6cf7faq4"; depends=[igraph lattice MASS Matrix]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; - humaniformat = derive2 { name="humaniformat"; version="0.5.0"; sha256="18094zlvhd44vg2rg4731f84imrjp69gzay3gnm5yp1scbiqbd82"; depends=[Rcpp]; }; - humarray = derive2 { name="humarray"; version="1.0.0"; sha256="1zza4q8cwcvpy1fgw89zchq7hccdy56phyab2f8x8vsph0gr7kc9"; depends=[BiocGenerics BiocInstaller biomaRt GenomeInfoDb GenomicFeatures GenomicRanges genoset IRanges NCmisc Rcpp reader rtracklayer S4Vectors]; }; - hunspell = derive2 { name="hunspell"; version="1.2"; sha256="0yibb9ic9kkl2h0vwwim0qanhsm0c6xck48i3r158agrqzc49s5x"; depends=[Rcpp]; }; + humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; + humarray = derive2 { name="humarray"; version="1.1"; sha256="1rzx53620nkicnkc41p6pzsiny8kfpw6n3y0mwvckz6ba6iyfl4w"; depends=[BiocGenerics BiocInstaller biomaRt GenomeInfoDb GenomicFeatures GenomicRanges genoset IRanges NCmisc Rcpp reader rtracklayer S4Vectors]; }; + humidity = derive2 { name="humidity"; version="0.1.1"; sha256="0ifxjz7216ld5c4kc9vs83fcijbg5i2z0mwfzszch9j1s734yc8y"; depends=[]; }; + hunspell = derive2 { name="hunspell"; version="2.3"; sha256="1sgjsa9gfq12bf2ld3yqwa18cy8njhvjd1jihbrbzki8z4xl7pjj"; depends=[digest Rcpp]; }; + hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.0.1"; sha256="1j6srqnmdhmg1yg06nqxapdrd9p3yrfs01z0sk43dvjq4dmwmrjr"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate maps purrr RColorBrewer stringr tidyr]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; hwriterPlus = derive2 { name="hwriterPlus"; version="1.0-3"; sha256="1sk95qgpyxwk1cfkkp91qvn1iklad9glrnljdpidj20lnmpwyikx"; depends=[hwriter TeachingDemos]; }; hwwntest = derive2 { name="hwwntest"; version="1.3"; sha256="1b5wfbiwc542vlmn0l2aka75ss1673z8bcszfrlibg9wwqjxlwk5"; depends=[polynom wavethresh]; }; hybridEnsemble = derive2 { name="hybridEnsemble"; version="1.0.0"; sha256="08y11cmlhnl456wxsvh3ll1f9ywkmgqjwlwr3v3qhm54nlanwvkr"; depends=[ada AUC e1071 FNN genalg GenSA glmnet kernelFactory NMOF nnet nnls pso quadprog randomForest reportr Rmalschains ROCR rotationForest rpart soma tabuSearch]; }; hybridHclust = derive2 { name="hybridHclust"; version="1.0-5"; sha256="0w06vna66hlmvx10dl1l0nzbnxkd634gxjz26w015f83vpmfc5vz"; depends=[cluster]; }; + hybridModels = derive2 { name="hybridModels"; version="0.2.9"; sha256="1y8793wqd22w042pgz8fnd83pl2jcr6afr6ss600qhphm5h6cig5"; depends=[doParallel foreach ggplot2 GillespieSSA reshape2 stringr]; }; hydroApps = derive2 { name="hydroApps"; version="0.1-1"; sha256="1ycv7l2ywwnx2mgklg6rry7n24jyhi4spvp1xl345yvyn9kf15dz"; depends=[nsRFA]; }; hydroGOF = derive2 { name="hydroGOF"; version="0.3-8"; sha256="1ljk2dk5ydsg7qdizyzkbw0b2zdhnb3x9h965d94ygzg8nw5kbak"; depends=[hydroTSM xts zoo]; }; hydroPSO = derive2 { name="hydroPSO"; version="0.3-4"; sha256="12md94g78m7m1np36sadx0wxpb149pn5gd8yj2kw7fphb8g6a218"; depends=[Hmisc lattice lhs sp zoo]; }; hydroTSM = derive2 { name="hydroTSM"; version="0.4-2-1"; sha256="0z5xw25w2fn67x2dw61msfdnp2dr2s2yi525fcjxn77339x9ksfr"; depends=[automap e1071 gstat sp xts zoo]; }; - hydrogeo = derive2 { name="hydrogeo"; version="0.2-3"; sha256="1kvzpdjrzbxy4rbfhjqmxdipaamd2rjdyxjv6vfxv1ixs1bm8cwm"; depends=[]; }; - hydrostats = derive2 { name="hydrostats"; version="0.2.4"; sha256="16h9gchfrppn5n77bld8b5lhwk45dncfwxxibrmb6m6iclqiadgy"; depends=[]; }; + hydrogeo = derive2 { name="hydrogeo"; version="0.5-1"; sha256="05766n82r6cvk4gnpnfrq28248awzm3y06dnybaymydjh6n1dn73"; depends=[]; }; + hydrostats = derive2 { name="hydrostats"; version="0.2.5"; sha256="1n0wy8i1cfsgmqh898qi0qnqn4qx1srjvd05vmsf9qmhpnnyqw5m"; depends=[]; }; hyfo = derive2 { name="hyfo"; version="1.3.6"; sha256="0d8dhp15h3ajvivb6fq8q83l7nz25a2lc7zx9cwlq6vrkj8ww3ya"; depends=[ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; - hyperSpec = derive2 { name="hyperSpec"; version="0.98-20150304"; sha256="0fjww2h6vlm53dsnaxb3i11cmary1w8l0jr9c5dy16y7n9cc3hqb"; depends=[ggplot2 lattice latticeExtra mvtnorm svUnit]; }; + hyper_fit = derive2 { name="hyper.fit"; version="1.0.3"; sha256="17f5i2i960796hl92y7ci9ffspway435r02kw1zk91lvfn927hng"; depends=[LaplacesDemon magicaxis MASS rgl]; }; + hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.2"; sha256="1jlcfwyqs2mfdixqik5dqb0sl3i9pjxcrwabbcr24z8wnq524zx8"; depends=[doParallel foreach iterators randomForest unbalanced]; }; + hyperSpec = derive2 { name="hyperSpec"; version="0.98-20161118"; sha256="0343prdah83l45z6p2wafmipw2x3f0yshm5hm11wgkkm1cnv5905"; depends=[ggplot2 lattice latticeExtra svUnit]; }; hyperdirichlet = derive2 { name="hyperdirichlet"; version="1.4-9"; sha256="03c2xgfhfbpn1za84ajhvm0i5cpmfnz1makidrr2222addgyp9zx"; depends=[abind aylmer cubature mvtnorm]; }; - hypergea = derive2 { name="hypergea"; version="1.2.3"; sha256="13a8r7f2qq7wi0h7jrg29mn573njzi1rwna0ch9sj8sdy8w26r6w"; depends=[]; }; - hypergeo = derive2 { name="hypergeo"; version="1.2-11"; sha256="0kg7yimgrrcqdzxackslf2zxpdrl3xx3a88irkxlwhf36znwfrdj"; depends=[contfrac deSolve elliptic]; }; + hypergea = derive2 { name="hypergea"; version="1.3.3"; sha256="0spchrbb5y3yx63acs9ns256h7k3nd5wxg8vw258kqlvyapj50l6"; depends=[]; }; + hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; }; hypervolume = derive2 { name="hypervolume"; version="1.4.1"; sha256="0gx9ing4h1sg4zzppfa386hllryf8vk1n013yv14c0k3sjjnz456"; depends=[fastcluster geometry ks MASS Rcpp RcppArmadillo rgl]; }; hyphenatr = derive2 { name="hyphenatr"; version="0.3.0"; sha256="0mv77njy0ha7bj3kw620fk9r8cdzqd0v3ipikihqxq47fr57ml0v"; depends=[Rcpp stringi]; }; + hypoparsr = derive2 { name="hypoparsr"; version="0.1.0"; sha256="1bldiz5j6h9z499wwz8cbg5vshdmxgcd8qfxkz1a45q8b6nsd4vf"; depends=[data_tree readr RecordLinkage tibble]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; + hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; hysteresis = derive2 { name="hysteresis"; version="2.5"; sha256="1b1dd2367pjbg4jnn65l2jcj38ljz7adpdg8f5b9rj1rw7qgikfl"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3"; sha256="0pnkkabzi57czcwd9i15nwv8ggwvyxmvn1wam7yrrrbvmi17lmrm"; depends=[msm Rcpp RcppArmadillo]; }; + iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; iBUGS = derive2 { name="iBUGS"; version="0.1.4"; sha256="0vsxy8pnbix0rg7ksgywx7kypqb5ngkxhldh3cisjkvdv638ybps"; depends=[gWidgetsRGtk2 R2WinBUGS]; }; iC10 = derive2 { name="iC10"; version="1.1.3"; sha256="19dlrwj47zmdgmvzjfs5qa9fqq8g9ywhgy5mqbp99n7d9hg4ybxh"; depends=[iC10TrainingData pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.0.1"; sha256="1x1kgxiib9l7whm2kmbv1s912hgpl7rdpqpn67nlkiswnr27hqn4"; depends=[]; }; iClick = derive2 { name="iClick"; version="1.2"; sha256="04d82wbddvj73cw6ys492nasvxcj8m5594zf9r41y72i5yha11pa"; depends=[fBasics forecast lattice lubridate openair rugarch timeDate timeSeries]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; + iDOS = derive2 { name="iDOS"; version="1.0.0"; sha256="1jj98ikzvfp6qbnh2j6msi0m89sbmjjafgry43rq7qmczzs81hl8"; depends=[VennDiagram]; }; iDynoR = derive2 { name="iDynoR"; version="1.0"; sha256="01702vl10191mbq2wby1m0y6h8i6y6ic4pa83d27cg3yccsrhziz"; depends=[vegan XML]; }; iFad = derive2 { name="iFad"; version="3.0"; sha256="0jrl9bayihp3wb4k5w9kc71qlsdxk7vl83ydfibx2bg79c4hf3cs"; depends=[coda MASS Rlab ROCR]; }; - iGasso = derive2 { name="iGasso"; version="1.3"; sha256="17j29jj767wy5zhgbnznlj0jb4azzrl0qdijc11bpwb7apkmyvz8"; depends=[CompQuadForm lattice]; }; - iLaplace = derive2 { name="iLaplace"; version="1.0.0"; sha256="1fwsfx3y44k8xsp1l1n51vqa767ahvk462plgkljdcq4nxa0idvc"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; - iRafNet = derive2 { name="iRafNet"; version="0.1-1"; sha256="1lcrsii4cmbih67wwvndnbbm023n001qy1phg6k76zsm9sizd7a1"; depends=[]; }; + iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; + iJRF = derive2 { name="iJRF"; version="1.1-4"; sha256="1fgbc0z647vwybffzp4iips86pxakd25dlk5jqgm049s6pa8m73v"; depends=[ggplot2]; }; + iLaplace = derive2 { name="iLaplace"; version="1.1.0"; sha256="1z752yw3nvqj1ckf23262phkw849cb5p4m14v108xf2dizyzggxg"; depends=[doParallel fastGHQuad foreach iterators Rcpp RcppArmadillo]; }; + iNEXT = derive2 { name="iNEXT"; version="2.0.12"; sha256="1041r5k0k3kzik5vwyd62s4yc85lnnxbg5gbbl0kl629kikymb6y"; depends=[ggplot2 reshape2]; }; + iRafNet = derive2 { name="iRafNet"; version="1.1-1"; sha256="0w9bry49apkrrrabglnv5w9l47jakmc30jh8q22a8gazwss293fb"; depends=[ROCR]; }; iRefR = derive2 { name="iRefR"; version="1.13"; sha256="17kjfga62xc4s1kii5clxszbag2dr1dyxfm7jasr20prx28ya6pp"; depends=[graph igraph RBGL]; }; - iRegression = derive2 { name="iRegression"; version="1.2"; sha256="1fn25xnrvgx2ayhss136rxn1h3c9pvq2gmb5kbp92vsf07klvh6v"; depends=[mgcv]; }; + iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.0"; sha256="1knncn47pl411r31z1r5ipsiyagcpjbc2gb972n7l3539pcpf0zy"; depends=[]; }; iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; @@ -4814,36 +6006,49 @@ in with self; { ibdreg = derive2 { name="ibdreg"; version="0.2.5"; sha256="1kaa5q1byi30wzr0mw4w2cv1ssxprzcwf91wrpqwkgcsdy7dkh2g"; depends=[]; }; ibeemd = derive2 { name="ibeemd"; version="1.0.1"; sha256="115z13q02gzixziknix2l53mi12zzg30ra9h35pv6qzrr11ra1ic"; depends=[deldir fields rgeos sp spdep]; }; ibelief = derive2 { name="ibelief"; version="1.2"; sha256="1zh6bpg0gaybslr1p05qd5p2y5kxbgyhgha4j4v5d69d78jwgah9"; depends=[]; }; - ibmdbR = derive2 { name="ibmdbR"; version="1.47.1"; sha256="0xxhx0dbz9y4lhnwb0ic14dny0md59izicn12nbsv8040v56kwky"; depends=[arules ggplot2 MASS Matrix RODBC rpart rpart_plot]; }; + ibm = derive2 { name="ibm"; version="0.1.0"; sha256="0g6wg2qpa4q142xw2vq5pca4ll6pb8hyll5g0c93kk8crddk51s7"; depends=[Rcpp]; }; + ibmcraftr = derive2 { name="ibmcraftr"; version="1.0.0"; sha256="0zm5j0a1wjj5agibp38h73qxpq0njvrhfq3077xhhfizcb3v24sb"; depends=[Rcpp]; }; + ibmdbR = derive2 { name="ibmdbR"; version="1.48.0"; sha256="0kz08p61v12kgv1k1zrgh8mimhvnffy2fgck21gxbsa03sdi144i"; depends=[arules ggplot2 MASS Matrix RODBC rpart rpart_plot]; }; ibr = derive2 { name="ibr"; version="2.0-2"; sha256="1v4jn1izdc0cvm0yhr0anz2zjz66i25rg9039327kw8yrx8a34wx"; depends=[mgcv]; }; ic_infer = derive2 { name="ic.infer"; version="1.1-5"; sha256="0nmx7ijczzvrv1j4321g5g5nawzll8srf302grc39npvv1q17jyz"; depends=[boot kappalab mvtnorm quadprog]; }; ic50 = derive2 { name="ic50"; version="1.4.2"; sha256="1a5ddmbdfr3ls132fvalbkh4yaawv9k58rgpy54s5qddrm6aas2s"; depends=[]; }; icRSF = derive2 { name="icRSF"; version="1.0"; sha256="155lgak9jqsy398q5y4fl050gas5hppb25jhc1njglq2h98w3pl2"; depends=[icensmis Rcpp]; }; ica = derive2 { name="ica"; version="1.0-1"; sha256="1bkl4a72l0k6gm82l3jxnib898z20cw17zg81jj39l9dn65rlmcq"; depends=[]; }; icaOcularCorrection = derive2 { name="icaOcularCorrection"; version="3.0.0"; sha256="1vmvarc2apipd0vlhprc5wpgh8i38m5myj1gqdymjrnky0azq17f"; depends=[fastICA mgcv]; }; - icamix = derive2 { name="icamix"; version="1.0.4"; sha256="17yag996m8gn4vfr6a8gcsrancdhjla5bm7fi23p1ln8i4hdz5v5"; depends=[Rcpp RcppArmadillo]; }; + icamix = derive2 { name="icamix"; version="1.0.5"; sha256="1r6rrjha8c1cy7qf682yzkw7i1qxzrcvs8g20vb77mzhzjq6d073"; depends=[Rcpp RcppArmadillo]; }; icapca = derive2 { name="icapca"; version="1.1"; sha256="131gdrk8vsbac0krmsryvsp21bn9hzxqxq847zn16cxjf6y5i3xb"; depends=[]; }; - icarus = derive2 { name="icarus"; version="0.2.0"; sha256="1qj0g4inl76128rjhn6g4w499y1yy75yvq31c408jz6akv8p2921"; depends=[]; }; + icarus = derive2 { name="icarus"; version="0.2.2"; sha256="1bs04j0xdf6b0mvczi8v3jyjdf2g99vfqr9by83a7gl9vpsar4kn"; depends=[]; }; iccbeta = derive2 { name="iccbeta"; version="1.0"; sha256="0zsf2b5nrv39pssi5walf82892fr8p1f802c96hjjknh78q7gh0h"; depends=[lme4 Rcpp RcppArmadillo]; }; - icd9 = derive2 { name="icd9"; version="1.3"; sha256="1k34s7zys2c6v6i7843yh8i5bh3j7axdv9xdlampdfx5pn5g29as"; depends=[checkmate fastmatch Rcpp]; }; - icenReg = derive2 { name="icenReg"; version="1.3.4"; sha256="0s3amjz8vz4y256wj85dg01vxhsyy1njgrsrw3l35z7ka9hxmcdf"; depends=[foreach MLEcens RcppEigen survival]; }; + icd = derive2 { name="icd"; version="2.1"; sha256="1634mpv1cgka8n1ws4lsqw8114q50rjrxcjlw16bq8igi1l4hrwq"; depends=[checkmate magrittr Rcpp testthat]; }; + icd9 = derive2 { name="icd9"; version="1.3.1"; sha256="0yrgg1vf9jf0kv4qbvc0d8n26csxx79g2196ijgq43rhprrrm1y6"; depends=[checkmate fastmatch Rcpp]; }; + icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; + icenReg = derive2 { name="icenReg"; version="1.3.6"; sha256="024iwpwbn3g2lsq9kn6p86m1qdj1ndlfakk6hsijc8akg0cmmzcg"; depends=[foreach MLEcens RcppEigen survival]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; + icesAdvice = derive2 { name="icesAdvice"; version="1.2-0"; sha256="0z3b31qj0wggd2yayvgivrpg9435bi8pmsp11rg2vwz4vfsqvlkb"; depends=[]; }; + icesDatras = derive2 { name="icesDatras"; version="1.2-0"; sha256="0arkn9ma03qb21sv5chmz5fj65da5ivqhvrg8bqibbky8zkix1vh"; depends=[]; }; + icesSAG = derive2 { name="icesSAG"; version="1.2-0"; sha256="05fj1sx9fbpyhmng7llmayc2m0gvfyak6ispjkwrx55hms17i5p9"; depends=[png]; }; + icesVocab = derive2 { name="icesVocab"; version="1.1-2"; sha256="15ha2visv44pphkahg766afafh6467lwznvppwkvqjrbfiijkc6l"; depends=[XML]; }; + icpsrdata = derive2 { name="icpsrdata"; version="0.3.0"; sha256="17sprbbi8fmvcp8d7hwrxl5amg0j036wq483cw62zbmni3p3fl82"; depends=[httr purrr rvest]; }; icsw = derive2 { name="icsw"; version="0.9"; sha256="0lmq9l9sy0fz3yjj2sj8f19iy26913caibf7d9zb9w9n6cqskvlx"; depends=[]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; - idbr = derive2 { name="idbr"; version="0.1.2"; sha256="1j9qjh5121aaasqd05qi0gw3cglfq355cq8wg23k3m3jcfm7ihh9"; depends=[dplyr httr jsonlite]; }; - idendr0 = derive2 { name="idendr0"; version="1.5.2"; sha256="18fblymbdl1i0sxfv911ls090hkhmwlk0q1dx4fhi54h16qqzjhf"; depends=[tkrplot]; }; - identifyr = derive2 { name="identifyr"; version="0.1"; sha256="011i6s7w7ss6vlyhwdj67hw4pwyvnn3vga89d3ykd3j3h1k615zp"; depends=[magrittr stringr]; }; + idbr = derive2 { name="idbr"; version="0.2"; sha256="1hhwn93arkzqs5ns9ll7rwqq5gyngixbicly9asw0dgjn12n5p7x"; depends=[countrycode dplyr httr jsonlite]; }; + idem = derive2 { name="idem"; version="1.0"; sha256="1knb5m0rczga7j3a58z7fjjn3nva7pihg2w3vh82dqpi8wwcnznj"; depends=[coda sqldf survival]; }; + idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; }; identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; - idm = derive2 { name="idm"; version="1.3.1"; sha256="1mysvkdkzwdggb081zbjb9bm8jxdygd4q3w50js1x26pr69kvzni"; depends=[animation ca corpcor dummies ggplot2]; }; + idm = derive2 { name="idm"; version="1.7.1"; sha256="1pn8iyfwcpp3zj51jjf0dvfc0rbh8f5smnbswxf186fqs9fkjpmy"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idr = derive2 { name="idr"; version="1.2"; sha256="05nvgw1xdg670bsjjrxkgd1mrdkciccpw4krn0zcgdf2r21dzgwb"; depends=[]; }; + ids = derive2 { name="ids"; version="1.0.0"; sha256="1wwp1phbgj1zcdgyq4fzca8hmgibcc01xmqlnm51nmm0n3ajki2v"; depends=[openssl uuid]; }; + ie2misc = derive2 { name="ie2misc"; version="0.8.5"; sha256="1i59836a3kjsra5ibk66ic35yqk28p3biylall8gngjssiig92c1"; depends=[data_table gWidgets2 gWidgets2tcltk lubridate openxlsx qdap reader readxl stringi]; }; + ie2miscdata = derive2 { name="ie2miscdata"; version="1.0.1"; sha256="1jqh5x5wnfv4cx3ck9k4kxchai7vfb3i968n5nq0yqgbvfii5kli"; depends=[]; }; ieeeround = derive2 { name="ieeeround"; version="0.2-0"; sha256="0xaxrlalyn8w0w4fva8fd86306nvw3iyz44r0hvay3gsrmgn3fjh"; depends=[]; }; - iemisc = derive2 { name="iemisc"; version="0.5.0"; sha256="1xy6nyk5bw9lx9bhfk5l2k3lp9b46anzamfbvhd3cgv94xh03vv2"; depends=[data_table pracma zoo]; }; - iemiscdata = derive2 { name="iemiscdata"; version="0.5.0"; sha256="0xvv5yva2swmr7nziik838wznk30j2j032s6m71xrvdbngr4cpnd"; depends=[]; }; + iemisc = derive2 { name="iemisc"; version="0.9.6"; sha256="0yr2pqklj3qjlmkk2sc5rgi8dfnm9jdaagzh2dhm05lharhfzy6d"; depends=[data_table fpCompare gsubfn iemiscdata pracma r_import zoo]; }; + iemiscdata = derive2 { name="iemiscdata"; version="0.6.1"; sha256="0a9x90kisgmrka0frk9myb1qdq3nl092n78wrif31b42arifa8h9"; depends=[]; }; + iemisctext = derive2 { name="iemisctext"; version="0.9.99"; sha256="02rr7sjjbrvfxwjl87f2ki245a8cw5fvx7z2z4rl8ixxlyxj9p5v"; depends=[]; }; ifa = derive2 { name="ifa"; version="7.0"; sha256="1cxafd7iwvyidzy27lyk1b9m27vk785ipj9ydkyx9z1v0zna2wnl"; depends=[mvtnorm]; }; - ifaTools = derive2 { name="ifaTools"; version="0.8"; sha256="1nmim5dw42wkzjw85g5raz899xa2whlyvz36jcpli69cx0zq3kqq"; depends=[ggplot2 OpenMx reshape2 rpf shiny]; }; + ifaTools = derive2 { name="ifaTools"; version="0.13"; sha256="1mffvlzm4flz7n26vllm28s1iib66gbqq7nl4yfwbdljrpp4ph23"; depends=[ggplot2 OpenMx reshape2 rpf shiny]; }; ifctools = derive2 { name="ifctools"; version="0.3.2"; sha256="18g0l0vh9z4nvl6jil32983c4z1dvawrivi4kz4g562q3habm279"; depends=[]; }; ifs = derive2 { name="ifs"; version="0.1.5"; sha256="03g9cgs0zp89b1d7rpcn5clkvmg0spnariwrifd8hha476ldvfcy"; depends=[]; }; - ifultools = derive2 { name="ifultools"; version="2.0-1"; sha256="16lrmajyfa15akgjq71w9xlfsr4y9aqfw7y0jf6gydaz4y6jq9b9"; depends=[MASS splus2R]; }; + ifultools = derive2 { name="ifultools"; version="2.0-4"; sha256="0pv2msaa1rmj8csxdclzi2jwg9pfdvh87blj9j3xa3myisglq092"; depends=[MASS splus2R]; }; ig_vancouver_2014_topcolour = derive2 { name="ig.vancouver.2014.topcolour"; version="0.1.2.0"; sha256="0yclvm6xppf4w1qf25nf82hg1pliah68z7h3f683svv0j62q748h"; depends=[]; }; igraph = derive2 { name="igraph"; version="1.0.1"; sha256="00jnm8v3kvxpxav5klld2z2nnkcpj4sdwv4ksipddy5mp04ysr6w"; depends=[irlba magrittr Matrix NMF]; }; igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; @@ -4851,175 +6056,225 @@ in with self; { igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; }; iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; }; - ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast survival]; }; + ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imPois = derive2 { name="imPois"; version="0.0.7.5"; sha256="15l2air707xnzxvgvzsv90m5pl8vvr9inywvmx7f7irn4syy0g3a"; depends=[geometry rgl]; }; - imager = derive2 { name="imager"; version="0.15"; sha256="0np23g1p097iv9qwbbrk69v2v025f91b30jaqh3621csv7hll095"; depends=[jpeg magrittr plyr png Rcpp stringr]; }; - imguR = derive2 { name="imguR"; version="1.0.1"; sha256="1pabgp1s3gkirxh5a95lmnrzgfdh04s9r63y9v9x43hmqg77jkw3"; depends=[httr jpeg png]; }; - immer = derive2 { name="immer"; version="0.4-0"; sha256="0g757149rmq5v1hwmd2q5fafz09dz5mcg29v5cx4n3p719xzpp8w"; depends=[CDM coda psychotools Rcpp RcppArmadillo sirt]; }; - import = derive2 { name="import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; + imageData = derive2 { name="imageData"; version="0.1-26"; sha256="0r39bp33kki2ddvds2jkpk1r6afl8d1xbl447lnz25dxpzfcajn2"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; + imager = derive2 { name="imager"; version="0.31"; sha256="1lknn7lk6g6mda2sqabxkdkv4aryfq1k4f0bmz6ym14y5j7kjlzz"; depends=[jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; }; + imagine = derive2 { name="imagine"; version="1.1.0"; sha256="0xmmm38vwya0dlycky3dllr9j015fbc98bwwcp8k7xmknvvnzz83"; depends=[Rcpp]; }; + imfr = derive2 { name="imfr"; version="0.1.3"; sha256="0i25fl8ixq1z2hv3gf1rh5ssnxxzxaxg30wi5ixngwnnwkljxbph"; depends=[dplyr httr jsonlite]; }; + imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; + immer = derive2 { name="immer"; version="0.7-0"; sha256="0pf0chrx1qbri0pkiz30pc2qcdmld0ajm7fljadzlnczs3bnr1na"; depends=[CDM coda psychotools Rcpp RcppArmadillo sirt]; }; + imp4p = derive2 { name="imp4p"; version="0.2"; sha256="1bymmfcchhmwdl0gq7x9llhykqzjw74c80x15mxs8dl9ha6fndc5"; depends=[imputeLCMD Iso truncnorm]; }; + r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; imprProbEst = derive2 { name="imprProbEst"; version="1.0.1"; sha256="09y8yd9sw0b79ca45ryi7p82vy5s8cx0gg603rlc39lgwcdv45i3"; depends=[inline lpSolve]; }; imputeLCMD = derive2 { name="imputeLCMD"; version="2.0"; sha256="10v3iv1iw6mnss6ry836crq9zdgid2y1h3pvigzjsrmnp5n89mfz"; depends=[impute norm pcaMethods tmvtnorm]; }; imputeMDR = derive2 { name="imputeMDR"; version="1.1.2"; sha256="0ds5a4wav9vb9z5nji8hv5l76310rd970xf702fd0ckx1sh6rgd7"; depends=[]; }; - imputeMissings = derive2 { name="imputeMissings"; version="0.0.1"; sha256="1xcgv725xs1vqg5b6psbmsgh7xikb8iasd9n7f8dxrlq3d1p5khv"; depends=[randomForest]; }; - imputeTS = derive2 { name="imputeTS"; version="0.4"; sha256="0prd7wcbikyzzfphqmrhxwgrpvpd129m3hvr217xmclr4gqrknsb"; depends=[stinepack]; }; + imputeMissings = derive2 { name="imputeMissings"; version="0.0.3"; sha256="1dfhi235j1qz2mv89j92b903j5mdwlzisiyvvi9mmiacdj5ln89z"; depends=[randomForest]; }; + imputeMulti = derive2 { name="imputeMulti"; version="0.6.4"; sha256="0ngjbj8pl5mwprrgy234a5p9dhf615z7ymfv8184hby1z6ib3mgl"; depends=[DBI gtools Rcpp RSQLite]; }; + imputePSF = derive2 { name="imputePSF"; version="0.1.0"; sha256="0xfd2mybg0cbi3n35j28s4xq4iwr5rq4mqwgdqml7l2rlzidcwc8"; depends=[PSF]; }; + imputeTS = derive2 { name="imputeTS"; version="1.8"; sha256="1r86fpv51jl1d5lskbx19c0njr5qdn0l8m3xj5brisvf035b7pp4"; depends=[forecast stinepack]; }; + imputeTestbench = derive2 { name="imputeTestbench"; version="3.0.0"; sha256="082ps3r4priv3r5w8gydvkjxp8r3nsrss964hdsff2kc5dsmqn14"; depends=[dplyr forecast ggplot2 imputeTS reshape2 tidyr zoo]; }; imputeYn = derive2 { name="imputeYn"; version="1.3"; sha256="1b21w1aa5f7yiq8k0wa86wvbg4ij7f6ldwn6asfqwb0b90rvsgvs"; depends=[boot emplik mvtnorm quadprog survival]; }; - in2extRemes = derive2 { name="in2extRemes"; version="1.0-2"; sha256="10ngxv4zsh78gm3xwb22m681nhl2qbnzi4fkqwgjj2iz46ychzvy"; depends=[extRemes]; }; + in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; inTrees = derive2 { name="inTrees"; version="1.1"; sha256="1b88zy4rarcx1qxzv3089gzdz1smga6ssj8cxxccyyzci6px85j1"; depends=[arules gbm RRF xtable]; }; inarmix = derive2 { name="inarmix"; version="0.4"; sha256="11a1vaxq22d5lab07jp5pw0znkaqj6bmkn6vsx62y6m4mmqk04yr"; depends=[Matrix Rcpp]; }; - inbreedR = derive2 { name="inbreedR"; version="0.3.1"; sha256="1a5iz5hkwa32nrc205ybjzm6nijr6b38ipyvcivsdz4maz3rlmhf"; depends=[data_table]; }; - indicspecies = derive2 { name="indicspecies"; version="1.7.5"; sha256="16m4pnfnmaskin4aaalm2cmv3vwzg94045max8nhkgw02kpskz1r"; depends=[permute]; }; + inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; + inca = derive2 { name="inca"; version="0.0.2"; sha256="1wj8f1ga0km9k9zrjcd7g228kw2pp6y6pgnfwmgdd05bx4hzjhdw"; depends=[Matrix Rcpp RcppArmadillo]; }; + incadata = derive2 { name="incadata"; version="0.5.3"; sha256="1mzwd9nida5spsqr5jayp3wn1h3cbv0amc5iyxx6h51gn0pwspkz"; depends=[backports decoder dplyr rccmisc sweidnumbr]; }; + incidence = derive2 { name="incidence"; version="1.1.1"; sha256="03dlgqz6mnayc5lvaalxdhdidzgq49djkd8129ymjmmcg6qwd2h4"; depends=[ggplot2 ISOweek]; }; + inctools = derive2 { name="inctools"; version="1.0.7"; sha256="0hw42i0zj8f156wkdc7v7njg6sgxkhhn84v2pg1qxwvlyy3daz0y"; depends=[cubature doParallel foreach ggplot2 glm2 MASS plyr pracma]; }; + indelmiss = derive2 { name="indelmiss"; version="1.0.7"; sha256="1pm1yl7kbxrik5ghvsvp6irmzgawxb8v03kvrqm48mnbghkdh1lv"; depends=[ape numDeriv phangorn Rcpp]; }; + indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; }; inegiR = derive2 { name="inegiR"; version="1.2.0"; sha256="14mpjyc85l9sznhn29cxk37l3y5yxclqiv2kgcwf8prpxfgwy83l"; depends=[jsonlite plyr XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; inferference = derive2 { name="inferference"; version="0.4.62"; sha256="12iag6l2digxb056qc765xi27ayc4qyqdqzbhxscr8a5lxfkdn4p"; depends=[Formula lme4 numDeriv]; }; - inflection = derive2 { name="inflection"; version="1.1"; sha256="1nb1pf07c371vwgplfyjs3q1iqgb5hyk9czxqrjiy18g8p7zdln2"; depends=[]; }; - influence_ME = derive2 { name="influence.ME"; version="0.9-6"; sha256="1pfp26dmqs6abb2djf9yn5jk4249vi8ldahpc2xrr0mr3l17g06g"; depends=[lattice lme4 Matrix]; }; - influence_SEM = derive2 { name="influence.SEM"; version="1.5"; sha256="0h920pxa3sk6y7ipkihxm78i06alm5rmlmn5pr937j7abgypkk3p"; depends=[lavaan]; }; + inferr = derive2 { name="inferr"; version="0.1.0"; sha256="13wgjh5b03kyx6jvdgpavr9qjzvr7plgml2ickq2gxkxczc05r2m"; depends=[dplyr magrittr purrr Rcpp tibble tidyr]; }; + inflection = derive2 { name="inflection"; version="1.2"; sha256="13mlyfcw13z9y48ypycypp6m7s2d7yx3n13vr2br4kwwn74hqky8"; depends=[]; }; + influence_ME = derive2 { name="influence.ME"; version="0.9-8"; sha256="0fnc0hk50sh4fd5jfgs1kd61psk7mrc85s1ihmficayivvl7iklb"; depends=[lattice lme4 Matrix]; }; + influence_SEM = derive2 { name="influence.SEM"; version="2.0"; sha256="113h4nrcik21vhfld143ivcij49vimzilq7nxn2d0821iz1dmnfg"; depends=[lavaan]; }; influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.5.1"; sha256="1aigd1fvpdqjplq1s1js0sy8px68q73lbp5q591rn52c77smdhaj"; depends=[MASS]; }; informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; }; infotheo = derive2 { name="infotheo"; version="1.2.0"; sha256="18xacczfq3z3xpy434js4nf3l19lczngzd0lq26wh22pvg1yniwv"; depends=[]; }; infra = derive2 { name="infra"; version="0.1.2"; sha256="0jycnnmrrjq37lv67xbvh6p63d6l4vbgf3i1z9y7r75d6asspzn1"; depends=[]; }; - infuser = derive2 { name="infuser"; version="0.2.2"; sha256="0hpy8s0090d7khkqlb733fa55n2g41fcx19dsjpazlk1j7bqrvxk"; depends=[]; }; + infraFDTD_assist = derive2 { name="infraFDTD.assist"; version="0.5"; sha256="1bgjfhwkbd0y1iwxq3qh80kshsd9g1r1gg99lr75n2i61qnnimnf"; depends=[fields]; }; + infuser = derive2 { name="infuser"; version="0.2.5"; sha256="0zq05i55gkwrvjs3mzh64ffwmxln3lrjqw3w87xy3ihsqjhxb2pg"; depends=[]; }; infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; + ini = derive2 { name="ini"; version="0.2"; sha256="0dzy2zzzczs7xnnm7v6achd6qsy2wbrvsgahkgbsrpvwxpcb79bp"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; inline = derive2 { name="inline"; version="0.3.14"; sha256="0cf9vya9h4znwgp6s1nayqqmh6mwyw7jl0isk1nx4j2ijszxcd7x"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2013.9.3"; sha256="13vk6v9723wlfv1z5fxmvxfqhaj68h0x3s2qq9j6ickr4wakb4ar"; depends=[]; }; - inpdfr = derive2 { name="inpdfr"; version="0.1.2"; sha256="0bsfyfpxps59nfyx21lh9n15gc1szikjmlqq5mvwnvwd61fly058"; depends=[ca cluster entropart metacom R_devices RColorBrewer RGtk2 SnowballC stringi tm wordcloud]; }; + inlmisc = derive2 { name="inlmisc"; version="0.2.4"; sha256="1j2wxzm45zzykm29swvqj6hdscgxq6094s4wwj6rr7nwpp9v3qni"; depends=[dplyr igraph knitr raster rgdal rgeos sp]; }; + inpdfr = derive2 { name="inpdfr"; version="0.1.3"; sha256="1qdnh4bcwhg587y4s1r27vqmx3i4fsg8gvnrl4gx1nk7r2fhsqxc"; depends=[ca cluster entropart metacom R_devices RColorBrewer RGtk2 SnowballC stringi tm wordcloud]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; insol = derive2 { name="insol"; version="1.1.1"; sha256="0zbawkp4qb0kqb7y9ibiyy8sa9rfgbzwmcdswx6s87p0h7brrqn6"; depends=[]; }; - instaR = derive2 { name="instaR"; version="0.2.2"; sha256="13p6j24c8yw3rqjac2q1s6s765bg8022wkhlbqh543lf7zx92rm0"; depends=[httr rjson]; }; - install_load = derive2 { name="install.load"; version="1.0.4"; sha256="18il5134halv8j5p6hks04i97aam3gcwgbss5yj1hmpf71dhqr4p"; depends=[]; }; + inspectr = derive2 { name="inspectr"; version="1.0.0"; sha256="04rpr5ajpdx1d49y327dryxwxk27yljj4c96i9qglf02i9kmplkg"; depends=[openxlsx]; }; + instaR = derive2 { name="instaR"; version="0.2.4"; sha256="0c4m471ragkpksr0h21cdgnjxcknf01xqz543dahxgzjg9ncjwhg"; depends=[httr jsonlite]; }; + install_load = derive2 { name="install.load"; version="1.2.1"; sha256="148q0rjal5hfcb8ilxzd1bz38mn8vxqrsfg5x4jy48psk00fk3d9"; depends=[]; }; insuranceData = derive2 { name="insuranceData"; version="1.0"; sha256="0wryh8i1v3bnpbqn6d6dpxr9bwwl6mnh5cb5igz0yanh4m1rx96w"; depends=[]; }; intReg = derive2 { name="intReg"; version="0.2-8"; sha256="0cqf6lbn8aiyj5j7gg1qz80i477bfxbmxp7fjs25ish4bcdsbjja"; depends=[maxLik miscTools sets]; }; intRegGOF = derive2 { name="intRegGOF"; version="0.85-1"; sha256="0fyvhl6jmi6krfbimsq61dhixlz9h9jxk4yjvwbx2vl8d9fnnr54"; depends=[]; }; - intamap = derive2 { name="intamap"; version="1.3-37"; sha256="17l1bifks0vsk0a3bj2g4w8qrvhmdh0p145kmd09223x9yc4mc9v"; depends=[automap evd gstat MASS mvtnorm sp]; }; + intamap = derive2 { name="intamap"; version="1.4-1"; sha256="1shyxlps1rxqavrvg55gw0c9115q0j3yw78ilavig7036zx5lazv"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-10"; sha256="073k6sdds40fmlbw1xnp3x5sc9qdyq2s1bhp7av4jjm930hsvsrn"; depends=[automap gstat intamap spatstat spcosa]; }; - intcox = derive2 { name="intcox"; version="0.9.3"; sha256="1m1lzmymh2pk570k6nxq3nj7wxkvs1s3nvz8cb456fnv72ng8fap"; depends=[survival]; }; interAdapt = derive2 { name="interAdapt"; version="0.1"; sha256="06ki36l1mrnd9lbm696a6gapr488dz8na4wvl9y1fif9hfv4zk25"; depends=[knitcitations knitr mvtnorm RCurl shiny]; }; interactionTest = derive2 { name="interactionTest"; version="1.0"; sha256="1ppc476glwf0bsr1wgzircvnhgn9kkbhy3rskfz671ma6fv3p67b"; depends=[]; }; intercure = derive2 { name="intercure"; version="0.1.0"; sha256="0j71dqcbcfl1zpfidh3xys5h3ggyhrzq3avkdm9v18pv464x8xlv"; depends=[foreach iterators MASS Matrix survival]; }; interferenceCI = derive2 { name="interferenceCI"; version="1.1"; sha256="19ky10nn6ygma6yy5h1krxx61aikh3yx5y39p68a944mz8f72vsn"; depends=[gtools]; }; intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; }; - internetarchive = derive2 { name="internetarchive"; version="0.1.5"; sha256="0zaf7nzdjr0wlvzrb6wr2nr42nq7l113i2zv9d7220wp75a5cwvd"; depends=[dplyr httr]; }; - interplot = derive2 { name="interplot"; version="0.1.2.0"; sha256="1m9zh028j9nr5by26qw5bihwxj7ys39xqk82fwwkd37yqfxybsnc"; depends=[abind arm ggplot2]; }; + internetarchive = derive2 { name="internetarchive"; version="0.1.6"; sha256="1cx9dxlrdz1xak4jrrjs2wsq6ml8n2xl0n0s6n9h3g247j4lfvnm"; depends=[dplyr httr]; }; + interplot = derive2 { name="interplot"; version="0.1.5"; sha256="0svhs7mj987vravirhmp4788qvqm32v614qj7q06b2y4va477yj8"; depends=[abind arm dplyr ggplot2]; }; interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; }; interval = derive2 { name="interval"; version="1.1-0.1"; sha256="1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"; depends=[Icens MLEcens perm survival]; }; intervals = derive2 { name="intervals"; version="0.15.1"; sha256="1r2akz8dpix1rgvdply4r3m2zc08r0n96w9c97hma80g61a3i2ws"; depends=[]; }; interventionalDBN = derive2 { name="interventionalDBN"; version="1.2.2"; sha256="0wpp4bfi22ncvl0vdivniwwvcqgnpifpgxb4g5jbyvr0z735cd9w"; depends=[]; }; intpoint = derive2 { name="intpoint"; version="1.0"; sha256="0zcv64a0clgf1k3ylh97q1w5ddrv227846gy9a68h6sgwc0ps88b"; depends=[]; }; introgress = derive2 { name="introgress"; version="1.2.3"; sha256="1j527gf7pmfy5365p2j2jbxq0fb0xh2992hj4d7dxapn4psgmvsk"; depends=[genetics nnet RColorBrewer]; }; - intsvy = derive2 { name="intsvy"; version="1.8"; sha256="0w8xyrmj35664pl9f9nmc2mqcds9l8g4y7nbjkmbqpx3nlfx5vxm"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; + intrval = derive2 { name="intrval"; version="0.1-1"; sha256="1p66cjpn43xib7rrnyv3jqr6bb49d3dxf888p8hxnr7kx9wfalkn"; depends=[]; }; + intsvy = derive2 { name="intsvy"; version="1.9"; sha256="080vklwfrnm5gfcympwi1llipkk5a3qh2xw6m91k9p6xyvnl3rrz"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; + intubate = derive2 { name="intubate"; version="1.0.0"; sha256="03ikqwai7wdahdfyzdy42xs8qpdhl9gmbak2qd82yxjl62956i8c"; depends=[]; }; + inum = derive2 { name="inum"; version="0.9-1"; sha256="11aks7y41298rqdbawg016akam99qxf2f6rwwkkvzp62syp2ip6g"; depends=[]; }; invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; }; invLT = derive2 { name="invLT"; version="0.2.1"; sha256="0dcr2cclgzkvsw1lysmjrkwgahas96rjc328yc7a1a56pf62kw2v"; depends=[]; }; - investr = derive2 { name="investr"; version="1.3.0"; sha256="057wq6c5r7hrg1nz7460alsjsk83cvac2d1d4mjjx160q3m0zcvj"; depends=[nlme]; }; - io = derive2 { name="io"; version="0.2.2"; sha256="07vifr1h8ldiam8ngp6yrx6mvdnmmnnsq3hcs2pyphws6hgdmwwh"; depends=[filenamer stringr]; }; + investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; }; + invgamma = derive2 { name="invgamma"; version="1.0"; sha256="1himzbglmf0w5a4bz62qq26z7kd07ljz98ybgcqxsmdagdd9jl55"; depends=[]; }; + io = derive2 { name="io"; version="0.2.4"; sha256="1y2va6hcsdzsak6ljgj4sxin5zfr4azrqc8b9qlxcaajyyji2crx"; depends=[filenamer stringr]; }; ioncopy = derive2 { name="ioncopy"; version="1.0"; sha256="1idk899zxvpvnswdwlpkhy5v8id6xmrbp6hg4rmrlpp3wfxw3ad5"; depends=[multtest]; }; ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; }; + ionicons = derive2 { name="ionicons"; version="0.1.1"; sha256="0v7icjx2bpb0hd3j8a14lijklyjkmw7qgp336z66wzscm6f411ip"; depends=[png rsvg xml2]; }; ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; - iosmooth = derive2 { name="iosmooth"; version="0.91"; sha256="03kyzhcl5lipaiajs53dc8jaazxv877nl0njbq88cp4af3gd6s82"; depends=[]; }; + iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; }; + iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; iotools = derive2 { name="iotools"; version="0.1-12"; sha256="1b2crnhx84h1gp10sy2mkhi9vylp9z97ld16jijddzlf4v23bmlx"; depends=[]; }; ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; - ipdw = derive2 { name="ipdw"; version="0.2-4"; sha256="0dlj8bfgqjf6yam11c74yhz1yj553a15sf1wgqdvf9912jpi3j54"; depends=[gdistance raster sp]; }; + ipdw = derive2 { name="ipdw"; version="0.2-5"; sha256="1a0xlhzmnc3l3fvn1v3rgxwg0va0418yq62i2dlq0l5djcfbxyc3"; depends=[gdistance raster sp]; }; ipflasso = derive2 { name="ipflasso"; version="0.1"; sha256="12cyn7wpkrjqrjccb26mi375ijqplps4216ldj7w3az9g8pzihv3"; depends=[glmnet survival]; }; ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; }; + ipft = derive2 { name="ipft"; version="0.2.2"; sha256="1wncz4plz8gziv33yvwkdiw7shpbhs357ag0i9350yn5h9zhhp9b"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; iplots = derive2 { name="iplots"; version="1.1-7"; sha256="052n8jdhj8gy72xlr23dwd5gqycqnph7s1djg1cdx2f05iy693y6"; depends=[png rJava]; }; ipred = derive2 { name="ipred"; version="0.9-5"; sha256="193bdx5y4xlb5as5h59lkakrsp9m0xs5faqgrp3c85wfh0bn8iis"; depends=[class MASS nnet prodlim rpart survival]; }; + iprior = derive2 { name="iprior"; version="0.6.4"; sha256="1cpp0cp6cfdrh23wjjqvng9dszjmp5a90bgd6sbgcfckn2si0ly1"; depends=[RColorBrewer Rcpp RcppEigen]; }; ips = derive2 { name="ips"; version="0.0-7"; sha256="0r4394xbchv6czad9jz4ijnfz8ss3wfdvh7ixrdxic2xrw0ic90v"; depends=[ape colorspace XML]; }; - iptools = derive2 { name="iptools"; version="0.3.0"; sha256="03i3n3v75vdlfk1z4pq6256pmb907mm60hl2gzhf7dyjvfzrm9p0"; depends=[AsioHeaders BH Rcpp]; }; + iptools = derive2 { name="iptools"; version="0.4.0"; sha256="0c3j5sl129xl75p14qr880ll1y3yss3zqg39zbj2jp6wcv9rvafx"; depends=[AsioHeaders BH ISOcodes Rcpp]; }; ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; iqLearn = derive2 { name="iqLearn"; version="1.4"; sha256="0vgnfr6x6f6qlnag63brnkdymlmm2vbkl8fg02w98qsc48lal454"; depends=[]; }; - irace = derive2 { name="irace"; version="1.07"; sha256="187lwi19qcq2kqxca0233qs6k36n9fsnnh9xqwjga15snn4vlrlq"; depends=[]; }; - irlba = derive2 { name="irlba"; version="2.0.0"; sha256="1gms3rxrm24ri4vjvnpl4v47m7bx0zk63z8y85rbhsvx230xdy0m"; depends=[Matrix]; }; + iqspr = derive2 { name="iqspr"; version="1.0"; sha256="18kld8w1qwgyvs61irk80n56lj6mcy0mlrnvsq3940hhbcpmx61k"; depends=[rcdk]; }; + irace = derive2 { name="irace"; version="2.1"; sha256="0q3k8jd2s7m20vdx8bfjh3kwgqjyymkfwdfgmbflmlj8q1km8iqc"; depends=[]; }; + irlba = derive2 { name="irlba"; version="2.1.2"; sha256="1qbcn0ix85pmk296jhpi419kvh06vxm5cq24yk013ps3g7fyi0si"; depends=[Matrix]; }; irr = derive2 { name="irr"; version="0.84"; sha256="0njxackqj8hyf9j1yszwxbnaxgp27fc2bwyyf7dip72wc12f81n5"; depends=[lpSolve]; }; + irtDemo = derive2 { name="irtDemo"; version="0.1.2"; sha256="1kbab06lwldyp5ra71rgn4habq6yl6ggl5km1sj9bbqa6n4gqvwz"; depends=[fGarch shiny shinydashboard]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; - irtoys = derive2 { name="irtoys"; version="0.1.7"; sha256="11nz675haigs6vg08qjibs8yccy2pbz0b9r8761fs8gw3n7bpfz4"; depends=[ltm sm]; }; + irtoys = derive2 { name="irtoys"; version="0.2.0"; sha256="1rjw7f8r7kg4yrlkv6cwiiggm6hgx3gqc4jzcmvvmv0ycyi2w3pw"; depends=[ltm sm]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; isa2 = derive2 { name="isa2"; version="0.3.4"; sha256="12qbfvcj8whhy7d68l7ra5wnkpx87ldl6mir7r5n8afb3fkww0kp"; depends=[lattice]; }; isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; - isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.3"; sha256="1rkry39yhxvq3ypnnxgdv15kd5w0l5w56ywmkcsgkwlxdfrvlyn2"; depends=[]; }; - ismev = derive2 { name="ismev"; version="1.40"; sha256="1isxgq62q6dk50c3w1l0j4nfgwsj6c2wnx2sm3ncxzlqml0ih6jn"; depends=[mgcv]; }; - isocir = derive2 { name="isocir"; version="1.1-3"; sha256="1bx68n9wyfs2dcgph66rsy0jw8hjkl5kw212l0563kz3m1nik9sr"; depends=[circular combinat]; }; + isdparser = derive2 { name="isdparser"; version="0.2.0"; sha256="061wi94rj3iyvf3dgvcjy0x46hvwhr4ifx0jhirz44bj0c8g3h7j"; depends=[data_table tibble]; }; + isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; + island = derive2 { name="island"; version="0.1.2"; sha256="0b7i1j7prb5v5392cl1n0w9migx4dl6f1ys4d2g82hd9l0y1m6nm"; depends=[]; }; + ismev = derive2 { name="ismev"; version="1.41"; sha256="19vmjgz1baqkryi34ffhjznc46z3zwqaqblwafhk9fd50xgn4bi6"; depends=[mgcv]; }; + isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; }; isopam = derive2 { name="isopam"; version="0.9-13"; sha256="0y1yy0922kq5jxyc40gz8sk9vlzwfkfg5swmc6lk4007g9mgc8fm"; depends=[cluster vegan]; }; isopat = derive2 { name="isopat"; version="1.0"; sha256="0fznvgycyd35dh7pbq1xhp667gsficlmycn5pcrqcbs89069xr1s"; depends=[]; }; isoph = derive2 { name="isoph"; version="0.5"; sha256="1a3brp8w3xs3l25x1nn5213jj5mrzzfl4fm34l7ry97g4s9d8sh3"; depends=[Iso Rcpp survival]; }; isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; }; isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; }; - isva = derive2 { name="isva"; version="1.8"; sha256="09mrvvk09j460dzi45z8hwdpmibfshsii5dcp38g13czr40d48na"; depends=[fastICA qvalue]; }; - itcSegment = derive2 { name="itcSegment"; version="0.1"; sha256="1x6hxr55d7ny9mmm4zhadnx5rvli8nwbh9cjqlzl1lpa7w5sfiri"; depends=[maptools raster rgeos sp]; }; + isva = derive2 { name="isva"; version="1.9"; sha256="05qx9q0kg4ma23v4abhihw0vz017nq6hv2jzsiqx4d20ngh1dl4z"; depends=[fastICA JADE qvalue]; }; + itcSegment = derive2 { name="itcSegment"; version="0.2"; sha256="121k0j5w47c10ws0dwcl1qd3ryichx5m86mzf2w3249p6wj54y7j"; depends=[maptools raster rgeos sp]; }; iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; }; iterLap = derive2 { name="iterLap"; version="1.1-2"; sha256="0ixh9aw115496ib0iswfsj97rjcd2f02z116dg57vl9hhzh28f13"; depends=[quadprog randtoolbox]; }; iterators = derive2 { name="iterators"; version="1.0.8"; sha256="1f057pabs7ss9h1n244can26qsi5n2k3salrdk0b0vkphlrs4kmf"; depends=[]; }; - iterpc = derive2 { name="iterpc"; version="0.2.8"; sha256="096x2q8bx95ilyq5zpkqgzpfyrbj0j4fwvdivc4zf3ybd2fm4fjp"; depends=[iterators polynom Rcpp]; }; + iterpc = derive2 { name="iterpc"; version="0.3.0"; sha256="1l1qsjmqwabbmrvl4rx50fynn1p62f0g48hkx71p3gv9asr4zifz"; depends=[gmp iterators Rcpp]; }; itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; }; itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; }; itree = derive2 { name="itree"; version="0.1"; sha256="164zgr142hcp9plnbccs6m823p4m0prk73bvp54bc7bqnqmc3d9a"; depends=[]; }; - its = derive2 { name="its"; version="1.1.8"; sha256="1g9qmdrw7qiw0xiryf7bf5m9prrba7r11jyzprzdglc1akizav8a"; depends=[Hmisc]; }; - itsadug = derive2 { name="itsadug"; version="2.0"; sha256="0s77f060xb2lkddd116snpvsbs73wz8kwv4hkd6yv0m2fpamvpvx"; depends=[mgcv]; }; + itsadug = derive2 { name="itsadug"; version="2.2"; sha256="01a80a6vni3g4xph3p8i0jrlqgqhdyswhv7w6vbxhbmawbzffxyx"; depends=[mgcv plotfunctions]; }; itsmr = derive2 { name="itsmr"; version="1.5"; sha256="0l9m5is6d6pkpfkihx0jir5iv8zmqqav8vh9bkkpqv5iz61p4kxb"; depends=[]; }; ivbma = derive2 { name="ivbma"; version="1.05"; sha256="0d7kg6pkdx1aj1i6kqs2r7j1klxxwymml63qnrq6a6fia3ck9kk9"; depends=[]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; ivlewbel = derive2 { name="ivlewbel"; version="1.1"; sha256="0ykcfikm2i28s3fm6zzx8cjvpwhksg8an0rfr0b35gf7p69brgag"; depends=[gmm lmtest plyr]; }; - ivmodel = derive2 { name="ivmodel"; version="1.1"; sha256="18hq667ls552vq59dhirx5q9ky252p3cjvkhm3d017bdpi3m1hq5"; depends=[Matrix]; }; + ivmodel = derive2 { name="ivmodel"; version="1.2"; sha256="0jpvkk33ihxsla2j4b4spp2dv7b7rq49x46m9lc9zp6020w91b3a"; depends=[Formula Matrix]; }; ivpack = derive2 { name="ivpack"; version="1.2"; sha256="0cr5acjrn41d3q0b77hlg2jmsbf1msvys9gcavm1blsryg2bc03c"; depends=[AER lmtest sandwich]; }; ivpanel = derive2 { name="ivpanel"; version="1.0"; sha256="0irjmkw3nnd8ssidvj23lr0hihlhd9acsbaznh88lknx53ijc2qv"; depends=[Formula]; }; ivprobit = derive2 { name="ivprobit"; version="1.0"; sha256="1kijq7k6iv2ybaxb08kqzm2s2k6wp2z50r01kxcq023pmyfjczwy"; depends=[]; }; jSonarR = derive2 { name="jSonarR"; version="1.1.1"; sha256="054q3ly471xa64yyz2as6vkr440ip1y8n5wl6s3zbhqy3bqkdqif"; depends=[jsonlite RCurl]; }; - jaatha = derive2 { name="jaatha"; version="3.1.1"; sha256="017iysn4g196q36b9d7dw19hahvh2ngv872nmx36a84rxs3ymnav"; depends=[assertthat R6]; }; + jaatha = derive2 { name="jaatha"; version="3.2.0"; sha256="00886j0cabrq6a69w8s1gsfkmx1wqs1vpxjafpm71msk54r0dj55"; depends=[assertthat R6]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstraw = derive2 { name="jackstraw"; version="1.1"; sha256="0p79b8vgjspi3hjqqrhrfvf0k9rzg7ycn7azax3pk28j2cvi30j2"; depends=[corpcor lfa]; }; - jagsUI = derive2 { name="jagsUI"; version="1.4.2"; sha256="0c8sg3zc40imircnkk5f8wbvqb2jz5li87m3wxcdr8djcs7yasx8"; depends=[coda lattice rjags]; }; + jacpop = derive2 { name="jacpop"; version="0.5"; sha256="056c82d4a10rgq0p4p63y9i94dy1kqp3yh7xms9nx9q2xb940xb5"; depends=[]; }; + jagsUI = derive2 { name="jagsUI"; version="1.4.4"; sha256="0jfziaxxrlf1izp7s61d7xckdx33hnbq1cs2zlp7c9bcpp4mdkzv"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; - jetset = derive2 { name="jetset"; version="3.1.3"; sha256="1m19p99ghh3rb0kgbwnyg0aaq011xcsrcf0llnbs9j5l2ziwvg4x"; depends=[AnnotationDbi org_Hs_eg_db]; }; - jiebaR = derive2 { name="jiebaR"; version="0.8"; sha256="1qf27lrz02w94vxqjqbp94xxi38jzhjblcg4c1n82ngpzmfb44qc"; depends=[jiebaRD Rcpp]; }; + janeaustenr = derive2 { name="janeaustenr"; version="0.1.4"; sha256="1yxk94acscq43gs3m0n0x3805dr71kn4wf3ws7rg62p2bd22b09i"; depends=[]; }; + janitor = derive2 { name="janitor"; version="0.2.1"; sha256="14jb3viyrmxc0grrkkw86z6s7c3sq0a07mhpyzw1xsy5gfda29yi"; depends=[dplyr tidyr]; }; + jetset = derive2 { name="jetset"; version="3.3.0"; sha256="1lyjrakk8f25541v7q3zwam7xbxykh75r0czk6qvil92a9y1005r"; depends=[AnnotationDbi org_Hs_eg_db]; }; + jiebaR = derive2 { name="jiebaR"; version="0.9.1"; sha256="1qv4k5fgi40ppivdk3mxkhawyf2443h2lz5b9gvai9sqj6vf0s8k"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; - jmcm = derive2 { name="jmcm"; version="0.1.1.0"; sha256="1mijj7c5n48jkka162rd2297gq8lijhrwg6r5wd1b7dq5r1ahgby"; depends=[Formula Rcpp RcppArmadillo]; }; + jmcm = derive2 { name="jmcm"; version="0.1.7.0"; sha256="0qq7dc6i5w5r276r7l9j29f783s41y3gp70hj5cz72wkmhdnvg4j"; depends=[Formula Rcpp RcppArmadillo]; }; jmetrik = derive2 { name="jmetrik"; version="1.0"; sha256="0xnbvby03fqbxgg0i0qxrrzjv98783n6d7c1fywj81x487qlj77j"; depends=[]; }; - jmotif = derive2 { name="jmotif"; version="1.0.2"; sha256="0m3zz0xr2f6y8igwcg8a3rbyl3a6m8viyp0pcjbdwyj2400dbf3m"; depends=[Rcpp RcppArmadillo]; }; - jmuOutlier = derive2 { name="jmuOutlier"; version="1.1"; sha256="17mg2aa2mn25448yky647xrvm3dmsjhl751j8ywcd8af2wf8vyrn"; depends=[]; }; - joineR = derive2 { name="joineR"; version="1.0-3"; sha256="0q98nswbxk5dz8sazzd66jhlg7hv5x7wyzcvjc6zkr6ffvrl8xj7"; depends=[boot gdata lattice MASS nlme statmod survival]; }; - joint_Cox = derive2 { name="joint.Cox"; version="2.4"; sha256="18r1h9spcjg6yc37nqralf6ac04hgvfhqfviv8ldc7fl5nw8ws5q"; depends=[]; }; + jmotif = derive2 { name="jmotif"; version="1.0.2.900"; sha256="0zgj1g8vy2cj2kyschbr1xb1mb862gniva0sa8qr9p8vvb03ja4v"; depends=[Rcpp RcppArmadillo]; }; + jmuOutlier = derive2 { name="jmuOutlier"; version="1.3"; sha256="1lzqpdy2987szihsjaq6l1iggjhji0li4cj7914myj3vzfcif8gw"; depends=[]; }; + jmv = derive2 { name="jmv"; version="0.7.0.3"; sha256="0knrpnr2mpq2h1s6xis6wsf3k6yc142mfmrmp8s53s29zlzs6ljr"; depends=[afex BayesFactor car GGally ggplot2 GPArotation jmvcore lsmeans lsr multcomp PMCMR psych R6 vcd vcdExtra]; }; + jmvcore = derive2 { name="jmvcore"; version="0.4.0"; sha256="0kga95ryxvvgdlc1z9s53bmasfizyl6gvxjwp55nf2k0pm0lx6sf"; depends=[base64enc R6 rjson]; }; + jocre = derive2 { name="jocre"; version="0.3.1"; sha256="01mnd2dzm3bnbdxg0grj10ashpxzgsk68lfx7ssxk7pnfxnbc39h"; depends=[boot KernSmooth plyr]; }; + joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; + joineR = derive2 { name="joineR"; version="1.1.0"; sha256="13b3syh20d0wrfh8gama16ajc73nzd5rq4pgyrdw8m94ybmg559v"; depends=[lattice MASS nlme statmod survival]; }; + joineRML = derive2 { name="joineRML"; version="0.1.1"; sha256="0m8cyjrhbk0bspigpjh30g74084hdn0q4zg9364vp2dmna092m47"; depends=[lme4 MASS Matrix nlme Rcpp RcppArmadillo survival]; }; + joint_Cox = derive2 { name="joint.Cox"; version="2.10"; sha256="1vfndask1njl01h4vqbsbhvd5vpy432wapp6vz2byddb358hg4rh"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.2"; sha256="0y1gzrc79vahfhn4jrj5xys8pmkzxj4by7361730gi347f0frs0a"; depends=[]; }; + jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; - jomo = derive2 { name="jomo"; version="2.1-1"; sha256="1wxisjskjnm0y48amn0zwb1ih7jvbjcfihs7az1vvgmlz2y2vc7n"; depends=[]; }; + jomo = derive2 { name="jomo"; version="2.3-1"; sha256="0qwg5aank84w2jwlni470v9s7x0xnnpb1bib9r2y6j32fikyd09a"; depends=[]; }; + jose = derive2 { name="jose"; version="0.1"; sha256="1cvrjcx902pbh9xryph1kilmyf0rmbk671jvqd19a2kfwpcw7gqc"; depends=[jsonlite openssl]; }; jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; }; + jpmesh = derive2 { name="jpmesh"; version="0.3.0"; sha256="0sv199f72l5wczqlvyykpcjap68lw11pdv6lwl47ynz350vxdzlm"; depends=[broom dplyr foreach geojsonio leaflet magrittr miniUI purrr readr rgdal shiny sp tibble tidyr]; }; + jqr = derive2 { name="jqr"; version="0.2.4"; sha256="1w4832pymnavgrlhldqg1mdf0bkd3rwfywgd98hxik51yadfszjb"; depends=[BH lazyeval magrittr Rcpp]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.03"; sha256="16mki26ns593xn1p1la2ihkddlwvzwdvjr3h2vz71bq5db11iffq"; depends=[]; }; js = derive2 { name="js"; version="0.2"; sha256="1dxyyrmwwq07l6pdqsvxscpciy4h1021h9ymx8hi2vqvv0mdrz76"; depends=[V8]; }; - jsonlite = derive2 { name="jsonlite"; version="0.9.19"; sha256="1hbdraj3xv2l2gs9f205j8z054ycy0bfdvwdhvpa9qlji588sz7g"; depends=[]; }; + jsonld = derive2 { name="jsonld"; version="1.1"; sha256="1bmfdcyjcz3cgy0vkliwvd97kww8djdib08bsq99v485gspl2x87"; depends=[curl jsonlite V8]; }; + jsonlite = derive2 { name="jsonlite"; version="1.2"; sha256="0k966hzp3qnwck7fgd76w49zrz39s7pqyywws17bhbcd8rh4csyb"; depends=[]; }; + jsonvalidate = derive2 { name="jsonvalidate"; version="1.0.0"; sha256="08c1s8fk95np4l6km077dmd1nibhhggi80f5465hhbq521gm0awl"; depends=[V8]; }; + jtGWAS = derive2 { name="jtGWAS"; version="1.5"; sha256="01f1wrbgj7v6pzrx5vd8pgpm78fanyx59s84m5a5732q5g39shlk"; depends=[Rcpp]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; - jug = derive2 { name="jug"; version="0.1.1"; sha256="0dv6v8nxrbvlyhchzjq0m4x5v88ayrrw5xgrphx865ywsxllrb85"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 stringi]; }; + jug = derive2 { name="jug"; version="0.1.4"; sha256="1rf3akm9w5sbp59w1070ygqz1b9krq6lilbxp9r4w234c8k81a27"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 webutils]; }; + junr = derive2 { name="junr"; version="0.1.1"; sha256="1rkr6kyf2p3rr39w0nqfvcrcd2b0r411if7812zijnn20vrmsmda"; depends=[httr jsonlite]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; - kSamples = derive2 { name="kSamples"; version="1.2-3"; sha256="0pb32pdh23qm1svfayk50bv75mbz50rc62013sdx1h9zmrcz5f37"; depends=[SuppDists]; }; - kantorovich = derive2 { name="kantorovich"; version="1.1.0"; sha256="06c1w6wqhlsx30lyy4126llbvaalppsibwwikw2dn316898vslg4"; depends=[gmp rcdd]; }; + jwutil = derive2 { name="jwutil"; version="1.1.1"; sha256="114vph86722v89iwyla7skl06cv87ymfy6nmca5iyxwx1z78zddz"; depends=[checkmate Rcpp]; }; + kSamples = derive2 { name="kSamples"; version="1.2-4"; sha256="1k026wbzcrzzr3ji3gdnhbj13nrmbp6ybbcki3v3gk6s0xk6f2rx"; depends=[SuppDists]; }; + kamila = derive2 { name="kamila"; version="0.1.1.1"; sha256="06jl868i8a6zg3pyaf1r6ccd33ya5f83apc5w6d3m111dzdqqlcy"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; }; + kantorovich = derive2 { name="kantorovich"; version="2.0.0"; sha256="0y965nkhgk0z2q2j3sycfg76aqqi3ry8avg0bz9xggpd60bhh5vd"; depends=[gmp lpSolve rcdd Rglpk]; }; kappaSize = derive2 { name="kappaSize"; version="1.1"; sha256="0jrjal8cvy2yg0qiyilmv3jl3ib5k9jg8gp2533kdsx4m0sack04"; depends=[]; }; kappalab = derive2 { name="kappalab"; version="0.4-7"; sha256="16bwbwwqmq2w7vy8p3wg0y80wfgc8q5l1ly1mqh51xi240z1qmq0"; depends=[kernlab lpSolve quadprog]; }; kaps = derive2 { name="kaps"; version="1.0.2"; sha256="0jg4smbq51v88i3815icb284j97iam09pc52rv3izxa57nv9a0gz"; depends=[coin Formula survival]; }; karaoke = derive2 { name="karaoke"; version="1.0"; sha256="1kx11lijdffhhh8prjgsamshgg2v29b2i129fjqi079waa335352"; depends=[seewave tuneR]; }; kcirt = derive2 { name="kcirt"; version="0.6.0"; sha256="1gm3c89i5dq7lj8khc12v30j1c0l1gwb4kv24cyy1yw6wg40sjig"; depends=[corpcor mvtnorm snowfall]; }; - kdecopula = derive2 { name="kdecopula"; version="0.5.0"; sha256="1cwd81fhjzdzmsn9mnj71bzqf1s5hwlaq4sijww0d81i6nwcafjl"; depends=[cubature lattice locfit qrng Rcpp RcppArmadillo VineCopula]; }; + kdecopula = derive2 { name="kdecopula"; version="0.8.0"; sha256="1s116d6qh4zc7gazhylhzcwiifkd2xmaqi58r4ns82d7rv54gkaf"; depends=[lattice locfit qrng quadprog Rcpp RcppArmadillo]; }; kdetrees = derive2 { name="kdetrees"; version="0.1.5"; sha256="1plf2yp2vl3r5znp5j92l6hx1kgj0pzs7ffqgvz2nap5nf1c6rdg"; depends=[ape distory ggplot2]; }; + kdevine = derive2 { name="kdevine"; version="0.3.0"; sha256="0imi8n70xw8bmxnqw4fam6d85ib7bhaygg3q56xrml7mn2wik4gc"; depends=[doParallel foreach kdecopula ks qrng Rcpp VineCopula]; }; kedd = derive2 { name="kedd"; version="1.0.3"; sha256="17rwz3yia95xccbxwn43wr6c9b3062094yfahnnnk3wfijyhlxiq"; depends=[]; }; keep = derive2 { name="keep"; version="1.0"; sha256="12803hhrs9v94rv6qaihk1f1ls7lx4cy2pa30v4p1r2z9afx9bjf"; depends=[]; }; + kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; - kequate = derive2 { name="kequate"; version="1.5.0"; sha256="0yalh3j5kcz3zxk1afny7v22n7y5xzbifqifrr1sjm8czi8hdi01"; depends=[equateIRT ltm mirt]; }; + kequate = derive2 { name="kequate"; version="1.6.0"; sha256="0m8l1d43gb25zdwbv0ymnazm02m2qxg5pcir37n55sl08dh0zyby"; depends=[equateIRT ltm mirt]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; kergp = derive2 { name="kergp"; version="0.2.0"; sha256="1xamj19v84m1f9ls8ac8xbm6airyjf96i1l48yy4l2rvjdmx6m9l"; depends=[doParallel MASS numDeriv Rcpp testthat]; }; - kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="1.0.1"; sha256="03viwv4fsdby10pqimhgfjv8l654gvggrw4xxikc81w2iyachar8"; depends=[DiceKriging glmnet globalOptTests lhs mvtnorm Rcpp RcppEigen]; }; + kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="2.0.1"; sha256="1ypyb6i64jskq2agbpb6wc6y3fn4i7z4fjjfpl97q8f0rif1lpfj"; depends=[caret DiceKriging DiceOptim GA GenSA glmnet globalOptTests lhs matrixStats mvtnorm Rcpp RcppEigen]; }; kerndwd = derive2 { name="kerndwd"; version="1.1.2"; sha256="1d55qrayay3d5p7lxj50mv1yj3l1xh10i3j937lmjn83ffhdq40a"; depends=[]; }; kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; - kernlab = derive2 { name="kernlab"; version="0.9-23"; sha256="01y1vy1798wspg5qczvgr1k2fmp8pv2y9h8x5kqf0pp73qba9lpg"; depends=[]; }; - keyplayer = derive2 { name="keyplayer"; version="1.0.1"; sha256="0ms5zvb3shhhzry2aab749dyiklj8bf55mzlkvsy1as8f7mpf6ar"; depends=[matpow sna]; }; + kernlab = derive2 { name="kernlab"; version="0.9-25"; sha256="0qnaq9x3j2xc6jrmmd98wc6hkzch487s4p3a9lnc00xvahkhgpmr"; depends=[]; }; + kernscr = derive2 { name="kernscr"; version="1.0.3"; sha256="0h3xv76dxch8kv4z7cgx60iaikk6906n75c4kc1mccpw0jvyxrvb"; depends=[MASS mvtnorm]; }; + keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.0.0"; sha256="16msbanmbv2kf09qvl8bd9rf1vr7xgcjzjhzngyfyxv90va3k86b"; depends=[]; }; + keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; }; kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; kimisc = derive2 { name="kimisc"; version="0.3"; sha256="1cdjhfdfidilvz0w92xfjwwnp2h73y8l1n7fxnh5jsv6wnx491l4"; depends=[plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; kinfit = derive2 { name="kinfit"; version="1.1.14"; sha256="0gb43pghgllb9gzh8jzzpfmc46snv02ln4g3yqsdah3cyqnck0ih"; depends=[]; }; + kinn = derive2 { name="kinn"; version="0.2"; sha256="14vckrk3sppxswccy4qiyc7pbzkwncwag4acbkbqfnm84pxblh3m"; depends=[caret caTools igraph KRLS mclust stringr]; }; kinship2 = derive2 { name="kinship2"; version="1.6.4"; sha256="19r3y5as83nzk922hi4fkpp86gbqxdg1bgng798g1b073bp6m9yj"; depends=[Matrix quadprog]; }; kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; kitagawa = derive2 { name="kitagawa"; version="2.1-0"; sha256="1ddyd0rwwmdpbq823qass5dlp2lvi9d64wpl61ik6fghms2p9ryr"; depends=[kelvin]; }; - kknn = derive2 { name="kknn"; version="1.3.0"; sha256="17lg3dy5b4vs7g6d83ai9chz94sm6bla9rk42gzyqlf9n341cji4"; depends=[igraph Matrix]; }; + kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; klaR = derive2 { name="klaR"; version="0.6-12"; sha256="10nkqb1zradbvifgv1fm373mhyydgdjjgmnw2442a2lark59z3vs"; depends=[combinat MASS]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; klin = derive2 { name="klin"; version="2007-02-05"; sha256="0j0hr4bppzk754a66q5z42h7jzfavqpxgl7y266804aginfqm1ax"; depends=[Matrix]; }; @@ -5027,7 +6282,7 @@ in with self; { kmc = derive2 { name="kmc"; version="0.2-2"; sha256="0ldyhlqdrbygvhpy4b9xp52zjvjmb0gaph0v9fhla707f63i21m5"; depends=[emplik Rcpp rootSolve]; }; kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; }; kmeans_ddR = derive2 { name="kmeans.ddR"; version="0.1.0"; sha256="1i87cxakjbq1xwyjyyzv1xiqbrncsqx6baviidcdm3n0pakrqdsg"; depends=[ddR Rcpp]; }; - kmi = derive2 { name="kmi"; version="0.5.1"; sha256="0519mi7kwrsfpili7y8nmyiky6qwf8xkd0n7cwj02c8d119bk9sa"; depends=[mitools survival]; }; + kmi = derive2 { name="kmi"; version="0.5.2"; sha256="0w440r3daksghvimbm0avp6c3rjvxaxsawvn7ig5bwnw60kry9il"; depends=[mitools survival]; }; kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; }; kml3d = derive2 { name="kml3d"; version="2.4.1"; sha256="1xp95fm7ncmf5mpcc9zkqf6h89g4a7qdgc2snrsy16znsjmncssq"; depends=[clv kml longitudinalData misc3d rgl]; }; kmlShape = derive2 { name="kmlShape"; version="0.9.5"; sha256="1p35ihjq84jnzq78yksdblc0c1qcn13f8n4khddsxcqvk3a44xb1"; depends=[class kml lattice longitudinalData]; }; @@ -5035,165 +6290,204 @@ in with self; { kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; knitcitations = derive2 { name="knitcitations"; version="1.0.7"; sha256="0sx7sxrmm9x01sh3bcp9qqpvljfss9f1hr6h4dcfns8x6f60s5v6"; depends=[digest httr RefManageR]; }; - knitr = derive2 { name="knitr"; version="1.12.3"; sha256="1v3rzv6wq8mvpdrljsaqk4z3f8323jnv385js24wmn4fglqly6dz"; depends=[digest evaluate formatR highr markdown stringr yaml]; }; + knitr = derive2 { name="knitr"; version="1.15.1"; sha256="1pbxd3k7kv5sa1a5gxm0zc2bhjxdgx2nfch9xap5k85djmgsfqc1"; depends=[digest evaluate highr markdown stringr yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.0"; sha256="0pshn2slzqwpryklslsxwh1dmqcnwv6bwi7yfm6m342wjybpk0wl"; depends=[knitr markdown rmarkdown]; }; knnGarden = derive2 { name="knnGarden"; version="1.0.1"; sha256="1gmhgr42l6pvc6pzlq5khrlh080795b0v1l5xf956g2ckgk5r8m1"; depends=[cluster]; }; knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; }; knockoff = derive2 { name="knockoff"; version="0.2.1"; sha256="197icnyxxmi6f0v0p2zm4910grbgkfjkd3xql79ny04ik047v0kp"; depends=[glmnet RJSONIO]; }; - koRpus = derive2 { name="koRpus"; version="0.06-4"; sha256="16pc52a63zyn68hfgqb9yim5wcmmyd8w1qfhg5skcf1v4lvs8yjl"; depends=[]; }; + knotR = derive2 { name="knotR"; version="1.0-1"; sha256="02mr950150m2gzagxf5yzps8fnwspagh3k8prh9zww2jss0471rm"; depends=[]; }; + kntnr = derive2 { name="kntnr"; version="0.4.0"; sha256="0vcmm4vjawmyaqpqv0g6y5dfcixn0rjhcfr3nfc2781a4w7ydnc9"; depends=[base64enc dplyr httr jsonlite lazyeval lubridate purrr rstudioapi stringr]; }; + koRpus = derive2 { name="koRpus"; version="0.06-5"; sha256="0anip3m7shp8lj2xd2gks7cbwxfkhp3pz9hn7ijf7b5q5r4gvl15"; depends=[]; }; kobe = derive2 { name="kobe"; version="1.3.2"; sha256="1z64jwrq6ddpm22cvk2swmxl1j7qyz0ddk3880c7zfq6gk7f9bxl"; depends=[coda emdbook ggplot2 MASS plyr reshape]; }; kofnGA = derive2 { name="kofnGA"; version="1.2"; sha256="1j4gx6pkmasgbgcdlg6i5nzfrmim61c2hw34k5zfmwfbkrsgb575"; depends=[]; }; kohonen = derive2 { name="kohonen"; version="2.0.19"; sha256="0fi94m2gpknzk31q3mjkplrq9qwac8bjc8hdlb3zxvz6rabbhxrr"; depends=[class MASS]; }; + kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.2.0"; sha256="1sk7r5v3d65w126vin9gawan3f21zrd9ps974l9nxj7kv1pa3szh"; depends=[digest dplyr httr purrr rgdal shiny xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; + kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; }; kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; - krm = derive2 { name="krm"; version="2015.3-4"; sha256="0zm2d3naprvv10ac28k4h2r6f1ygi8wic0gwbm6mvgwpb530gga1"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.10.2"; sha256="0fjnnwlf60hdipw0aqbi0w6szhg4dswdim9fbfq56wkj68ax4003"; depends=[KernSmooth misc3d multicool mvtnorm rgl]; }; + krm = derive2 { name="krm"; version="2016.7-9"; sha256="0yc8agnb4685fa00pnwsxwc4vnr2aj2dwb6zxppj62r6c59xl47f"; depends=[kyotil]; }; + ks = derive2 { name="ks"; version="1.10.5"; sha256="12ianxlfrdzvb56y42p3mpyl01fqxrm97xym4wghvqyz59w0x51k"; depends=[KernSmooth misc3d multicool mvtnorm rgl]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; kst = derive2 { name="kst"; version="0.2-1"; sha256="1wy9cvvln994qgr0p7qa9qs1jd7gjv6ch65gg6i42cf9681m9h65"; depends=[proxy relations sets]; }; ktsolve = derive2 { name="ktsolve"; version="1.1"; sha256="0b5myr093v3qaj9gzbw1w728i5ij418whxxpicj51w657dcy647k"; depends=[]; }; ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; + kutils = derive2 { name="kutils"; version="0.93"; sha256="18p6cxvzfp3vq4058g6kjf0zgavs4yx69ppx6mxbazaqkjq2vysg"; depends=[lavaan openxlsx plyr xtable]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.2.1"; sha256="0rjnhhzvjhhl0r2ixz9vkgnqkrnnk772253zy7xkpadj7ws69jsf"; depends=[hydroGOF lattice]; }; - kyotil = derive2 { name="kyotil"; version="2015.11-13"; sha256="0q1xw1dhs02d6fjf6vjns15b1y11h34g4m7scsyvp9dch260bljf"; depends=[]; }; - kza = derive2 { name="kza"; version="3.2.0"; sha256="0h2ri3cvg2x0xd7z4nmxf9f5yiaznfrripmv4h4jhs719xbmlcxk"; depends=[]; }; + kyotil = derive2 { name="kyotil"; version="2016.11-9"; sha256="02lcnljpj9yvxmk5drxgz94m6kw8nx8bh6n1wzivplw8cfqh6d5s"; depends=[]; }; + kza = derive2 { name="kza"; version="4.0.0"; sha256="0yfn6ijbskdkcgbgk4fwhgiiy34cw9k9vy1psi779mqd9kyjf56j"; depends=[]; }; + kzfs = derive2 { name="kzfs"; version="1.0.1.5"; sha256="041cwg3sz5zfngm7qj9v2cx2023n8r8by08541573261ihca1inl"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; kzs = derive2 { name="kzs"; version="1.4"; sha256="1srffwfg0ps8zx0c6hs2rc2y2p01qjl5g1ypqsbhq88vkcppx1w9"; depends=[lattice]; }; + l0ara = derive2 { name="l0ara"; version="0.1.3"; sha256="0igav0wxvnnjcrh1wqzgvn91ndq9a25yxhxyddnsfvn6f45rc0wn"; depends=[Rcpp RcppArmadillo]; }; l2boost = derive2 { name="l2boost"; version="1.0"; sha256="1p0sbvlnax4ba4wjkh3r0bmjs601k590g7bdfk6wxvlj42jxcnkl"; depends=[MASS]; }; - laGP = derive2 { name="laGP"; version="1.2-1"; sha256="0b614bl87kyfd19a3gznmlgzf9v3mwscxrylgc0s08s0mg6411p8"; depends=[tgp]; }; + laGP = derive2 { name="laGP"; version="1.3-2"; sha256="197mp5rlrfyp9aankbi1lw40vn7m9pkkq7rpr1a6y7x4sp3spr4m"; depends=[tgp]; }; labdsv = derive2 { name="labdsv"; version="1.8-0"; sha256="0rbf7cswnj534jdi5hfaai12nbxj6l96f02c73ynraqvdqxb1bnz"; depends=[cluster MASS mgcv]; }; - label_switching = derive2 { name="label.switching"; version="1.5"; sha256="0hkz5ncmkp4687xz24bk4ypmvp65lahaf23b07jwis2i7wvmldg2"; depends=[combinat lpSolve]; }; + label_switching = derive2 { name="label.switching"; version="1.6"; sha256="0k6f31gwcjfncsgd5cm9zygplif2wr8zjqrw4gmrnxcgp2z58a9w"; depends=[combinat lpSolve]; }; labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; + labelled = derive2 { name="labelled"; version="1.0.0"; sha256="02jg7zq52wfq2dw8a26vmp28bv88v651ysbqfqf7jv3dr9xgim4f"; depends=[haven]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; labeltodendro = derive2 { name="labeltodendro"; version="1.3"; sha256="13kpmv26zzjf5iwpr4vs797irplmaixp1agx5v80wr4lvd2hirvg"; depends=[]; }; labstatR = derive2 { name="labstatR"; version="1.0.8"; sha256="1qs76vhw6ihsriq5v0s980fxbb0pbvgwqm0a97b226cpqqabkpfm"; depends=[]; }; - labstats = derive2 { name="labstats"; version="1.0"; sha256="1cij8dibbmixbg3mf87rdypypl1rsy5wlgfsyhg7l8zg1i2gql1z"; depends=[]; }; + labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; laeken = derive2 { name="laeken"; version="0.4.6"; sha256="1rhkv1kk508pwln1d325iq4fink2ncssps0ypxi52j9d7wk78la6"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; - lakemorpho = derive2 { name="lakemorpho"; version="1.0"; sha256="0kxd493cccs24qqyw58110d2v5w8560qfnbm6qz7aki0xa7kaqrg"; depends=[geosphere maptools raster rgdal rgeos sp]; }; + lakemorpho = derive2 { name="lakemorpho"; version="1.1.0"; sha256="1qdh67a6a6iibvvba12z763xf989qfh08b3xgk1hy1irgc8myvll"; depends=[cluster geosphere maptools raster rgdal rgeos sp]; }; laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; }; - lamW = derive2 { name="lamW"; version="1.1.0"; sha256="0kxp16riyj4gvzigx1dg3hl1jjd9w6d9mzbsf67wqdcml38wn4c6"; depends=[Rcpp]; }; - lambda_r = derive2 { name="lambda.r"; version="1.1.7"; sha256="1lxzrwyminc3dfb07pbn1rmj45kplxgsb17b06pzflj728knbqwa"; depends=[]; }; - lambda_tools = derive2 { name="lambda.tools"; version="1.0.7"; sha256="1hskmsd51lvfc634r6bb23vfz1vdkpbs9zac3a022cgqvhvnbmxb"; depends=[lambda_r]; }; + lamW = derive2 { name="lamW"; version="1.2.0"; sha256="06kznvlrbllizw1byf5nrnpdk2hjjp0bf84wr9dcb5pph4pmnarl"; depends=[Rcpp RcppParallel]; }; + lambda_r = derive2 { name="lambda.r"; version="1.1.9"; sha256="1j6287iqvs3ill6r5g6ksf5809qp0l0nf20ib8266m1r09lc9j14"; depends=[]; }; + lambda_tools = derive2 { name="lambda.tools"; version="1.0.9"; sha256="1wslxxh6rxny3n06y16dqwpczi3k42vrq4pbwwshl6kzhl56r45b"; depends=[lambda_r]; }; landest = derive2 { name="landest"; version="1.0"; sha256="1lp5sfqk0n7i23fmwjgzsabml1fsji1h9xq5khxzaz1bzqv1s08g"; depends=[survival]; }; landpred = derive2 { name="landpred"; version="1.0"; sha256="1bl17xkx18i8i7arccnjmxvhjn4yiy7w64hg4n0xmhk8pg0l3mrg"; depends=[survival]; }; landsat = derive2 { name="landsat"; version="1.0.8"; sha256="07zvj1yyryxk7rwgcrf1kl32p2karkkqz6xrnwy1096dg9iw2js7"; depends=[lmodel2 mgcv rgdal sp]; }; - landsat8 = derive2 { name="landsat8"; version="0.1-9"; sha256="027p4cpxnx25m77z0n5kl4rs0zywwskv7ncfky0fldffg7mqaq42"; depends=[rgdal sp]; }; + landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; + landscapeR = derive2 { name="landscapeR"; version="1.1.3"; sha256="0mgnm1gq19ybq7dwv5agxyrldiv4743np8b9r2ql2h6gwk8rp5f7"; depends=[raster]; }; languageR = derive2 { name="languageR"; version="1.4.1"; sha256="0grkhdjz9dcrgq6qwv7wpwmckn3mfv022c5wrx29b1dxafd0qzm0"; depends=[]; }; + languagelayeR = derive2 { name="languagelayeR"; version="1.0.0"; sha256="0lca079nnqppbr7k5pfa7qfc879kws34hrxcs49y12qfv7hsk576"; depends=[httr magrittr rjson]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; + largeList = derive2 { name="largeList"; version="0.3.0"; sha256="0lviw0rzpd7453y0swab74kg8yc2byg88ca1fmf1f8zffgrdx9ld"; depends=[]; }; + largeVis = derive2 { name="largeVis"; version="0.1.10.2"; sha256="16qsc0jv8gbacgjal6hkqdm52yd0n973bkgab0zp1hldj9m4ykl2"; depends=[dbscan ggplot2 Matrix Rcpp RcppArmadillo RcppProgress testthat]; }; lars = derive2 { name="lars"; version="1.2"; sha256="0blj44wqrx6lmym1m9v6wkz8zxzbjax2zl6swgdczci0ixb5nx34"; depends=[]; }; laser = derive2 { name="laser"; version="2.4-1"; sha256="1f6j3xdks0w63fqjj9q8ng2m6ss90kcnsrigwal0bqskpvrpiqyz"; depends=[ape geiger]; }; lasso2 = derive2 { name="lasso2"; version="1.2-19"; sha256="0zkwjsd42a6z4gylq9xbs4z8n1v7ncwvssjnn3h4yz1icjfzzlvk"; depends=[]; }; + lassopv = derive2 { name="lassopv"; version="0.1.3"; sha256="07b7n74z4jvrirf0rc0sbvz9nm2s2s22mb8y973iwpf0i7fqxq2c"; depends=[lars]; }; lassoscore = derive2 { name="lassoscore"; version="0.6"; sha256="1i3i07da8sw9w47rcflhylz8zxvzkyycbc1a4gf6hbcpp21rqd7d"; depends=[glasso glmnet Matrix]; }; lassoshooting = derive2 { name="lassoshooting"; version="0.1.5-1"; sha256="0ixjw8akplcfbzwyry9p4bhbcm128yghz2bjf9yr8np6qrn5ym22"; depends=[]; }; lasvmR = derive2 { name="lasvmR"; version="0.1.2"; sha256="1yzyfacr47wkpv9bblm7hvx1hgnzbhy1421bpnh95xfxxlzahy5n"; depends=[checkmate Rcpp]; }; - latdiag = derive2 { name="latdiag"; version="0.2-2"; sha256="1893xcwpvpv3d3pnkzxjqgbbn9cw8gqg9pbg8vaas39785jq29sp"; depends=[]; }; + latdiag = derive2 { name="latdiag"; version="0.2-3"; sha256="0i2mqk3ldg5kf4d8sfljgjsqbdin7v69anmc2rrxgy28bmvykf9d"; depends=[]; }; latentnet = derive2 { name="latentnet"; version="2.7.1"; sha256="0bjac9cid11pmhmi2gb4h3p4h9m57ngxx7p73a07afmfjk9p7h5m"; depends=[abind coda ergm mvtnorm network sna statnet_common]; }; latex2exp = derive2 { name="latex2exp"; version="0.4.0"; sha256="12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw"; depends=[magrittr stringr]; }; - lattice = derive2 { name="lattice"; version="0.20-33"; sha256="0car12x5vl9k180i9pc86lq3cvwqakdpqn3lgdf98k9n2h52cilg"; depends=[]; }; + lattice = derive2 { name="lattice"; version="0.20-34"; sha256="0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"; depends=[]; }; latticeDensity = derive2 { name="latticeDensity"; version="1.0.7"; sha256="1y33p8hfmpzn8zl4a6zxg1q3zx912nhqlilca6kl5q156zi0sv3d"; depends=[spam spatstat spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-28"; sha256="1hkyqsa7klk5glj9y1hg3rxr5qilqw8h0017zc4c3nps7lr9a1kq"; depends=[lattice RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.4.1"; sha256="1xwyfn31nr8sppxy25a7p8yhf5isq4ah0dd45plhfclnlwrycr1l"; depends=[numDeriv]; }; + lava = derive2 { name="lava"; version="1.4.7"; sha256="1gzla8ns3n899vfz80yjx8bb2pcnrvp52c5rxxw591clba1x9jym"; depends=[numDeriv survival]; }; lava_tobit = derive2 { name="lava.tobit"; version="0.4-7"; sha256="1da98d5pndlbbw37k64fmr2mi1hvkhjxsmm3y9p4b772pz9i1pvj"; depends=[lava mvtnorm survival]; }; - lavaan = derive2 { name="lavaan"; version="0.5-20"; sha256="0vkgx0qg1xw6z89rb0lqc42pbiid4n7zhwa3zn61x9hn16y7avza"; depends=[MASS mnormt pbivnorm quadprog]; }; - lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.0"; sha256="0g8snpfnz7r9ckjhjaggdh1rbxrzvm63qkrx1zp30x7i32f52bzd"; depends=[lavaan psych semPlot shiny shinyAce]; }; - lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3"; sha256="1rjh0dk2rphn3aphnghpls0sckch889p5nddpwqqbqmbbzcvfgpi"; depends=[lavaan MASS survey]; }; - lawn = derive2 { name="lawn"; version="0.1.6"; sha256="1v1f6jpz5zwfhvpwjyyqlm57rfxd38hg6bq9h2aayx2lgq5spfam"; depends=[jsonlite magrittr V8]; }; - lawstat = derive2 { name="lawstat"; version="3.0"; sha256="0398bf4jv0gnq54v6m7zl5sixspnvfwc3x3z492i38l215pc38kx"; depends=[Hmisc Kendall mvtnorm VGAM]; }; + lavaan = derive2 { name="lavaan"; version="0.5-22"; sha256="1z6b4xf9zymyikmi8q4kj0cn6xy8m2p31yc6zah539jk9cxpi304"; depends=[MASS mnormt pbivnorm quadprog]; }; + lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.1"; sha256="06k9myq33p9jz7rz6ffansgi27ang4gq0s179vgsrdi10krxxg1b"; depends=[lavaan psych semPlot shiny shinyAce]; }; + lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; + lawn = derive2 { name="lawn"; version="0.3.0"; sha256="0rws76dzpi2gpn90la663r1g9ywvpvjicjmgb6z7k5xg1gspgs5c"; depends=[jsonlite magrittr V8]; }; + lawstat = derive2 { name="lawstat"; version="3.1"; sha256="0sdsxh2h06d3maqd1pvmnnvphaxav0z2kv5wpiy7dg17cgwv35c2"; depends=[Hmisc Kendall mvtnorm VGAM]; }; lazy = derive2 { name="lazy"; version="1.2-15"; sha256="1pdqgvn0qpfg5hcg5159ccf5qj2nd1ibai9p85rwjpddfynk6jks"; depends=[]; }; - lazyData = derive2 { name="lazyData"; version="1.0.3"; sha256="1i4jry54id8hhfla77pwk3rj2cci6na36hxj7k35k8lx666fdam2"; depends=[]; }; + lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; }; lazyWeave = derive2 { name="lazyWeave"; version="3.0.1"; sha256="02c3z479y6xxng2x6vp6m0rvf3jsb9n26h00l93djxads8717i1x"; depends=[Hmisc]; }; - lazyeval = derive2 { name="lazyeval"; version="0.1.10"; sha256="02qfpn2fmy78vx4jxr7g7rhqzcm1kcivfwai7lbh0vvpawia0qwh"; depends=[]; }; + lazyeval = derive2 { name="lazyeval"; version="0.2.0"; sha256="1jwdz40nznlc44hpjli7h98gnpa4d98ifggmj7z88h84n9aqywqk"; depends=[]; }; + lazyrmd = derive2 { name="lazyrmd"; version="0.2.0"; sha256="0ahm1wspvm625lx7y2zz05bvv66rlswphs84vpkcqb0dqfcn3s48"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; - lba = derive2 { name="lba"; version="1.2"; sha256="0zfln5dc4v3yaqgdbg22nq3z2by7jnbbi9mwwwvkr4j1z70knpqg"; depends=[alabama ca MASS plotrix]; }; + lba = derive2 { name="lba"; version="2.4.1"; sha256="15ipqv6jxmiypxkzfx2gwz770nqhcp81a0ci0fzw39g2ayjs5sr3"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13"; sha256="1jpy0j52w8kc8qnwcavjp3smvdwm1qgmswa9jyljpf72ln237vqw"; depends=[numDeriv]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; + lbreg = derive2 { name="lbreg"; version="1.0"; sha256="03pr5mjk3pfnlfafx6gk9xjsy4m5m7lj4zzvsngl95rr8hnnvvlf"; depends=[MASS]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; - lcmm = derive2 { name="lcmm"; version="1.7.5"; sha256="0xw411vhrh7l72wwc114rm0qiaxzl2gi8sm32qy9i8mry4623cj2"; depends=[survival]; }; - lcopula = derive2 { name="lcopula"; version="0.205"; sha256="0ni8q5cdzrkcjxjj1z6kyzd0sp592vnrh3yxnwh2vl9wc41v59i9"; depends=[copula pcaPP Rcpp]; }; - lctools = derive2 { name="lctools"; version="0.2-4"; sha256="0sfb26j0mgnnzql2ylj2d3cll67j7axyr1n20sv3zgx7nblkzkjj"; depends=[MASS pscl reshape weights]; }; + lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; + lcmm = derive2 { name="lcmm"; version="1.7.6"; sha256="04vapw0iwwsx3zn5q84cildr7aprr9pyrkq4gacfi8baahpqj1w9"; depends=[survival]; }; + lcopula = derive2 { name="lcopula"; version="1.0"; sha256="07a9k5fp03s6jnjawg11j4458xrsrrqxv6kf3cs58ymv0j2s1qyd"; depends=[copula pcaPP Rcpp]; }; + lctools = derive2 { name="lctools"; version="0.2-5"; sha256="02xbcmdz12vxi1hjrhibavnf792lqpjraknxz6sqz7fhfqrd8qbq"; depends=[MASS pscl reshape weights]; }; lda = derive2 { name="lda"; version="1.4.2"; sha256="03r4h5kgr8mfy44p66mfj5bp4k00g8zh4a1mhn46jw14pkhs21jn"; depends=[]; }; - ldamatch = derive2 { name="ldamatch"; version="0.6.3"; sha256="0pq62rsbvhn506n1qz8nvyl0lfkqyl80k6jq2g5c4iqf8vpcjasz"; depends=[data_table entropy foreach iterators iterpc kSamples MASS RUnit]; }; - ldatuning = derive2 { name="ldatuning"; version="0.1.0"; sha256="04313zyz5mk652hb7vqklg8ibdgf41bcr85whc2rfcxfwq0jpwpi"; depends=[ggplot2 reshape2 Rmpfr scales slam topicmodels]; }; + ldamatch = derive2 { name="ldamatch"; version="1.0.1"; sha256="1dmmjw7h0rrgwga7235bryzzvmx68gmkpy5v1pwvnkk4rxp8xamh"; depends=[car data_table entropy foreach gmp iterators iterpc kSamples MASS RUnit]; }; + ldatuning = derive2 { name="ldatuning"; version="0.2.0"; sha256="18nm4hj7733c1cp03hyddnivhiiyv7ndnw9m6j3af019jjmvf215"; depends=[ggplot2 reshape2 Rmpfr scales slam topicmodels]; }; + ldbod = derive2 { name="ldbod"; version="0.1.1"; sha256="1c34k16d740b8xfb6b2igl12hzqll87dsgm631ksp53v7j3qg7pz"; depends=[mnormt RANN]; }; ldbounds = derive2 { name="ldbounds"; version="1.1-1"; sha256="15ixrq615x64zmi6dryq3ww0dqxd0qf5xx1bs3w934sf99l46bhs"; depends=[lattice]; }; ldlasso = derive2 { name="ldlasso"; version="3.2"; sha256="0ij68zvgm8dfd2qwx6h6ygndac29qa0ddpf11z959v06n8jsnk11"; depends=[GenABEL quadprog]; }; ldr = derive2 { name="ldr"; version="1.3.3"; sha256="1c48qm388zlya186qmsbxxdcg1mdv3nc3i96lqb40yhcx2yshbip"; depends=[GrassmannOptim Matrix]; }; + ldstatsHD = derive2 { name="ldstatsHD"; version="1.0.0"; sha256="1phz9hwhfw7lcvz5gg0l3w3j3jig0bw4wxbx6j4z7dlr4bisyng8"; depends=[camel cluster corpcor evd fExtremes huge igraph MASS Matrix RBGL robustbase VGAM]; }; leaderCluster = derive2 { name="leaderCluster"; version="1.2"; sha256="1lqhckarqffm2l3ynji53a4hrfn0x7zab7znddia76r2h6nr02zb"; depends=[]; }; - leaflet = derive2 { name="leaflet"; version="1.0.1"; sha256="1hwv3aay1pl48kzd8wz073jbfky47d9lr1xv0iawnv31r488wnpj"; depends=[base64enc htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp]; }; - leafletR = derive2 { name="leafletR"; version="0.3-3"; sha256="00xdmlv6wc47lzlm43d2klyzcqljsgrfrmd5cv8brkvvcsyj57kq"; depends=[brew jsonlite]; }; + leaflet = derive2 { name="leaflet"; version="1.1.0"; sha256="05faikqdlbsj9lvl1lvhmagys71597jvgah8b9f1fqhgyj0bwx7l"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; }; + leafletCN = derive2 { name="leafletCN"; version="0.2"; sha256="10kkclna64jwfmmn5rw91rb4f0cxqr62027vp1699iqm553dvhhd"; depends=[htmltools jsonlite leaflet magrittr sp]; }; + leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; }; leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; - leaps = derive2 { name="leaps"; version="2.9"; sha256="1ax9v983401hvb6cdswkc1k7j62j8yk6ds22qdj24vdidhdz5979"; depends=[]; }; + leaps = derive2 { name="leaps"; version="3.0"; sha256="11gjmn1azrjw5xlvdb4gknj9985kck9x8zb9np1rnk2smp6pka2m"; depends=[]; }; learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; + learningCurve = derive2 { name="learningCurve"; version="1.0"; sha256="0hfd793kk1rl224y2vb51b0xf29xinix9q91nv51047lm6hkcfah"; depends=[ggplot2]; }; learningr = derive2 { name="learningr"; version="0.29"; sha256="1nr4ydcq2mskv4c0pmf0kxv5wm8pvjqmv19xz5yaq0j834b0n5q7"; depends=[plyr]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; - lessR = derive2 { name="lessR"; version="3.4.4"; sha256="1z59hhf4g9dv9pyk51166v26lfrih2rb4xh46zwa4jdxg0scmarm"; depends=[ellipse foreign leaps MBESS readxl sas7bdat triangle]; }; + lessR = derive2 { name="lessR"; version="3.5.5"; sha256="05pf0l4irsv71c7ywdq92gwl58caphjxlxkls6vs89prib2bj4sf"; depends=[ellipse foreign leaps png readxl sas7bdat triangle]; }; lestat = derive2 { name="lestat"; version="1.8"; sha256="12w3s5yr9lsnjkr3nsay5sm4p241y4xz0s3ir56kxjqw23g6m80v"; depends=[MASS]; }; - letsR = derive2 { name="letsR"; version="2.4"; sha256="12jazq54rn1mxh7ff7hd88mqwn0n85dn0mhdbli81sr4kdnd37sl"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; + letsR = derive2 { name="letsR"; version="2.6"; sha256="19gs0xlbjvx95047pzzl36x42898qkc61qgr1isavf7hph41ak46"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; lettercase = derive2 { name="lettercase"; version="0.13.1"; sha256="0s2s42v6a3mlz6084sk5wcbap3czgbd53f9p64pxwd1yfj18lbyx"; depends=[stringr]; }; - lfactors = derive2 { name="lfactors"; version="0.7.0"; sha256="0kcn8l3k33q43mpgp862p3vfh2j58mdp3bixryyys76hhqfghqsw"; depends=[]; }; - lfda = derive2 { name="lfda"; version="1.1.1"; sha256="1af4yl1k0p1wr3zar0syyjk0bc0nkng01afp5vchh7h5bb7nza8k"; depends=[plyr rARPACK]; }; - lfe = derive2 { name="lfe"; version="2.4-1788"; sha256="1f4b8s7n40j23hab4jn6crrwagwj68vb7c31k68i748zwwnf0xjc"; depends=[Formula Matrix sandwich xtable]; }; - lfl = derive2 { name="lfl"; version="1.2"; sha256="0l922sjpdiy4ifhizl1l2azzwg83j8fy8j5bvwx6yd3fvxas51ns"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; - lfstat = derive2 { name="lfstat"; version="0.8.0"; sha256="00vjkn5q4k3bqd1xfvi2s15csc126v4x0y1iiipdvs9pqwy9hc63"; depends=[dygraphs lattice latticeExtra lmom lmomRFA xts zoo]; }; + lexRankr = derive2 { name="lexRankr"; version="0.3.0"; sha256="0afgjzcmhnrq30n1mkzx51f0yk369ds5sh47a4z8z56w2w5sb8ik"; depends=[dplyr igraph magrittr Rcpp SnowballC stringr tidyr tm]; }; + lexicon = derive2 { name="lexicon"; version="0.1.1"; sha256="0iibyzmgmkkmw0x7n9j1hklf7ff0r0aayb7khg9wbgsa7x1z20im"; depends=[]; }; + lfactors = derive2 { name="lfactors"; version="1.0.0"; sha256="0j2sq3kh9qgc8z7q8j6fl2n4zih8b7y1yapswsw928b1glava8p7"; depends=[]; }; + lfda = derive2 { name="lfda"; version="1.1.2"; sha256="0y59iigcpmyrmsiwrpv5agja6vz3wxmxd9sl5hbf1ybm4d0lyky4"; depends=[plyr rARPACK]; }; + lfe = derive2 { name="lfe"; version="2.5-1998"; sha256="0i1vs9m8a9dadansczwg7jbah73bnxvidrld9inf8xyi8x15265z"; depends=[Formula Matrix sandwich xtable]; }; + lfl = derive2 { name="lfl"; version="1.3"; sha256="14x731f4gnwisd0l14l03bpmn4m2rizdfrc36bjh3lvjbv0raqhs"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; + lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; lga = derive2 { name="lga"; version="1.1-1"; sha256="1nkvar9lmdvsc3c21xmrnpn0haqk03jwvc9zfxvk5nwi4m9457lg"; depends=[boot lattice]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; - lgcp = derive2 { name="lgcp"; version="1.3-14"; sha256="1n9nmxgyzw6f27lx47bfz3cp62yxhdx07dh8b3wlf7b2nyx8jgjz"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat]; }; - lgtdl = derive2 { name="lgtdl"; version="1.1.3"; sha256="00lffc60aq1qjyy66nygaypdky9rypy607mr8brwimjn8k1f0gx4"; depends=[]; }; - lhs = derive2 { name="lhs"; version="0.13"; sha256="1wi21iyzsr6z3ina2iplqzymg9rspr6im0aik4gmh9qdbw1lj258"; depends=[]; }; + lgcp = derive2 { name="lgcp"; version="1.3-15"; sha256="16a8bg40pravg7jxnqxp74rnncgwxy5jki27038497ask5yxzpdd"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat]; }; + lgtdl = derive2 { name="lgtdl"; version="1.1.4"; sha256="0y519hgrm2ynbhbs61vi8gkhwqgn69wpnd391wpgf4yrg2lx064b"; depends=[]; }; + lhs = derive2 { name="lhs"; version="0.14"; sha256="1qnr3s9511nq3xqdbngllmw3mvnnpblma5dafyghxlpvydc2l481"; depends=[]; }; libamtrack = derive2 { name="libamtrack"; version="0.6.3"; sha256="0pdwrz19q1yls0rgr4579f31j86awizx3j31h7vdh6y70ngpmb82"; depends=[]; }; - lifecontingencies = derive2 { name="lifecontingencies"; version="1.1.10"; sha256="1j1m5s8bsxl21rjy3jy12babd69kkd1c4awpi14wh09w45d3pvfr"; depends=[markovchain Rcpp]; }; + libcoin = derive2 { name="libcoin"; version="0.9-1"; sha256="0whxgylcrhm03yln8k11cxr3bcjkvhyqhgj0yc8wc4avaq6gl1dh"; depends=[mvtnorm]; }; + libsoc = derive2 { name="libsoc"; version="0.5"; sha256="0p01mcwnkb4g3dq0mx1gbwfbznp4b2dmhs8k8wmnh7wll16v9i6z"; depends=[]; }; + lidR = derive2 { name="lidR"; version="1.1.0"; sha256="04skxqjcq27fbkfc274575r215iv13xhjyzdwlr2hf6ksnn54jdf"; depends=[data_table lazyeval magrittr RANN raster Rcpp rgeos rgl rlas]; }; + lifecontingencies = derive2 { name="lifecontingencies"; version="1.2.3"; sha256="1gkvrzcmcic3rzbcfp5lif4zfc94bhfm36i3ajzaczwjhg2dwivs"; depends=[markovchain Rcpp]; }; + lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; - liftr = derive2 { name="liftr"; version="0.3"; sha256="0piy10syyli14xd71ynlxxsdfhs7i531kymvw2psz0ridv7ang1j"; depends=[knitr rmarkdown stringr yaml]; }; - lightsout = derive2 { name="lightsout"; version="0.2.1"; sha256="12249kjfmrybwq7s3biai0f2pcv30556a4w9q63drm4aqpc6v5q8"; depends=[magrittr shiny shinyjs]; }; - likeLTD = derive2 { name="likeLTD"; version="6.0.4"; sha256="1czwcr5d8i1xwll92m4302fjm76w6ss9b0ndpjm5vwk1492h285a"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; + liftLRD = derive2 { name="liftLRD"; version="1.0-5"; sha256="0v0aczf9s3vr9kk7n6z9spwc82hf418v9vjiyfri3npn3ib112b7"; depends=[adlift nlt]; }; + liftr = derive2 { name="liftr"; version="0.4"; sha256="10r29z9p83cmvgwrcwbb3ws8ayvjmvqgvx83ppa9p01rgw6n9jwq"; depends=[knitr rmarkdown stringr yaml]; }; + lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; + likeLTD = derive2 { name="likeLTD"; version="6.1.1"; sha256="0yf0lnzarl6hgs21l6acjcz40dsw269pagxkfcl5fqpkb53rnqgq"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; - likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.40"; sha256="1zgqs9pcsb45s414kqbhvsb9cxag0imla682981lqvrbli13p2kg"; depends=[alabama cond nleqslv pracma Rsolnp]; }; - likert = derive2 { name="likert"; version="1.3.3"; sha256="0vdm0ggki9lyxm7b477v1ja23d73p7iys3as98vjwymgkakrbb8b"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; - limSolve = derive2 { name="limSolve"; version="1.5.5.1"; sha256="0anrbhw07mird9fj96x1p0gynjnjcj07gpwlq0ffjlqq2qmkzgqs"; depends=[lpSolve MASS quadprog]; }; + likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.45"; sha256="0sl0q6w49l89i6s80scsr5lrr8jgdd0788i4b87w985zaxjqrh03"; depends=[alabama cond nleqslv pracma Rsolnp]; }; + likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; + limSolve = derive2 { name="limSolve"; version="1.5.5.2"; sha256="01vc6as0mr6fmz8vzlnziv4sy302amwwvn7nsnmfrhslqyps4vx1"; depends=[lpSolve MASS quadprog]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; linERR = derive2 { name="linERR"; version="1.0"; sha256="1mhiyqfpwagg161ncp5ndd22hlh12qzr360nms13rgyd8a077cq7"; depends=[survival]; }; linLIR = derive2 { name="linLIR"; version="1.1"; sha256="1v5bwki5j567x2kndfd5nli5i093a33in31025h9hsvkbal1dxgp"; depends=[]; }; linbin = derive2 { name="linbin"; version="0.1.1"; sha256="0i99j7n1hxvnm2605b2xr4mxpib64abr10wp03nxii16nssvv66m"; depends=[]; }; + linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; lineup = derive2 { name="lineup"; version="0.37-6"; sha256="1xyvw00lwnx7j3cgk4aw69lam6ndjxx3wj14h4jpx1xn8l3w7652"; depends=[class qtl]; }; - linkR = derive2 { name="linkR"; version="1.0.1"; sha256="0ayscl0i4flh31l5j8730h5lpqi30p8f2l3nvbd3i2mhp54gpcdx"; depends=[svgViewR]; }; + lingtypology = derive2 { name="lingtypology"; version="1.0.1"; sha256="1k56x651c84sc60fmz1yf0x5436dnh6v3vxh8yq9hk5qpmkgz8h9"; depends=[leaflet magrittr rowr stringdist]; }; + link2GI = derive2 { name="link2GI"; version="0.1-0"; sha256="1i16yf387izv8vn0z8f7wgk02hld83lhfb5c263mn1v3q5zj9kki"; depends=[gdalUtils raster rgdal rgrass7 sf sp]; }; + linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; linprog = derive2 { name="linprog"; version="0.9-2"; sha256="1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"; depends=[lpSolve]; }; - lint = derive2 { name="lint"; version="0.3"; sha256="0lkrn5nsizyixhdp5njxgrgwmygwr663jxv5k9a22a63x1qbwpiq"; depends=[dostats foreach harvestr plyr stringr]; }; lintools = derive2 { name="lintools"; version="0.1.1.1"; sha256="1rsya48abvr5zijd10bh5g03hjviyack2gh0waawqhv29lhiy9f1"; depends=[]; }; - lintr = derive2 { name="lintr"; version="0.3.3"; sha256="04h05y678xx65sd3cx23yzkdmghk47ikg52w4ii110jjq0s53p9d"; depends=[codetools crayon digest httr igraph jsonlite knitr rex rstudioapi stringdist testthat]; }; + lintr = derive2 { name="lintr"; version="1.0.0"; sha256="0d03lwr96pdvkdxgjlrzj591dkaxm2rbdk2n3jgr1k428v6jkzy0"; depends=[codetools crayon digest httr igraph jsonlite knitr rex rstudioapi stringdist testthat]; }; + liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; lira = derive2 { name="lira"; version="1.2.0"; sha256="1n4vjq5v0qj26bq56w5vchwdv10ysc94aizblwm1wl9ss8lpsc0a"; depends=[coda rjags]; }; liso = derive2 { name="liso"; version="0.2"; sha256="072l7ac1fbkh8baiiwx2psiv1sd7h8ggmgk5xkzml069ihhldj5i"; depends=[Iso MASS]; }; lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; }; lisrelToR = derive2 { name="lisrelToR"; version="0.1.4"; sha256="0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5"; depends=[]; }; - list = derive2 { name="list"; version="8.0"; sha256="09qpcsygs2clbgd42v6klgh1vjhv64s56ixxqlcpg9v7xqnms56j"; depends=[coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; }; - listWithDefaults = derive2 { name="listWithDefaults"; version="1.0.0"; sha256="1l7q5v7nf2z1six66lvqflnc77q0f7n1acdbmla695myv246aj6d"; depends=[assertthat]; }; + list = derive2 { name="list"; version="8.3"; sha256="1wffh7xmhdf4hqbpz4ij0759zk0y0zsm160kzfcr2n8s9wdgm5gj"; depends=[coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; }; + listWithDefaults = derive2 { name="listWithDefaults"; version="1.1.0"; sha256="1fbip2rs82l4s85ag147clkwb5spwr07dyh2c7n6vw1i4h1w0v5x"; depends=[assertthat]; }; + listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.6.0"; sha256="0kyq90mf7wv9qgw3s81iv0b8ah0ncc5kv15r7fv6ggdq4f0z0dx7"; depends=[]; }; - littler = derive2 { name="littler"; version="0.3.0"; sha256="1n3kmfl4kazab0yxwgdri24179w6pbkx96pgn8j3alj6ixrn5wdy"; depends=[]; }; + listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; + listviewer = derive2 { name="listviewer"; version="1.4.0"; sha256="1273vk8pk393ciwahvpmdh9z4xdlhw3a7mlm7jsqxqnsrc6jrz3x"; depends=[htmltools htmlwidgets shiny]; }; + liteq = derive2 { name="liteq"; version="1.0.0"; sha256="1r3rbn0a5nnwrhfdygn1hlvv0n3nd1ayddvkpdv5ibsp5fl5vjhy"; depends=[assertthat DBI rappdirs RSQLite]; }; + littler = derive2 { name="littler"; version="0.3.2"; sha256="0anwlxyj82xgrccb3pf6glrkqbkw1871hj4b1qrkmd5ss2f3xq9j"; depends=[]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; + ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; llama = derive2 { name="llama"; version="0.9.1"; sha256="1cvm58kivjw77a2fy1jwsajzl1d0i3i123p6glpwdlqn6rlharck"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; lle = derive2 { name="lle"; version="1.1"; sha256="09wq7mzw48czp5k0b4ij399cflc1jz876fqv0mfvlrydc9igmjhk"; depends=[MASS scatterplot3d snowfall]; }; lllcrc = derive2 { name="lllcrc"; version="1.2"; sha256="06n1fcd3g3z5rl2cyx8jhyscq9fb52mmh0cxg81cnbmai3sliccb"; depends=[combinat data_table plyr VGAM]; }; lm_beta = derive2 { name="lm.beta"; version="1.5-1"; sha256="0p224y9pm72brbcq8y1agkcwc82j7clsnszqzl1qsc0gw0bx9id3"; depends=[]; }; lm_br = derive2 { name="lm.br"; version="2.8"; sha256="019j0ypl4cdnl29r9x17m62jnpp1p174zmy3zdy8bvp52kz4008r"; depends=[Rcpp]; }; - lmSupport = derive2 { name="lmSupport"; version="2.9.2"; sha256="0mdl5ih7zzxynawxx4prh08nq451x74bfw4ga7cygl2ahi6vqq50"; depends=[AICcmodavg car gvlma lme4 psych]; }; - lme4 = derive2 { name="lme4"; version="1.1-11"; sha256="1ji3nkw46ryr8gsam5fbwfbc0pf9s224yfzrs11yb91i89jza93r"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; + lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; + lmSupport = derive2 { name="lmSupport"; version="2.9.8"; sha256="1g96540krrvycy7m3avhwazkmnyngk9lrjggny4wxhzn49i8p4ga"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; + lme4 = derive2 { name="lme4"; version="1.1-12"; sha256="0j60l5kgx1wvw2wm3jwfqwi63hammaq8gfcxzwa4h552likvaxi9"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; lmeVarComp = derive2 { name="lmeVarComp"; version="1.0"; sha256="17zrl33h4lcd8lpdv3d12h5afj8nxr2lyw6699zq4fds2chbq66l"; depends=[]; }; lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; }; - lmenssp = derive2 { name="lmenssp"; version="1.1"; sha256="1s0v5fmzmiq271d3x8l83ni7rl7ikw40mqwhhd2xh21a3nrcdw6l"; depends=[geoR MASS mvtnorm nlme]; }; - lmerTest = derive2 { name="lmerTest"; version="2.0-30"; sha256="16kxk8wiad5w5x81jlr2v6422b5wyi2ay4bkl8s2vq3szrbxl3k9"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; }; + lmem_gwaser = derive2 { name="lmem.gwaser"; version="0.1.0"; sha256="0i315plqq1c8d7nvzk7jj9b3n4pgy27673pgdbii4c5bccwm12vn"; depends=[fdrtool genetics lattice LDheatmap lme4 pastecs qtl stringr]; }; + lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; + lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; }; + lmerTest = derive2 { name="lmerTest"; version="2.0-33"; sha256="1r4bwxq36hn41hwjph2nrn4jhh0y2kwc746374ng5jd480gkgl8m"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; }; + lmeresampler = derive2 { name="lmeresampler"; version="0.1.0"; sha256="00v3qg5vyjjb0pcbrknzxy80kkwsypkhwkv3nsck5rscaf86y3aq"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; - lmfor = derive2 { name="lmfor"; version="1.1"; sha256="0bbcgpcx0xjla128w80xlxp6i6hnrk4wjwqih66zvyjaf5sz7wx9"; depends=[MASS nlme]; }; + lmfor = derive2 { name="lmfor"; version="1.2"; sha256="1lad1sfrf6lsksix4nn2c2dc5fx0rfm4kdhvbmqf9dc55f98rla8"; depends=[MASS nlme]; }; lmm = derive2 { name="lmm"; version="1.0"; sha256="0x5ikb1db99dsn476mf4253dlznlxa1cwnykg1nwnm2vy5qym2fq"; depends=[]; }; lmmlasso = derive2 { name="lmmlasso"; version="0.1-2"; sha256="1mvd38k9npyc05a2x7z0908qz9x4srqgzq9yjyyggplqfrl4dgsz"; depends=[emulator miscTools penalized]; }; lmmot = derive2 { name="lmmot"; version="0.1.3"; sha256="1wpqcyscbqv9l8kl4lg5xg6cs3vc496jwpyj5y4iqmks88hgi6il"; depends=[MASS maxLik]; }; @@ -5201,87 +6495,96 @@ in with self; { lmodel2 = derive2 { name="lmodel2"; version="1.7-2"; sha256="0dyzxflr82k7ns824zlycj502jx3qmgrck125im2k2da34ir3m3q"; depends=[]; }; lmom = derive2 { name="lmom"; version="2.5"; sha256="0s2x8k6p71hxdqggy8ajk7p9p040b9xr3lm49g31z3kcsmzvk23q"; depends=[]; }; lmomRFA = derive2 { name="lmomRFA"; version="3.0-1"; sha256="0lf8n6bhdv3px6p60smghvmwsbgawvjrmgy2dfhs517n67pxg30i"; depends=[lmom]; }; - lmomco = derive2 { name="lmomco"; version="2.2.2"; sha256="1ha77bvd7gb6150mkah62v2vgazifj8as19ry4ivm0kdzlbxc0jz"; depends=[Lmoments MASS]; }; - lmtest = derive2 { name="lmtest"; version="0.9-34"; sha256="0bhdfwrrwjkmlw0wwx7rh6lhdjp68p7db5zfzginnv3dxmksvvl6"; depends=[zoo]; }; + lmomco = derive2 { name="lmomco"; version="2.2.5"; sha256="0xk114vc9pz0f2nfzfyh43idz0hrn0w4g1j3kidlqhnd96g576vs"; depends=[goftest Lmoments MASS]; }; + lmridge = derive2 { name="lmridge"; version="1.0"; sha256="07zchmdcyz8agrs9q2ydcgicz3sxg893vv4rsynlpgyk2z5xnnjf"; depends=[]; }; + lmtest = derive2 { name="lmtest"; version="0.9-35"; sha256="107br1l7p52wxvazs031f4h5ryply97qywg9dzrkw4ydnvqq4j9g"; depends=[zoo]; }; + lmvar = derive2 { name="lmvar"; version="1.0.0"; sha256="03j7ix7f0n4jlrvffs37mrjvl1bbz2q0cqc1qaqpk1davmxc1vfi"; depends=[Matrix matrixcalc nleqslv]; }; loa = derive2 { name="loa"; version="0.2.38"; sha256="1k57n3j8nh0frgabhb5gh0scmgp5gzn2zc9l206mklbw06jkdp96"; depends=[lattice MASS mgcv png RColorBrewer RgoogleMaps]; }; localdepth = derive2 { name="localdepth"; version="0.5-7"; sha256="0h0y74xnhdqa7y51ljmpz7ayznppvy2ll06wfds6200lb9cxgr7k"; depends=[circular]; }; - localgauss = derive2 { name="localgauss"; version="0.35"; sha256="1b8zx2kv1yyazw1sq0c91q11mk3pc7ig2q93qm6lv75nlakyp7da"; depends=[foreach ggplot2 MASS matrixStats]; }; + localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; }; locfdr = derive2 { name="locfdr"; version="1.1-8"; sha256="1falkbp2xz07am8jlhwlvyqvxnli4nwl188kd0g58vdfjcjy3mj2"; depends=[]; }; locfit = derive2 { name="locfit"; version="1.5-9.1"; sha256="0lafrmq1q7x026m92h01hc9cjjiximqqi3v1g2hw7ai9vf7i897m"; depends=[lattice]; }; - locits = derive2 { name="locits"; version="1.4"; sha256="1q9vsf5h4n7r4gy1dwdhfyq3n0rn33akb3nx6yzinncj4w4cqq0h"; depends=[igraph wavethresh]; }; + locits = derive2 { name="locits"; version="1.7.3"; sha256="0sjnwqiqwzdkglvbdxbkg17gjp0vyqvywsy0qq7adxj5hh0yah05"; depends=[igraph wavethresh]; }; locpol = derive2 { name="locpol"; version="0.6-0"; sha256="1zpdh3g7yx3rcn3rhlc3dm19c4b9kx2k8wy8vkwh744a1kysvdga"; depends=[]; }; lodGWAS = derive2 { name="lodGWAS"; version="1.0-7"; sha256="0g5b44d3wb5hnx5l2n76myb1pc9ml3a052n1a4gvgqapa5as35s2"; depends=[rms survival]; }; + loe = derive2 { name="loe"; version="1.1"; sha256="1n16pgfxg9vcn729xxjbbvavg2ywbdcch9v2ph8nv3z7psc0q46c"; depends=[MASS]; }; log4r = derive2 { name="log4r"; version="0.2"; sha256="07q8m7z2sxm6n25a62invf76qakxdsijfh3272spc8xrmdmyw6rj"; depends=[]; }; - logbin = derive2 { name="logbin"; version="1.2"; sha256="1jfkg5rx51hm2skwwafqiw6ajdijdm0cniral3j5flidinsbsbcm"; depends=[glm2]; }; + logbin = derive2 { name="logbin"; version="2.0.1"; sha256="13fxq3lslsmial52ih80ziagbkm00a8681dnnn3s8kykqg1m8v7f"; depends=[glm2 turboEM]; }; logconPH = derive2 { name="logconPH"; version="1.5"; sha256="05fkibgh5nzs8c4f39kzg4zyh2dfhg1k69hlx7l8p442snajsg92"; depends=[]; }; logconcens = derive2 { name="logconcens"; version="0.16-4"; sha256="11bk03kjlb747g54axmb0nayz226g41xvanbw79aij76vjbglv7y"; depends=[]; }; - logcondens = derive2 { name="logcondens"; version="2.1.4"; sha256="0y1x0bvalrhrl329l9a0mssc8kc060ml2hgz18qyw3chd24x3dmz"; depends=[ks]; }; + logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; logging = derive2 { name="logging"; version="0.7-103"; sha256="1sp7q217awizb6l8c9p5dix6skpq8j7w8i088x4mm0fc0qr1ba5c"; depends=[]; }; - logistf = derive2 { name="logistf"; version="1.21"; sha256="0cwbmd0mvj4wywpx7p4lhs70nhab7bfl6fzz2c4snn3ma6sy7x8c"; depends=[mgcv mice]; }; + logistf = derive2 { name="logistf"; version="1.22"; sha256="0npwqbl8rfvn6w2y0qpkckj44mvjjccj0cn9axp2wcs03cmz0rp8"; depends=[mgcv mice]; }; logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; }; logitchoice = derive2 { name="logitchoice"; version="0.9.4"; sha256="1vkw7cwp7nwrsj9ifn4gz21zbw9da5rph9lr3w466zxkzdkbldqj"; depends=[]; }; - logitnorm = derive2 { name="logitnorm"; version="0.8.29"; sha256="0wbdxh3n44nzb6c0ahyd8gndfql1y56fns2bkmzqi3nxy9blhx18"; depends=[]; }; + logitnorm = derive2 { name="logitnorm"; version="0.8.33"; sha256="1arsgc57vr77m9ygy0rbqkayj587k9k5k8nrr6k30v63qapc2irv"; depends=[]; }; loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; logmult = derive2 { name="logmult"; version="0.6.3"; sha256="05vxvi9zf2araxfng7gibak9g8m6vwmp7aclddpd814lxzmsmf8a"; depends=[gnm qvcalc]; }; logspline = derive2 { name="logspline"; version="2.1.9"; sha256="1kd7ricaxbcjl6d9hx7bb5mlkr7x2h7gc8vrmfvlzxppbcghb6vw"; depends=[]; }; - lokern = derive2 { name="lokern"; version="1.1-6"; sha256="0iixxs23zsb0qadppcwmwf6vbxcjnm8zmwyz1xkkmhrpp06sa3jw"; depends=[sfsmisc]; }; + lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; }; lomb = derive2 { name="lomb"; version="1.0"; sha256="06lbk7s1ilqx6xsgj628wzdwmnvbs0p03hdpx8665fhddcxh3ryy"; depends=[]; }; - longCatEDA = derive2 { name="longCatEDA"; version="0.17"; sha256="1yb0117ycj4079590mrx3lg9m5k7xd1dhb779r3rmnww94pmvja9"; depends=[]; }; + longCatEDA = derive2 { name="longCatEDA"; version="0.30"; sha256="1xj1lfwnsl864c0wycpwg8ibns6447l5988132p79a2rpd30rw3r"; depends=[]; }; longclust = derive2 { name="longclust"; version="1.2"; sha256="1m270fyvfz0w19p9xdv7ihy19nhrhjq2akymbp774073crznmmw0"; depends=[]; }; longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; longmemo = derive2 { name="longmemo"; version="1.0-0"; sha256="1jnck5nfwxywj74awl4s9i9jn431655mmi85g0nfbg4y71aprzdc"; depends=[]; }; - longpower = derive2 { name="longpower"; version="1.0-11"; sha256="1l1icy653d67wlvigcya8glhqh2746cr1vh1khx36qjhfjz6wgyf"; depends=[lme4 Matrix nlme]; }; - longurl = derive2 { name="longurl"; version="0.1.1"; sha256="06xyxn641nsw3zl2mllsvm1r4g82ddnc3vvscp6bdw8l7a13w4a5"; depends=[dplyr httr pbapply]; }; - loo = derive2 { name="loo"; version="0.1.5"; sha256="0d5lnc8a9939g3mvh28ymvsabgfkq9fqljskvqj5v9rb4ps1b9xd"; depends=[matrixStats]; }; + longpower = derive2 { name="longpower"; version="1.0-16"; sha256="0hbv43y0fgbv1qiczy4kibqc7pk7whrz4kyxshg8730y8g9wyxdi"; depends=[lme4 nlme]; }; + longurl = derive2 { name="longurl"; version="0.3.0"; sha256="0ysa70zlkk3ybddj3yd3vbhjnkjbrisiz5a2hgbjx10p33m1r3am"; depends=[dplyr httr purrr]; }; + loo = derive2 { name="loo"; version="1.0.0"; sha256="1c4knrcfc3r2yg9623lryfbndrv3fbz2ksascmi5wgik3fz44w01"; depends=[matrixStats]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; loopr = derive2 { name="loopr"; version="1.0.1"; sha256="1qzfjv15ymk8mnvb556g2bfk64jpl0qcvh4bm3wihplr1whrwq6y"; depends=[dplyr lazyeval magrittr plyr R6]; }; lordif = derive2 { name="lordif"; version="0.3-3"; sha256="1yby9fvzdi1dzvzp6d6h144k1p9nfacd8l5bd66dmhnc8sp2nlx5"; depends=[mirt rms]; }; lorec = derive2 { name="lorec"; version="0.6.1"; sha256="0mgypd8awixh1lzbh5559br4k7vi3pfmwniqhgh68wc06sc6bn65"; depends=[]; }; + lowmemtkmeans = derive2 { name="lowmemtkmeans"; version="0.1.2"; sha256="08zhdw48rzw47yzhg4s37bkliyngxs46cyb57dvng1s3m0w0dhvi"; depends=[Rcpp RcppArmadillo]; }; lpSolve = derive2 { name="lpSolve"; version="5.6.13"; sha256="13a9ry8xf5j1f2j6imqrxdgxqz3nqp9sj9b4ivyx9sid459irm6m"; depends=[]; }; lpSolveAPI = derive2 { name="lpSolveAPI"; version="5.5.2.0-17"; sha256="1gfxnjkhhyybhyg29qdrdqzwq569b6pgwjgacmw3q7aldc724cyz"; depends=[]; }; lpbrim = derive2 { name="lpbrim"; version="1.0.0"; sha256="1cbkzl23vgs9hf83ggkcnkmxvvj8867k5b9vhfdrznpqyqv1f2gp"; depends=[Matrix plyr RColorBrewer]; }; lpc = derive2 { name="lpc"; version="1.0.2"; sha256="1r6ynkhqjic1m7fqrqsp7f8rpxqih5idn4j96fqrdj8nj01znv29"; depends=[]; }; lpint = derive2 { name="lpint"; version="2.0"; sha256="0p1np8wlfbax0c7ysc5fs9dai8s00h1v0gan89dbd6bx06307w2r"; depends=[]; }; + lplyr = derive2 { name="lplyr"; version="0.1.6"; sha256="1a7wry5v78z4aij7ii64340ycx30wqbm3x2wllka79gkll1fn78h"; depends=[bazar dplyr lazyeval magrittr]; }; lpme = derive2 { name="lpme"; version="1.0.1"; sha256="0f0xphlxl0ma3s2miadl74cb1l20cikqgk3nc1dg5ml05cqzhyxr"; depends=[Rcpp RcppArmadillo]; }; lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; lpridge = derive2 { name="lpridge"; version="1.0-7"; sha256="0nkl70fwzra308bzlhjfpkxr8hpd8v1xdnah7nscxa10qlisgr2k"; depends=[]; }; lqa = derive2 { name="lqa"; version="1.0-3"; sha256="141r2cd9kybi6n9jbdsvhza8jdxxqch4z3qizvpazjy8qifng29q"; depends=[]; }; lqmm = derive2 { name="lqmm"; version="1.5.3"; sha256="1gl609irhxk7qi4x8as2xylc6iybm9jyrnm7dvb92nxl0ksp44v7"; depends=[nlme SparseGrid]; }; - lqr = derive2 { name="lqr"; version="1.1"; sha256="1ljxvq6vbqzb8p6krv0k2d4fjv7y0l7m5dvbzw6rg82zfa66mlhk"; depends=[ghyp spatstat]; }; + lqr = derive2 { name="lqr"; version="1.5"; sha256="1rcs6p8jx86r40ys8qiz5gynkfqyg3lkv7wsv551w9c5m3s1z2gy"; depends=[ghyp spatstat]; }; lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; }; - lrgs = derive2 { name="lrgs"; version="0.4.2"; sha256="04blq49sxc0shny0yfv19az66k8xb8bwdqznqajzr3cbsnpvh5bk"; depends=[mvtnorm]; }; - lrmest = derive2 { name="lrmest"; version="1.0"; sha256="1gdj8pmmzvs1li05pwhad63blhibq45xd1acajxsx06k7k21ajs7"; depends=[MASS]; }; + lrgs = derive2 { name="lrgs"; version="0.5.1"; sha256="1hzcmrvax03bzrljnqskmnnpsw6amnwcfygnls727369h0dbzc4a"; depends=[mvtnorm]; }; + lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; }; lsa = derive2 { name="lsa"; version="0.73.1"; sha256="1af8s32hkri1hpngl9skd6s5x6vb8nqzgnkv0s38yvgsja4xm1g5"; depends=[SnowballC]; }; lsbclust = derive2 { name="lsbclust"; version="1.0.4"; sha256="0a0l1vvr4gp1vvqccjicy4qh7l2kwyh7k503yi403d0987zqywcc"; depends=[clue ggplot2 gridExtra plyr Rcpp reshape2]; }; lsdv = derive2 { name="lsdv"; version="1.1"; sha256="0rl1xszr9r8v71j98gjpav30n2ncsci19hjlc9flzs1s20sb1xpr"; depends=[]; }; lsei = derive2 { name="lsei"; version="1.1-1"; sha256="1akvkccf2cq331agcsi24x3cw73cc8vdl7kw3zjyg8q6lmvq78am"; depends=[]; }; - lsgl = derive2 { name="lsgl"; version="1.2.0"; sha256="18dmm6slf0ilikz9hr3j8p554h5w9jaypfdmva7d2s0mhlv6nx5y"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; + lsgl = derive2 { name="lsgl"; version="1.3.5"; sha256="0afg1n03zl00b0w87j4v8afp1q6h5d8kx8xgciy52dki4yvb1c3r"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; - lsl = derive2 { name="lsl"; version="0.5.1"; sha256="0y6lqmjiah33j66hxwxx9b6qx42sv0bqqgic39nkil1zppkk3b4h"; depends=[ggplot2 reshape2]; }; - lsmeans = derive2 { name="lsmeans"; version="2.23"; sha256="0f3i2415nd6s80lcw0cbksz2g360ws6yvvc0c3rw47z95zi599fj"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; }; + lsl = derive2 { name="lsl"; version="0.5.5"; sha256="0555za3yqqdbcpxrl6vzj494784xl1wsmwp1apszaqncz2vwc9pg"; depends=[ggplot2 lavaan reshape2]; }; + lsmeans = derive2 { name="lsmeans"; version="2.25"; sha256="0akz77f4fhkarjf3nn4y3nfh1xflxjzj4jxaw4c7l4dhia7pji30"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; }; lspls = derive2 { name="lspls"; version="0.2-1"; sha256="1g27fqhnx9db0zrxbhqr76agvxy8a5fx1bfy58j2ni76pki1y4rl"; depends=[pls]; }; lsr = derive2 { name="lsr"; version="0.5"; sha256="0q385a3q19i8462lm9fx2bw779n4n8azra5ydrzw59zilprhn03f"; depends=[]; }; lss = derive2 { name="lss"; version="0.52"; sha256="1fvs8p9rhx81xfn450smnd0i1ym06ar6nwwcpl74a66pfi9a5sbp"; depends=[quantreg]; }; - ltbayes = derive2 { name="ltbayes"; version="0.3"; sha256="1b35bwli08yzgv3idg86wz8fzpx7r5sx0ryr950rdh0n2jdml09q"; depends=[mcmc MHadaptive numDeriv]; }; + ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.0-0"; sha256="1igkgb0jy3mzlnp9s6avhcpplwijz5g3x26a3lavyy3d9fjpmfpa"; depends=[MASS msm polycor]; }; - ltmle = derive2 { name="ltmle"; version="0.9-7"; sha256="18nybicfy7sp4rvnyckd9wgsb4hqsgmwijh2id9d6kyvkcinxaw2"; depends=[Matrix]; }; + ltmle = derive2 { name="ltmle"; version="0.9-9"; sha256="1fnlnj6r1pvisgain1wvv0yb69wckz31lbxyfvw2xxq6c658ifn8"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; ltsk = derive2 { name="ltsk"; version="1.0.4"; sha256="1p026ryq31iw7d8mbi4m2q43g5frj47387w8g46j50bcv11hh2zm"; depends=[fields gstat sp]; }; - lubridate = derive2 { name="lubridate"; version="1.5.0"; sha256="12x286z8m4rqwvsf0gkbkyzw2znj560xsxbczfz9qxz7k26jp640"; depends=[stringr]; }; + ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; + lubridate = derive2 { name="lubridate"; version="1.6.0"; sha256="0ci6rwij9i1inn840m0mlh1nqgh6vm2lada9kdnjpcjp5kyfv1qs"; depends=[stringr]; }; luca = derive2 { name="luca"; version="1.0-5"; sha256="1jiqwibkrgga4ahz0qgpfkvrsxjqc55i2nwnm60xddb8hpb6a6qx"; depends=[genetics survival]; }; - lucid = derive2 { name="lucid"; version="1.3"; sha256="018vp4xibxr7aanffcvhmppsh7vjsjrqqc41iavyasjbamj3hyck"; depends=[nlme]; }; - lucr = derive2 { name="lucr"; version="0.1.1"; sha256="0igh1wfdl67yincqj284h6kkpp1d9vmv1a4ljkd98vlshwfyi74f"; depends=[httr Rcpp]; }; + lucid = derive2 { name="lucid"; version="1.4"; sha256="1kwl9h7ynp8nhny51xskrbgc3060bawxjkdijhsjzss2hbbygwds"; depends=[nlme]; }; + lucr = derive2 { name="lucr"; version="0.2.0"; sha256="0v5g72cl9fg3b3ix34bsmjwwqrnm4ivgcd5mm98c5jd8rrz1xkwq"; depends=[httr Rcpp]; }; + ludic = derive2 { name="ludic"; version="0.1.5"; sha256="03ywna9fd2ypwchwx58ccmlxjdnx7zav7pqxwrc5bh3hrfbsxl13"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; lulcc = derive2 { name="lulcc"; version="1.0.1"; sha256="1xq4rjsds9vwj4prkjxfcp9sv53ha9pj65ns0frpbh8grvrjwimv"; depends=[lattice raster rasterVis ROCR]; }; - lumendb = derive2 { name="lumendb"; version="0.2.0"; sha256="0j0bcg0nrp6ckd2vr81jqx9k8q6fsnfpi3n1c5nyjasspb746q2i"; depends=[httr]; }; + lumendb = derive2 { name="lumendb"; version="0.2.1"; sha256="0cmbiiixvf6c33vxzcn4q48asinlsplmc5xpj5h84xnysa6zs3xv"; depends=[httr xml2]; }; lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; }; luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; }; lvm4net = derive2 { name="lvm4net"; version="0.2"; sha256="0al0answp3rngq69bl3ch6ylil22wdp1c047yi5gbga853p7db0c"; depends=[ellipse ergm igraph MASS network]; }; + lvnet = derive2 { name="lvnet"; version="0.3"; sha256="17kp1r6dxajql8b7lzr8s6wv1gqvradbxivz5gnnhdkmx290asaz"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; + lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; }; lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; }; m4fe = derive2 { name="m4fe"; version="0.1"; sha256="06lh45591z2lc6lw91vyn066x0m1zwxxfp6nbirp1rz901v843ph"; depends=[]; }; @@ -5292,162 +6595,216 @@ in with self; { mHG = derive2 { name="mHG"; version="1.0"; sha256="18hj9chp9dy6nmi5w0808nivqbyni117darvdpf03kzq5ym8dlm6"; depends=[]; }; mQTL = derive2 { name="mQTL"; version="1.0"; sha256="0k80xvkr0b0mp3bj2s558fjxi2zf4k7ggnw6hsjm8lr84i108dks"; depends=[MASS outliers qtl]; }; mRMRe = derive2 { name="mRMRe"; version="2.0.5"; sha256="1lhpamjy8dbk3lzjj0wj041cg99rw6925i9fq297c93jxq562414"; depends=[igraph survival]; }; - mRm = derive2 { name="mRm"; version="1.1.5"; sha256="0sbpk7z4ij917nw8wyvnm87iav95ybqrzvmsjy3r8nyq55bjzyn7"; depends=[]; }; - maGUI = derive2 { name="maGUI"; version="1.0"; sha256="0vlaxdq2fw9bpz4wd4ir4gy6pas0hp01xlkbnvwrv297zzhndrr6"; depends=[affy annotate beadarray Biobase BiocInstaller Biostrings convert genefilter GEOmetadb GEOquery globaltest GOstats graph gWidgets gWidgetsRGtk2 impute limma lumi marray oligo pdInfoBuilder RBGL Rgraphviz RGtk2 RSQLite simpleaffy ssize WGCNA]; }; + mRm = derive2 { name="mRm"; version="1.1.6"; sha256="1d897c5xflbkkj25hw15rd62nggv000cv2j481x0lhdgmgldjhrh"; depends=[]; }; + maGUI = derive2 { name="maGUI"; version="2.1"; sha256="16q6hiadqwwm7viz29kn420fi5ca5hx7azgrz0vsvv3bnr0y7aq5"; depends=[affy amap annotate beadarray Biobase BiocInstaller Biostrings Category convert genefilter GEOmetadb GEOquery globaltest GO_db GOstats graph gWidgets gWidgetsRGtk2 impute KEGGgraph KEGGREST limma lumi marray oligo pdInfoBuilder RBGL Rgraphviz RGtk2 RSQLite simpleaffy ssize WGCNA]; }; maRketSim = derive2 { name="maRketSim"; version="0.9.2"; sha256="1cq17zjwyf4i5lcqgxqkw805s4mr6qp89blgpmpxy8gdrbfj93m4"; depends=[]; }; - maSAE = derive2 { name="maSAE"; version="0.1-4"; sha256="0287x5n41hl6p2s9f62zmjq87dklfyvb41fd9q3s1m2sjspgd6vc"; depends=[]; }; + maSAE = derive2 { name="maSAE"; version="0.1-5"; sha256="0v0vlj41j3ddyxv8lld39k1ryrdjin7r6bj13x2agbklb1fd4an1"; depends=[]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; + macc = derive2 { name="macc"; version="1.0.0"; sha256="1d6acnp9k0al4nwggf5dqjiazasnika4899gb5j4rp2aihd8yly9"; depends=[car lme4 MASS nlme optimx]; }; + machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; + machina = derive2 { name="machina"; version="0.1.6"; sha256="009mzqb5jgnilj9b5ldmm5600008bljlqacm8jjxvqsfnfdfg8zv"; depends=[DT httr jsonlite lubridate rhandsontable xts]; }; + macleish = derive2 { name="macleish"; version="0.3.0"; sha256="05zmk28yh54gnm09aps3q64s4igcb629b3zx7giinlfc4xx8qv74"; depends=[DBI dplyr etl lubridate readr]; }; mada = derive2 { name="mada"; version="0.5.7"; sha256="0a2m1rb4d143v9732392xzvbg6x1k3l0g3zscgbx64m21kxshmgb"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; madness = derive2 { name="madness"; version="0.2.0"; sha256="02swq1hzmsdcfjhlmjykd81cyygxfx4add9caj2q2z6xhmfh3rlv"; depends=[expm matrixcalc]; }; - mads = derive2 { name="mads"; version="0.1.3"; sha256="1nq17r9k2wg9v5nis0c0z4qf5pcmw93smxf7lra7vsiqgzgzhaad"; depends=[mrds]; }; - madsim = derive2 { name="madsim"; version="1.1"; sha256="1d9mv769zia43krdfl43hp22cp5mdi3ycwj3kxyfcjrg23bjnyc0"; depends=[]; }; - magclass = derive2 { name="magclass"; version="3.74"; sha256="0ikhh50k4i9d4h36yq0ccps4smqr0igrgxzfy23rg57dwcfzz3yz"; depends=[abind maptools ncdf4 reshape2 sp]; }; + madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; }; + mads = derive2 { name="mads"; version="0.1.5"; sha256="1ac34iff9hvl1bxk3gs5s3i311g9y59nd6v9jhvnfd6wfhck7krs"; depends=[mrds]; }; + madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; }; + mafs = derive2 { name="mafs"; version="0.0.2"; sha256="1yx4y73hnd30x6cad7md07aiikhdsa6bsbha72j9vlncaj8d504m"; depends=[cmprsk colorspace CombMSC Epi etm forecast forecastHybrid fracdiff ggplot2 ggseas gtable munsell numDeriv plyr quadprog Rcpp scales tictoc tidyr timeDate tseries zoo]; }; + magclass = derive2 { name="magclass"; version="3.85"; sha256="1l3s6j19yvyhprxk2817xmgr64xwkknvq53bfhjdbn2jqh5nx40x"; depends=[abind maptools ncdf4 reshape2 sp]; }; magic = derive2 { name="magic"; version="1.5-6"; sha256="1399w1zhz79nj8cdhslybncd9h6rylfhb548nv22ip0dxxdkyv0v"; depends=[abind]; }; - magicaxis = derive2 { name="magicaxis"; version="1.9.4"; sha256="0kgr29q4v9aq10l6zkddgv93zl66yzwxx9jsnskkx3r0kk3rlxa3"; depends=[MASS plotrix sm]; }; + magicaxis = derive2 { name="magicaxis"; version="2.0.0"; sha256="0f531qlwkp043qgwv58x1b07a3v03vnz0r20hlqqsx8z16jqw6i4"; depends=[celestial mapproj MASS plotrix sm]; }; + magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; + magick = derive2 { name="magick"; version="0.3"; sha256="06ljr1avgp0ki9d15rrlcdz6n0m8v5rx07aq3xqa5zmkqgm6s0a5"; depends=[curl Rcpp]; }; + magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; mailR = derive2 { name="mailR"; version="0.4.1"; sha256="1bfh3fxdqx9f9y3fgklxyslpcvhr9gcj7wsamaxzgrcsaxm8fdlw"; depends=[R_utils rJava stringr]; }; + makeFlow = derive2 { name="makeFlow"; version="1.0.2"; sha256="0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw"; depends=[dplyr RColorBrewer]; }; makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; + makedummies = derive2 { name="makedummies"; version="1.0"; sha256="1kyx0n620pnaaxi136f81kr55v94zlw2bikrky1sq9bhrvdlf7yh"; depends=[]; }; + malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; - mangoTraining = derive2 { name="mangoTraining"; version="1.0-6"; sha256="1g5qwc09whrsxlp2wvgx79p5mrjw5jj0q0k1bv08pq31djr7c3r3"; depends=[]; }; - manifestoR = derive2 { name="manifestoR"; version="1.2"; sha256="069nfhafqaqb4amkc40bcqc0qij1nl9h433l97q4vxq55aqr2hz0"; depends=[base64enc dplyr functional httr jsonlite magrittr NLP psych tm zoo]; }; + mangoTraining = derive2 { name="mangoTraining"; version="1.0-7"; sha256="0lw46j44jhdcyh079a7zjmxcnv5c6qsfachinlwv3ild1gwggr3p"; depends=[]; }; + manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; + manifestoR = derive2 { name="manifestoR"; version="1.2.3"; sha256="0m9xgprm7w68ncm7qpqdcnrl409i4x33lrpwzap2za5r5bb5wv1n"; depends=[base64enc dplyr functional httr jsonlite magrittr NLP psych tibble tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; + manipulateWidget = derive2 { name="manipulateWidget"; version="0.5.1"; sha256="1i69y4gjm35xf3nd6bf031nkw91b0whbd7yd2a1fq5msv0mjqrss"; depends=[base64enc htmlwidgets knitr miniUI shiny]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapdata = derive2 { name="mapdata"; version="2.2-6"; sha256="0k3hsnyvax20jph384gca10rl7a9fcglgkqcjsc5hndx3qrwpanv"; depends=[maps]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; - mapmisc = derive2 { name="mapmisc"; version="1.4.6"; sha256="00v7jwjvw942xr1bd05n8i3abbzbcnbjzpm3mxb2sh32s4w1hifj"; depends=[raster sp]; }; + mapmisc = derive2 { name="mapmisc"; version="1.5.0"; sha256="1f6yjr3a26nm482ldnx8rzjhc0d9hlrpd48japm0sihxvmsz0pv3"; depends=[raster sp]; }; mapplots = derive2 { name="mapplots"; version="1.5"; sha256="09sk78a0p8hlwhk3w2dwvpb0a6p7fqdxyskvz32p1lcav7y3jfrb"; depends=[]; }; mapproj = derive2 { name="mapproj"; version="1.2-4"; sha256="1sywwzdikpnkzygb2jx9c67sgrykgbkm39dkf45clz3yylsib2ng"; depends=[maps]; }; - mapr = derive2 { name="mapr"; version="0.2.0"; sha256="1lfi6hrbifp4mfxnqn4qbnicjfnrg9pc73kdrk7hf3dfhgi5269n"; depends=[ggplot2 gistr httr leaflet RColorBrewer rworldmap sp spocc]; }; - maps = derive2 { name="maps"; version="3.1.0"; sha256="16hsw1vzkxm0rhfsryj1zsiywxaa5hn5dbyxvnb42grqgl6wrdkn"; depends=[]; }; - maptools = derive2 { name="maptools"; version="0.8-39"; sha256="1lkxlvk8h9v37cl87r39asm4mhyihllv105izgh7bfsxwh9y70ab"; depends=[foreign lattice sp]; }; + mapr = derive2 { name="mapr"; version="0.3.0"; sha256="0xgbc4zpjdd6lncccdd85ar909z7bv8yqrv5s1xrp2j2j1gv97z1"; depends=[ggplot2 gistr httr leaflet RColorBrewer rworldmap sp spocc]; }; + maps = derive2 { name="maps"; version="3.1.1"; sha256="0ajdrd4z66jpdjqdgk6vz89x7gh1isidgr8qkg0fq6cmrvjn08lp"; depends=[]; }; + maptools = derive2 { name="maptools"; version="0.8-41"; sha256="0niz4qssvd8g43z4a85mq5p7cs3s169sgc3p3rzviqqgcc0i6z7n"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; - mapview = derive2 { name="mapview"; version="1.0.0"; sha256="1kk3slizi78qjnfwnv8jjhwb6x89w7ly11l7fxk4fny3zjzj1spa"; depends=[brew data_table gdalUtils htmltools htmlwidgets lattice latticeExtra leaflet OpenStreetMap png raster rasterVis Rcpp rgdal satellite scales sp]; }; + mapview = derive2 { name="mapview"; version="1.2.0"; sha256="0785jzs3kr6rcxz5p1mwpz7maq3z2mwxskl6whyzizbrkmxj2ikw"; depends=[brew data_table gdalUtils htmltools htmlwidgets lattice latticeExtra leaflet png raster Rcpp rgdal satellite scales sp viridisLite webshot]; }; mar1s = derive2 { name="mar1s"; version="2.1"; sha256="0psjva7nsgar5sj03adjx44pw0sdqnsd96m4g6k8d76pv30m1g7l"; depends=[cmrutils fda zoo]; }; - marelac = derive2 { name="marelac"; version="2.1.5"; sha256="1lzgcl6y4dmy3radzr49smy0cwdbd930dvah9rs50x637yqc7p14"; depends=[seacarb shape]; }; + march = derive2 { name="march"; version="1.4"; sha256="1wfhm33k2j5yim56sg0wd02ypfhlp9fc138vmdsdjp6nh4y23hnj"; depends=[]; }; + marelac = derive2 { name="marelac"; version="2.1.6"; sha256="024gbrdby6h722j58wl8xn8027sanlpnz1l3hhxnllwzbz3mbdz4"; depends=[seacarb shape]; }; marg = derive2 { name="marg"; version="1.2-2"; sha256="0j08zzcrj8nqsargi6xi50gy9pl4smmsp4b7ywlga7r1ga38g82r"; depends=[statmod survival]; }; + marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; + marinespeed = derive2 { name="marinespeed"; version="0.1.0"; sha256="1r9bpggb88px8149dsga3xmkjhjq6ybs6a5kp60qz28iyr183mar"; depends=[bit geosphere sp]; }; markdown = derive2 { name="markdown"; version="0.7.7"; sha256="00j1hlib3il50azs2vlcyhi0bjpx1r50mxr9w9dl5g1bwjjc71hb"; depends=[mime]; }; - marked = derive2 { name="marked"; version="1.1.11"; sha256="12wh8djc0j7x4ywn7x57f93wyl05p6yv7808g6s5pn2v5j0v66q6"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp truncnorm]; }; - markmyassignment = derive2 { name="markmyassignment"; version="0.5.0"; sha256="17xw5hn0bg1w7vbs8d8kr6y0drrmkmpwfvr6dy3zndagzsb2sdw0"; depends=[codetools httr testthat yaml]; }; + marked = derive2 { name="marked"; version="1.1.13"; sha256="0zgfd7fdcrvvqnlgzarly16zjnipshxsa1g3j9jqc5kbqvh7fnh2"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; + markmyassignment = derive2 { name="markmyassignment"; version="0.6.1"; sha256="167q4fwn2ssqn588wx3ig923rcr74m95na1z1wdfy67jczsk492l"; depends=[codetools httr lazyeval testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.4"; sha256="12np5rg59wjyh1mfhhfh115ziciba973fjvbrhn4qzdnry1mwbdb"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; - markovchain = derive2 { name="markovchain"; version="0.4.3.1"; sha256="0ik8wkg8cj6z5ys3lm15jkslsxq2j2ahzw2nc7q0qrvgzbmfck6w"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; + markovchain = derive2 { name="markovchain"; version="0.6.6"; sha256="165zh185fjgr61ah4y763816fai6g6phj64afdlklbsj5an1mvr9"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; - marmap = derive2 { name="marmap"; version="0.9.5"; sha256="0avdi55b43nrkryygs7g3l62g48m1b2zhjf7xcwx7q166k7lb7ax"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; + marmap = derive2 { name="marmap"; version="0.9.6"; sha256="1b0mpygk18ri0xs9f56j2g7zmka7krnw7fmh9m9xisbvq2g23g92"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; marqLevAlg = derive2 { name="marqLevAlg"; version="1.1"; sha256="1wmqi68g0flrlmj87vwgvyxap0miss0n42qiiw7ypyj4jw9kwm8j"; depends=[]; }; + mason = derive2 { name="mason"; version="0.2.5"; sha256="1v2gja8kbwzx5c8y8gchh4rwwprv99ad0nhgb0hnfgjnqsbdmdv7"; depends=[assertive broom dplyr lazyeval magrittr tidyr]; }; matR = derive2 { name="matR"; version="0.9"; sha256="0lih3g2z6rxykprl3s529xcf466bpzpsv4l20dkgx1fgfslfcl2p"; depends=[BIOM_utils MGRASTer]; }; - matchingMarkets = derive2 { name="matchingMarkets"; version="0.2-1"; sha256="14y1sigmi3rv8rpvcyc2d7j4dlzr85mhsqrgdjfszxz26rahkx6k"; depends=[lpSolve partitions Rcpp RcppArmadillo RcppProgress]; }; + matchMulti = derive2 { name="matchMulti"; version="1.1.5"; sha256="186ndliw32aqbcpacd1hjsab7dm38sxmgh77iyp203swif1iv6jn"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; + matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-2"; sha256="1kajwh81l4h30szdpg8y5178cswgp89zifh5nsw5480k6n2g6asa"; depends=[partitions Rcpp RcppArmadillo RcppProgress rJava]; }; matchingR = derive2 { name="matchingR"; version="1.2.1"; sha256="09vx3yqaq0pq341v8rm2hjxx0aza0bnh9iffrygwbhls7fi7kn7y"; depends=[Rcpp RcppArmadillo]; }; - matconv = derive2 { name="matconv"; version="0.3.0"; sha256="19b03ks2pqsz7wk3wm7iaj5z5aidsd6hn0s0x46r2iv13x67fjkd"; depends=[]; }; - mateable = derive2 { name="mateable"; version="0.3.0"; sha256="0jbdfijf9iq5ik5pri0iricip9hglp75jask65iyf1k8n82hippb"; depends=[FNN Rcpp sn]; }; + matconv = derive2 { name="matconv"; version="0.3.2"; sha256="0vnmqz5vzv5n0cfpgr30gkl0pv8p2b5cp3ap6mn01sxd671lx38z"; depends=[]; }; + mateable = derive2 { name="mateable"; version="0.3.1"; sha256="1ka9xxicibpfg6k3njq5f5576jwj734r1mb46a2cmiyq676ks7pp"; depends=[FNN Rcpp sn]; }; mathgraph = derive2 { name="mathgraph"; version="0.9-11"; sha256="0xikgzn24p0qqlrmaydmjk5yz5pq2rilsvpx86n3p2k2fc3wpwjy"; depends=[]; }; matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; - matlabr = derive2 { name="matlabr"; version="1.1"; sha256="0h9h805569dxnrrzgmxmhvmx7l8kg53lq1nksdrr7p9f8jglha6s"; depends=[stringr]; }; - matlib = derive2 { name="matlib"; version="0.7.2"; sha256="1832i9c9cp2klblwf6wbpigpzsnlli912dzkabjp5zlzkngbfym5"; depends=[rgl]; }; + matlabr = derive2 { name="matlabr"; version="1.1.3"; sha256="0kbfvc83ccyg3dzviz0xz2jn7n3zcjlp4g3qwi623b5f2pvw7qq4"; depends=[stringr]; }; + matlib = derive2 { name="matlib"; version="0.8.1"; sha256="080mbmr1lb5ha5ql40hv0idcnnbyaai46c42z756kdyq9pdzcabf"; depends=[car rgl]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; - matrixStats = derive2 { name="matrixStats"; version="0.50.1"; sha256="08l32abp7dfnsc49ca4hzznh934y60n5z01x5ga2ixky5961s57c"; depends=[]; }; + matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; + matrixStats = derive2 { name="matrixStats"; version="0.51.0"; sha256="0bsalx605kgb9nl7mfnq1qinkyd9s97p8plymsyfja1gmcnjrcpj"; depends=[]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; - matrixpls = derive2 { name="matrixpls"; version="0.7.0"; sha256="1bzgw5lghi3q9qgjcs87w2b0slvxy4cppr9p378p44hqzf00na4h"; depends=[assertive lavaan MASS matrixcalc psych]; }; + matrixpls = derive2 { name="matrixpls"; version="1.0.4"; sha256="1pysvf224wpkawdvz3y38cy8s3lg34s37ip6ybzfxm4vanzj1xjc"; depends=[assertive lavaan MASS matrixcalc psych]; }; maxLik = derive2 { name="maxLik"; version="1.3-4"; sha256="0jjb5kc7dvx940ybg7b7z9di79v75zm2xlb0kj2y7rmi45vvh6hq"; depends=[miscTools sandwich]; }; maxent = derive2 { name="maxent"; version="1.3.3.1"; sha256="1skc7d0p6kg0gi1bpgaqn2dmxjzbvcphx5x3idpscxfbplm5v96p"; depends=[Rcpp SparseM tm]; }; - maxlike = derive2 { name="maxlike"; version="0.1-5"; sha256="0h544wr7qsyb70vmbk648hfyb6arrsb41gw39svcin412rhw9k9j"; depends=[raster]; }; - maxstat = derive2 { name="maxstat"; version="0.7-23"; sha256="1dp2gp0zsf3l5vd43ixxx7039ybcw84x9zf526pk1p2j7pxwsbay"; depends=[exactRankTests mvtnorm]; }; - mbbefd = derive2 { name="mbbefd"; version="0.8-0"; sha256="1vpbclkbfw8cas4474sbmnnvab3vrqivmgby95prm40p3xdy9xl4"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; + maxlike = derive2 { name="maxlike"; version="0.1-7"; sha256="0gi33hcjj456sjw7l3q4n46k4cb6m3ml3ycd93pnajxacl24swbb"; depends=[raster]; }; + maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; + maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; + maxstat = derive2 { name="maxstat"; version="0.7-24"; sha256="1l7q83233jbxsly081mnc7lf20nn894hcynq3sm3hjxkvrplzsm9"; depends=[exactRankTests mvtnorm]; }; + mazeGen = derive2 { name="mazeGen"; version="0.1.1"; sha256="1vqhcypxbw15prc77i1jl8vnb1q3lr9bb9s6ql2pcadv3i02ybnb"; depends=[igraph]; }; + mbbefd = derive2 { name="mbbefd"; version="0.8.8"; sha256="17f2y4xi5fxc6mms519xjb9qg94qqlxv0mhdbhjyyfg3x6bj7bsq"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; + mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; mbest = derive2 { name="mbest"; version="0.5"; sha256="0l6vmcqkd2b0b90jmsswrhbdmhq2x92g7sr2l99rp7xp1cxdq02w"; depends=[bigmemory foreach lme4 logging nlme]; }; mblm = derive2 { name="mblm"; version="0.12"; sha256="17h65bapvz89g5in3gkxq541bxgpj9pciz6i5hzhqn0bdbsb3k6r"; depends=[]; }; mbmdr = derive2 { name="mbmdr"; version="2.6"; sha256="0ss5w66hcgd8v8j9bbbp12a720sblhr2hy9kidqfr8hgjaqlch86"; depends=[logistf]; }; - mboost = derive2 { name="mboost"; version="2.6-0"; sha256="0ldg293nv4i8541w4il7hrw9hqgdk4q204dvrbmsrdb8i9cpm3s5"; depends=[lattice Matrix nnls party quadprog stabs survival]; }; - mc2d = derive2 { name="mc2d"; version="0.1-16"; sha256="0pw89pqmwlavb2bhhshv68fzf6s16a3rwj52prylv9clr07rw7pa"; depends=[mvtnorm]; }; + mboost = derive2 { name="mboost"; version="2.7-0"; sha256="1gzn80ixvdv560zl2r6gzcpbjcvhnkmdpis1l4gvidd7amrfzfp2"; depends=[lattice Matrix nnls party quadprog stabs survival]; }; + mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; + mc2d = derive2 { name="mc2d"; version="0.1-17"; sha256="07gxh9lpkrxvq7m1vbh8k4l4ka7wqf40sbj1zv99avlsvh9aicya"; depends=[mvtnorm]; }; mcGlobaloptim = derive2 { name="mcGlobaloptim"; version="0.1"; sha256="1p8841y9a4yq51prv6iirgw9ln8jznx8nk547sc5xlznksjy1g9n"; depends=[randtoolbox snow]; }; mcIRT = derive2 { name="mcIRT"; version="0.41"; sha256="0pbwydl4zjzwdlpzwpqm4xhq716zgq9s7bvcbrqp6q0jkba9zjnw"; depends=[Rcpp RcppArmadillo]; }; + mcPAFit = derive2 { name="mcPAFit"; version="0.1.3"; sha256="0yg79sry8jdp17mbdnfaj2phg3vdxs11si7hmfh5csfk7maax8v6"; depends=[PAFit RColorBrewer Rcpp]; }; mcbiopi = derive2 { name="mcbiopi"; version="1.1.2"; sha256="12h4bv3hx1m6bsqdxj5n3b5gh98ms508am8pigz7ckmv0xkyhx85"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; }; - mcga = derive2 { name="mcga"; version="2.0.9"; sha256="197yldx03c634f3x0mpxxvqrys93n7z7n3x0alvqa42z3vdkrz7b"; depends=[]; }; + mcga = derive2 { name="mcga"; version="3.0.1"; sha256="0q0nn881lii8wfw28k8jh9z0kbi5ljcwi2wpq460k2w3agsjzw5n"; depends=[GA Rcpp]; }; + mcgfa = derive2 { name="mcgfa"; version="1.0.0"; sha256="19q6lmrmbl3sh844n7mnl1r01bs8kgf0gghy4p4xmba1la0cb67k"; depends=[pgmm]; }; mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; }; + mcglm = derive2 { name="mcglm"; version="0.3.0"; sha256="1q2zc0xn4inp9inadb52yc0svbh581qxxjzc08pgrm9l3xms4a14"; depends=[assertthat Matrix]; }; mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; + mclcar = derive2 { name="mclcar"; version="0.1-8"; sha256="1hrjfjbsxh8g6bw2cfxciry8hn9xxfg4bww5p1sjq98v8bsqcx23"; depends=[fields maxLik nleqslv rsm spam spdep]; }; mcll = derive2 { name="mcll"; version="1.2"; sha256="0i9zqbh0l9a9mv4558gbdq9mh52chanykyfwmiymmxygxhp809sz"; depends=[locfit statmod]; }; - mclogit = derive2 { name="mclogit"; version="0.3-1"; sha256="0zyms6v9qjh6a5ccahfanarp4sg49yingb8wpjcz61skqvm8j7qx"; depends=[Matrix]; }; - mclust = derive2 { name="mclust"; version="5.1"; sha256="11hn3bdp6sl1l39v9c5afp6my11w2wxgqrbq0ahhll254va88sgd"; depends=[]; }; + mclogit = derive2 { name="mclogit"; version="0.4.4"; sha256="1nnzds9md3drcgblzpbg39a53v4npdbi0xp3xgw8xqfyy37nia59"; depends=[Matrix memisc]; }; + mclust = derive2 { name="mclust"; version="5.2.2"; sha256="19cbg7p5h2b6h9mvcx9rjppyd3awma18ymaljakbnclpvhwbqpwd"; depends=[]; }; mcmc = derive2 { name="mcmc"; version="0.9-4"; sha256="1ws80j64df8inzz0a6k8r51wf44zwjnpvp591pxwah2jbi6j6kna"; depends=[]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.2"; sha256="0ws2la6ln016l98c1rzf137jzhzx82l4c49p19yihrmrpfrhr26l"; depends=[coda colorspace denstrip sfsmisc]; }; - mcmcse = derive2 { name="mcmcse"; version="1.1-2"; sha256="1nvq1phv9ldp928yh7n97lsak26ycj717sic1cc1s46wv2rhjx0h"; depends=[ellipse Rcpp RcppArmadillo]; }; + mcmcse = derive2 { name="mcmcse"; version="1.2-1"; sha256="18k2cp5hpr3lzv9yva5qc379iq9aysnl872dv8jidwrj4iy2xccy"; depends=[ellipse Rcpp RcppArmadillo]; }; mco = derive2 { name="mco"; version="1.0-15.1"; sha256="14y10zprpiflqsv5c979fsc2brgxay69kcwm7y7s3gziq74fn4rw"; depends=[]; }; - mcparallelDo = derive2 { name="mcparallelDo"; version="1.0.0"; sha256="17k284siffaslgijldl0j0civjhgnfzpxrahlvj22p8rf2vspdhs"; depends=[ArgumentCheck R_utils R6]; }; - mcprofile = derive2 { name="mcprofile"; version="0.2-1"; sha256="0q1d236mcmgp5p5gl474myp1zz8cbxffd0kvsd8338jijalj05p0"; depends=[ggplot2 mvtnorm quadprog]; }; + mcparallelDo = derive2 { name="mcparallelDo"; version="1.1.0"; sha256="1ivh0d4f7ks6xwcjywk62h1zhr7h5bbhzpisky7973wi4g8vipbn"; depends=[checkmate R_utils R6]; }; + mcprofile = derive2 { name="mcprofile"; version="0.2-3"; sha256="0rakaa1p6z0p4jl4df357vi58wzph81ik6plc8zzl370r8mj1y8q"; depends=[ggplot2 mvtnorm quadprog]; }; mcr = derive2 { name="mcr"; version="1.2.1"; sha256="0237w41xichd418ax9xviq4wxbcc6c0cgr5gvzkca67nnqgc4jaz"; depends=[]; }; mcsm = derive2 { name="mcsm"; version="1.0"; sha256="13sx7s3ywis5n4a70ld2szld9fb8jkfsc82dy6iskhy17vy8pml0"; depends=[coda MASS]; }; + mctest = derive2 { name="mctest"; version="1.1"; sha256="0ck41xkrhfznzqqxk5yx5467ayd7wxqcjb6dzizbyz6dyjxbwm0n"; depends=[]; }; md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; - mda = derive2 { name="mda"; version="0.4-8"; sha256="1vb98zi0narqh2bwnjm33jnfzvgnaf1chh263xkgkpjb3ph0lvpd"; depends=[class]; }; - mdatools = derive2 { name="mdatools"; version="0.7.0"; sha256="0b010nmldafb5ibm0wzn4hxsyhwkx5f0g79mbcfh8lsq9zprq9am"; depends=[]; }; + mda = derive2 { name="mda"; version="0.4-9"; sha256="11gxgy4f3k03c4z6jpkzb4ynv0zl3k93b5s88ib8jjavzb95c95p"; depends=[class]; }; + mdatools = derive2 { name="mdatools"; version="0.8.2"; sha256="11xlfgcn8gb19alfjp268mlid9g2rl69s1nlm5plwyy5h8x0hvcj"; depends=[]; }; mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; - mdhglm = derive2 { name="mdhglm"; version="1.2"; sha256="0k7y5j03i49m791m99vy0cal9w5nc38w18j1zq1zqdccpcndz9pj"; depends=[boot Matrix mvtnorm numDeriv]; }; - mdscore = derive2 { name="mdscore"; version="0.1-2"; sha256="1g473rwffkb2x6y6wcm98i6xr5dhz11ypnbrvhb2klbvi81jj511"; depends=[MASS]; }; + mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; }; + mdhglm = derive2 { name="mdhglm"; version="1.6"; sha256="1lvckais4c3pbf6zrpfkdlyqhcg4jaw11n00622h9ks413fl788v"; depends=[boot Matrix mvtnorm numDeriv]; }; + mdmb = derive2 { name="mdmb"; version="0.2-0"; sha256="13pkz0mjvd5gph1fpz3cd2yn5mb0lsvyjr7xr9bbikh11jqx80wb"; depends=[CDM coda miceadds sirt TAM]; }; + mdpeer = derive2 { name="mdpeer"; version="0.1.0"; sha256="0z84xm189v99frnayp4vr0qr7fr495sai5mjvyqpv9cbhvqn3xkr"; depends=[ggplot2 glmgraph glmnet magic MASS nlme nloptr reshape2 scalreg]; }; + mdsOpt = derive2 { name="mdsOpt"; version="0.1-1"; sha256="1fz80nc4xxd8q9zdfa38z159n35jf9y90ys39rgdzmc7ahqpkvh1"; depends=[clusterSim smacof]; }; + mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; + mdsr = derive2 { name="mdsr"; version="0.1.3"; sha256="19ryy7cm2ia3xi54r0176n72y7w35dqml0l7ysi6qd8zy4yavkvx"; depends=[babynames DBI dplyr ggplot2 mosaic RMySQL]; }; + meanShiftR = derive2 { name="meanShiftR"; version="0.50"; sha256="0wb08x9vanwfzs7ijskl53118jvy3z48gqda7gn33aq82dkablza"; depends=[]; }; measuRing = derive2 { name="measuRing"; version="0.3"; sha256="16lgvk9lm0vjy50das0qq0h0z683hh94spjcdmkljmxxzwmzfl4b"; depends=[pastecs png tiff]; }; - meboot = derive2 { name="meboot"; version="1.4-6"; sha256="17wjvc375vnya1lhkj10nsn68k1j3zy036031qca3wxx6wqw9kzx"; depends=[dynlm nlme]; }; + measurements = derive2 { name="measurements"; version="1.1.0"; sha256="1zi6mpwyxycbphq48s7vfc8gm76nidpa2gafp0jxiv56rwpv3jc3"; depends=[]; }; + meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; }; medSTC = derive2 { name="medSTC"; version="1.0.0"; sha256="1f7w6jbxairqvghr5b7vgdllg3ian16a1fgi7vqlq0mhy2j6phan"; depends=[]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; - medflex = derive2 { name="medflex"; version="0.6-0"; sha256="1qwjs418i2wxmszgax4l859ihk2avlxwm5w0a772zi6gj0kqwk3d"; depends=[boot car Matrix multcomp sandwich]; }; + medfate = derive2 { name="medfate"; version="0.2.2"; sha256="1vw9j04063sjwyfdkk94xsgz5zps7vmqha6dbsvi8ncb951cfijp"; depends=[meteoland Rcpp sp spdep]; }; + medflex = derive2 { name="medflex"; version="0.6-1"; sha256="0i3808qh4ryqcgx5rl60d4xdy25wzx008abijg5fcirsrdly7j91"; depends=[boot car Matrix multcomp sandwich]; }; mediation = derive2 { name="mediation"; version="4.4.5"; sha256="0jq0gg5ydqvy0vv8m7xk609ljw7p31jppgwgin3y3mvd32wapgk3"; depends=[Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; medicalrisk = derive2 { name="medicalrisk"; version="1.2"; sha256="1zdxv3rj7768kbyxfvr9n0hp4z7y0sf3r7ssqv731hjjp656l6xp"; depends=[hash plyr reshape2]; }; + medicare = derive2 { name="medicare"; version="0.2.0"; sha256="1z0ch704cw43hsp97j9mf6s0w9rpiv76swk7xlbiqcmyv7wivrhy"; depends=[]; }; mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; - mefa4 = derive2 { name="mefa4"; version="0.3-3"; sha256="1bb5m6hqs79jbs51crl8h73lwvfqnj99jqgagb0whpxg9yviffrn"; depends=[Matrix pbapply]; }; + mefa4 = derive2 { name="mefa4"; version="0.3-4"; sha256="11zg30i2fkxdv8fn7jilbmm7k5g0ls8f91bpq6qiwiagwg8gj2lh"; depends=[Matrix pbapply]; }; megaptera = derive2 { name="megaptera"; version="1.0-0"; sha256="1fczhdydqca1jcdc315kwrhxcjisxfq23l4sm7m2011k5nrjmv37"; depends=[ape ips RPostgreSQL seqinr snowfall XML]; }; meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; }; + melviewr = derive2 { name="melviewr"; version="0.0.1"; sha256="19syc3d6zc0hmcjjdj7ibrdqxcdlh95ny970f3ska453qh1898b2"; depends=[cairoDevice gtools gWidgets gWidgetsRGtk2 jsonlite RColorBrewer RGtk2 RNifti]; }; mem = derive2 { name="mem"; version="1.4"; sha256="1d3fgllh7fhlfz3rz2jm31r8vn7msz4na4762iaw161qp2j101db"; depends=[boot sm]; }; memgene = derive2 { name="memgene"; version="1.0"; sha256="00b1mi2hvzzps542mh2p96s27kjqkpcic7djklfcwnfn1m4bz0i5"; depends=[ade4 gdistance raster vegan]; }; - memisc = derive2 { name="memisc"; version="0.99.6"; sha256="0pjcg0z4m1kr12cj1x1lm8snjldb2f1xp2sx0v6k7c1xdzmsxnmc"; depends=[lattice MASS]; }; + memisc = derive2 { name="memisc"; version="0.99.8"; sha256="1wdh8qsf6n3zg5hkgjngnabbabi0kq31prcscm39kfiv3jmvh7pk"; depends=[lattice MASS]; }; + memo = derive2 { name="memo"; version="1.0"; sha256="1pqlsn79gpm0d5bxnjg1c1gjaqdrdvcjvr84zpfk6nmsb2862w48"; depends=[digest]; }; memoise = derive2 { name="memoise"; version="1.0.0"; sha256="0sq2dhpvxy17v1baj256r0jnygdy3m5a8x4zh6vhv29957qnq6zx"; depends=[digest]; }; - memuse = derive2 { name="memuse"; version="2.5"; sha256="1a34803k41644yw1h3msywslsfjvnxi5c9yjw0b73znzy76wh6wv"; depends=[]; }; - merTools = derive2 { name="merTools"; version="0.2.0"; sha256="146rskqzvmkvra5kvnfmn8r0g1jbbw16w9hxgzpa91xvq3bwz6qa"; depends=[abind arm blme broom DT ggplot2 lme4 mvtnorm plyr shiny]; }; + memuse = derive2 { name="memuse"; version="3.0-1"; sha256="1fxjw209sjk9cfbbfw1ixnf2s8zzc73gnksxa9qax4mp6145i1w5"; depends=[]; }; + merDeriv = derive2 { name="merDeriv"; version="0.1-1"; sha256="1bkpn4a4g9ps0wzrw77w0lj14h6rdpz1bicwqvv98316ggv0zkxw"; depends=[lme4 Matrix nonnest2 sandwich]; }; + merTools = derive2 { name="merTools"; version="0.3.0"; sha256="1kc32zm1wmmivf1qfs6vi7y8kwibj6sr540is82dyh7xdmbc5mx3"; depends=[abind arm blme broom dplyr DT ggplot2 lme4 mvtnorm shiny]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; - metRology = derive2 { name="metRology"; version="0.9-17"; sha256="1g4gv3mpii71i6imfwqg9d5iwfx03bq4lizzhx7dy39b2mj7jd4q"; depends=[MASS numDeriv]; }; - meta = derive2 { name="meta"; version="4.3-2"; sha256="0970snzclh83rz446m1r2bkfiylxx444z6bp7ah6lka488wmyck6"; depends=[]; }; - meta4diag = derive2 { name="meta4diag"; version="1.0.20"; sha256="1x0s5jz1wnk7h9skxnyha8p0b77mfffn2y4i9sl7nr6rmkn7caj9"; depends=[cairoDevice RGtk2]; }; + metRology = derive2 { name="metRology"; version="0.9-23-2"; sha256="16hdcrqa15mf2cfgl6r9awd0y2kwrdbld8sxqmwnchlvdbm6gib4"; depends=[MASS numDeriv robustbase]; }; + metScanR = derive2 { name="metScanR"; version="0.0.1"; sha256="1mhdgrh4nc14avfsf1f4rpq8qxkgsd9v65dvhvqq7swykia9vsfv"; depends=[geosphere ggmap leaflet plotly RColorBrewer rjson]; }; + meta = derive2 { name="meta"; version="4.7-1"; sha256="1b5g0rd5bllz3g4if7j5crgavz2a5mky5gchfpxyp0yl2jar4br3"; depends=[]; }; + meta4diag = derive2 { name="meta4diag"; version="2.0.5"; sha256="0hwzwyzr23sqlqpx2372419167wad1q7spyzmcxhf4f5hmqv14c9"; depends=[caTools shiny shinyBS sp]; }; metaLik = derive2 { name="metaLik"; version="0.42.0"; sha256="1rk5mwgmgnqq2hrzbh936hzw3aa815l12r1a1qywap5ggmmyhszl"; depends=[]; }; metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; }; metaMix = derive2 { name="metaMix"; version="0.2"; sha256="0xlsdgincxwjzyr4i8qfmfw2wvgf41qbmyhf2rxcbarf7rmwhmqf"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; }; - metaSEM = derive2 { name="metaSEM"; version="0.9.6"; sha256="18ghgvpm915l5g0gq45r29zbh5k0gi8ygr4dcv7xn36r8b0zgc0r"; depends=[ellipse MASS Matrix OpenMx]; }; + metaSEM = derive2 { name="metaSEM"; version="0.9.12"; sha256="1lmsqpfb1yxdlwb2qhcsm7111w25qlz6794i2pwf5wmaixwyw0nj"; depends=[ellipse MASS Matrix OpenMx]; }; metabolomics = derive2 { name="metabolomics"; version="0.1.4"; sha256="0m5d2784mkpkkg396y3vpvf38vmba5kvxarilq3zf818vjs4pnax"; depends=[crmn gplots limma]; }; - metacom = derive2 { name="metacom"; version="1.4.3"; sha256="0djq2ry2vriayn839f0pgkq4j8j1zyd8ribmzn6ngfhz305fszlq"; depends=[devtools lattice vegan]; }; + metacoder = derive2 { name="metacoder"; version="0.1.2"; sha256="0srrmmn86jpxdx463qngd1fj8ssnly18kb74csa9957n1lr0l9xf"; depends=[ape dplyr ggplot2 igraph lazyeval magrittr RColorBrewer RCurl readr reshape reshape2 scales seqinr stringr taxize traits zoo]; }; + metacom = derive2 { name="metacom"; version="1.4.4"; sha256="14snpgdl8lwfh3fy63728jpxp6yjchq7i5sqfhzkfmrmy3kwgl22"; depends=[vegan]; }; metacor = derive2 { name="metacor"; version="1.0-2"; sha256="04k3ph0yg3jp8x4g6l1h4m0qwl51mx0626xmm0fzr1pv4b4a1ypw"; depends=[gsl rmeta]; }; metafolio = derive2 { name="metafolio"; version="0.1.0"; sha256="18s78lljwnn3j0l3mqc0svszcb3c8yzyzlpnimndbiq9yxagxnnf"; depends=[colorspace MASS plyr Rcpp RcppArmadillo]; }; - metafor = derive2 { name="metafor"; version="1.9-8"; sha256="1wcryg32ln8prcxc0x1r0ms01c4mxd6vzhpb9bv9r2qpjjc7ixm7"; depends=[Matrix]; }; - metafuse = derive2 { name="metafuse"; version="1.0-1"; sha256="0r64s0nqc75knk378ffhgk1y3i0j3k4ff0scya2p925ra18vfn9p"; depends=[glmnet MASS Matrix]; }; - metagear = derive2 { name="metagear"; version="0.2"; sha256="02h7bzhijb9glzayin1wby4pkskfdav4m3grvrkz8iq9srnxskc5"; depends=[EBImage gWidgets gWidgetsRGtk2 MASS Matrix metafor stringr]; }; + metafor = derive2 { name="metafor"; version="1.9-9"; sha256="14287z65ffm013787wfnyb9842zcv63i97g445xa4j8075p8sp7p"; depends=[Matrix]; }; + metafuse = derive2 { name="metafuse"; version="2.0-1"; sha256="1zdw22f5kzvy2xr3c2csy873hcags60as567brc2sw17d0apfy8j"; depends=[evd glmnet MASS Matrix]; }; + metagear = derive2 { name="metagear"; version="0.3"; sha256="0xhaqpyhix7akk4vmb1zxi69g1j7c2h8d5fk547qfx7nqaiwzh53"; depends=[EBImage gWidgets gWidgetsRGtk2 hexView MASS Matrix metafor RCurl stringr]; }; metagen = derive2 { name="metagen"; version="1.0"; sha256="0jvbm22976aqvmfnjzs51n2w099yj5hpx6hd0pgvbia80jk7b9vk"; depends=[BatchExperiments BatchJobs BBmisc ggplot2 lhs MASS metafor ParamHelpers plyr]; }; - metaheur = derive2 { name="metaheur"; version="0.1.0"; sha256="0bdvfa6y6w8ybdnr0h414bzikkrdp4g5mrcsprzhxwim96j8imh6"; depends=[ggplot2 preprocomb reshape2]; }; + metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; }; metamisc = derive2 { name="metamisc"; version="0.1.1"; sha256="1cvlsix3b857xdw6anqhqsrfwxpnf4rbzg4ybf6aw7vcdc05zgwd"; depends=[bbmle coda ellipse mvtnorm rjags]; }; - metansue = derive2 { name="metansue"; version="1.0"; sha256="1vcyvvysfz9frdy35g3p2hvndcdd4dk7kccwsgwzl7sl6ag73596"; depends=[]; }; - metap = derive2 { name="metap"; version="0.6-2"; sha256="1j0k3pxr7qsmn4ldnl650nqv0si6l67gm4shx9mpswgsbpg3wkx4"; depends=[]; }; - metaplus = derive2 { name="metaplus"; version="0.7-6"; sha256="15rngr7ckrykdzad46vanpmgsid14q574357i02pq8rqylk4s4h5"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; - metasens = derive2 { name="metasens"; version="0.3-0"; sha256="1j955p5i116ggvd6nk0dp6r8qc0nh7v1iv48vaz7dds4m951lzyv"; depends=[meta]; }; + metansue = derive2 { name="metansue"; version="1.2"; sha256="0gcysmi4lvl4496vygc7v58pd4sgz013mr8nqb870s861jwjj31v"; depends=[]; }; + metap = derive2 { name="metap"; version="0.8"; sha256="06ny9zkilawdy0s8yiwhnygs3yppw89bbyf76zgdavykbzscz5lh"; depends=[lattice]; }; + metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; + metaplus = derive2 { name="metaplus"; version="0.7-9"; sha256="1hrczccszx9jcgifwg6wsigsbm8ih4xjr00knb0rxyygijk38c82"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; + metasens = derive2 { name="metasens"; version="0.3-1"; sha256="0nxvllfa2x6v2hpgind5xr0i40wi7cpdd18lwgy9s4jpgbn0n17p"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-4"; sha256="0bz6gg2n4ffkr144jxk27y24xpqhp8awr09wkaijmv8902qx6qah"; depends=[]; }; - meteR = derive2 { name="meteR"; version="1.1"; sha256="0b41a6v7w3n06dyz81v5zhh1ncqx3lascdl5lrwbdjxypcdjv0cf"; depends=[distr nleqslv]; }; + metavcov = derive2 { name="metavcov"; version="0.1"; sha256="0d57gn802cnpmvyxkczmqafllglzgw17jn4rpj659s16qh0fz4j2"; depends=[corpcor]; }; + metaviz = derive2 { name="metaviz"; version="0.1.0"; sha256="1cl44dvd625sfz906cggrj092bxy35vsiglalsay9frsi440d82p"; depends=[ggplot2 plyr RColorBrewer]; }; + meteR = derive2 { name="meteR"; version="1.2"; sha256="02637d3dnfq0jv9d74y99x7ms89y3jcmkpazc44g44sa7jx4i510"; depends=[distr nleqslv]; }; meteo = derive2 { name="meteo"; version="0.1-5"; sha256="0n37plka9vsxwd03lca3h6m8dcz3f1bi46jn3bz7vyilnkq9hcdk"; depends=[gstat plyr raster rgdal snowfall sp spacetime]; }; - meteoForecast = derive2 { name="meteoForecast"; version="0.49"; sha256="0h3qb7srfmv4bl207arz6x3q64bh5pb0pc49lgrnplcjwwxk78bs"; depends=[raster sp XML zoo]; }; + meteoForecast = derive2 { name="meteoForecast"; version="0.50"; sha256="19yzfvaj4h5l70j54nlivq5dvp5psp43y5d2l978ai6pwvmi291a"; depends=[ncdf4 raster sp XML zoo]; }; meteogRam = derive2 { name="meteogRam"; version="1.0"; sha256="167gyxjnl4dyfqs3znv8sdpkvpqdxzdqi1g730s30gycrm9snap9"; depends=[ggplot2 RadioSonde]; }; + meteoland = derive2 { name="meteoland"; version="0.5.2"; sha256="17sfi14q5cp74cmlvhbyg6xlpiw9ssqc4kp48r41allk38dfk1zd"; depends=[curl ncdf4 ncdf4_helpers qmap Rcpp rgdal sp spdep]; }; + metricTester = derive2 { name="metricTester"; version="1.3.2"; sha256="1n64l69w5skbymizm5ghq50gwhpasyk9zmywib6hkd9k5ijgayv5"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; - mets = derive2 { name="mets"; version="1.1.1"; sha256="1myqcds9glsy3fwzr7v711xzk7gmvy2cb4x3qgj1kxa90d1d50hz"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; - mev = derive2 { name="mev"; version="1.6.1"; sha256="09n6vhga6h4k3iqwxrbr9ba2jh8rwnydsnrgq61iwndz0bqd24ig"; depends=[evd ismev Rcpp RcppArmadillo]; }; + mets = derive2 { name="mets"; version="1.2"; sha256="078g04bj3ipwz3cw5wkz0gvj1dmd5vxygkwpz4pymg0r9svy2yf2"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; + mev = derive2 { name="mev"; version="1.10"; sha256="0kidgghwjc81rx2vb8y1iiwvlfxafv7r11n3zz1gb7705w6ynw1m"; depends=[boot evd gmm ismev nleqslv numDeriv Rcpp RcppArmadillo rootSolve]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; + mexhaz = derive2 { name="mexhaz"; version="1.1"; sha256="168a8b3y17nh2dalqanph384laf2awv3jdk8dm9cl5jbkh7ah4lb"; depends=[MASS statmod survival]; }; + mfe = derive2 { name="mfe"; version="0.1.0"; sha256="06x6csf3pr1vdmmimg6f7iffrivj8wcdfafvld7nrzbkl09cbfbn"; depends=[C50 class e1071 infotheo MASS rpart]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.1"; sha256="1zhpk38k7vdq0pyqi1s858ns19qycs3nznpa00yv8sz9n798wnn5"; depends=[betareg lmtest MASS sandwich]; }; - mgcv = derive2 { name="mgcv"; version="1.8-12"; sha256="1khzy36nn6xbnzqfc2953ng0sv8w91mns1ymhibaqn1150x1qid0"; depends=[Matrix nlme]; }; + mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; + mgcv = derive2 { name="mgcv"; version="1.8-17"; sha256="1zj223l4a3j15d3c01wv7dkzn9w6084gxrq5600ck9rvr0lfpwwg"; depends=[Matrix nlme]; }; + mglR = derive2 { name="mglR"; version="0.1.0"; sha256="1b7nd913d4a1szgw2qnhlnjqhfxr95xag6jwjcb2wnnxd12lib7n"; depends=[biomaRt dplyr gdata ggplot2 gplots magrittr stringr]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; - mgm = derive2 { name="mgm"; version="1.1-4"; sha256="02m1ihi9m9x9m0jqwgp67k9f9lnq76cskx77wxzy69nbl1d91xh7"; depends=[glmnet matrixcalc Rcpp]; }; + mgm = derive2 { name="mgm"; version="1.1-7"; sha256="01srb1fb3ndfh1jimrdvf35g3f25jddij0sdi3n2d7gm4x8s0h24"; depends=[glmnet matrixcalc Rcpp]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; mgraph = derive2 { name="mgraph"; version="1.03"; sha256="0av2c0jvqsdfb3i0s0498wcms0n2mm0z3nnl98mx2fy7wz34z8b2"; depends=[rgdal]; }; mhde = derive2 { name="mhde"; version="1.0-1"; sha256="1q7lbj2is024f5rmfpdn3a0hsb78bf62ddal3chhnh3bi1z3jrjk"; depends=[]; }; - mhsmm = derive2 { name="mhsmm"; version="0.4.14"; sha256="1zrqnzbmlk3kmwbq9rl4bdkc9iawkgn3qr7nzsa782v55i7w2wiz"; depends=[mvtnorm]; }; + mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; }; mht = derive2 { name="mht"; version="3.1.2"; sha256="01zcaf9k0qayzm8dn5dvnm5n3qgqpj8r96qhqaa5vbjcr6ci2x2r"; depends=[glmnet Matrix]; }; - mhurdle = derive2 { name="mhurdle"; version="1.0-1"; sha256="1x631fgbq3ika05svyavzadyjd7vi9bcmsgb58wfhpf9xq6j5rcr"; depends=[Formula maxLik pbivnorm truncreg]; }; + mhtboot = derive2 { name="mhtboot"; version="1.3.3"; sha256="1z0p8ny9lpnrshgas7cad2lv7j0blw0n6ihiimw600n70h73jwrn"; depends=[ggplot2 reshape2]; }; + mhurdle = derive2 { name="mhurdle"; version="1.1-7"; sha256="06ph0vbm7yk5388v2aww6nmi2rhjhfjj1hl506a41m5k6hf746pk"; depends=[Formula maxLik survival texreg truncreg]; }; mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; miCoPTCM = derive2 { name="miCoPTCM"; version="1.0"; sha256="1lmf6zahfp59ylhdp2cbr7y3vayhim72zazimg4qfld4r9d6kygc"; depends=[distr MASS nleqslv survival]; }; miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; }; @@ -5456,95 +6813,113 @@ in with self; { micEconAids = derive2 { name="micEconAids"; version="0.6-16"; sha256="07hsabrlkwpdaalh0b7izraz2q5dlxn373ccijc5c4zsrkgk7kij"; depends=[lmtest micEcon miscTools systemfit]; }; micEconCES = derive2 { name="micEconCES"; version="0.9-8"; sha256="06g6z8hf7y9d942w6gya0fd5aidzfjkx3280gjygdlwpv7nlpqzv"; depends=[car DEoptim micEcon minpack_lm miscTools systemfit]; }; micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; }; - mice = derive2 { name="mice"; version="2.25"; sha256="1c6xjvqy3w5lqbs4k22vb3x3an4ss22zpp2zigwhnm1y9mphg06x"; depends=[lattice MASS nnet Rcpp rpart survival]; }; - miceadds = derive2 { name="miceadds"; version="1.7-8"; sha256="0f7vh96q9xp9v5hbb15bvm3825kl51zz582rd98d4kgd7nk4896a"; depends=[bayesm car foreign grouped Hmisc inline lme4 MASS MBESS MCMCglmm mice mitools multiwayvcov mvtnorm pls Rcpp RcppArmadillo sirt sjmisc TAM]; }; + mice = derive2 { name="mice"; version="2.30"; sha256="1r673x51vs3w7kz4bkp2rih4445hcmajw86gjwz7m2piajwvs817"; depends=[lattice MASS nnet Rcpp rpart survival]; }; + miceadds = derive2 { name="miceadds"; version="2.3-0"; sha256="0jmj5zrggbyp5yaqn96naicfm6ajir3ybs9j1028vxdj2wyapz13"; depends=[blme car CDM foreign grouped lme4 MASS MCMCglmm mice mitools multiwayvcov mvtnorm Rcpp RcppArmadillo sirt sjmisc TAM]; }; + micompr = derive2 { name="micompr"; version="1.0.1"; sha256="1380x9jp5lpc6n6bjvhmkwlb59ch7q59r3bc6f0i5j2kpaairbc4"; depends=[]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; microbenchmark = derive2 { name="microbenchmark"; version="1.4-2.1"; sha256="0qn5r1a6qidghcisc2hpbdmj62pnixc3zz6p4ipk8mvakf0hdsvg"; depends=[ggplot2]; }; + microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; }; + microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; }; micromap = derive2 { name="micromap"; version="1.9.2"; sha256="1x4v0ibbpfz471dp46agib27i4svs8wyy93ldriryvhpa2w5948y"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; - micromapST = derive2 { name="micromapST"; version="1.0.5"; sha256="1n9mzyl5dj21165j0j99brkqq7c54j3cg6r21ifdzffj2dx29wh0"; depends=[RColorBrewer]; }; - micropan = derive2 { name="micropan"; version="1.0"; sha256="0qnxm6z2pk1wibchj6rhn3hld77dzl5qgvzl4v9n16ywlgdv09ai"; depends=[igraph]; }; - midasr = derive2 { name="midasr"; version="0.5"; sha256="1w3rxsxkcjy30sjxv4cxvqzfw7k278s6mrrjm4pbz7cydbiws2vp"; depends=[forecast MASS Matrix numDeriv optimx sandwich]; }; + micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; + micropan = derive2 { name="micropan"; version="1.1.2"; sha256="0rvaampr5vlpz253lhy330380646g2vqj1hqp6gsk0gp0hdlkd7g"; depends=[igraph microseq]; }; + microplot = derive2 { name="microplot"; version="1.0-16"; sha256="144rj86lkjkmwlqwlwmnagvlknhg0wg92kabpfpz2w0swfhfa742"; depends=[Hmisc]; }; + microseq = derive2 { name="microseq"; version="1.2"; sha256="14w1fycw0jgrc5g0ygks9j28hy37li057qf097qnp18w05jk3hws"; depends=[Rcpp]; }; + midasr = derive2 { name="midasr"; version="0.6"; sha256="1sg6m36jg3b6znfg97ln5a6b4z36xkyjvgxk7wmqdq3h528z8613"; depends=[forecast MASS Matrix numDeriv optimx sandwich]; }; midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; }; - midrangeMCP = derive2 { name="midrangeMCP"; version="1.1"; sha256="0ripx7ydvbs3b5g6k2q7nnmrzq9i1wfa6whc536q5wimfd0gzlkg"; depends=[SMR WriteXLS xtable]; }; - migest = derive2 { name="migest"; version="1.7.1"; sha256="0xxca4ww13ml4pvdc688pp7vikwgyp8mz5czw896mh37z8lhdvvj"; depends=[]; }; + midrangeMCP = derive2 { name="midrangeMCP"; version="1.3"; sha256="1733dlhzbgrjdzd88rh9dkqhxh05gr078sbmihab7whbrpsq8068"; depends=[SMR WriteXLS xtable]; }; + migest = derive2 { name="migest"; version="1.7.3"; sha256="1g49b4fa2974w8alb97k06k3zi49q66n16cvcbqdaj9j21c9qfmy"; depends=[]; }; migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; }; migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; - mime = derive2 { name="mime"; version="0.4"; sha256="145cdcg252w2zsq67dmvmsqka60msfp7agymlxs3gl3ihgiwg46p"; depends=[]; }; + milonga = derive2 { name="milonga"; version="1.0"; sha256="1pkmh1mabqag38xzw2s86x9c6pr83wlmh4f45s7km5g0j1zllrd9"; depends=[MCMCpack]; }; + milr = derive2 { name="milr"; version="0.2.0"; sha256="1fhpnibs99045fcphydgdh7mdbpclbskbb74zlvhpbr6q8hh70hd"; depends=[assertthat glmnet numDeriv pipeR purrr Rcpp RcppArmadillo]; }; + mime = derive2 { name="mime"; version="0.5"; sha256="0i91m3ivaja1k33jwcvz16pfjypkci27awm8glil7sxhmwaj3izw"; depends=[]; }; minPtest = derive2 { name="minPtest"; version="1.7"; sha256="088kckpbfy2yp0pk3zrixrimywrvkaib5ywa7fkr5phnzlsl80sv"; depends=[Epi scrime]; }; minerva = derive2 { name="minerva"; version="1.4.5"; sha256="0k6hyfh1lr345718vl1ssqgm5567nylk158awygmbjgkv8g8v2av"; depends=[]; }; - miniCRAN = derive2 { name="miniCRAN"; version="0.2.4"; sha256="1p8kypq0r4sckvdq7qfznfjp3mpjy3cvm9dnwpdfn4dnl4n377z0"; depends=[httr XML]; }; + miniCRAN = derive2 { name="miniCRAN"; version="0.2.7"; sha256="0ijvsc0aqhcyy5fmxjh7ks4f40l5hm3p485x80a475bmjrh9g15w"; depends=[httr XML]; }; miniGUI = derive2 { name="miniGUI"; version="0.8.0"; sha256="1iq52x7wbcin7ya207jj3k9vym7mavm5z61vggyabdmr768pci39"; depends=[]; }; miniUI = derive2 { name="miniUI"; version="0.1.1"; sha256="1qfca55phw6614qh5ligvqawpyvpb08x7ky44sffwxgff4h074lw"; depends=[htmltools shiny]; }; + minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; }; minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; }; minimax = derive2 { name="minimax"; version="1.0"; sha256="1g0d9q5h1avbb0yg7ajw5330820i3n5cgkpsif754l4j3ikya8p3"; depends=[]; }; + minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.1"; sha256="0rclwfqpj262krghjcmq79fb2m2syb39jxk048ll98a58bz103dp"; depends=[DiceDesign doParallel doSNOW foreach gtools MaxPro nloptr randtoolbox Rcpp RcppArmadillo]; }; minimist = derive2 { name="minimist"; version="0.1"; sha256="007y829d766b1v6wkrhk7pkg99r38bvmhc8bwvs8rs13dr7444ln"; depends=[V8]; }; - minpack_lm = derive2 { name="minpack.lm"; version="1.2-0"; sha256="0h8grkwkm2w0jl9fl5kma3b6p1n76gm42qbsyrnhr7pwsxx4qwgr"; depends=[]; }; + minpack_lm = derive2 { name="minpack.lm"; version="1.2-1"; sha256="18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"; depends=[]; }; minqa = derive2 { name="minqa"; version="1.2.4"; sha256="036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg"; depends=[Rcpp]; }; minque = derive2 { name="minque"; version="1.1"; sha256="1hx4j38213hs8lssf9kj5s423imk7dzv60mdbzrpbp7la7jk2n57"; depends=[klaR Matrix]; }; - minval = derive2 { name="minval"; version="0.2"; sha256="1hjj24vpnva130bfxn8dczhfn30rcgichi25y77rgaw3z58hm39n"; depends=[]; }; + minval = derive2 { name="minval"; version="0.5"; sha256="1pbcfcaysaicppkzvnllvvx2jykc17nk3331n0rl41x56jxcjsgd"; depends=[gdata XML]; }; minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; - mipfp = derive2 { name="mipfp"; version="2.2.1"; sha256="0i69pbwszwqgc7wyfvnwgbp73dw0vg0pf692wyiwjkqvyfdrqa40"; depends=[cmm numDeriv Rsolnp]; }; - mirt = derive2 { name="mirt"; version="1.16"; sha256="1lafpm7fizvvyv2f5gyabj1chl0vdf3q0bv77swz2cxjvlznc9aw"; depends=[GPArotation lattice mgcv numDeriv Rcpp RcppArmadillo sfsmisc]; }; - mirtCAT = derive2 { name="mirtCAT"; version="0.8"; sha256="077pcirvvvqh0fsgna5r4dhqvyfv8hp7bfn6c8cgfi8wgbisa634"; depends=[lattice markdown mirt Rcpp RcppArmadillo shiny]; }; + mipfp = derive2 { name="mipfp"; version="3.1"; sha256="18cfv8s38cd0g1wc5pry6a4m2ykqflkxhqbqnjbjvmr42bj3r6sp"; depends=[cmm numDeriv Rsolnp]; }; + mirt = derive2 { name="mirt"; version="1.22"; sha256="0jzxmj2a0kq0xylsxrkd6j9rzvy3y0qkl823pb84mc3zv2jwnjrx"; depends=[GPArotation lattice mgcv numDeriv Rcpp RcppArmadillo sfsmisc]; }; + mirtCAT = derive2 { name="mirtCAT"; version="1.3"; sha256="00zmli79ll313qjjl0j28ibxdjn41zfgwx43cg9mzzm6ayiz26ci"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; - miscF = derive2 { name="miscF"; version="0.1-2"; sha256="195rb9acdirfhap0z35yvcci5xn4j84mlbafki4l1vfgqgnh0ajj"; depends=[MCMCpack mvtnorm Rcpp RcppArmadillo]; }; - miscFuncs = derive2 { name="miscFuncs"; version="1.2-7"; sha256="1cnhd23fi6akr3fsr2b85s5cn36ksy4h3c4iyyjqcpc49wa819d0"; depends=[mvtnorm roxygen2]; }; - miscTools = derive2 { name="miscTools"; version="0.6-16"; sha256="19mslb64lm8srrmml1v40rfkxhqw02bplw0yjv7qnkqj44hcqfw1"; depends=[]; }; + miscF = derive2 { name="miscF"; version="0.1-3"; sha256="1djmsffwkicj25ndg07dnid6qj66b1rdw0yrv79jakjfbv71c13i"; depends=[BayesBridge BRugs MASS MCMCpack mvtnorm R2jags Rcpp RcppArmadillo]; }; + miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; }; + miscTools = derive2 { name="miscTools"; version="0.6-22"; sha256="1sngkl5rwg1vp2xx9a5g2nz2nhwxwv7ni21ww7hyjc8x5mhb42yh"; depends=[]; }; + misclassGLM = derive2 { name="misclassGLM"; version="0.2.0"; sha256="1dz36q2gl0q8d0s2rxn28b8ykw31wcdxf91s7ypmjggfdj64i8br"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; + miscor = derive2 { name="miscor"; version="0.1-0"; sha256="0kgdsqcqdfi7976qc2f2r6z68z6znrgwgcr801cfkqql8s0wksfj"; depends=[PoisNonNor]; }; miscset = derive2 { name="miscset"; version="1.0.0"; sha256="0m6gv2w8fj1604wrmcdgz6dpmpkz7j3sppda11klsx0hv1xqr2af"; depends=[ggplot2 gridExtra Rcpp xtable]; }; - missDeaths = derive2 { name="missDeaths"; version="1.2"; sha256="0lamxws1qqafz1mqdrzmq6jjn490z8zd63w4mzyb5nwwlxbmy6v8"; depends=[cmprsk mitools Rcpp relsurv rms survival]; }; + mise = derive2 { name="mise"; version="0.1.0"; sha256="1ydbm76w3y0p5h82shxjblwlzbrmzwx0bgq9w2axjwz2nx8jfw0a"; depends=[]; }; + misreport = derive2 { name="misreport"; version="0.1.0"; sha256="1nys59bik6cnrpdh1azp2y9k201y326hbf5jzv2kilh34p57ilfs"; depends=[mvtnorm numDeriv VGAM]; }; + missDeaths = derive2 { name="missDeaths"; version="2.2"; sha256="0gkzq7jpqkfcvc40i0xdjxmwmn1mpd7p4hik4fqz22q3pvmhmmwn"; depends=[cmprsk MASS mitools Rcpp relsurv rms survival]; }; missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; - missMDA = derive2 { name="missMDA"; version="1.9"; sha256="1g8b37cjaya1g5hkqwjgamnh4jfsqw90453yxh3jnvdw7irl4vsm"; depends=[FactoMineR mice mvtnorm]; }; - mistat = derive2 { name="mistat"; version="1.0-3"; sha256="12fykqkcqfxn8m8wwpw69f7h2f24c5yhg4fw50jsifhcj40kk29q"; depends=[]; }; - mistral = derive2 { name="mistral"; version="2.0.1"; sha256="037jp2p8h29by5a1gmm6irlsgz72rqi4zfbfjhk1c1gfk2fr3dfb"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; - mitml = derive2 { name="mitml"; version="0.3-0"; sha256="1vk2y48mcvm6f7vr4m8y726ygi8d1zf70jz6yy8i91gzakmsrr4x"; depends=[haven jomo pan]; }; + missMDA = derive2 { name="missMDA"; version="1.10"; sha256="1wqb5badqcs6yj2c7llbhbssdzg0irjzfcjasfrq1zg0lk82zafj"; depends=[FactoMineR mice mvtnorm]; }; + mistat = derive2 { name="mistat"; version="1.0-4"; sha256="0gzng0kl3handy3k7g62c4sdcf9l6x0b69jxmfrwfd4297f57n9n"; depends=[]; }; + mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; + mitml = derive2 { name="mitml"; version="0.3-4"; sha256="0lwy87f0v43i6fpbhl85vg9x5mvll8bllcm6q2qj06nk7yy25573"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.3"; sha256="0w76zcl8mfgd7d4njhh0k473hagf9ndcadnnjd35c94ym98jja33"; depends=[]; }; mix = derive2 { name="mix"; version="1.0-9"; sha256="08729y6ih3yixcc4a6m8fszg6pjc0s02iq47339b9gj16p82b74z"; depends=[]; }; - mixAK = derive2 { name="mixAK"; version="4.2"; sha256="0z96ddlvkpr4y2chi929ik81snsr0f03a0k4cnh0q1lx0lr51p1z"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; - mixOmics = derive2 { name="mixOmics"; version="5.2.0"; sha256="0s7g09b0pdfzc255sicpvkac2c28yhvipf6284qbpgrr80qc9s5p"; depends=[corpcor ellipse ggplot2 igraph lattice MASS rgl]; }; + mixAK = derive2 { name="mixAK"; version="4.4"; sha256="0aj1x80kxwksn7as6lfncl6ar218hnbcs8vbxwiqp1lh4il74iiq"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; + mixOmics = derive2 { name="mixOmics"; version="6.1.1"; sha256="0wdl5g0455whlf331j77c0d9vk6qyb03basy5b7svz3zrg15q2qa"; depends=[corpcor dplyr ellipse ggplot2 igraph lattice MASS plyr RColorBrewer reshape2 rgl tidyr]; }; mixPHM = derive2 { name="mixPHM"; version="0.7-2"; sha256="1wvkdb9zj2j8dpppnyins05rg877zbydqsl3qaan62wznkknxcac"; depends=[lattice survival]; }; mixRasch = derive2 { name="mixRasch"; version="1.1"; sha256="1r067pv7b54y1bz8p496wxv4by96dxfi2n1c99gziqf5ramx3qzp"; depends=[]; }; mixcat = derive2 { name="mixcat"; version="1.0-3"; sha256="0xszngygd3yj61pvv6jrrb5j0sxgpxzhlic69xrd5mv5iyw0cmxd"; depends=[statmod]; }; mixdist = derive2 { name="mixdist"; version="0.5-4"; sha256="100i9mb930mzvdha31m1srylmpa64wxyjv6pkw1g5lhm1hsclwm3"; depends=[]; }; mixedMem = derive2 { name="mixedMem"; version="1.1.0"; sha256="0j8w3qfhanyrkkxipdxfdajv15qba8r2rm06iiv3kywficzgkxgv"; depends=[BH gtools Rcpp RcppArmadillo]; }; + mixedsde = derive2 { name="mixedsde"; version="2.0"; sha256="04ljpy2vyqyin9b1zn0awp43c33ch6zsgdrp6whii1ql9pcinkcl"; depends=[MASS moments plot3D sde]; }; mixer = derive2 { name="mixer"; version="1.8"; sha256="1r831jha7qrxibw5m3nc3l6r887ihzxzsj65yjnbl5cf5b8y19bb"; depends=[]; }; - mixexp = derive2 { name="mixexp"; version="1.2.3"; sha256="1cywqqiap4czni2jlcfyh6l6sn6v6wb2bzkfavbg2h6f5xc3ljnn"; depends=[daewr gdata lattice]; }; - mixlm = derive2 { name="mixlm"; version="1.1.1"; sha256="1ffrkfksli9zwk5cdjc1q7xqvmwbpkxjbzrbpvj1ays9yrhvgkxb"; depends=[car leaps lme4 multcomp pls pracma]; }; + mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; + mixlink = derive2 { name="mixlink"; version="0.1.4"; sha256="138q48k9bz7dc18fdi6g7ra10b08avwa7xnvw7i8f1fdjk6h2zpc"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; + mixlm = derive2 { name="mixlm"; version="1.1.5"; sha256="17ph8a7p9jq7529vvbxb77m6hwscwgamzsm6a9v71cvqkvc5lkmr"; depends=[car leaps lme4 multcomp pls pracma]; }; mixor = derive2 { name="mixor"; version="1.0.3"; sha256="1qnrfd0hggad81rn8ryfm9l0cpd59ifj9sxc1bav35bma535azdv"; depends=[]; }; - mixpack = derive2 { name="mixpack"; version="0.3.4"; sha256="0d28yxxm8rcb8l9nzpaviz4gxm690f88d3z21sc3qg02qdh3xqk0"; depends=[mvtnorm Rcpp RcppArmadillo]; }; + mixpack = derive2 { name="mixpack"; version="0.3.6"; sha256="0q19mal86qlriwilabgy3sn33iymi5hl3wa33kvb8cd1dgdmjr7a"; depends=[mvtnorm Rcpp RcppArmadillo]; }; mixreg = derive2 { name="mixreg"; version="0.0-5"; sha256="0wsb1z98ymhshw9nhsvlszsanflxv3alwpdsw8lr3v62bkwka8zr"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; - mixsmsn = derive2 { name="mixsmsn"; version="1.1-1"; sha256="0n2iib0kpnsgz2k761myjqy2zsw0yrygpamxgm90cvngvxvkmkhc"; depends=[mvtnorm]; }; + mixsmsn = derive2 { name="mixsmsn"; version="1.1-2"; sha256="02hincq7bflmyvdahjmkcdpr6vwxjw5hrbvld38riwv2kw4wmn4l"; depends=[mvtnorm]; }; mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; mixtools = derive2 { name="mixtools"; version="1.0.4"; sha256="133rr17ywmlhsc6457hs8qxi8ng443ql9ashxpwc8875gjhv1x32"; depends=[boot MASS segmented]; }; - mixtox = derive2 { name="mixtox"; version="1.2"; sha256="0yw3zvgxmrwcnps9zws87z9p4jk8gblr0giwh9298ngpcv4dd3rs"; depends=[nls2]; }; + mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; mixture = derive2 { name="mixture"; version="1.4"; sha256="0k9pzcgfjyp0rmcma26kr2n8rcwmijznmdpvqidgl3jay20c87ca"; depends=[]; }; mizer = derive2 { name="mizer"; version="0.2"; sha256="0cpal9lrjbvc923h499hbv4pqw3yjd4jvvhgayxgkak2lz2jzmcz"; depends=[ggplot2 plyr reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="0.9-41"; sha256="02vndwaypvc61zry3w7s8av53ha1bkb19rgkm235znh16sgjdwbd"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; + mkin = derive2 { name="mkin"; version="0.9.45"; sha256="0p47xaxyakah4qwkymzc4qvs9i9g764laikw9vlmjyjv0j0zn9cx"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; - mlVAR = derive2 { name="mlVAR"; version="0.1.0"; sha256="0xychak3xdqnsl9z1ifi0niqsrdc10f6frl6zg162mzpil33wp3g"; depends=[arm lme4 plyr qgraph]; }; + mlVAR = derive2 { name="mlVAR"; version="0.3.2"; sha256="07jxggh5qds0b7by61m1xiyx3lxffpgzl3knk97q8fafw46dg1r4"; depends=[abind arm clusterGeneration corpcor dplyr lme4 mvtnorm plyr qgraph]; }; mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; mldr = derive2 { name="mldr"; version="0.3.22"; sha256="0q5dpqx6zapawjjq8rqk112w5qsk7r6sc90y63yvllk9yhdgygyw"; depends=[circlize shiny XML]; }; mldr_datasets = derive2 { name="mldr.datasets"; version="0.3.15"; sha256="1xivwmv6hvl026c5ymc23fr36sk797dxn2wa9lp20dgh5s0cq10n"; depends=[]; }; + mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; mlegp = derive2 { name="mlegp"; version="3.1.4"; sha256="1932544irhzhf6a8rjyh66j57h9awlhwd6xam603bamfg106cmg2"; depends=[]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-6"; sha256="0mvmahnbbp478xwldj4wlsjib4v4afhs07643gxgcqpi56zbd5h7"; depends=[lme4]; }; - mlma = derive2 { name="mlma"; version="2.0-0"; sha256="1wkkvbix1sycaxss4hy1y6k8r5wm1s38fbjis07slr8hpkvskmv6"; depends=[lme4]; }; + mlma = derive2 { name="mlma"; version="4.0-1"; sha256="0pk2h4m74r95dfkqzliixi6z1rwdfc6gbz8c3162y22m919f00vc"; depends=[car gplots lme4]; }; + mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="0.2-4"; sha256="15ndly7i56k8blgvpn15ixxnqx9yvbci7n3mb3hm9mnrxwh5v7sx"; depends=[Formula lmtest MASS maxLik statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; - mlr = derive2 { name="mlr"; version="2.8"; sha256="1826lvnz5z9j7im66m8hg6dzrjipyygylhj0whyrskjsgz98wili"; depends=[BBmisc checkmate ggplot2 ggvis parallelMap ParamHelpers plyr reshape2 shiny survival]; }; + mlr = derive2 { name="mlr"; version="2.10"; sha256="1brylz7x10wyi0k4cdh9qkjv73yz8g67ib8flzw9dcd9i15ppgbv"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="0.0-30"; sha256="0r4xfjlyrixs9mjbgag72qkv7nqf9vq2qy8drdfybwg69d763wap"; depends=[basefun BB numDeriv quadprog sandwich variables]; }; - mlt_docreg = derive2 { name="mlt.docreg"; version="0.0-30"; sha256="1gbidyjq0bdg5mmlx6aivlm1j22ddwlc1q6r7h3pq6ri7yzmmaxw"; depends=[mlt numDeriv]; }; - mlxR = derive2 { name="mlxR"; version="2.2.0"; sha256="1ca0vfky45gvr2rqbgli79v1mqhi0d8mpd220xxs1p6xlwbyvn0m"; depends=[ggplot2 Rcpp XML]; }; - mma = derive2 { name="mma"; version="2.0-4"; sha256="1c8jbgb3nsrfrdbbj85qkabz497qrwvk6ddzxm985hq50kfpbxv0"; depends=[gbm]; }; - mmand = derive2 { name="mmand"; version="1.3.0"; sha256="134fqkdysxdg7r7syv0d3yffvmgdjhm91ywh39i955ldprbh4qbv"; depends=[Rcpp RcppEigen reportr]; }; + mlt = derive2 { name="mlt"; version="0.1-2"; sha256="0z7gvg31by1xbw6yqxfs2hvfw7l0392gsrislah05bjay482b01q"; depends=[basefun BB numDeriv quadprog sandwich variables]; }; + mlt_docreg = derive2 { name="mlt.docreg"; version="0.1-4"; sha256="15gc27rgw728f005wriik3dixw4f38krjg0zy0fx5macij3fbc7z"; depends=[mlt numDeriv]; }; + mltools = derive2 { name="mltools"; version="0.2.0"; sha256="0q7k4gkvswlkvjjvjpaw72cx7wjb26yjpap1yqbdq9b3gq32w02j"; depends=[data_table Matrix]; }; + mlxR = derive2 { name="mlxR"; version="3.1.0"; sha256="1xdv7s6li1kwn8m4dnhz18rhmhv13y128npcfmfka646l0p5g1r9"; depends=[ggplot2 Rcpp XML]; }; + mma = derive2 { name="mma"; version="4.0-0"; sha256="1dj9z9brmqrfl4ah27cjwksh16b6nww033wwf741hiadr5jl13pn"; depends=[car gbm gplots survival]; }; + mmand = derive2 { name="mmand"; version="1.4.1"; sha256="1gkn0dhfffsa2bsrm6wy21l1w17x6h3znfn4a8s8yvgggwnq4030"; depends=[Rcpp reportr]; }; mmap = derive2 { name="mmap"; version="0.6-12"; sha256="12ql03wzwj23h8lwd07rln6id44mfrgf9wcxn58y09wn3ky1rm6a"; depends=[]; }; mmc = derive2 { name="mmc"; version="0.0.3"; sha256="03nhfhiiadga8mcp33kj20g33v9n5i62fdqgi20h5p80g849k719"; depends=[MASS survival]; }; mmcm = derive2 { name="mmcm"; version="1.2-6"; sha256="0lk2lk8j4hq6shw3vpq53gvh2w1gwkayvgfny4i04k5fglbwivg7"; depends=[mvtnorm]; }; @@ -5554,13 +6929,18 @@ in with self; { mmeta = derive2 { name="mmeta"; version="2.2"; sha256="06zkazi97f3il2vlx4f8c7zz4kxs9ylhscd06j31h504c1w96ddf"; depends=[aod HI]; }; mmm = derive2 { name="mmm"; version="1.4"; sha256="1nydian004nldqhyw3x15w6qfml2gkjc0x8ii54faz563byjv3d8"; depends=[gee]; }; mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; }; - mmod = derive2 { name="mmod"; version="1.3.1"; sha256="1srk46m95kh0y25nw53z671dd7zbmrfnfn7gmhnzxvc6dq0wvshh"; depends=[adegenet pegas]; }; + mmod = derive2 { name="mmod"; version="1.3.2"; sha256="1yq3cvkfsqmiiqqzyisfiyzfcd2jdp7xv19rydpqaq4qb6322ljg"; depends=[adegenet pegas]; }; + mmpf = derive2 { name="mmpf"; version="0.0.2"; sha256="0cw45rfrcb2f3ghfkkxm3gzdms7mn7rl4gmqnr4jbxyqca263aza"; depends=[checkmate data_table]; }; mmpp = derive2 { name="mmpp"; version="0.4"; sha256="120ciyd9c6zwbdvzcpasb1476d0i9h28a1a5c99z3zar8lpp184p"; depends=[]; }; mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; }; mmtfa = derive2 { name="mmtfa"; version="0.1"; sha256="113bpcb05i78y78byrdn9j45dfcar7q8z7qmlid8cl6b8cjv1vfz"; depends=[matrixStats mvnfast]; }; - mnlogit = derive2 { name="mnlogit"; version="1.2.4"; sha256="0s7pp3qflnscs0z9fjvnl6rh5j92jnpksqli65gmrqwbqp3md8i8"; depends=[Formula lmtest mlogit]; }; + mnis = derive2 { name="mnis"; version="0.2.1"; sha256="0jacjwz68667k5066v6lv1dhw946mjnvff53j2l8vdsxzm34hbc6"; depends=[httr jsonlite plyr]; }; + mnlogit = derive2 { name="mnlogit"; version="1.2.5"; sha256="0vwragk71hisz7dy4h5i6zl9yp6wvzwlnfyw2kprnd94y02laq63"; depends=[Formula lmtest mlogit]; }; mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; - mnormt = derive2 { name="mnormt"; version="1.5-4"; sha256="0dr8lm1yjh5rwfjn8bjpxaklcym7alqda0nwrjmp6pvqf09wmvl8"; depends=[]; }; + mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; }; + mockery = derive2 { name="mockery"; version="0.3.0"; sha256="1ydgxqdzwn68b84a7557nasgm1r5jk2mivzwq9x71p7zwqf4c8vd"; depends=[testthat]; }; + mod09nrt = derive2 { name="mod09nrt"; version="0.14"; sha256="1wn1y33bj9r712l0f063j5gcl423anjzmvgfy0ddihcrbpz4l7a0"; depends=[]; }; + modEvA = derive2 { name="modEvA"; version="1.3.2"; sha256="0p41fl0k780rx1vmq9laknz01ar6507sj8ss8kphrqkjnymsi2a0"; depends=[]; }; modMax = derive2 { name="modMax"; version="1.1"; sha256="1mx4623az7vzaqf530pklx7j92qwwq93pa2416lnr24jjcxgva2h"; depends=[gtools igraph]; }; modQR = derive2 { name="modQR"; version="0.1.1"; sha256="1dc04wrax73f6fzkl6ycsa3wzf5347h79ah3vy3m24f4hjncnffw"; depends=[geometry lpSolve]; }; modTempEff = derive2 { name="modTempEff"; version="1.5.2"; sha256="00xdvc0i3p8wq913giy44w0xz07sa4bdgqpi7pmpbv2c5wj30pk1"; depends=[mgcv]; }; @@ -5568,116 +6948,141 @@ in with self; { modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; modelObj = derive2 { name="modelObj"; version="1.0"; sha256="0r4smak9hni9pzih4nzkpv3bq18acrsmmxs1a13wq3pgjfvkwa63"; depends=[]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; + modelr = derive2 { name="modelr"; version="0.1.0"; sha256="1vrhszix1kq5p02i044vjlbpmkdgn6ifg1jk00if7bn33sb872vy"; depends=[broom dplyr lazyeval magrittr purrr tibble tidyr]; }; modeltools = derive2 { name="modeltools"; version="0.2-21"; sha256="0ynds453xprxv0jqqzi3blnv5w6vrdww9pvd1sq4lrr5ar3k3cq7"; depends=[]; }; modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; }; modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; }; moduleColor = derive2 { name="moduleColor"; version="1.08-3"; sha256="183l968l49b7jbmvsjjnmk1xd36cpjkp777c00gw1f73h6nb2na8"; depends=[dynamicTreeCut impute]; }; - modules = derive2 { name="modules"; version="0.3.0"; sha256="0xbkzjs2960p92k0qx7gi7wgiwqvr76bwa75csxghjr79w41yr4q"; depends=[aoos stringr]; }; + modules = derive2 { name="modules"; version="0.5.0"; sha256="1dwvwdfshhdv7fk346l8czbkq0f1im0xfci3pzzinkdlfi3m0h2a"; depends=[stringr]; }; + modygliani = derive2 { name="modygliani"; version="1.0"; sha256="01g96cdm4hgbsh6xsdfjg7vp7zb138sxwgv0msrlm27a6p4fcnlx"; depends=[]; }; + moezipfR = derive2 { name="moezipfR"; version="1.0"; sha256="192gmn591g7fn0v2kp6i20rpziyf81mgq1gqwvwsrcc7lnbgrw04"; depends=[numDeriv tolerance VGAM]; }; mogavs = derive2 { name="mogavs"; version="1.0.1"; sha256="1bzjrcisbg0fb8kj8x9ngd9i1nrhif1rdacz6nrny6xrmw0m3ckp"; depends=[cvTools]; }; - mokken = derive2 { name="mokken"; version="2.7.7"; sha256="1v0khh1bb2h7j2x54mdw8vqlimhw25r2ps89hw4l88qfaz05ir77"; depends=[poLCA]; }; - molaR = derive2 { name="molaR"; version="2.1"; sha256="1425m138vsx42hp8kfa93ac5y0hs7zzb8lr4nmxx9jbbrva11lfp"; depends=[alphahull geomorph psych rgl Rvcg]; }; - mombf = derive2 { name="mombf"; version="1.6.1"; sha256="16agh7lclkx3709cll3mgnm4bby8m5sscizblw1m5hjmld4d4mjm"; depends=[actuar mgcv mvtnorm ncvreg survival]; }; - momentchi2 = derive2 { name="momentchi2"; version="0.1.0"; sha256="02k4hzhqmqh7sx7dzb6w84fc1f5523md3284y4gvdbaw9y34ayk8"; depends=[]; }; + mokken = derive2 { name="mokken"; version="2.8.4"; sha256="1c3jjsbs8wp2z701y9qmr6v6q90achlchpbfwf31skj6bg2y85zm"; depends=[poLCA]; }; + moko = derive2 { name="moko"; version="1.0.0"; sha256="0nsj83hn0kflsw15ghw6b5zjsd875vj9vj7i0ag67cn2n82yncb5"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; }; + molaR = derive2 { name="molaR"; version="4.2"; sha256="1xz4vfb9rkw731cxjqvh7hpcm2lly9hmxp951il536gwb665jh1j"; depends=[alphahull rgl Rvcg]; }; + mombf = derive2 { name="mombf"; version="1.8.3"; sha256="0pbbklhvc4hlw2rpf4vg0p8c9bcq2cd5yxm6x6sbqdf3709ffy6j"; depends=[actuar mgcv mvtnorm ncvreg survival]; }; + momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; - mongolite = derive2 { name="mongolite"; version="0.8.1"; sha256="103flzk27vb69m02d7v7xp67yvzprffqmz7kha07vb9wya5xrlrr"; depends=[jsonlite]; }; - monitoR = derive2 { name="monitoR"; version="1.0.4"; sha256="1ai99lim84nc14ls2jlfflvqm67bgaqb373k9wah83gpq35wdksc"; depends=[tuneR]; }; + mongolite = derive2 { name="mongolite"; version="0.9.1"; sha256="1hy36bh9klhdj2yxr3b2rl101lsgfgw61l5zn08brvvh04zvfv31"; depends=[jsonlite openssl]; }; + monitoR = derive2 { name="monitoR"; version="1.0.5"; sha256="1rqcdg4gha5vh3dvxqzr2albi2capm18rkgf79rd769hrk3z09l5"; depends=[tuneR]; }; + monkeylearn = derive2 { name="monkeylearn"; version="0.1.1"; sha256="1w0d4cvd1y3wal8r0hg8w08x1zqzkv7ag8nyplmkqv9vwc15qd26"; depends=[digest httr jsonlite tibble]; }; monmlp = derive2 { name="monmlp"; version="1.1.3"; sha256="1f42d8j6jxz8x3yy02ppimbza3b3dn8402373qhj4yizrfk9wkz9"; depends=[]; }; monogeneaGM = derive2 { name="monogeneaGM"; version="1.1"; sha256="0fbz26jx05xmna799s086khy6j8xbvv91vh544npd49isnag1v6v"; depends=[ape circular cluster geomorph gplots phytools rgl]; }; - monographaR = derive2 { name="monographaR"; version="1.01"; sha256="1qrgdbwj9y0glhb74l6smhf1g387dq0n3hf06irysxb7a3ypvkki"; depends=[circular maptools png raster rmarkdown sp]; }; - monomvn = derive2 { name="monomvn"; version="1.9-6"; sha256="1iisnwgqkh2svrmzd8r4qh8jm4l664ws795jkp3dgx0dadxjqhj6"; depends=[lars MASS mvtnorm pls quadprog]; }; + monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; }; + monomvn = derive2 { name="monomvn"; version="1.9-7"; sha256="1bz967sl6ji84x9v0fypjn75d39naaqgvw31n9lgcd5lyj39hbsk"; depends=[lars MASS mvtnorm pls quadprog]; }; monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; }; moonBook = derive2 { name="moonBook"; version="0.1.3"; sha256="1wy8qwzymh482gfb4v9v74k666mq8dz2yird7gz43l3hps22kfgb"; depends=[nortest survival]; }; moonsun = derive2 { name="moonsun"; version="0.1.3"; sha256="1y8mwxmcy4iz444c2fayyi4i0jk1k561dp6cbjg2b3lmdml0whmi"; depends=[]; }; mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; }; morgenstemning = derive2 { name="morgenstemning"; version="1.0"; sha256="17y90cf8ajmkfwla0hm4jgkbkd1mxnym63ph2468sfxkhn0r3v88"; depends=[]; }; - morse = derive2 { name="morse"; version="2.1.1"; sha256="1l2rgkjvpdsz8cqqppgd5565mz4dgl7w5wcdgrkm1hy493989069"; depends=[coda dplyr ggplot2 gridExtra rjags stringr]; }; - mosaic = derive2 { name="mosaic"; version="0.13.0"; sha256="0rf88124rcc191rr9y3kawakh0b9f94203nllxyr3a4mb4lkk4vk"; depends=[car dplyr ggdendro ggplot2 gridExtra lattice latticeExtra lazyeval MASS mosaicData readr reshape2]; }; - mosaicData = derive2 { name="mosaicData"; version="0.13.0"; sha256="19f35674accaqs6yqqyn9y8ggj1qhz5w3na0815768mlb91gy2j8"; depends=[]; }; - moult = derive2 { name="moult"; version="1.4"; sha256="0nglf7wijp2v66fpyh88glbn1glp8vvkbvpc1g6136bg6ahbbkkl"; depends=[Formula Matrix]; }; + morse = derive2 { name="morse"; version="2.2.0"; sha256="0l52hwhbspf1d6wi0qnwgwjjc1kkixkfdsf81jvwshnxbci4s3kw"; depends=[coda dplyr epitools ggplot2 gridExtra reshape2 rjags stringr]; }; + mosaic = derive2 { name="mosaic"; version="0.14.4"; sha256="0dvlykr05jjpnjcvkffmjpc83bnbvg7i5zkjr2y1c7h16hy9d5wz"; depends=[dplyr ggdendro ggplot2 gridExtra lattice latticeExtra lazyeval MASS Matrix mosaicData readr tidyr]; }; + mosaicData = derive2 { name="mosaicData"; version="0.14.0"; sha256="0f092wp2lpj8rk6r2bd5mxp4q3n7ia9h838z8prrz56vwh3gbpw0"; depends=[]; }; + mosaicQA = derive2 { name="mosaicQA"; version="1.2.0"; sha256="0ddgvvw679pg7lixyxqxqi8pzyy03w6h4z5cas09m2m16nz2nr2f"; depends=[gplots psych]; }; + moult = derive2 { name="moult"; version="2.0.0"; sha256="177fhi3f5qsg2k4qb1cgviq96aln80qwri1hf9yym6wrzn8crj7r"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.1"; sha256="1l3m7jgq70g83mmfhlwzj5gkdnwgl14g9ljpk6j7z7qxapzva3bb"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; - mousetrap = derive2 { name="mousetrap"; version="1.0.0"; sha256="1zmgf2adhzrdpmh5hx44z8wyjrkg9s3qjcwh18ljiivn8i7fgs7n"; depends=[diptest ggplot2 pracma psych reshape2 scales]; }; - movMF = derive2 { name="movMF"; version="0.2-0"; sha256="1p9ay7w93gyx4janw23iwg2j0wkvnvzalaa20n1rlahhmh327g7i"; depends=[clue skmeans slam]; }; - move = derive2 { name="move"; version="1.6.541"; sha256="13dil2avb7mf45qxrgwbl56ll0zbz007hz74crjlc045x24b0nlx"; depends=[geosphere httr raster rgdal sp]; }; - moveHMM = derive2 { name="moveHMM"; version="1.1"; sha256="05za2lb7s0kvvzm8a85qm3wf0qi3wvs9x5mwir8k5bhj1kav2imp"; depends=[boot CircStats MASS Rcpp RcppArmadillo sp]; }; - mp = derive2 { name="mp"; version="0.3.1"; sha256="0hwn0dg0k7nhl0jv680q5z9v46mfknndp5xswyl5chkw4ppmnyf2"; depends=[Rcpp RcppArmadillo]; }; + mousetrap = derive2 { name="mousetrap"; version="3.0.0"; sha256="06xadwhcpvqji2qdg2a9xnwq5n3qnyfhziifaaargpzzaz25nvmf"; depends=[cstab diptest dplyr fastcluster ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; + movMF = derive2 { name="movMF"; version="0.2-1"; sha256="1yrjz76bwhziwdj2xdibr3lxcka4nq32b6rq3m9q0vkv9gspmw6v"; depends=[clue skmeans slam]; }; + move = derive2 { name="move"; version="2.1.0"; sha256="1dk83wdfwmxwr6zhy574h9n95kss0b0bprqd20gwwfk27mfjmc8h"; depends=[geosphere httr raster Rcpp rgdal sp]; }; + moveHMM = derive2 { name="moveHMM"; version="1.3"; sha256="1idna90fw1i8g8cnhzxnqvb6bh8w51h426ngknrv8bh1skl09fck"; depends=[boot CircStats ggmap ggplot2 MASS Rcpp RcppArmadillo sp]; }; + moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.1"; sha256="020bl3i0i393dfknix03k8y70fjsf0lbw0mqrnhwsvz8kwrw3hi1"; depends=[move Rcpp]; }; + mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; mpMap = derive2 { name="mpMap"; version="1.14"; sha256="0gmhg5ps8yli8699a5aw26skfbjxx4zpp0paqxxdc0zl28l0pdff"; depends=[gdata qtl seriation wgaim]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; - mpath = derive2 { name="mpath"; version="0.2-1"; sha256="1419grr2baqw0m5fv17pcrxxwbax91savnzrg98b7xrs9cqnq97y"; depends=[doParallel foreach glmnet MASS numDeriv pscl]; }; + mpath = derive2 { name="mpath"; version="0.2-4"; sha256="0razmc8cvalcv6ibkfh2snc6vyiwl20zpawx0yp261qhn8gkr5js"; depends=[doParallel foreach glmnet MASS numDeriv pscl]; }; mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; + mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; }; mph = derive2 { name="mph"; version="0.9"; sha256="11wcy23sv8x7aq6ky8wi0cq55yhjkkm9hn672qy803dwzzxv5y61"; depends=[]; }; - mplot = derive2 { name="mplot"; version="0.7.7"; sha256="052idykpv2362mmqvf9zcr1s383hjfgigwhhdxn9a4azdf8djzh0"; depends=[bestglm doParallel foreach glmnet googleVis leaps plyr shiny shinydashboard]; }; + mplot = derive2 { name="mplot"; version="0.7.9"; sha256="10syv0wibqyzgjhkya2chpb2izhk2b6aibj5wvgypvr7zyjhd5f8"; depends=[bestglm doParallel dplyr foreach ggplot2 glmnet glmulti googleVis leaps plyr reshape2 scales shiny shinydashboard]; }; mpm = derive2 { name="mpm"; version="1.0-22"; sha256="0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"; depends=[KernSmooth MASS]; }; mpmcorrelogram = derive2 { name="mpmcorrelogram"; version="0.1-3"; sha256="0qgzsh744002whh3v1hrxs1i0xnk9zgfgkdgx2f0ffj00vvnwr97"; depends=[vegan]; }; - mpmi = derive2 { name="mpmi"; version="0.41"; sha256="1iwdhvdglsamzq18f0r5mh0anrd4ffrddafdlbw16kr8jy0c8fdn"; depends=[KernSmooth]; }; - mpoly = derive2 { name="mpoly"; version="1.0.0"; sha256="1y8hx97hxhfsik4sikdlmrp2p05xywjqw1fx77rb1s6j97k3kbnk"; depends=[ggplot2 orthopolynom partitions plyr polynom reshape2 rJava rjson rJython rSymPy stringr]; }; + mpmi = derive2 { name="mpmi"; version="0.42"; sha256="1j7xsgz3pgbb7a4ykrcj22isbi5svqsxcckai05q7b401h1ppsnh"; depends=[KernSmooth]; }; + mpoly = derive2 { name="mpoly"; version="1.0.3"; sha256="1wcpr7dps1cnl3x46703an9cjb3srz62wvafdsj2i0dazs6dq4sa"; depends=[ggplot2 orthopolynom partitions plyr polynom stringr tidyr]; }; mppa = derive2 { name="mppa"; version="1.0"; sha256="06v6vq2nfh4b407x2gyvcp5wbdrcnk3m8y58akapi66lj8xplcx4"; depends=[]; }; - mpt = derive2 { name="mpt"; version="0.5-2"; sha256="16rrcy8hy9fw603pbi9wybnql11w0bxlxi1kxx482khg9fj7lwn0"; depends=[]; }; + mpr = derive2 { name="mpr"; version="1.0.4"; sha256="13fqvndwxzqa1safa43ad90pkiqnpqmgr0pkwp8lwmnxqmrmj0jb"; depends=[survival]; }; + mpt = derive2 { name="mpt"; version="0.5-4"; sha256="01akz72z6z5ybzika120v4v6ah13hfynh98rzbmqgbchijxbbkz6"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; - mrMLM = derive2 { name="mrMLM"; version="1.1"; sha256="0gcn43vjy4mjchklwpmda1r2pbnga6gadcw3fllv7483jjrk4g80"; depends=[gWidgets gWidgetsRGtk2 qqman RGtk2 RGtk2Extras]; }; + mrMLM = derive2 { name="mrMLM"; version="2.1"; sha256="0ip8xd2dj6d4hxq18pf4j6mk4yl00ajci72rr485wk94cr0zj5hy"; depends=[ggplot2 gWidgets gWidgetsRGtk2 lars MASS ncvreg openxlsx qqman RGtk2 RGtk2Extras stringr]; }; mra = derive2 { name="mra"; version="2.16.4"; sha256="134fw4bv34bycgia58z238acj7kb8jkw51pjfa2cwprrgsjdpf5g"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.3.17"; sha256="0a2pn4234ri5likaqbxgkw8xqmwchr6fak3nninral0yzd4rcal5"; depends=[mvtnorm]; }; - mrds = derive2 { name="mrds"; version="2.1.14"; sha256="0lvr9zqyi45a100w31k228b03plna24rzgamsvfa34inyd8q4y9m"; depends=[mgcv numDeriv optimx Rsolnp]; }; + mrds = derive2 { name="mrds"; version="2.1.17"; sha256="1vs9fldk9gcwvd1acwswzvblnkdm4bv3jmaamlrp3ik6vyd6xjvv"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; + mregions = derive2 { name="mregions"; version="0.1.4"; sha256="1xlgbjm339wr2rs5i6ddyp1lmfgzjb53gw44c3cj1x5qx1jrp7b1"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; + mrfDepth = derive2 { name="mrfDepth"; version="1.0.2"; sha256="0byfcny476zmf11h5aynwix4fshy22aymrw93kybmpvffscjvq3x"; depends=[geometry ggplot2 matrixStats Rcpp RcppEigen reshape2]; }; mri = derive2 { name="mri"; version="0.1.1"; sha256="07lqr9fv0nqd626jpqa6x1qxf85r1j4r5brv760dll1p2kl060gw"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-0"; sha256="1344x7gc7wvmcqp0sydppavavvps5v7bs0dza2fr8rz3sn4as8sa"; depends=[lattice misc3d oro_nifti]; }; - ms_sev = derive2 { name="ms.sev"; version="1.0.2"; sha256="169z9x8jv06rv1b3qh4nynzwq5zhqq3j5r6k1azygsc2wzpzm039"; depends=[]; }; - msBP = derive2 { name="msBP"; version="1.0-2.1"; sha256="1yprhglqykh6v2jicab25a0ny1r49kaj3i04fspi3was2md2qbzd"; depends=[DPpackage]; }; + ms_sev = derive2 { name="ms.sev"; version="1.0.4"; sha256="1sr2rgiskgwjhwif70qj6ga8i8kg4bh342hff66b2a54rxrchmw5"; depends=[]; }; + msBP = derive2 { name="msBP"; version="1.2"; sha256="1sp8njnvv42q8fkcsjzpfg9p9dzz0hjsn2a6b9kfaymx7zvks2sq"; depends=[DPpackage]; }; msSurv = derive2 { name="msSurv"; version="1.2-2"; sha256="02qm3mq17d2yj5mbz6gapd3zfi1wmiad5hpyimcb39impk43n2hf"; depends=[class graph lattice]; }; + msaFACE = derive2 { name="msaFACE"; version="0.1.0"; sha256="1lh8crz507nlddm946lmn73xbnsh4cs0kg238ysnsvxs726c83fs"; depends=[]; }; + msaR = derive2 { name="msaR"; version="0.1.0"; sha256="0krfass51686ki4wv8nj3kipgsv1v3rs5n6wcdyyqyd1ni8j7mr2"; depends=[ape htmlwidgets]; }; + msaenet = derive2 { name="msaenet"; version="2.4"; sha256="045f38fzlxsawsssyvp7122dc44hvzyha05js7xzb5zg1pq0i1qv"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; msarc = derive2 { name="msarc"; version="1.4.5"; sha256="1jv364502m6q2w039dmdhwsx5id39jc4xcabyrbwbrgy65kwfspg"; depends=[AnnotationDbi gplots RColorBrewer wordcloud XLConnect]; }; + mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; + mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; }; - msgl = derive2 { name="msgl"; version="2.2.0"; sha256="1k1kmgz8h5irdfjja0gcig2z6icwzcnzv1z9l0halcpfb1b2n36f"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; + msgl = derive2 { name="msgl"; version="2.3.5"; sha256="0lihvgh86r3swfma6msjbsmfc14b1p1h16v6pkd53v5q3dp4asld"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; msgps = derive2 { name="msgps"; version="1.3"; sha256="0nvxy9a41z5d111gqr1gh521imm795l1li70g1mzrag1gpg810c5"; depends=[]; }; - msir = derive2 { name="msir"; version="1.3"; sha256="0d7zxjmhr1ri3qz3fdkf56fi5dz2p9lb2vyqccrpn7js2ibkqhpl"; depends=[mclust]; }; + msgtools = derive2 { name="msgtools"; version="0.2.4"; sha256="1m0a6f2q23jm4nl6sp1ympqkiv478q8hgdn5wjfg6gx0nij29jmk"; depends=[devtools digest hunspell poio tibble]; }; + msir = derive2 { name="msir"; version="1.3.1"; sha256="1ipzgdffsqly3dp91pw7yp3h5cwn08l9qsj7cdmrykd42jc98950"; depends=[mclust rgl]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; - msm = derive2 { name="msm"; version="1.6.1"; sha256="192s01amh5q0z65ik2vsika9x81iqjjqabr3jczm5app0phx9i72"; depends=[expm mvtnorm survival]; }; + msm = derive2 { name="msm"; version="1.6.4"; sha256="0h0h9cgavpylbj9692750if1hw7qylhsad549fqjx5l0zqbh3zhy"; depends=[expm mvtnorm survival]; }; msma = derive2 { name="msma"; version="0.7"; sha256="0rrxxva71j8gk25hi6hycnyrhrdc0skcaj1bnmh029cqhjl3qma5"; depends=[mvtnorm]; }; msme = derive2 { name="msme"; version="0.5.1"; sha256="1bkj10pgmv9q61384fwd2pxccclclc3knc5x212p42w4w49hnm1q"; depends=[lattice MASS]; }; + msmtools = derive2 { name="msmtools"; version="1.2"; sha256="0pci771mkz9zaf5dbpd9lddpyfffimwsa3mql2z5sbx2xlrycvqj"; depends=[data_table msm survival]; }; msos = derive2 { name="msos"; version="1.0.1"; sha256="0fbxi8x83sj8a6bahc7q28vql00pxqdia2vxb6ilsc459xaph6vc"; depends=[mclust tree]; }; msr = derive2 { name="msr"; version="0.4.4"; sha256="1r7kzicyi380xylw4vl88918gqmvs875f3rssx57yg28swb93sv0"; depends=[colorspace e1071 glmnet RColorBrewer rgl]; }; - mstate = derive2 { name="mstate"; version="0.2.9"; sha256="0yp7dfbp711if1n32hmz56ycn0f1bblhajf0w04mw8yicad7ri7n"; depends=[RColorBrewer survival]; }; - mtconnectR = derive2 { name="mtconnectR"; version="0.2.0"; sha256="0gznqcgm5zrmww3zwb09rgfn3fhzj62a4q8c1jd3833vnlikbalj"; depends=[data_table dplyr plyr stringr XML]; }; + mstate = derive2 { name="mstate"; version="0.2.10"; sha256="14namzs0s7v28xkj1pidccjpxg7570fdqhd64rihvyv1r7ybfyav"; depends=[RColorBrewer survival]; }; + mtconnectR = derive2 { name="mtconnectR"; version="1.0.1"; sha256="151gybpl7d44syk7xclyhy169na58lab7l5vynrf1ark79xidwa3"; depends=[data_table dplyr dtw ggplot2 magrittr plyr proxy stringr tidyr XML]; }; mtk = derive2 { name="mtk"; version="1.0"; sha256="0vq2xlxf86l92fl91qm8m4yfjyz1h8szmwxiics7sc9f0as0dkmy"; depends=[lhs rgl sensitivity stringr XML]; }; mtsdi = derive2 { name="mtsdi"; version="0.3.3"; sha256="1hx4m1jnfhkycxizxaklnd9illajqvv1nml8ajfn3kjmrb5z7qlp"; depends=[gam]; }; muRL = derive2 { name="muRL"; version="0.1-10"; sha256="0411vqijsida63jq63qwflr6lvv0rr777z0xba6pn0gpi6khjqqz"; depends=[maps]; }; muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; }; + muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; }; muhaz = derive2 { name="muhaz"; version="1.2.6"; sha256="1b7gzygbb5qss0sf9kdwp7rnj8iz58yq9267n9ffqsl9gwiwa1b7"; depends=[survival]; }; muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; - multcomp = derive2 { name="multcomp"; version="1.4-4"; sha256="0mrsnppljxrh5myjh41ba0yvr0yq7dlrcm9xk0b4gk4v7m3b50rx"; depends=[codetools mvtnorm sandwich survival TH_data]; }; + multcomp = derive2 { name="multcomp"; version="1.4-6"; sha256="18pd5v288g4d3kyp1wg0fv6ypyhqq9y17fdxkj0ljsj1f7kgp7py"; depends=[codetools mvtnorm sandwich survival TH_data]; }; multcompView = derive2 { name="multcompView"; version="0.1-7"; sha256="18gfn3dxgfzjs13l039l2xdkkf10fapjjhxzjx76k0iac06i1p7i"; depends=[]; }; multgee = derive2 { name="multgee"; version="1.5.3"; sha256="0m7qgpygsax6f2gakrq19bkxvkl9kn8s4n3wy5lbijx01bay9jg2"; depends=[gnm VGAM]; }; multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-1"; sha256="1kb4qxyl9shvrpqfxq26lhh3sssmyjcnhhcl6gcbb0s86snh9ms9"; depends=[Matrix]; }; + multiCA = derive2 { name="multiCA"; version="1.0"; sha256="1b4m4faaq57k322m7i7y0jqgj7mz4ch39fsn1via7cnd1rrzavq1"; depends=[bitops]; }; + multiDimBio = derive2 { name="multiDimBio"; version="1.1.1"; sha256="0b0lymnli7w91bfd67dsvzbj3flxsrsmbg4a18mzch0j9y6a40x0"; depends=[ggplot2 gridGraphics lme4 MASS misc3d pcaMethods RColorBrewer]; }; multiPIM = derive2 { name="multiPIM"; version="1.4-3"; sha256="0j7d0cgs8zcyiyibzmfhcandad76sf4gm57wkcv98bf96wkls58l"; depends=[lars penalized polspline rpart]; }; multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; }; multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; }; multic = derive2 { name="multic"; version="0.4.3.1"; sha256="16nzvwnh3qjpvzljanzfcz3flvnlir269ss7pic3c6krg6j4m480"; depends=[]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; - multicool = derive2 { name="multicool"; version="0.1-9"; sha256="0afk95ymvz21klxgf51iw6g0k0w65flralqm5nalkdpirrqjbydx"; depends=[Rcpp]; }; + multicool = derive2 { name="multicool"; version="0.1-10"; sha256="1ybg9piya9psqg42w9i3zsnavbxhkfklfwl7cb420i5nkq6wpc2v"; depends=[Rcpp]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; + multigraph = derive2 { name="multigraph"; version="0.50"; sha256="033cxgl1gixrdyyyp7i1hsgf7jjhrn2lnxhp4rq0bnlxg5hgqx8h"; depends=[multiplex]; }; multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; - multilevel = derive2 { name="multilevel"; version="2.5"; sha256="0pzv5xc8p6cpzzv9iq3a3ib1dcan445mm12whf3d6qkz2k4778g6"; depends=[MASS nlme]; }; + multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.4"; sha256="0v4mhdpagmkjsc8x4wlqxa88yl3v0y91a1bbq1lh3rhqfmp9yra5"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; - multimark = derive2 { name="multimark"; version="1.3.2"; sha256="1x2k7nm46mllja8pcf41gws0xfyj27m2fsli5zwk2s2i0c7jwqnj"; depends=[Brobdingnag coda Matrix mvtnorm RMark statmod]; }; + multimark = derive2 { name="multimark"; version="2.0.0"; sha256="0pz0qd1dbblnbazlrkarqbw3y7qhvrrvdi6g3ch8qgkxjkmdxlwj"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; + multinet = derive2 { name="multinet"; version="1.0"; sha256="1ydwb86dylywj76sqsl1yy08mzgj8vqj1gkv9q683i9wc4k74281"; depends=[igraph Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; - multipleNCC = derive2 { name="multipleNCC"; version="1.2"; sha256="12lakxnmcsrrxc52f9p9yrszn7l2iqs6sacf5mz3hpm6h04vlrlp"; depends=[mgcv survival]; }; + multipanelfigure = derive2 { name="multipanelfigure"; version="0.8.3"; sha256="1mjjy1ql8hxb4lfbbh5njly5wswrkf9d63dw24avk9kn7skfmk4h"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; + multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; + multiplex = derive2 { name="multiplex"; version="2.5"; sha256="1yp9n2yzyjrp68fmhv8fgm5qvc4m39qfmw0lnksammmc44hlm12g"; depends=[]; }; + multiplyr = derive2 { name="multiplyr"; version="0.1.1"; sha256="0bsf2zhzqwl3skg26fm27j2wpifky0mph26acrlq8p72njkbcw4d"; depends=[bigmemory bigmemory_sri magrittr]; }; multipol = derive2 { name="multipol"; version="1.0-6"; sha256="1yjz0p4mcgzs98s61i8315wyhh986jxp8b0lq66375ckpr2ddcss"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; - multisensi = derive2 { name="multisensi"; version="1.0-8"; sha256="168g6hym5chz69wa3vfprg1m1c935wh7bi3gfz5calxiqf89mncz"; depends=[]; }; - multisom = derive2 { name="multisom"; version="1.0"; sha256="057gvajkdiiavngg8a140mx97n11czvx7776wbb3ba1bqx3kr887"; depends=[class kohonen]; }; + multisensi = derive2 { name="multisensi"; version="2.0"; sha256="11al13flm3ywgfpj6s6g2jc38bw6pbalf6k5xgix05bgkdd5647s"; depends=[knitr sensitivity]; }; + multisom = derive2 { name="multisom"; version="1.2"; sha256="0j993zxpj7q4am6w0w6i6r1ilk47rb5lv9ywyrz98mzm8rfpm4k0"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; - multitable = derive2 { name="multitable"; version="1.6"; sha256="067bgl793wwvb1rhan70ih0ga3dxja2c6zx7fwzml5rqi6p728pr"; depends=[]; }; - multitaper = derive2 { name="multitaper"; version="1.0-11"; sha256="1s0lmjzpyd7zmc2p1ywv5fm7qkq357p70b76gw9wjlms6d81j1n4"; depends=[]; }; + multitaper = derive2 { name="multitaper"; version="1.0-12"; sha256="011qpkwpjclfc24y2qqigmdnikqwdnanflfhihigh5b5k7qwgm5j"; depends=[]; }; multivator = derive2 { name="multivator"; version="1.1-4"; sha256="125ifkpm1pny4rjpzirnwpmpjfg0y8w0rygj0way0p1qwm0l207n"; depends=[emulator mvtnorm]; }; - multiwave = derive2 { name="multiwave"; version="1.0"; sha256="1gag8pw12ksinymxig8sa8wvsd4amaqmzm4ngxmfvci0y4kckx0h"; depends=[]; }; + multiwave = derive2 { name="multiwave"; version="1.2"; sha256="1bw071izjxrsk5gx8s49nrlryabpgpg7k2z1ghmk8p6i9m5apnl8"; depends=[]; }; multiway = derive2 { name="multiway"; version="1.0-2"; sha256="03cj4767xd1918vb4jkp7xk2l4gq340c0kc24h40zq4c3gsxwmbw"; depends=[]; }; - multiwayvcov = derive2 { name="multiwayvcov"; version="1.2.2"; sha256="13a8w87wq7jv9y654qvlik01q4v0j0mrina2xmvrzqlm25f2rj3w"; depends=[boot sandwich]; }; + multiwayvcov = derive2 { name="multiwayvcov"; version="1.2.3"; sha256="1znsmca16jac8s5z0j64cck27pvf88anm1mfblabqchqqcz1ykfc"; depends=[boot sandwich]; }; multxpert = derive2 { name="multxpert"; version="0.1"; sha256="03mvf4m0kabm22vy4zkj1cfh884larpj8cbgg3p9l3pag20snf1l"; depends=[mvtnorm]; }; muma = derive2 { name="muma"; version="1.4"; sha256="0midx3wzyvcz8rk9kvsfll3xg41pkz40si4jw2ps54ykkf9rkm99"; depends=[bitops car caTools gplots gtools mvtnorm pcaPP pdist pls robustbase rrcov]; }; munfold = derive2 { name="munfold"; version="0.3.5"; sha256="17zizx9r0f8dxb7dkgn1nn0fp7ydy6r155p1zfz0v93jc26lc1hb"; depends=[MASS memisc]; }; @@ -5685,112 +7090,136 @@ in with self; { munsellinterpol = derive2 { name="munsellinterpol"; version="1.0.2"; sha256="1c4m9fhggczy3wk51m8qxiahkic1f1lq3r8b0x0mk34pd5wap48a"; depends=[geometry]; }; murphydiagram = derive2 { name="murphydiagram"; version="0.11"; sha256="0wax9gjhzz8nphzwijqzllz4y25jksf1vqfcbnfb7zafsfv40rib"; depends=[]; }; musicNMR = derive2 { name="musicNMR"; version="0.0.2"; sha256="09xxc78ajk428yc3617jfxqp5fy89nfc24f1rig6cw28fflwqj0k"; depends=[seewave]; }; + musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; }; + mutSignatures = derive2 { name="mutSignatures"; version="1.2"; sha256="1kbp221lm43a5wiw754yjkd3qidmca20m0i8jlxsqk8ijbp40ky2"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; }; mutoss = derive2 { name="mutoss"; version="0.1-10"; sha256="1pijr3admnciiwdgxbdac4352m7h08jyvpj7vdd27yx07wp2rri3"; depends=[multcomp multtest mvtnorm plotrix]; }; mutossGUI = derive2 { name="mutossGUI"; version="0.1-10"; sha256="16fgmpnym9nhiywqimjgv10swrvs3whp0nlzsw573vv0k6qjmwd2"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; - mvMORPH = derive2 { name="mvMORPH"; version="1.0.6"; sha256="15cy480x3xrwsm3wpcsam24034vd1ga119k4800ga8l70k8gw8cw"; depends=[ape corpcor phytools spam subplex]; }; + mvLSW = derive2 { name="mvLSW"; version="1.0"; sha256="0sbiq7ynilbnwggfl4n9s43cvzgavxq9vi4q09cz3v8wf8xjj3kf"; depends=[fields wavethresh]; }; + mvMORPH = derive2 { name="mvMORPH"; version="1.0.8"; sha256="1psjlqx7xb5zlrwcd2q2by8y8ykffxdcskbzb12f643iimlp1l4m"; depends=[ape corpcor phytools spam subplex]; }; + mvPot = derive2 { name="mvPot"; version="0.1.2"; sha256="0ni953ncm8h4ap0gjimlxjypgjaj2crlx4vscqi7a158hphahj2g"; depends=[evd gmp MASS numbers]; }; mvProbit = derive2 { name="mvProbit"; version="0.1-8"; sha256="07dizclqjlwj29yb3xwjihjh8kmn6jiq5cpf8rcirylzykfdv3wk"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; - mvQuad = derive2 { name="mvQuad"; version="1.0-5"; sha256="0byxp30s5pc7mqwza6x8czqgvqbk2xhb9mq0lmkwhk78y80954jv"; depends=[data_table rgl statmod]; }; - mvSLOUCH = derive2 { name="mvSLOUCH"; version="1.3"; sha256="079iqb4rgh0r0q7hg7fw9wqv8jhfd7789izy8wa9hjilmgq8rbba"; depends=[ape corpcor mvtnorm numDeriv ouch]; }; + mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; + mvSLOUCH = derive2 { name="mvSLOUCH"; version="1.3.2"; sha256="142ldrd3y335z9dsgk9g8fd9ikg0wqfgmr45by39f44gnxsmbvzi"; depends=[ape corpcor mvtnorm numDeriv ouch]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; - mvabund = derive2 { name="mvabund"; version="3.11.5"; sha256="1l7icsivywjqmwndqhq0d28wbim68y4y8dkb17pw308n9kn5p7d4"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; + mvabund = derive2 { name="mvabund"; version="3.12"; sha256="1njszq4fh7ffbr18yd1r23gya33klk5kpzaj414ijp3hwj24wppm"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.7.4.1"; sha256="1vs97yia78xh35sdfv5pj3ddqmy83qgamvyyh9gjg0vdznqhffzg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; + mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; mvctm = derive2 { name="mvctm"; version="1.0"; sha256="1naxjh2k3vv4wlpzzx0y2zwvbn4kdqyls8a8qx6bz609ynzay5r9"; depends=[Formula MNM nlme quantreg Rfit]; }; mvcwt = derive2 { name="mvcwt"; version="1.3"; sha256="0fqdyypmszm00rpl04z8kiiw6jd416a0b2rap3dqq3kchnz8h4s2"; depends=[foreach RColorBrewer]; }; + mvdalab = derive2 { name="mvdalab"; version="1.1"; sha256="18lwhplwp87dcvxzvyah3g98b5jrs91ifwk2hwn5a1gs733va989"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; mvglmmRank = derive2 { name="mvglmmRank"; version="1.1-2"; sha256="1051l10fbr7m9rmrlvj98660f0pn992n3vxiwnhml07wvvdknw3d"; depends=[Matrix numDeriv]; }; - mvinfluence = derive2 { name="mvinfluence"; version="0.6"; sha256="1cd5p6cl2zln8madjf3vsbmqlg4nsklzzy6ngdd5glj1a9qapd6c"; depends=[car heplots]; }; - mvmesh = derive2 { name="mvmesh"; version="1.2"; sha256="0461yd21fpgc8ibzg6x7b2lv2zy42wx8w4w6r4h8hgsav68vilzm"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; + mvinfluence = derive2 { name="mvinfluence"; version="0.8"; sha256="08p5hxqa8qp8g52w2d3jqbjzrv607fdm80k6vwaz63fxhk8h82wq"; depends=[car heplots]; }; + mvmesh = derive2 { name="mvmesh"; version="1.4"; sha256="14yk09s1ym4p9nijxqasd3060hncmr1br7lv9rk9vm96bgi6l1rc"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; mvmeta = derive2 { name="mvmeta"; version="0.4.7"; sha256="1yadaviq66wdfs0dipn6gxk7jqvzwzjdr8lkfggdsl4vyyi9pwip"; depends=[]; }; mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; }; - mvna = derive2 { name="mvna"; version="1.2-3"; sha256="1gwv17j6w9c38bqvnasv9kfigbdxiqkzwj89gqmkxgw715f9nnpp"; depends=[lattice]; }; - mvnfast = derive2 { name="mvnfast"; version="0.1.4"; sha256="0bhm1g8wnq389ca75lc6hs2g1xin83smwhc8qwik8gria7r2zymf"; depends=[BH Rcpp RcppArmadillo]; }; + mvna = derive2 { name="mvna"; version="2.0"; sha256="0qy4s8v20ccjdgqj3lgnl903b7m1rgc5lq8w66d5dl41s0jlnmx6"; depends=[lattice]; }; + mvnfast = derive2 { name="mvnfast"; version="0.2.0"; sha256="0r33jigwbj01isrc40rgisjy3nqn7yynmlwdxn7k8z06pg7mbxrm"; depends=[BH Rcpp RcppArmadillo]; }; mvngGrAd = derive2 { name="mvngGrAd"; version="0.1.5"; sha256="0ir4pakfb2jq84rbfqix6rph8q6cgadjdn49rrdl4439b8hlsg8k"; depends=[]; }; mvnmle = derive2 { name="mvnmle"; version="0.1-11"; sha256="02mpmrr22cqb3v8x7kydgg715yl3lrdgzgdqpchmp0xrl2db8gq4"; depends=[]; }; mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; }; mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; }; - mvoutlier = derive2 { name="mvoutlier"; version="2.0.6"; sha256="00kim5i8xdbaqc0l16w1pif5yfqf741x686lq6drb243jl89rfjv"; depends=[robCompositions robustbase sgeostat]; }; + mvoutlier = derive2 { name="mvoutlier"; version="2.0.8"; sha256="07a2pv8bw5k0faiy0skdchg7c0n236saq5d8plqq7234n3rjl8pg"; depends=[robCompositions robustbase sgeostat]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; }; - mvtboost = derive2 { name="mvtboost"; version="0.4.1"; sha256="1sxbldbcy3md4bni5lgs8v9sl67hjphlhglzbq4nx48iclvixcq6"; depends=[gbm RColorBrewer]; }; + mvst = derive2 { name="mvst"; version="1.0.1"; sha256="0sv8pd1524pr3xpxplq468dxfd0wipdr41awqwvcljpw5wgl34qa"; depends=[MCMCpack mnormt mvtnorm]; }; + mvtboost = derive2 { name="mvtboost"; version="0.5.0"; sha256="06zgx1c2470bh3x6s2awzkxbyij6bvzv23xbvamg77v5pz5bjj6h"; depends=[gbm RColorBrewer]; }; mvtmeta = derive2 { name="mvtmeta"; version="1.0"; sha256="0g0d4lrz854wkd0dz5aiad54i46aqkfhsq6cpbsfv0w5l2kwiqqz"; depends=[gtools]; }; mvtnorm = derive2 { name="mvtnorm"; version="1.0-5"; sha256="1pc1mi2h063gh4a40009xk5j6pf5bm4274i5kycln38dixsry3yh"; depends=[]; }; mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; }; mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; }; - mwaved = derive2 { name="mwaved"; version="1.1.2"; sha256="0z9p4756azl506lg3583a5zrjz0dl55lhmjml1xifnk868gld6xs"; depends=[Rcpp shiny]; }; + mwaved = derive2 { name="mwaved"; version="1.1.4"; sha256="09v3cx2scp8fjcjzsdf7k2xl5y2491hbp25mnbjvm6v16hi2g180"; depends=[Rcpp shiny]; }; mxkssd = derive2 { name="mxkssd"; version="1.1"; sha256="0m9763dqrk8qkrvp18bsv96jv0xhc2m8sbxdk6x3w6kdjcl663p2"; depends=[]; }; - myTAI = derive2 { name="myTAI"; version="0.3.0"; sha256="0j0wdc7p98h14l51f0mgl6k7ns8fb93y12z7mjik4dpakzsanl68"; depends=[doParallel dplyr edgeR fitdistrplus foreach ggplot2 nortest RColorBrewer Rcpp reshape2 taxize]; }; + myTAI = derive2 { name="myTAI"; version="0.4.0"; sha256="15ax5hwgqqyf5qmpmnjqvszwxyvvasmmxc03m53f7gdnpmv2wpg8"; depends=[doParallel dplyr edgeR fitdistrplus foreach ggplot2 nortest RColorBrewer Rcpp readr reshape2 taxize]; }; mycobacrvR = derive2 { name="mycobacrvR"; version="1.0"; sha256="1xd9ackzdd8db6bayza0bg4n256mi9rdqih0cdc0nl212c3iz75g"; depends=[]; }; mycor = derive2 { name="mycor"; version="0.1"; sha256="1ibcxl9v2d2mxpwad0rv5dw1j645rrg05f4aqvyhyd40hz9823mr"; depends=[lattice]; }; myepisodes = derive2 { name="myepisodes"; version="1.1.1"; sha256="0xk9bwgpl630nhc8qa2pc0rwqbqk3haxnp78gfxq6sn6z7i44k1p"; depends=[XML]; }; mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; - nCal = derive2 { name="nCal"; version="2015.3-3"; sha256="0vj6l8w29ymj1v18mb4qyw6w1xpmwx5bvil4kjb82gccsb95ir10"; depends=[drc gdata gWidgets kyotil]; }; + nCal = derive2 { name="nCal"; version="2016.7-31"; sha256="12zj22myfxqxyq7bl669ngyk6yb3i9gsg00qqw5a5x2w95imwv20"; depends=[drc gdata gWidgets kyotil]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.3.3"; sha256="016d76yfxz7gx7zz5dgwjmj2c5m6kxdmqj0lln5w6d70r9g1kxg7"; depends=[boot lattice MASS psych]; }; - nLTT = derive2 { name="nLTT"; version="1.1.1"; sha256="0z3d61s6dfkvjv60qyx2mv5f0w1jg0qh5kb3vch3m2am5rbg9fq3"; depends=[ape coda deSolve]; }; + nLTT = derive2 { name="nLTT"; version="1.3.1"; sha256="1wha26lcgk2kw48vyiws1ciyp8x6d7nmkrahh5b8w23ns6bqpngf"; depends=[ape coda deSolve]; }; nabor = derive2 { name="nabor"; version="0.4.6"; sha256="0kd0h8n5yrn16vrfdchdiqzws05q0fm8z577p20dm18gdcs2vbxv"; depends=[BH Rcpp RcppEigen]; }; - nadiv = derive2 { name="nadiv"; version="2.14.2"; sha256="1w3mvid500jcxj79q3104cb40akchpgdfchwljvabv3q4wlj1kzj"; depends=[Matrix]; }; + nadiv = derive2 { name="nadiv"; version="2.14.3.1"; sha256="08276bakyrn9d9vh08yzan60kigsihwfhgx788gwp6pk8v6m25wa"; depends=[Matrix]; }; + naivebayes = derive2 { name="naivebayes"; version="0.9.1"; sha256="051mg1idim75k181v4n8s5rji94rwy9c75yjkavjhr4brhizqy8f"; depends=[]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; + nanotime = derive2 { name="nanotime"; version="0.1.1"; sha256="1jir0hhksa4shfn7paln9s3ccsmmyl70hlsk9q5glwi87j6mhlnn"; depends=[bit64 RcppCCTZ zoo]; }; + naptime = derive2 { name="naptime"; version="1.2.2"; sha256="0jzzs7iphcan6vf1bc3h82gpplnlkw9vhg6366izr2b7vycxafi5"; depends=[anytime lubridate]; }; + narray = derive2 { name="narray"; version="0.1.1"; sha256="0n620wzhmlyjkbbwr0py2xfk0vj59a5zyr4d93iyplcrjg91n6zg"; depends=[abind pryr reshape2 stringr]; }; + nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; - nat = derive2 { name="nat"; version="1.8.1"; sha256="0w6gsq4vcn8xh05yxb4ipgn69n8lba9ia56ahx2q7dw8mj9mpk9v"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; - nat_nblast = derive2 { name="nat.nblast"; version="1.5"; sha256="1slpk126fwgn90j3aazlf3pw2ij050dghc1yqadv6mjcj82qpm5i"; depends=[dendroextras nabor nat plyr rgl spam]; }; + nat = derive2 { name="nat"; version="1.8.7"; sha256="14mfjlhf08ypbml8zqz90z80dljqk9ns7mk1h0s0fma308xwab7m"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; + nat_nblast = derive2 { name="nat.nblast"; version="1.6.2"; sha256="0b2gzyzszj2v5girxyv31nvds0837lzvim7x7bs9h897yrxs57k8"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.6.2"; sha256="1yc0k5nsg6nmxf3wmhr5prbz2l820z62xjayi83mz3jpzwilz4by"; depends=[digest igraph nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; - naturalsort = derive2 { name="naturalsort"; version="0.1.2"; sha256="0m8a8z0n5zmmgpmpn5w87j2jfsz1igz3x133z3q25h8jlyaxy750"; depends=[]; }; + natserv = derive2 { name="natserv"; version="0.1.4"; sha256="0qwf7lapx5gchk8xmdnmxr10j5dnkp52mqnh1ja216z7l841cl07"; depends=[crul data_table tibble xml2]; }; + naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; + nbc4va = derive2 { name="nbc4va"; version="1.0"; sha256="0y1qpkzjr327qyvmqf129m400rvn6gwk72ccnly6cqq53icrarn4"; depends=[]; }; nbconvertR = derive2 { name="nbconvertR"; version="1.0.2"; sha256="1dc9jxfibvb27qwiykj93322nb1ahwrg69zqcc0p9xp0rpsim02w"; depends=[]; }; - nbpMatching = derive2 { name="nbpMatching"; version="1.5.0"; sha256="16g45yzia748qhmd4imib33qs8i1b1qy5h6gmlr9rr6dwbnv2fig"; depends=[Hmisc MASS]; }; + nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; ncappc = derive2 { name="ncappc"; version="0.2.1.1"; sha256="19wq7ihcr8989xpzf1dsxz1kwwzqvsx2mwcciqv9204k4fc94zjc"; depends=[dplyr ggplot2 gridExtra gtable knitr lazyeval readr reshape2 scales testthat xtable]; }; + ncar = derive2 { name="ncar"; version="0.3.1"; sha256="1mlqmz4737827dl131lqg5mbn8sk4ghiazlicdp99cjq5vr8fk7h"; depends=[dplyr Hmisc lubridate measurements tidyr]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf_tools = derive2 { name="ncdf.tools"; version="0.7.1.295"; sha256="1jgxivmg2gzvkn09n13i5xr1v0xcyp5ckhwxz6g5kdh9z2dkjhc2"; depends=[abind chron JBTools plotrix raster RColorBrewer RNetCDF]; }; ncdf4 = derive2 { name="ncdf4"; version="1.15"; sha256="0kad69py4nhlsl4xmsfdisx0kzcjch91c0m786h80v3w67s9i0nm"; depends=[]; }; ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-3"; sha256="051akd7r6zx805a0xwcs95q5sd8alag0f1gzqjk3n188q8r3ji5j"; depends=[abind ncdf4 PCICt]; }; - ncf = derive2 { name="ncf"; version="1.1-6"; sha256="1c0ia6lv36lvqsl16s0a450adkab366k28bcdhff3g31i04xh8mk"; depends=[]; }; + ncf = derive2 { name="ncf"; version="1.1-7"; sha256="0r3xhpinkcnkzc855q8ddd889v12snx4n1g8jyw9cnmrki8n2hxh"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; - ncvreg = derive2 { name="ncvreg"; version="3.5-1"; sha256="0dmg8kskihy71j0di4xy2q17bxhyl5803fm6lmsnayziz6fpis6d"; depends=[]; }; + ncvreg = derive2 { name="ncvreg"; version="3.8-0"; sha256="19yir4bwinpd6rgk6ncg3x42qpx3d884f91qq9gl16y9kc4blp87"; depends=[]; }; + ndjson = derive2 { name="ndjson"; version="0.2.0"; sha256="1y6hjcip18mazss7g888pydywb07hkfrk6ams0sm71yckyc865lb"; depends=[data_table dtplyr Rcpp Rcpp11]; }; ndl = derive2 { name="ndl"; version="0.2.17"; sha256="08h01rw7gsa31zp91q2rsw1ba9yf0fyhz3w8s9xq5788qwc80280"; depends=[Hmisc MASS Rcpp]; }; - ndtv = derive2 { name="ndtv"; version="0.9.0"; sha256="1b35xladdldy801w05d9n40k8vnrzai4a3jywhkbmg448n2q8xy8"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; + ndtv = derive2 { name="ndtv"; version="0.10.0"; sha256="1j4g5qclfbw7fkykaclrsb2d70vy40fd1rgr1n73qyrkx0fyym44"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; + nearfar = derive2 { name="nearfar"; version="1.0"; sha256="1fafsb392dm16388a17sfwfgnxwbr8y8v7sdvbfv46sdndwaif1z"; depends=[AER GenSA MASS nbpMatching sem]; }; neariso = derive2 { name="neariso"; version="1.0"; sha256="1npfd5g5xqjpsm5hvhwy7y84sj5lqw9yzbnxk6aqi80gfxhfml4c"; depends=[]; }; - needs = derive2 { name="needs"; version="0.0.2"; sha256="1w24jxkm456by9fm5wmdxv8gspd78p95jar9b22x1r9jry4nfmhk"; depends=[]; }; + neat = derive2 { name="neat"; version="1.0"; sha256="191bx96cmrzy4jd5x96h1vw01ii60jy7mlmcl5lzwkxrbv4zr6k7"; depends=[]; }; + needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; }; needy = derive2 { name="needy"; version="0.2"; sha256="1ixgpnwrg6ph1n5vy91qhl1mqirli9586nzkmfvzjrhdvrm0j5l0"; depends=[]; }; - negenes = derive2 { name="negenes"; version="1.0-3"; sha256="19xlw3l90gwan0p40r0s2xy0yv8id32h1i56496spgi02vh3pnsl"; depends=[]; }; + negenes = derive2 { name="negenes"; version="1.0-5"; sha256="0fdhc0v0b820wfg3sypvya7zhg7mhfmdbfiwn1lj3a2xg01zvc2n"; depends=[]; }; neldermead = derive2 { name="neldermead"; version="1.0-10"; sha256="1snavf90yb12sydic7br749njbnfr0k7kk20fy677mg648sf73di"; depends=[optimbase optimsimplex]; }; - neotoma = derive2 { name="neotoma"; version="1.5.0"; sha256="13xc9sp25diw8y0fsasgl6aq34fzv4xlnrdfg4dch9zr3dnwc92h"; depends=[httr jsonlite plyr reshape2 xml2]; }; + neotoma = derive2 { name="neotoma"; version="1.6.2"; sha256="023dpcrhhq8daa0c4viccqs9y19gi05srz4d985diaq7yxjs9vhz"; depends=[analogue httr jsonlite plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.1"; sha256="06lxkk67n5whgc78vrr7gxvnrz38pxlsj4plj02zv9fwlzbb9h6p"; depends=[]; }; nestedRanksTest = derive2 { name="nestedRanksTest"; version="0.2"; sha256="0r08jp8036cz2dl1mjf4qvv5qdcvsrad3cwj88x31xx35c4dnjgj"; depends=[]; }; netClass = derive2 { name="netClass"; version="1.2.1"; sha256="04yrj71l5p83rpwd0iaxdkhm49z9qp3h6b7rp9cgav244q060m9y"; depends=[AnnotationDbi graph igraph kernlab Matrix ROCR samr]; }; + netCoin = derive2 { name="netCoin"; version="0.2.2"; sha256="18ffpkcqhpw3b5jrlv63av8v2hhpgz8pqvg5mwc5mmqgar0cffb0"; depends=[igraph Matrix]; }; netassoc = derive2 { name="netassoc"; version="0.6.2"; sha256="01h0nnyrgv08bxyl01lqsqnj69bhkwci692h77vfa7cf8rsm67kg"; depends=[corpcor huge igraph infotheo rags2ridges vegan]; }; - netcoh = derive2 { name="netcoh"; version="0.1"; sha256="0id86wvws213695sv81mrmf4chz9xfyhaf58q1vfhq8yxfhw1fnd"; depends=[Matrix Rcpp RcppArmadillo]; }; - netdiffuseR = derive2 { name="netdiffuseR"; version="1.16.2"; sha256="1ck5sxmwsraggznf1i2z8q2kmjs75nf63y6s2zik14ini5dd5qyw"; depends=[boot Matrix Rcpp RcppArmadillo sna SparseM]; }; + netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; }; + netdiffuseR = derive2 { name="netdiffuseR"; version="1.17.0"; sha256="15yq903li51s2mbjp7bqrvk2zcf2yjmvvma2ynp325aqhwgvisf7"; depends=[boot igraph MASS Matrix network Rcpp RcppArmadillo sna SparseM]; }; netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; }; - netgsa = derive2 { name="netgsa"; version="2.0"; sha256="04id2wcrmi0lqvn4a8qhqkc3z076b8xd7jhw9hsmaz21g9cxdfx8"; depends=[corpcor cvTools glasso glmnet igraph]; }; - netmeta = derive2 { name="netmeta"; version="0.8-0"; sha256="0qadg3h9aa3qx51hvqikzb5s087r5ihmp6ffxg5x1bmw86yfi2bq"; depends=[magic meta]; }; + netgsa = derive2 { name="netgsa"; version="3.0"; sha256="0cqyiilpxhdi6zmibn85y1aqwpcs1aialz34klakmllzn6kvdsng"; depends=[corpcor glasso glmnet igraph Matrix]; }; + netmeta = derive2 { name="netmeta"; version="0.9-2"; sha256="1hzmlac8kpgh27783fir27dwvzga1v00098qy8z955iy4nkpm1pq"; depends=[magic meta]; }; nets = derive2 { name="nets"; version="0.8"; sha256="10h6sqy9jw2a909nzmzd5x9cjg3w4wpqwikp23k4q9fj71aswd5v"; depends=[igraph]; }; nettools = derive2 { name="nettools"; version="1.0.1"; sha256="13fw316r31g9cjlbyy9qfccsyagxb6pyvn5k32f166b7vj92mk1q"; depends=[combinat dtw igraph Matrix minerva minet rootSolve WGCNA]; }; network = derive2 { name="network"; version="1.13.0"; sha256="11sg330xb7gcnl3f6lwhhjdabz6mk43828i2np635pqw4s4yl13s"; depends=[]; }; - networkD3 = derive2 { name="networkD3"; version="0.2.8"; sha256="0w3wax4sfi67k9qjfkz5xfkqzr7ssmkm912snvfbxyynclkzbdrj"; depends=[htmlwidgets]; }; + networkD3 = derive2 { name="networkD3"; version="0.3"; sha256="0g1l8a6qlpxylxnnavjcwdjx6v8nxkxzigilywyqhqhmpcsnp7bg"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.9.0"; sha256="1949fbcw0gq8lsm6rx5d5mpj1y9k4rk2v0pmm1kxi5igi6yd8lg9"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; networkTomography = derive2 { name="networkTomography"; version="0.3"; sha256="1hd7av231zz0d2f9ql5p6c95k7dj62hp0shdfshmyfjh8900amw7"; depends=[coda igraph KFAS limSolve plyr Rglpk]; }; - networkreporting = derive2 { name="networkreporting"; version="0.0.1"; sha256="1vfvx5gf90p31gy6kcv7l2ibzbfl382gffa79dl8gascbsg6s8z8"; depends=[functional ggplot2 plyr reshape2 stringr]; }; + networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; }; networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; }; neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; }; neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; }; - neuralnet = derive2 { name="neuralnet"; version="1.32"; sha256="0p9r5j8q0flv15wn5s6qi9if7npna107l1ffv37nzx1b4vgswnl9"; depends=[MASS]; }; + neuralnet = derive2 { name="neuralnet"; version="1.33"; sha256="14ga04mcd793v9a2584jb9l7n20kw00fgy3gayfwrkr1j39szdls"; depends=[MASS]; }; + neurobase = derive2 { name="neurobase"; version="1.9.2"; sha256="048z1m8kx5g91v6hram4xchyfa28kkp8cjc8rkdvs6r1wrflp0a3"; depends=[matrixStats oro_nifti R_utils RNifti]; }; neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; - ngram = derive2 { name="ngram"; version="1.1"; sha256="0p5wm55anch1i0y3478f5d4sivs7q8j3kwlg89nk3337win06499"; depends=[]; }; + neuropsychology = derive2 { name="neuropsychology"; version="0.3.0"; sha256="17jil4xsys676n73icpx5b9d1jilqq190xcdqjq7da11pvig76i9"; depends=[BayesFactor dplyr ggcorrplot ggplot2 Hmisc htmlTable lme4 MuMIn png prettyR tm wordcloud2]; }; + ngram = derive2 { name="ngram"; version="3.0.2"; sha256="01ji3whn10m6z29vhi01vpjl09ci1r52arrjp73s7z3y0l6pj9r7"; depends=[]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; - ngspatial = derive2 { name="ngspatial"; version="1.0-5"; sha256="0dd7gm6irq08054ndj2gykz4nnfqfq3wbivg6fmlkdnn18kbckkk"; depends=[batchmeans Rcpp RcppArmadillo]; }; - nhanesA = derive2 { name="nhanesA"; version="0.6.3"; sha256="0g4nhm1y6wqdvc1vf8r7m0yhvfmzj3hl4xil6m9vi2h8yp2sblv0"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; + ngspatial = derive2 { name="ngspatial"; version="1.1-3"; sha256="08g1786vxb544r6i6mccd4gzzgcq35m0af65326m82xxyffiv6gw"; depends=[batchmeans lattice Rcpp RcppArmadillo]; }; + nhanesA = derive2 { name="nhanesA"; version="0.6.4.3.3"; sha256="09mpxmk8w48hc14167jd2xifnj0kjz9h3h76bdnbb33wvhkn4jld"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhlscrapr = derive2 { name="nhlscrapr"; version="1.8"; sha256="0y2shw3g84flh88a15czdsb62xwdqxhvzkn4kpbn0k9ddyfzxc48"; depends=[biglm bitops RCurl rjson]; }; - nice = derive2 { name="nice"; version="0.4"; sha256="1alq8n8pchn9v0fvwrifdisazkh519x109bqgnpgnwf79wblmnhy"; depends=[]; }; + nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; + nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; + nima = derive2 { name="nima"; version="0.3.0"; sha256="10g0a8qa64sk16xrya3qhrlrjbjyq7ndv208xz36knp5az2n27ak"; depends=[assertthat ggplot2 gridExtra plyr survival]; }; + nimble = derive2 { name="nimble"; version="0.6-3"; sha256="0j52kqr53lxmsc7dsv67mbqr5lg51vc2l7fqnv6qmrnzl4mn5ds0"; depends=[coda igraph]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; - nlWaldTest = derive2 { name="nlWaldTest"; version="1.0.1"; sha256="1rwpkkddivpcamhsp22nmy5gz2006y9kbdzj8lhh20s1vsyhn2b3"; depends=[numDeriv stringr]; }; - nleqslv = derive2 { name="nleqslv"; version="3.0"; sha256="0f5cnpz4kmpli7haczhv1qkp2f386n1yq7bdwgaxy0xa96cyyzmc"; depends=[]; }; - nlme = derive2 { name="nlme"; version="3.1-126"; sha256="1vvyzypr88sp2c12nngfzsc1m8w5a416ph28cawzji25m0b1py6i"; depends=[lattice]; }; + nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; + nleqslv = derive2 { name="nleqslv"; version="3.1"; sha256="0vvyyafighfck8f9imcpqlr1b5v3znsr5czgl5k4b02jymdwrhvs"; depends=[]; }; + nlme = derive2 { name="nlme"; version="3.1-131"; sha256="0k2nvdzhic6bzhfsbq6la6q6a1i5nlj4pnh6lpdxiiwvxdks3nkr"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; @@ -5800,12 +7229,16 @@ in with self; { nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; nls2 = derive2 { name="nls2"; version="0.2"; sha256="0k46i865p6jk0jchy03jiq131pc20h9crn3hygzy305rdnqvaccq"; depends=[proto]; }; nlsMicrobio = derive2 { name="nlsMicrobio"; version="0.0-1"; sha256="0676n78265z00dacmq593c9l2239ii574djm9s7i7w8jk1kdhzx2"; depends=[nlstools]; }; - nlsem = derive2 { name="nlsem"; version="0.6"; sha256="18x3mw8p297b2yq2m3m8fjxs50v9drllkrj4vqni9w4c6v70gz63"; depends=[gaussquad mvtnorm nlme]; }; + nlsem = derive2 { name="nlsem"; version="0.7"; sha256="1g5vnqmqq4swnid3601f1cm0q9w9k802394jd3yac95n8sm05i5g"; depends=[gaussquad lavaan mvtnorm nlme orthopolynom]; }; + nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; }; nlsmsn = derive2 { name="nlsmsn"; version="0.0-4"; sha256="1gvpy8rq020l64bdw6n7kv354l7gwa2rgxarm6k0mqq7z21fxf58"; depends=[]; }; + nlsr = derive2 { name="nlsr"; version="2017.2.12"; sha256="1fzyfqi6nfzxg0vjlqcvrf6p7qjgvg9qvf4icy13vqs1k70y5v4x"; depends=[digest]; }; + nlstimedist = derive2 { name="nlstimedist"; version="1.0.4"; sha256="10wbkngcx02cjyv188ascrw7aaqg8vvwbr7rgy6q87ch5g7ih35g"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; }; nlstools = derive2 { name="nlstools"; version="1.0-2"; sha256="0mjn1j9fqqgr3qgdr0ki4lfbd0yrkanvya4y2483q3wklqa6qvjc"; depends=[]; }; nlt = derive2 { name="nlt"; version="2.1-3"; sha256="1j0xrrbr1hvfda8rvnc17lj96m6cz24faxvwn68ilf7j1ab2lkgn"; depends=[adlift EbayesThresh]; }; nlts = derive2 { name="nlts"; version="0.2-0"; sha256="14kvzc1p4anj9f7pg005pcbmc4k0917r49pvqys9a0a51ira67vb"; depends=[acepack locfit]; }; nmcdr = derive2 { name="nmcdr"; version="0.3.0"; sha256="1557pdv7mqdjwpm6d9zw3zfbm1s8ai3rasd66nigscmlq102w745"; depends=[CDFt]; }; + nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; @@ -5813,69 +7246,90 @@ in with self; { nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.1.4"; sha256="0m12pw4l7lmqn796ac6yn3f9h5h59cv84swb8fk559aw258kpr4s"; depends=[ape picante raster sp vegan]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; - nomclust = derive2 { name="nomclust"; version="0.91.1010"; sha256="02jpzcjclm22bjg59wj4490vh2rp9ma1vqxdnwmppyb478558fz1"; depends=[cluster dummies]; }; + noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; + nomclust = derive2 { name="nomclust"; version="1.00.1011"; sha256="1mzz1bc8gg9lw5aacmicfzjak212hrbq2wchblljcxxjvkkn87w5"; depends=[cluster dummies]; }; + nomogramEx = derive2 { name="nomogramEx"; version="2.0"; sha256="1as0hbmb37z9izz95x9rd98a0fs4b6zbhzjpgnyq5c1j4219vzs3"; depends=[pracma rms]; }; noncensus = derive2 { name="noncensus"; version="0.1"; sha256="0cfj17bfzddfshhhzv2ijhrp9ylcscmsysswjcsjfxmy3gbkd00q"; depends=[]; }; noncompliance = derive2 { name="noncompliance"; version="0.2.2"; sha256="1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6"; depends=[data_table Rcpp]; }; nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.3"; sha256="1pcah255hh3lqabxgjb5fsaap4s2d92lvxw9a48l1p4dkmm1lbsx"; depends=[Matrix Rcpp rgl TSA tseries]; }; - nonnest2 = derive2 { name="nonnest2"; version="0.3"; sha256="01j336lms0cinyzjhdgzqlh9hhvxx3lpri195cj2h0ssfzvy4z0z"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; + nonmem2R = derive2 { name="nonmem2R"; version="0.1.5"; sha256="07ky2s8bfk6qiayj9vv9plwkd4615nkk9vb0aa4bq54m0191zd18"; depends=[lattice latticeExtra MASS mvtnorm xpose4]; }; + nonnest2 = derive2 { name="nonnest2"; version="0.4-1"; sha256="0lgcrxvyyw789hw80lqbxvvxl6z95qxzq9k5lphl5435xqzpfj6f"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; + nonpar = derive2 { name="nonpar"; version="1.0.0"; sha256="0baavlsnh5hjgmhx42v0vn4c11bcrbssxxc7971g0rk93cgnk5nj"; depends=[]; }; nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; }; nonrandom = derive2 { name="nonrandom"; version="1.42"; sha256="0icm23hw593322z41wmjkwxqknh2pa9kpzbrch7xw1mhp93sd5ll"; depends=[lme4]; }; - nontarget = derive2 { name="nontarget"; version="1.8"; sha256="01prm3lixr3qai3m8d83nmgx501mmrj45kx1k2xg1cy1n2c2ik17"; depends=[enviPat mgcv nontargetData]; }; + nontarget = derive2 { name="nontarget"; version="1.9"; sha256="0ndqcr73sja5ks5kdahhakpz9lw3rp26imklagdv4f5agqnb608s"; depends=[enviPat mgcv nontargetData]; }; nontargetData = derive2 { name="nontargetData"; version="1.1"; sha256="07cdbpmn64sg4jfhljdcx503d55azyz58x7nkji044z3jmdryzqw"; depends=[]; }; - nopp = derive2 { name="nopp"; version="1.0.6"; sha256="0qcj3bci3iwq88vgbhxavvrkz8n276rx4q16f2vcqszzf6zajfr5"; depends=[mlogit]; }; - nor1mix = derive2 { name="nor1mix"; version="1.2-1"; sha256="1sh7373w8z1mqkk8wvwzxab57pg1s3wcs6y6sx0sng7pf429x2m3"; depends=[]; }; + nopaco = derive2 { name="nopaco"; version="0.99.8"; sha256="07pff53nzilbl0ww6jzxw0m8z6x4ssb1xajzgi8bck2bsdd8bhid"; depends=[Matrix]; }; + nopp = derive2 { name="nopp"; version="1.0.8"; sha256="0yjnzxlmadh2g0frfwm7rrr0kqb5pjvrnjmzl6pikzr99yh8aags"; depends=[MASS mlogit]; }; + nor1mix = derive2 { name="nor1mix"; version="1.2-2"; sha256="14djjhhivl49jnsmnydcswmc6bzfvgjjg7pibg32a9p3y2f0lmnq"; depends=[]; }; nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; + norm2 = derive2 { name="norm2"; version="2.0.1"; sha256="09447dng9px1ynfp382vjmh5iqdnhc7kxg28cbmqx7ncj1z5a2bm"; depends=[]; }; normalp = derive2 { name="normalp"; version="0.7.0"; sha256="1s12x2qln3s4bbqsm4p3cq4g6461z73r858g6ym1awamhbmncnrl"; depends=[]; }; + normalr = derive2 { name="normalr"; version="0.0.3"; sha256="1ydlp6nbldq7sq60zdlvqah43xdfvx5nyiqaq2m5vgma6yny930x"; depends=[ddR magrittr MASS purrr shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; normwhn_test = derive2 { name="normwhn.test"; version="1.0"; sha256="1kr45bfydk40hgdg24i2f28cdaw65hg9gmsgv4lsvvr2m3r74vi6"; depends=[]; }; nortest = derive2 { name="nortest"; version="1.0-4"; sha256="17r0wpz72z9312c70nwi1i1kp1v9fm1h6jg7q5cx1mc1h420m1d3"; depends=[]; }; + nortestARMA = derive2 { name="nortestARMA"; version="1.0"; sha256="170dqxaln51snqzqjwagd16f2x4aarqg3xsim0gbvfqlv43sksb7"; depends=[astsa]; }; nose = derive2 { name="nose"; version="1.0"; sha256="17l78vmfqc22inq6zaqpnk2m91wp0nfjbbwfcpfqykf8lk9ipqna"; depends=[]; }; + not = derive2 { name="not"; version="1.0"; sha256="1hwrka8a5jygm3zjh5jhzjx2bvdqip7pb5009vkk7k0sp8m760kq"; depends=[]; }; + notifier = derive2 { name="notifier"; version="1.0.0"; sha256="1yi99ja8xdg771fn0brz5qz5p9kcbspwjx272lvjvw26lw7gaw3f"; depends=[]; }; notifyR = derive2 { name="notifyR"; version="1.02"; sha256="0jx76ic5r1crcgg0n0yqnka0gwniflfxakh838a98j9wb11wi6h5"; depends=[RCurl rjson]; }; + notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; novelist = derive2 { name="novelist"; version="1.0"; sha256="0wzx0vkqvl9sfhbbrzylsxhm3qmjj5w8sy5w6gvd104fn84d49yk"; depends=[]; }; noweb = derive2 { name="noweb"; version="1.0-4"; sha256="17s65m1m8bj286l9m2h54a8j799xaqadwfrml11732f8vyrzb191"; depends=[]; }; np = derive2 { name="np"; version="0.60-2"; sha256="0zs1d4mmgns7s26qcplf9mlz9rkp6f9mv7abb0b9b2an23y6gmi5"; depends=[boot cubature]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; - nparACT = derive2 { name="nparACT"; version="0.3"; sha256="0984s2fb989z94x8jzmmp4zh0hy8ji74hzqqiv4145s9fb4rvn64"; depends=[ggplot2 stringr zoo]; }; + npROCRegression = derive2 { name="npROCRegression"; version="1.0-4"; sha256="1w635wqkkbw5csrzjdyim6qxp5rvrlik260wp9iarh97rs5jgm53"; depends=[lattice]; }; + nparACT = derive2 { name="nparACT"; version="0.7"; sha256="0ia7s4gcqvcx02gybzizf6dsv75graknsjq7m74iplb2v6rzyywj"; depends=[ggplot2 stringr zoo]; }; nparLD = derive2 { name="nparLD"; version="2.1"; sha256="1asq00lv1rz3rkz1gqpi7f83p5vhzfib3m7ka1ywpf2wfbfng27n"; depends=[MASS]; }; nparcomp = derive2 { name="nparcomp"; version="2.6"; sha256="111ypwyc885lvn64a5sb2k552j6wr3iihmhgx5y475axdiva5pzf"; depends=[multcomp mvtnorm]; }; - npbr = derive2 { name="npbr"; version="1.2"; sha256="0l6r9cwrhbi37p8prrjcli7rpvlxgzma2m1wqck5y97wx1fnh4h3"; depends=[Benchmarking np quadprog Rglpk]; }; + nparsurv = derive2 { name="nparsurv"; version="0.1.0"; sha256="1qy9qkkpqrk49vjxbyvl25i4kfk0py6v64izd8lmaw38dynybpy2"; depends=[survival TH_data]; }; + npbr = derive2 { name="npbr"; version="1.4"; sha256="0h2lrjls89ivd3v1jksiq5jh57n20xgxaxcpwx8vqcvbpsdvfkd4"; depends=[Benchmarking np quadprog Rglpk]; }; + npcopTest = derive2 { name="npcopTest"; version="1.02"; sha256="1avjhm6rzyawwaabch6cxc7w2if4631jwrd2l8lyd3nk39kpr8ch"; depends=[]; }; npcp = derive2 { name="npcp"; version="0.1-6"; sha256="1ki9q49nyw21c6x3iwpd8aa152jc30idl0xx8f803j72yl21j47c"; depends=[]; }; npde = derive2 { name="npde"; version="2.0"; sha256="1cp4k7jvsw9rc6rrck902nqqjaf2c1nxjic7i9r3fd6yca1lgqb9"; depends=[mclust]; }; nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; - nplr = derive2 { name="nplr"; version="0.1-4"; sha256="03yq8f2bfdyi21d8kqcca0byjrw9a7pgp0c6fwpk1lnniaabzn2d"; depends=[]; }; + nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; npmlreg = derive2 { name="npmlreg"; version="0.46-1"; sha256="1gddl6diw8ix8vz7n1r4ps9cjx3q00mafpapskjk7pcz69m6hfv1"; depends=[statmod]; }; - npmr = derive2 { name="npmr"; version="1.0"; sha256="1467zjd56p5b23am40gzr1vly7v8hhqiybfvgbxw1mnrvxzlvfj2"; depends=[]; }; - npmv = derive2 { name="npmv"; version="2.3.0"; sha256="0719p38fh37lz7yclqp1l03pn8j051jm8hfzvxjd7m5kg0p083rh"; depends=[Formula]; }; + npmr = derive2 { name="npmr"; version="1.1"; sha256="1ss8ypvv6qcdxv7l3szivliwmhidmzi3572p3nz96ysndf56akl4"; depends=[]; }; + npmv = derive2 { name="npmv"; version="2.4.0"; sha256="04lfks2rlax59gxdnbgkpmk2vaax718z6hkgsvmyxf52iby6rvlr"; depends=[Formula]; }; nppbib = derive2 { name="nppbib"; version="1.0-0"; sha256="075jb13zckkh66jwdmdlq4d2drjcc3lkj26px3w79b91223yymf2"; depends=[]; }; - npregfast = derive2 { name="npregfast"; version="1.2.1"; sha256="0ydxz4if5i54b45qsymzk5zl3ym0q08brvia4czx9h2r78db2v0g"; depends=[ggplot2 gridExtra shiny]; }; - nproc = derive2 { name="nproc"; version="0.1"; sha256="0ddj4iarmm2wk56rlb9ifzip8j7cwfja1p8jsn2769x0b2mz2n1n"; depends=[ada e1071 glmnet MASS randomForest]; }; - npsf = derive2 { name="npsf"; version="0.1.6"; sha256="0zaz7yxb39x8c04bx5gzrryp9jn3sylk4gyv1nlrgqig8v7020qy"; depends=[Formula]; }; + npregfast = derive2 { name="npregfast"; version="1.4.0"; sha256="1p5hp8mld05p03lrgyqwdh5wg4qh7n2bqx9w5p7z4dvvh6h67nji"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; + nprobust = derive2 { name="nprobust"; version="0.0.1"; sha256="13fc84ahv2gid3b1iyyc151v10pafaxbbym3g891ivxglyw10zy1"; depends=[Rcpp RcppArmadillo]; }; + nproc = derive2 { name="nproc"; version="2.0.4"; sha256="1hbyf1n2s4wbd0206a69pf6akyxv6gx3dvifn26nizas3iaccp48"; depends=[ada e1071 glmnet MASS randomForest]; }; + npsf = derive2 { name="npsf"; version="0.2.0"; sha256="0cww1fi0amgc9n1hbfy3z7xgwrbcdwvsr2d6l8lpsr1bdcpgbjzv"; depends=[Formula]; }; npsm = derive2 { name="npsm"; version="0.5"; sha256="12jq6ygp3di5rknh7izrr3bxvpn6bqnj3jhfxzf29yf0bd86hzqk"; depends=[plyr Rfit]; }; - npsp = derive2 { name="npsp"; version="0.3-6"; sha256="1wiv4gp3y1c26xaq8zssias3j3h8mpb6izcmcarghvnfhj32l8jb"; depends=[quadprog]; }; + npsp = derive2 { name="npsp"; version="0.5-3"; sha256="0ck6iymfc73bzrifdc2sagcliz1yakqk1yv67a3ykha996jsrx99"; depends=[quadprog]; }; npst = derive2 { name="npst"; version="2.0"; sha256="1y5ij3nmh9pj6p97jpx75g26sk508mznr0l67cwj381zfb77hj1n"; depends=[]; }; npsurv = derive2 { name="npsurv"; version="0.3-4"; sha256="1z456q3vi9pndr2x8byq95hh4dv95hpgj1an6vxhnwlhbfwjdjlx"; depends=[lsei]; }; + nricens = derive2 { name="nricens"; version="1.3"; sha256="0wyr6bh8vhvvixqa8z2pmav94frskv5kvsf2y4yk2064ra65kjiz"; depends=[survival]; }; nsRFA = derive2 { name="nsRFA"; version="0.7-12"; sha256="182zshwyg0l6shb5wcwibqygxs8qmgma9c4s683za8q3f9l94aqj"; depends=[]; }; nscancor = derive2 { name="nscancor"; version="0.6"; sha256="1wkk08h8yz2mzgvmq0vr30iiczpbp0304vjwxqgsa3h240m4awsm"; depends=[]; }; + nse = derive2 { name="nse"; version="1-00.17"; sha256="16zam539ir29m9ixyim9bqnf3sdy8aaaaly3wf96i3csgysf8pjc"; depends=[coda mcmc mcmcse np Rcpp sandwich sapa]; }; nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; }; nsgp = derive2 { name="nsgp"; version="1.0.5"; sha256="0piajjz3r71dnjw7lwpjhbaygxcrbbxfvhf8p3n2izyr2pw5fml9"; depends=[MASS]; }; nsprcomp = derive2 { name="nsprcomp"; version="0.5"; sha256="1rrjiwkpiaqlp27s5xfd6jwmmpzgxm5d7874gp33511wa0vrhnnf"; depends=[]; }; + nucim = derive2 { name="nucim"; version="1.0.0"; sha256="0fyapw6f5wkybr4mwmqpk9wy349j5sa4q26pci1bsy4ly2wf9wx6"; depends=[bioimagetools EBImage fields stringr]; }; nullabor = derive2 { name="nullabor"; version="0.3.1"; sha256="0anwla6x9y2i7yd6r0yi1xhy0zfqwfpp5h1f18gji11nmiva9d81"; depends=[dplyr fpc ggplot2 MASS moments plyr]; }; - numDeriv = derive2 { name="numDeriv"; version="2014.2-1"; sha256="114wd0hwn2mwlyh84hh3yd2bvcy63f166ihbpnp6xn6fqp019skd"; depends=[]; }; - numOSL = derive2 { name="numOSL"; version="1.9"; sha256="1vz7hvd79v4iydhq3jmpigsymd2disdkkw28svzb68zdiccbxfnd"; depends=[]; }; - numbers = derive2 { name="numbers"; version="0.6-1"; sha256="1mqcps33az5a7vd2czx7nll87yciwmxngnilf16iz4yf9p59gny5"; depends=[]; }; + numDeriv = derive2 { name="numDeriv"; version="2016.8-1"; sha256="07ni52rwiap4wilfz94w5mrqaxr59axxmgn57857ip4p6qkiss0v"; depends=[]; }; + numOSL = derive2 { name="numOSL"; version="2.1"; sha256="1my1pb23qafh96kk5vyjgks06g8pk9pkhk9rnqx76y5fdb5m8yy1"; depends=[]; }; + numbers = derive2 { name="numbers"; version="0.6-6"; sha256="05qmv12b90vkzf2b50qjnp8hja6rms91jj97knx70n2yhpb2lnd9"; depends=[]; }; nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; }; nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; }; nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; - nycflights13 = derive2 { name="nycflights13"; version="0.1"; sha256="15bqaphxwqpdzr4bkn6qgbjb3knja5hk34qxjd6xhpjzkgfs5c0b"; depends=[]; }; + nycflights13 = derive2 { name="nycflights13"; version="0.2.2"; sha256="1857pwyhb5gvbdxv934nlc50n4ai7njm89js7b7ywfg7mhgha4yc"; depends=[tibble]; }; + nzelect = derive2 { name="nzelect"; version="0.2.0"; sha256="1ijyvqm8yz3wib8wyibcxqx6p848xgxjrl84ppwq0nx0ic0vizbm"; depends=[]; }; + nzpullover = derive2 { name="nzpullover"; version="0.0.2"; sha256="0c50854dhvjmhh8c34w9w0r8v8wk5j8bi6j81m5wpcd2jxrkbw4f"; depends=[]; }; + oXim = derive2 { name="oXim"; version="1.1.2"; sha256="1270m0mng8sz8bsa8gi0pkp2znglv2sqzhq3s09mj73c0l96pzm7"; depends=[gstat imagine R_matlab sp]; }; oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; }; oaPlots = derive2 { name="oaPlots"; version="0.0.25"; sha256="0c5ig1ar02vg38pjjmp3gd53ij1j7pzajs0zrlfajz141qkv2ysr"; depends=[ggplot2 oaColors]; }; - oai = derive2 { name="oai"; version="0.2.0"; sha256="14vimvaba5fxcfl2n8dqa78jw51ra3nvqmw8js5x0d81yp47yaga"; depends=[httr plyr stringr xml2]; }; + oai = derive2 { name="oai"; version="0.2.2"; sha256="0q1w29wrppi5sfabdw8px7zr92bgri3jhy0y7dhi46xggxfg9vm1"; depends=[httr plyr stringr tibble xml2]; }; oapackage = derive2 { name="oapackage"; version="2.0.23"; sha256="1kkwxwgb23i4m8dlh1ybskardwf8ql0m18cv9c5zi1qd2vkk5dx0"; depends=[RcppEigen]; }; - oasis = derive2 { name="oasis"; version="0.99.5"; sha256="03jcy766bj3z9km2jlf2wpjkfvkryffkjlvchpyh5hgfkm4vs2cv"; depends=[fslr oro_nifti]; }; + oasis = derive2 { name="oasis"; version="2.1"; sha256="0yh54vip2bx1ifpc3d7acr9488i3w9iyh3gl209fivnrn555plqf"; depends=[fslr mmand neurobase oro_nifti]; }; oaxaca = derive2 { name="oaxaca"; version="0.1.3"; sha256="0pi3lrvx5cjl35hww9w8bwh0720zibph636c2ay38k83lzf3kcb8"; depends=[Formula ggplot2 reshape2]; }; - obAnalytics = derive2 { name="obAnalytics"; version="0.1.0"; sha256="0k8zb81wf51kcrnlw9616vfbm150x17ggxhd23fm71a1n3292xvc"; depends=[ggplot2 reshape2 zoo]; }; + obAnalytics = derive2 { name="obAnalytics"; version="0.1.1"; sha256="1l4ld120qk0adycmvqrkzada10kb7z03lj2njzqagmacl1z8598f"; depends=[ggplot2 reshape2 zoo]; }; objectProperties = derive2 { name="objectProperties"; version="0.6.5"; sha256="0wn19byb1ia5gsfmdi6cj05pnlxbr3zcrjabjg3g1d7b58nz7wlh"; depends=[objectSignals]; }; objectSignals = derive2 { name="objectSignals"; version="0.10.2"; sha256="1rcgfq1i3nz2q93vv4l069f3mli1c6fd5dhhhw1p7cc4sy81008w"; depends=[]; }; obliclus = derive2 { name="obliclus"; version="0.9"; sha256="000r1dx4zbgjxrfs66c1yazm0w6q2z0z1scf45g2qj5ykcm9ylma"; depends=[]; }; @@ -5883,122 +7337,159 @@ in with self; { obliqueRF = derive2 { name="obliqueRF"; version="0.3"; sha256="1bwlgv820mmpc6vg26bsdlfy2p78586i3y42hkzbw3z1fmwq3pz5"; depends=[e1071 mda pls ROCR]; }; obs_agree = derive2 { name="obs.agree"; version="1.0"; sha256="191xshnrncjqzwd2rdq334vsx0338q3y3k1nbm04hdaysbnla9jv"; depends=[]; }; obsSens = derive2 { name="obsSens"; version="1.3"; sha256="1vfm1mzsycwkqa39vf3fcdv1s6adps9hw1rxlvl8v9kq746hcabw"; depends=[]; }; - oc = derive2 { name="oc"; version="0.95"; sha256="1zmy34fsqcd4rq0v72r514k6gm3jmf9a5zv4m6kj09hl89xvqsci"; depends=[pscl]; }; + observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; + oc = derive2 { name="oc"; version="0.96"; sha256="110pf3rqcab0671djx25jwwl8rbaskcd2lrcv56d786j693y2ash"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.0"; sha256="1rpgq6mqrdzz52ln897f5k8yyz5i14s3lxqmy3nwsxf3q2bdf3yh"; depends=[]; }; - oce = derive2 { name="oce"; version="0.9-18"; sha256="1vqfw1y6dj094cn9jy0pq39r1v2przqdrl1add6amssgxyh3bak1"; depends=[gsw]; }; + oce = derive2 { name="oce"; version="0.9-20"; sha256="1pckxrkkgb22rrm1q9j2xijnbhk6j260rq8pvmi02l8mdx6l99l5"; depends=[gsw]; }; ocean = derive2 { name="ocean"; version="0.2-4"; sha256="1554iixfbw3k6w9xh3hgbiygszqvj5ci431cfmnx48jm27h2alqg"; depends=[ncdf4 proj4]; }; + oceanmap = derive2 { name="oceanmap"; version="0.0.2"; sha256="0pbwja7m0ng2j2147sgc07v3q80xmj3bwidvqksigklka4zx822q"; depends=[abind extrafont fields mapdata maps maptools marmap ncdf4 plotrix raster sp]; }; ocedata = derive2 { name="ocedata"; version="0.1.3"; sha256="0lzsyaz8zb6kiw86fnaav2g2wfdhyicxvm81ly5a9z4mjch3qj02"; depends=[]; }; + ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; - odds_converter = derive2 { name="odds.converter"; version="1.3"; sha256="0pa0figal4p42iy83lfj9fmnlakac7blfbmcic67qd19bdn88jz2"; depends=[]; }; - odeintr = derive2 { name="odeintr"; version="1.3"; sha256="12y5hr6f7bj3aqj4gd0hlj495c5163jn0liksspk5jpqcmpsgdg3"; depends=[BH Rcpp]; }; + odbc = derive2 { name="odbc"; version="1.0.1"; sha256="0i047xpp481r5lsmrk853fcwhhvanwl6xdbddjgypd0mf0c11ng0"; depends=[BH blob DBI Rcpp]; }; + odds_converter = derive2 { name="odds.converter"; version="1.4"; sha256="13y3s04l2jvjhn1i4syz4y3q42ba8br0sp3mks5f5h4cp8w4j3wy"; depends=[]; }; + oddsratio = derive2 { name="oddsratio"; version="0.3.1"; sha256="0vpqhb6zady7facbrv5g3idxnzwy65237w6wfdxafsx40vc7bcig"; depends=[cowplot ggplot2 MASS mgcv]; }; + odeintr = derive2 { name="odeintr"; version="1.7.0"; sha256="0qjgiik1vg4cp0fh07zabbmlxq12074nqczqxgf49sgvjgmasxx0"; depends=[BH Rcpp]; }; odfWeave = derive2 { name="odfWeave"; version="0.8.4"; sha256="1rp9j3snkkp0fqmkr6h6pxqd4cxkdfajgh4vlhpz56gr2l9j48q5"; depends=[lattice XML]; }; odfWeave_survey = derive2 { name="odfWeave.survey"; version="1.0"; sha256="0cz7dxh1x4aflvfrdzhi5j64ma5s19ma8fk9q2m086j11a1dw3jn"; depends=[odfWeave survey]; }; - oem = derive2 { name="oem"; version="1.02.1"; sha256="0z9k0jhpp5dayyin6v8p26rgl8s983hnpsk195c9z458i7nbmrpd"; depends=[Rcpp RcppArmadillo]; }; - oglmx = derive2 { name="oglmx"; version="1.0.3"; sha256="01r0j7d2l4pf61x2q4pa6pnkv2yzsk2jb62cvh0jz2rhkpvqjniq"; depends=[maxLik]; }; + oec = derive2 { name="oec"; version="2.2"; sha256="11ldy303xkl7qaqvlzfwr7qxwnz06n39mkjvrj0sca6xzw12lq5d"; depends=[curl data_table jsonlite plyr servr]; }; + oem = derive2 { name="oem"; version="2.0.4"; sha256="1n9b8zw4d3ydirrrl4n14as5x8jc10bzfza4zs4gn6ljk5p3lsci"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; + oglmx = derive2 { name="oglmx"; version="2.0.0.1"; sha256="03lsgdz2pjykzcv7k9r940rgh7qh7vn651nrshx1r0b63mh9cqsj"; depends=[maxLik]; }; + oii = derive2 { name="oii"; version="1.0.1"; sha256="0w1afajkr5vly9qi1r2iz1ikbvyvy6hcbc10g8s7g6zi8db5dgf4"; depends=[Deducer gmodels rapportools]; }; + okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; - olctools = derive2 { name="olctools"; version="0.2.1"; sha256="0hnsv5b283lscj3b3pygjzyghc0glpavpijl7drv59ka9914ixl6"; depends=[Rcpp]; }; + olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; omd = derive2 { name="omd"; version="1.0"; sha256="0s1wcgivqapbkzjammga8m12gqgw113729kzfzgn02nsfzmsxspv"; depends=[]; }; - omics = derive2 { name="omics"; version="0.1-4"; sha256="1klzh431lcw2r8ylvqzl7xcyvr7bqapk3v15slfn9n27bbaljicp"; depends=[lme4 pheatmap]; }; + omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; onemap = derive2 { name="onemap"; version="2.0-4"; sha256="00xmhm5qy0ycw0mnlyl20vfw0wxmpb36f07k0jj92c4zbpwjiygx"; depends=[tkrplot]; }; - onewaytests = derive2 { name="onewaytests"; version="1.1"; sha256="13d2jcj8sb3gvv0k73bcaplsf2i2hf8fswcnvykpnps9lb6kvn0v"; depends=[]; }; + onewaytests = derive2 { name="onewaytests"; version="1.2"; sha256="1fscyffmvlasx56hxlk2b60fk0scfjbb3yk5q74ffszk4xvqbrzg"; depends=[]; }; onion = derive2 { name="onion"; version="1.2-4"; sha256="0x3n9mwknxjwhpdg8an0ilix5cb8dyy5fqnb6nxx7ww885k0381a"; depends=[]; }; - onlinePCA = derive2 { name="onlinePCA"; version="1.3"; sha256="11dp1fxb26rzv2743wgwyrc35bslm57yi3a57r7wjixkp9vf9kkb"; depends=[rARPACK Rcpp RcppArmadillo]; }; + onlineCPD = derive2 { name="onlineCPD"; version="1.0"; sha256="1hdj9wizf0b2vs481fnx80m4b7rqp0bl14xbxfcawlk9d82q2mh2"; depends=[ggplot2 gridExtra reshape2 scales]; }; + onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; onls = derive2 { name="onls"; version="0.1-1"; sha256="0m7pnlzkqwzi6jncjzxzfvznipd4wg03zd9fc0ymwm9jvhm4p14g"; depends=[minpack_lm]; }; - ontologyIndex = derive2 { name="ontologyIndex"; version="1.0"; sha256="1x7x5smfxprlpsd5jjzh7rqcpiih2plmlnjjl9ww6vbkcdlk783d"; depends=[]; }; - ontologyPlot = derive2 { name="ontologyPlot"; version="1.0"; sha256="0z8bppcpc8d9rzk3h3c5c9pa1hnhdymx77d00lji2nldrlnsil89"; depends=[functional magrittr ontologyIndex Rgraphviz]; }; - ontologySimilarity = derive2 { name="ontologySimilarity"; version="1.0"; sha256="0wqdsss43xfsm90jr7j07yrmpcj3xm0ax8jaad6cqlq60ywm2a8n"; depends=[ontologyIndex Rcpp]; }; + ontologyIndex = derive2 { name="ontologyIndex"; version="2.4"; sha256="168m4jdwbzv8lpimx9063306691hnfdjmdhb5y8195d9vcq049jr"; depends=[]; }; + ontologyPlot = derive2 { name="ontologyPlot"; version="1.4"; sha256="0sj1jg9lr1w3ahzw7fj86vp2bnvf4nq0x3hiqb3hzngwyj9bykpn"; depends=[ontologyIndex paintmap Rgraphviz]; }; + ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.2"; sha256="1g1ag2bnfczdx2xyswrc9xbl9krnyibb4639wynm7c0lf2876964"; depends=[ontologyIndex Rcpp]; }; opefimor = derive2 { name="opefimor"; version="1.2"; sha256="06j5diwp42x7yrhclwyiimfwmx66y23dkwlnkd2lj2zcsgam9s8w"; depends=[]; }; openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-2"; sha256="1472gg651cdd5d9xjxrzl3k7np77liqnh6ysv1kjrf4sfx13pp9q"; depends=[rJava]; }; - openVA = derive2 { name="openVA"; version="1.0"; sha256="1bqfysxx5qjdz0p7kmvjjbivnh384zq7z1nxidn33kr1wnsnvmcq"; depends=[ggplot2 InSilicoVA InterVA4 Tariff]; }; - openair = derive2 { name="openair"; version="1.7-3"; sha256="1g63jjsdi4658qkjwzdhdd11s45fm0y5xp975i0sd9vkxgiffxg4"; depends=[cluster dplyr hexbin lattice latticeExtra lazyeval lubridate mapdata mapproj maps mgcv plyr RColorBrewer Rcpp reshape2 RgoogleMaps]; }; - opencpu = derive2 { name="opencpu"; version="1.5.4"; sha256="1sn8hvq0bwlrb3bd7ril1mynhfjbfkgrgx5f515767gav9hv1v4m"; depends=[brew devtools evaluate httpuv httr jsonlite knitr openssl]; }; + openVA = derive2 { name="openVA"; version="1.0.3"; sha256="09wbhl0g6q1rhi6yr3wpbns4ik7jalpagacn6am09i6zvmz8745j"; depends=[ggplot2 InSilicoVA InterVA4 nbc4va Tariff]; }; + openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; + openair = derive2 { name="openair"; version="2.0-0"; sha256="1cwlk0vi510065p1rb70h5rsprd55xfyb7ym8mv93iwvqgwxhx5j"; depends=[cluster dplyr hexbin lattice latticeExtra lazyeval lubridate mapproj maps MASS mgcv plyr RColorBrewer Rcpp reshape2]; }; + opencage = derive2 { name="opencage"; version="0.1.0"; sha256="0fx5l5rzl9c7df03bvxcykfcrqjl2ld5k49kzsc5d157gxynnh56"; depends=[dplyr httr jsonlite memoise]; }; + opencpu = derive2 { name="opencpu"; version="1.6.1"; sha256="01m9zrbyishf4qbsw6fnfihnw4470qvv6br63zbzj2c7jzpi0v6g"; depends=[brew devtools evaluate httpuv httr jsonlite knitr openssl protolite]; }; openintro = derive2 { name="openintro"; version="1.4"; sha256="1k6pzlsrqikbri795vic9h191nf2j7v7hjybjfkrx6847c1r4iam"; depends=[]; }; - openssl = derive2 { name="openssl"; version="0.9.2"; sha256="1dbsaciz39zvsmcyxkmpfm5yxzrpw2iv2nb86525wn80q0cyv0cb"; depends=[]; }; + openssl = derive2 { name="openssl"; version="0.9.6"; sha256="0ffwllii8xl6sa2v66134g0fwaw1y3zn3mvaa4nrc120vv5d3mkd"; depends=[]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; - openxlsx = derive2 { name="openxlsx"; version="3.0.0"; sha256="1vx5qmhlyrlwrswbhd95jjcsldcdpdp7gs341dmham26sdzdx658"; depends=[Rcpp]; }; + openxlsx = derive2 { name="openxlsx"; version="4.0.0"; sha256="1jz75kxpbbdw3bf9a49fih4wlk36nki3nr8yq7v9n31qzyb5k3qy"; depends=[Rcpp]; }; + opera = derive2 { name="opera"; version="1.0"; sha256="0p2wg3srg088l420ykrq0wqvzh1mp6l753rdw35f7kdmaj08mqfq"; depends=[quadprog quantreg RColorBrewer]; }; operator_tools = derive2 { name="operator.tools"; version="1.4.4"; sha256="1ridxi3pbylb4flfgn371n1v9796rnd1ndxhh6ijyzpysqqmwi08"; depends=[]; }; operators = derive2 { name="operators"; version="0.1-8"; sha256="0zgcv2q46qyqv4dhbd33s4044zjw38w8dqfpzs0c1lxjpkil3dnx"; depends=[]; }; ops = derive2 { name="ops"; version="1.0"; sha256="0cvwyn5sz5lx8sin8w4k8ymslfl4nfaa012a9vcl2hvp4850rk25"; depends=[]; }; optAUC = derive2 { name="optAUC"; version="1.0"; sha256="0j1llzqa3n7kqw3i5bb7284z0hi6s5jbjfl9zap0l7xf6hg4x1dn"; depends=[MASS]; }; optBiomarker = derive2 { name="optBiomarker"; version="1.0-27"; sha256="1kkj602d4klwyd8kylawgfysg8dlp2g6j7afkppzv5x8mbhs5ji4"; depends=[e1071 ipred MASS Matrix msm randomForest rgl rpanel]; }; - optCluster = derive2 { name="optCluster"; version="1.0.1"; sha256="13vph76wmhr7rg036fvn7i9nfanhxg3y5rnycrniybz3ny1q5paf"; depends=[cluster clValid gplots kohonen MBCluster_Seq mclust RankAggreg]; }; - optR = derive2 { name="optR"; version="1.1.1"; sha256="1lr5n0g21jayb27b2j8zh16f1k28avzg7k2mwyc7rjhhxv8k9w1j"; depends=[]; }; - optextras = derive2 { name="optextras"; version="2013-10.28"; sha256="1sm025xwrpm5c63l4kiqfndxb7rwq2bcmidy4k2b24g5a8x7cpfv"; depends=[numDeriv]; }; + optCluster = derive2 { name="optCluster"; version="1.1.0"; sha256="1p4mwnarai1kakyb0w8z46c3lwnwcndvfxspywh72mj35wfrdbc8"; depends=[cluster clValid gplots kohonen MBCluster_Seq mclust RankAggreg]; }; + optDesignSlopeInt = derive2 { name="optDesignSlopeInt"; version="1.1"; sha256="0vpm4359rq5v231k63vgaac6iv2ybfkcpy59n86djb710b3h2qcn"; depends=[MCMCpack neldermead]; }; + optR = derive2 { name="optR"; version="1.2.5"; sha256="0q7jf4m0gzm11izl5lff17pvr855smqmc6zzi1bc7m6h3z865l32"; depends=[]; }; + optband = derive2 { name="optband"; version="0.2"; sha256="0a0kr8h4asziq66k1556mabwjyib84v0arn4jmb0gjzxjrg6rk2f"; depends=[LambertW]; }; + optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; + optextras = derive2 { name="optextras"; version="2016-8.8"; sha256="03wqz16q8kn0ndk241h541fa0g5y0nrfg17vph85cm5xvzdd14cc"; depends=[numDeriv]; }; optiRum = derive2 { name="optiRum"; version="0.37.3"; sha256="1g3kgfwa7ckh45v14qdi3gq9vy0zfpjaffcgpfapyylrsrnspy3f"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; }; + optiSel = derive2 { name="optiSel"; version="0.1"; sha256="0jr1gi31la8lnz1s7xyk4bc650kf374v2bha638fzg2cx2zqkiif"; depends=[alabama cccp GENLIB kinship2 MASS Matrix nadiv nloptr pedigree pspline Rcsdp stringr]; }; + opticut = derive2 { name="opticut"; version="0.1-0"; sha256="0dh7zw8yrzxw3vfzfm776rdhfczmlwfs3fw568s5cc60xsn8fa93"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; }; optigrab = derive2 { name="optigrab"; version="0.7.3"; sha256="1vd4b6mh4a137nvsbpx71jibfd67va1m8iya1gasqiflm6qzszcx"; depends=[magrittr stringi]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; + optimization = derive2 { name="optimization"; version="1.0-1"; sha256="1smmpv9ahv2fdfqxlpp42wzg08xhhj9niay8wsd49799xvpcw1jg"; depends=[colorspace Rcpp]; }; + optimr = derive2 { name="optimr"; version="2016-8.16"; sha256="02dgwkcjhf6ciwb6x6gyk7nn4v2jras7l1icfd4pjbypiapwnck9"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; }; optimsimplex = derive2 { name="optimsimplex"; version="1.0-5"; sha256="1aiq0w2zlra3k6x4hf2rglb6bj8w25yc8djnpgm508kkrbv3cc17"; depends=[optimbase]; }; optimx = derive2 { name="optimx"; version="2013.8.7"; sha256="0pbd7s02isj24npi4m1m1f008xqwzvwp3kn472wz8nmy4zrid30s"; depends=[BB dfoptim minqa numDeriv Rcgmin Rvmmin setRNG svUnit ucminf]; }; optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; }; optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; }; - optmatch = derive2 { name="optmatch"; version="0.9-5"; sha256="1dgsxd6w2fgy07yzihbrg30ya0lmy146m70cfaaxr6pnr8d0rszr"; depends=[digest Rcpp RItools survival]; }; + optmatch = derive2 { name="optmatch"; version="0.9-7"; sha256="1ps3qd7kidi0n1m9nxspz03sdw7p3lcg31q3p7c13l3vb226i5yj"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.3.2"; sha256="1g8as89r91xxi5j5azsd6vrfrhg84mnfx2683j7pacdp8s33radw"; depends=[getopt]; }; - optpart = derive2 { name="optpart"; version="2.2-0"; sha256="1v90lfma06q10h6g43fh7pq1dpgdgcqsgwd73zf4z1ksq3pcx6wh"; depends=[cluster labdsv MASS plotrix]; }; + optpart = derive2 { name="optpart"; version="2.3-0"; sha256="125b9sfdk4bdcj1vq5rxlrskv1zra31x8d96pdxnqvcnkmwxm4zh"; depends=[cluster labdsv MASS plotrix]; }; optrees = derive2 { name="optrees"; version="1.0"; sha256="1zqpjii8dsfs98n58qpif81ckvyxkr0661svhlbgzi19xb2vszqs"; depends=[igraph]; }; + opusminer = derive2 { name="opusminer"; version="0.1-0"; sha256="1m4gsjylz58pbmhgcy4l9hqdsgy8ra1zg0d3rb6h2qiwfyfm0yh4"; depends=[arules Matrix Rcpp]; }; orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; }; ora = derive2 { name="ora"; version="2.0-1"; sha256="0albxqma220rnrpfdq3z9cawr83q1a0zzczbbcy4nijjm4mswphy"; depends=[DBI ROracle]; }; - orca = derive2 { name="orca"; version="1.1"; sha256="138qqjklwd3g4dfg9j2438kzpsdc7sf8qdl8ha4kd276n71vkfrh"; depends=[]; }; + orca = derive2 { name="orca"; version="1.1-1"; sha256="1wd5nh2vh6j1rp78hbw17qipi67f0wimrbkiarak8f7k5pfiy1zn"; depends=[]; }; orclus = derive2 { name="orclus"; version="0.2-5"; sha256="0kkxhyqjxib862npinzf3mipqg5imgscdmb5wqm8wf2j2mbislsx"; depends=[]; }; - orcutt = derive2 { name="orcutt"; version="1.1"; sha256="0hz7aw4jpf4l7ihj4bjnjv1m8ynr71n4l12x046qj8y7mrnl9p4k"; depends=[]; }; + orcutt = derive2 { name="orcutt"; version="2.0"; sha256="07190v3llnpkvrgsd33bbdywlvmqqgysn0p4y8krb3wgxx2dv6kg"; depends=[lmtest]; }; ordBTL = derive2 { name="ordBTL"; version="0.8"; sha256="09x3zfmss4fsh3rjghgmpv8y34dnkz4mw696b3k3nvlgk55a1423"; depends=[caret gtools VGAM wikibooks]; }; + ordDisp = derive2 { name="ordDisp"; version="1.0.1"; sha256="1vjki73h8933z36ikwmjn84ldz154mahp2jkd9cbj5n6xsi47fnw"; depends=[VGAM]; }; ordPens = derive2 { name="ordPens"; version="0.3-1"; sha256="0yzf3qzi4p7xqimihjvr0wkdvj3sy9n3wc86bf4bjbavniq6m69r"; depends=[grplasso mgcv RLRsim]; }; + ordcrm = derive2 { name="ordcrm"; version="1.0.0"; sha256="1hy24s23l099b21w5j3p2f0748s8xmhxhslfp65fg7ycwda5qsyw"; depends=[rms]; }; orddom = derive2 { name="orddom"; version="3.1"; sha256="165axs15fvwhrp89xd87l81q3h2qjll1vrwcsap645cwvb85nwsh"; depends=[psych]; }; orderbook = derive2 { name="orderbook"; version="1.03"; sha256="0dlvjrzdhhh8js4g1lvxs46q7fdxfxavxnb4nj6xlwca75i51675"; depends=[hash lattice]; }; orderedLasso = derive2 { name="orderedLasso"; version="1.7"; sha256="0vrh89nrmpi8xscvambcb1y70gqqi5819a2gxh02h4pnyjn8axql"; depends=[ggplot2 Iso Matrix quadprog reshape2]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; ordinal = derive2 { name="ordinal"; version="2015.6-28"; sha256="0lckjzjq2k8rlibrjf5s0ccf17vcvns5pgzvjjnl3wibr2ff4czs"; depends=[MASS Matrix ucminf]; }; - ordinalCont = derive2 { name="ordinalCont"; version="0.4"; sha256="1inms74l4zx6r526xd0v79v18bcqa76xwsgfvap0fizyv2dvgpim"; depends=[boot fastGHQuad ucminf]; }; - ordinalNet = derive2 { name="ordinalNet"; version="1.4"; sha256="06sbb7x46f9cp1dhvf0x3kzpy05766yi15kw7cpzpmfz1pvk9ixs"; depends=[]; }; - ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.2"; sha256="1rbn2mb516hdr0chny1849m1aq0vb0vmr636b4fp914l5zh75vgi"; depends=[]; }; - ore = derive2 { name="ore"; version="1.3.0"; sha256="08fdqppf2nm5h367zr2v9323p1v5qm8vby5y1ygjrwqgankpjcjg"; depends=[]; }; - ores = derive2 { name="ores"; version="0.1.0"; sha256="1k5qcdd92vnx2vclpgk64kkfi389bl1nvwafffgdy7jbgyp65rh4"; depends=[httr]; }; + ordinalCont = derive2 { name="ordinalCont"; version="1.0.2"; sha256="0dj98ziwaka1a2bra6zzqqwmw9f0ki5iyzibslix0brk9v8lq3km"; depends=[boot]; }; + ordinalNet = derive2 { name="ordinalNet"; version="1.5"; sha256="1iy8vgx6znnazhzx7m649hbikliwv9j5c5nrr0jrbdl28d84qapl"; depends=[]; }; + ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.3"; sha256="0ki91l6vvfxpzq7zgl3d08r5pzx47jxkgf7g0g95580xx2q7n7zx"; depends=[survival]; }; + ore = derive2 { name="ore"; version="1.5.0"; sha256="0bvpi4gz71qgi21byax6np0ivr2a9b9qnzywhl06rbkx9l0r2yfn"; depends=[]; }; + ores = derive2 { name="ores"; version="0.2.0"; sha256="164z4r4894r8j5vigh5rsqwkslmgdwj0rsl088fq0hb40p3w1nd0"; depends=[httr]; }; orgR = derive2 { name="orgR"; version="0.9.0"; sha256="1q4qbwnbhmja8rqiph7g7m4wxhzhk9mh91x1jgbnky8bs4ljdgrx"; depends=[data_table ggplot2 ggthemes lubridate stringr]; }; orientlib = derive2 { name="orientlib"; version="0.10.3"; sha256="1qi46hkz73b8722zc3w6wvsq1ydlk37yxn9rd1dqygqbs1svkmvv"; depends=[]; }; + originr = derive2 { name="originr"; version="0.2.0"; sha256="06n5qshk4dq6ac4prnhzymz7gcmp6m2zdc8d9d13ii7n7xa0ymx2"; depends=[data_table httr jsonlite taxize xml2]; }; orloca = derive2 { name="orloca"; version="4.2"; sha256="14accc5kcvvin5qav6g3rx10by00r0b8970nd09w4c09nhwyblcd"; depends=[]; }; orloca_es = derive2 { name="orloca.es"; version="4.1"; sha256="0nzhg7vzfxlmryw5ijww8z2b1g9cmgcgzi3gsgigsgn4shnc2hni"; depends=[orloca]; }; oro_dicom = derive2 { name="oro.dicom"; version="0.5.0"; sha256="05dmhfglp76apyilwicf3n2ylyjhp1gq6b9bnzsiiblpjnfpia43"; depends=[oro_nifti]; }; - oro_nifti = derive2 { name="oro.nifti"; version="0.5.2"; sha256="0zf5lb51b81602lwg118x3j2myrbrm6wjaflbpxxzqigz4q60rkg"; depends=[abind bitops]; }; + oro_nifti = derive2 { name="oro.nifti"; version="0.7.2"; sha256="00s5ml1wmxly6mjnhkxjigivjnylyxq39p2zwzhk8vaj5llk2x1q"; depends=[abind bitops RNifti]; }; oro_pet = derive2 { name="oro.pet"; version="0.2.3"; sha256="06agl6rvd01h6mnilj0vl52dxw6b7b41vl6vmbvaq5qy1wmiaiz7"; depends=[oro_dicom oro_nifti]; }; orsifronts = derive2 { name="orsifronts"; version="0.1.1"; sha256="1js4q2s1mn263x8szl5q47ajfxv9lsjd5zyphwyhbkqrnd8ijd3w"; depends=[sp]; }; orsk = derive2 { name="orsk"; version="1.0-2"; sha256="0h0h1z8ddn2nkc7c6c4s39sxwvav562p0lcwy13441rrlibywbhq"; depends=[BB BHH2]; }; orthogonalsplinebasis = derive2 { name="orthogonalsplinebasis"; version="0.1.6"; sha256="07rbd0fhs2gsk7wj41y2h7wf6pfg324vzv2al753d8kqyx5ns2dj"; depends=[]; }; orthopolynom = derive2 { name="orthopolynom"; version="1.0-5"; sha256="1gvhqx6jlh06hjmkmbsl83gri0gncrm3rkliyzyzmj75m8vz993d"; depends=[polynom]; }; osDesign = derive2 { name="osDesign"; version="1.7"; sha256="0y68pnsmq4nlmfsn28306q2kxab200pirr6ha0w4himzpnw1sil3"; depends=[]; }; + osc = derive2 { name="osc"; version="1.0.0"; sha256="08ac64xqq3diw9xkialvxjvqk5khd3kjdxdi3zic2if05i3rb4ns"; depends=[raster]; }; osd = derive2 { name="osd"; version="0.1"; sha256="1py9p15nrcydr8w9ilxkxabiz9zlqnls8xn9avjkxd8x6602jx6p"; depends=[JADE nnls]; }; + osi = derive2 { name="osi"; version="0.1.0"; sha256="1wzkvsqifk0g29jnpvykn26myq27pxll3glqlp74djkz0rbpv7aa"; depends=[httr]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; - osrm = derive2 { name="osrm"; version="2.0.0"; sha256="0sapp03i3dbvsfwvnzj3pwqbkrx73qgdaikpnjl4k8bv424p0xc0"; depends=[jsonlite RCurl sp]; }; + osmplotr = derive2 { name="osmplotr"; version="0.2.3"; sha256="1gvr3plni62hrs1i4b1id863ib0d4l4gfh8h40nyvk16mgvp4a4c"; depends=[curl ggm ggplot2 httr igraph osmar rgeos sp spatstat XML]; }; + osrm = derive2 { name="osrm"; version="3.0.0"; sha256="099k0cfkzzq5pdb17j9ian8x6s3i13f6lcyhy4ls0dnhdgk4d7l1"; depends=[bitops gepaf jsonlite raster RCurl rgeos sp]; }; + otrimle = derive2 { name="otrimle"; version="0.4"; sha256="0xhsx11rpm9179jm5p00x2c125r15bhslsnll182bhw282vwx2kx"; depends=[mclust prabclus]; }; ouch = derive2 { name="ouch"; version="2.9-2"; sha256="05c3bdxpjcgmimk0zl9744f0gmchhpm7myzjrx5fhpbp5h6jayaf"; depends=[subplex]; }; outbreaker = derive2 { name="outbreaker"; version="1.1-7"; sha256="0bq8an4hcs88279nkbn92x5s36i3sb64xqdlcrxy8fdk05w0cmg4"; depends=[adegenet ape igraph]; }; + outbreaks = derive2 { name="outbreaks"; version="1.2.0"; sha256="1snycxcllc5vq93ay7xyjw6g4130dvcmja56wvdxixvc5bbv4z1d"; depends=[]; }; outliers = derive2 { name="outliers"; version="0.14"; sha256="0vcqfqmmv4yblyp3s6bd25r49pxb7hjzipiic5a82924nqfqzkmn"; depends=[]; }; overlap = derive2 { name="overlap"; version="0.2.6"; sha256="066zf4i6anklqqmxf06lyfr9w4scw0djqgp8rabgpzwkvk9xgxmb"; depends=[]; }; - overlapping = derive2 { name="overlapping"; version="1.2"; sha256="0rcil0925lj166mpgc8xvy3fnp9y84mc902jqd2lyxkqrpc0zv1s"; depends=[lattice]; }; - oz = derive2 { name="oz"; version="1.0-20"; sha256="1d420606ldyw2rhl8dh5hpscvjx6vanbq0hrg81m7b6v0q5rkfri"; depends=[]; }; + overlapping = derive2 { name="overlapping"; version="1.4.0"; sha256="00rn55wvcj32qgjbjplaq32k2vxzrdlbp8dh7scyw78wyn8bdv2c"; depends=[ggplot2]; }; + owmr = derive2 { name="owmr"; version="0.7.2"; sha256="0206i5zzmfjdd43qziis6kqc0zsvn0l7v5sspjrywjxw2gyjfmwb"; depends=[httr jsonlite magrittr]; }; + oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; }; pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; }; pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; }; + pETM = derive2 { name="pETM"; version="0.1.5"; sha256="0a677jbaxhvcjz6846cd1y867srgrmxm78k06xva3hds7hbycm3w"; depends=[Matrix]; }; pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; }; + pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; + pMineR = derive2 { name="pMineR"; version="0.31"; sha256="1j71dcldzmk4kzspx4v5s3vqqkllgwkckfm1g145qgg26c1gyc6l"; depends=[cluster DiagrammeR stringr XML]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; - pROC = derive2 { name="pROC"; version="1.8"; sha256="0rva08hnaah9qv6hapzgfsdy2g06fdvnjmw0l733wm5j2g44ps8m"; depends=[plyr Rcpp]; }; - pRSR = derive2 { name="pRSR"; version="3.0.2"; sha256="1s81mi172mwxhp786c1fl579cg87valppr0z958ssvxsvg5hbfxy"; depends=[]; }; + pROC = derive2 { name="pROC"; version="1.9.1"; sha256="1fc5wq4skry52jjwldp4dyxwvss1g93ji5915zv9zz3c9nxd3hpq"; depends=[plyr Rcpp]; }; + pRSR = derive2 { name="pRSR"; version="3.1.1"; sha256="1irx95b7cwvx3gpn9brjjn4k947m8frz542r18nilc9f1159mb3s"; depends=[]; }; pSI = derive2 { name="pSI"; version="1.1"; sha256="0cvw38dqqlyx7cpl27hq33f5xns2d0019lyr98pwndcnbp09mx0b"; depends=[gdata]; }; pa = derive2 { name="pa"; version="1.2-1"; sha256="1pfgzxirkb0p8f6smjlrbp1qpsh0vsvqf306cvldaj9zx8cw0q9f"; depends=[ggplot2]; }; pacbpred = derive2 { name="pacbpred"; version="0.92.2"; sha256="13p405vh9rf1r5idxl5payc85vwlzcd87wm15163vc9gmil1ncsf"; depends=[]; }; pack = derive2 { name="pack"; version="0.1-1"; sha256="0x4p8clwp49s2y67y7in530xwhjngnqwagf9xnyb1jp0z3myd3r7"; depends=[]; }; packClassic = derive2 { name="packClassic"; version="0.5.2"; sha256="04a1sg9vx3r0sq54q9kj0kpahp6my246jy3bivgy09g5fjk0dmkj"; depends=[]; }; - packHV = derive2 { name="packHV"; version="1.8"; sha256="0dr2picjd7mm633vw29524f3n4jpyillpzi9cg7yc2cymxnrgvyg"; depends=[survival WriteXLS]; }; + packHV = derive2 { name="packHV"; version="2.1"; sha256="1phwcm1m9in0nkyk3hminbm60iw9jp7vyd7gn871g8shfdm8ixyw"; depends=[survival WriteXLS]; }; packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; + packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.1.1"; sha256="0xvw283gyjak3j66g8x5jy2jdrkcxwhfzck2wdq2q6a6nxbyb0i1"; depends=[Rcpp]; }; - packrat = derive2 { name="packrat"; version="0.4.7"; sha256="0160ani3zlvffc2ap0cjhw8d727vxs80k2xh59mj04swiy115g48"; depends=[]; }; - pacman = derive2 { name="pacman"; version="0.3.0"; sha256="10fjkr4zjcx7cyfmnpdnb96swxizhdqhvzgb5crymrafxqvg00c7"; depends=[devtools]; }; - paco = derive2 { name="paco"; version="0.2.3"; sha256="1qdaqy3m105wrafxjld6qhrvwcyrjb7ryrh782zpvy9m8yhy0p4j"; depends=[plyr vegan]; }; + packrat = derive2 { name="packrat"; version="0.4.8-1"; sha256="1wvjyvb7yy6hq188msqzf8qa00lhll865jp939byc6d4zpscm0x2"; depends=[]; }; + pacman = derive2 { name="pacman"; version="0.4.1"; sha256="0qh3nxgfn26q3mwv3zyc6qq4h00mjdjrn2pfbfmdbjqjg4q75ypz"; depends=[devtools]; }; + paco = derive2 { name="paco"; version="0.3.1"; sha256="18k4ls6y9jdknx3dn2494chjigzn8hrsh332ha8a01snfzhp66m0"; depends=[plyr vegan]; }; + pacotest = derive2 { name="pacotest"; version="0.2"; sha256="1z8jiz951jj13dmgl75yjdvahph0jhk0d6n2f8xgzaj4rwmli6i8"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; + pact = derive2 { name="pact"; version="0.5.0"; sha256="043hbydj5f6889xrfsrn8jrgid2nnbsz6d7jpn4hywwa97snw4ny"; depends=[glmnet survival]; }; + padr = derive2 { name="padr"; version="0.2.1"; sha256="18cv4pz8zkn2a4m85yz8k68clq1zfgb6y7f6skdsflhg05mxq2qs"; depends=[Rcpp]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; pagenum = derive2 { name="pagenum"; version="1.0"; sha256="0iqx6lgbzcz5girw8cl934jcah7l32zdrbs70cxx8gs2x5rbfwkz"; depends=[]; }; - pageviews = derive2 { name="pageviews"; version="0.2.0"; sha256="1pfv7nfj4s51dawq6z9vwhs92wdl7hjq6pi6rsv0qh6pp9adl7sk"; depends=[httr jsonlite]; }; + pageviews = derive2 { name="pageviews"; version="0.3.0"; sha256="031y67nqqvf3fa2273m7z2cldda0ijh63qwkh4gis3hz9hfril0v"; depends=[curl httr jsonlite]; }; + paintmap = derive2 { name="paintmap"; version="1.0"; sha256="1qw5725yjymxmfhffqjx4lbmzj437c7qwr8xrzmf52f0m28nl3vk"; depends=[]; }; pairedCI = derive2 { name="pairedCI"; version="0.5-4"; sha256="03wf526n3bbr2ai44zwrdhbfx99pxq1nbng9wsbndrdg2ji4dar2"; depends=[]; }; pairheatmap = derive2 { name="pairheatmap"; version="1.0.1"; sha256="1awmqr5n9gbqxadkblpxwcjl9hm73019bwwfwy1f006jpn050d6l"; depends=[]; }; pairsD3 = derive2 { name="pairsD3"; version="0.1.0"; sha256="0ql6pqijf24pfyid52hmf5fmh4w1ca3sm47z9vknqpnjbn47v8q2"; depends=[htmlwidgets shiny]; }; @@ -6007,114 +7498,135 @@ in with self; { palaeoSig = derive2 { name="palaeoSig"; version="1.1-3"; sha256="1zm8xr7fpnnh6l4421vjavi6bg44iars3mna4r5fw3spmbswyv7b"; depends=[MASS mgcv rioja TeachingDemos vegan]; }; paleoMAS = derive2 { name="paleoMAS"; version="2.0-1"; sha256="1hhb5wbj4m3ch8wnvd1zkl5bk6wa9nl6jl1dhm4z6yqkh29yn9z6"; depends=[lattice MASS vegan]; }; paleoTS = derive2 { name="paleoTS"; version="0.5-1"; sha256="18f5lkgzvndc8s7w7d7dfdlqf37adrmzabpwkavjw1zkpb1dga8c"; depends=[doParallel foreach iterators mnormt]; }; - paleobioDB = derive2 { name="paleobioDB"; version="0.3"; sha256="1vcfssi6w0m2wd2smyjxp1zf0y48y95386kkb8qdndqw99g089w8"; depends=[gtools maps plyr raster RCurl rjson scales]; }; - paleofire = derive2 { name="paleofire"; version="1.1.8"; sha256="1g3m1chdqbivq5s7p1n53cfzq1cm5v0wkj4f4s0dih6pcid44si7"; depends=[GCD ggplot2 lattice locfit plyr raster rgdal]; }; - paleotree = derive2 { name="paleotree"; version="2.6"; sha256="08861pvr86dbynx687vbxziq3v08ii6hx0g8h5zcskz87x32q2lc"; depends=[ape phangorn phytools]; }; - palettetown = derive2 { name="palettetown"; version="0.1.0"; sha256="0zpqbd9g50vyidd0chhk2xqlzx7mnzyilr4c84lci1xw3r3avxp0"; depends=[]; }; + paleobioDB = derive2 { name="paleobioDB"; version="0.5.0"; sha256="195w0jzg8bhlqbsd3shi161wqr9cff6q85ik0x8w4laazzxs0jhr"; depends=[gtools maps plyr raster RCurl rjson scales]; }; + paleofire = derive2 { name="paleofire"; version="1.1.9"; sha256="0x11g90g6hlxw5407mmb6z4w7iqmipb5f0n3czs834ji5jhxl1x8"; depends=[GCD ggplot2 lattice locfit plyr raster rgdal]; }; + paleomorph = derive2 { name="paleomorph"; version="0.1.3"; sha256="0s119va1j4sqmc08wrk1z1ywdvam0qcn6lgla93bavpw4q7y9zbm"; depends=[]; }; + paleotree = derive2 { name="paleotree"; version="2.7"; sha256="0h2rch89p8n1i1zdy3xj5966hsz47a49r5baqvn1s9c9pr024czk"; depends=[ape phangorn phytools]; }; + palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; - palr = derive2 { name="palr"; version="0.0-4"; sha256="0rcb01lpi8zapnml1spx4ixxwbq9qh42sisqzrg7gxrkcjrbqxgl"; depends=[]; }; - pamctdp = derive2 { name="pamctdp"; version="0.3.1"; sha256="1fnadgfd2ikis49j9zl2ijj8gim8lpbygwxjj6ri9jyrc1qmj9jb"; depends=[ade4 FactoClass xtable]; }; + palm = derive2 { name="palm"; version="1.0.0"; sha256="0cjg5qal2bakl9v1qgs598rcvaa7qpwpqwxbbazfwy3yhmfrdd8v"; depends=[gsl mvtnorm R6 Rcpp spatstat]; }; + palr = derive2 { name="palr"; version="0.0.6"; sha256="163c0kcsl0k3fp5q9afv3pb8246j2b3jzmd6g2vcgxb8nhs8wr2f"; depends=[]; }; + pals = derive2 { name="pals"; version="1.0"; sha256="06wfa6dbqir9353rx2yph4s8n8d14gf6bvl907c07z9i9ml719sj"; depends=[colorspace dichromat mapproj maps rgl]; }; + pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="0.9"; sha256="01dv70ca3zif2b2fkx4xjl24x9p9kc63wf0dj5agdjp5qgbkp1p5"; depends=[gmodels lattice lme4 lmerTest mvtnorm]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.55"; sha256="1hy3khb0gikdr3vpjz0s245m5zang1vq8k93g7n9fq3sjfa034gd"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.4"; sha256="1p3nigmhrnlch86g89hn7l0wvkifx3k9n59g0psi95yck43kza76"; depends=[]; }; pander = derive2 { name="pander"; version="0.6.0"; sha256="0jgylffc4ymvppaqsflxaj1l18c4x49jbz0b86jjsa00xqdyk4cn"; depends=[digest Rcpp]; }; + pandocfilters = derive2 { name="pandocfilters"; version="0.1-1"; sha256="18n155rkbr3gq5lsb0bh1v1v0z0r6xr2ald3nh7xh3v9qwxpmsz1"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; - panelaggregation = derive2 { name="panelaggregation"; version="0.1"; sha256="19426hab4rvgn8k2c7x327k4ymihas59jbys0nmrfgg074x0xdnm"; depends=[data_table]; }; - pangaear = derive2 { name="pangaear"; version="0.1.0"; sha256="0g5wgm1g3hbxwmlpra70zir9sl0zhd4xm6rj9bv98bszpzl3x6l6"; depends=[httr oai XML]; }; - papeR = derive2 { name="papeR"; version="1.0-0"; sha256="0c8zljbw0pzaqx7j76245wpmk2104n0cvvddm6rf7v6cfvw72jws"; depends=[car gmodels xtable]; }; + panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; + pangaear = derive2 { name="pangaear"; version="0.2.4"; sha256="0h504b4wnqahy3sq35yq48rafaikkidfqdx96hv8999ag7kyndl2"; depends=[httr jsonlite oai rappdirs tibble xml2]; }; + papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; + papeR = derive2 { name="papeR"; version="1.0-2"; sha256="1pp6zzdqg9lj61f8p90sxl30vp9knmis7154fmfpm6pynbgr46ms"; depends=[car gmodels xtable]; }; + paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="1.0"; sha256="05krkd643awqhfrylq9lxr2cmgvnm1msn2x8p1l1483n2gzyklz7"; depends=[mvtnorm]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; parallelMap = derive2 { name="parallelMap"; version="1.3"; sha256="026d018fr2a43cbh8bi2dklzr9fxjzdw5qyq84g2i18v5ibr6bd5"; depends=[BBmisc checkmate]; }; parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; }; - paramlink = derive2 { name="paramlink"; version="0.9-7"; sha256="02h7znac93v8ibra3ni2psxc9lpfhiiw4q8asfyrx400345ifk5b"; depends=[kinship2 maxLik]; }; - params = derive2 { name="params"; version="0.5.0"; sha256="0i2fb305gkjq8j2n3bfphv0zirv2qxl61rcpnci1qvg2cy44qnzn"; depends=[whisker]; }; + paramGUI = derive2 { name="paramGUI"; version="2.1.2"; sha256="054l9hqsvgnwipzqrapkhsk67afz93zv1cligqhjl2wggzn9a8sc"; depends=[colorspace fields shiny shinydashboard TIMP]; }; + paramlink = derive2 { name="paramlink"; version="0.9-9"; sha256="1d2s20ys2zbbpw38l24j57p070h5wf4rgf3gb9lxgx1ibpww1zf0"; depends=[assertthat kinship2 maxLik]; }; + params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; paran = derive2 { name="paran"; version="1.5.1"; sha256="0nvgk01z2vypk5bawkd6pp0pnbgb54ljy0p8sc47c8ibk242ljqk"; depends=[MASS]; }; parboost = derive2 { name="parboost"; version="0.1.4"; sha256="087b4as0w8bckwqpisq9mllvm523vlxmld3irrms13la23z6rjvf"; depends=[caret doParallel glmnet iterators mboost party plyr]; }; parcor = derive2 { name="parcor"; version="0.2-6"; sha256="10bhw50g8c4ln5gapa7wghhb050a3jmd1sw1d1k8yljibwcbbx36"; depends=[Epi GeneNet glmnet MASS ppls]; }; - parfm = derive2 { name="parfm"; version="2.5.10"; sha256="0mk5y7rvfn873lfbscrp8dqgdsracx59dnp6dzr5rha86k4bn097"; depends=[eha msm survival]; }; + parfm = derive2 { name="parfm"; version="2.7.1"; sha256="0a1fv89vzrziavsy23as6j6hyg4xn7swjrsgax8vpi2rbscy3g5x"; depends=[msm optimx sn survival]; }; parfossil = derive2 { name="parfossil"; version="0.2.0"; sha256="12gsc5n4ycvhzxvq5j0r3jnnrzw1q412dbvmakipyw2yx2l2s7jn"; depends=[foreach fossil]; }; - parma = derive2 { name="parma"; version="1.5-2"; sha256="1yvk0wfcc1mgz2bif6hvw5l7zclbv4pz1cki0ymslrmxapjqnsz8"; depends=[corpcor FRAPO nloptr quadprog Rglpk slam truncnorm]; }; + parma = derive2 { name="parma"; version="1.5-3"; sha256="0yjpmxz20v6k107qylw42yf1b231hzym9dizjcq1kalivvscczc5"; depends=[corpcor nloptr quadprog Rglpk slam truncnorm]; }; parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; }; - parsec = derive2 { name="parsec"; version="1.1"; sha256="02sj2n34n4c6db5s15hbprcx1appasyj8vh2c8my2mppfrk7cnc7"; depends=[]; }; + parsec = derive2 { name="parsec"; version="1.1.2"; sha256="1hf3c23rnxckw4s2vqzbhkjgiir1nv1811saximj0mbih9w2vqpf"; depends=[]; }; parsedate = derive2 { name="parsedate"; version="1.1.1"; sha256="0mr97rw4fzg2v9dh5d4x0b76d5s56gi6zilq69yjhbx78w46apzc"; depends=[]; }; - partDSA = derive2 { name="partDSA"; version="0.9.10"; sha256="1j6ihgyjiy8dnr89xkqvl1dkmdswvknffq7zc15civy0h781azv6"; depends=[survival]; }; + parsemsf = derive2 { name="parsemsf"; version="0.1.0"; sha256="0ijnnajcr7zyh0c1k6bz9qa4fkcly1fd44x3qj7mhlx58gnq4sa4"; depends=[dplyr lazyeval RSQLite stringr tidyr]; }; + partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partialAR = derive2 { name="partialAR"; version="1.0.5"; sha256="1d8nbv3rkf0p4vg8mlb1l5cqzgsqqhigwiq2bnd4npak6fq6syvg"; depends=[data_table FKF ggplot2 MASS plot3D Rcpp tseries urca zoo]; }; partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; }; partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; }; partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; }; partitions = derive2 { name="partitions"; version="1.9-18"; sha256="1brzvk2zbrh0s4vbaiib6zkpcyx7ghc6ws36h3diz5nxbx3g95ik"; depends=[gmp polynom]; }; - partools = derive2 { name="partools"; version="1.1.3"; sha256="07bvhs6a53cm0gvmxbibg8rhzvjxrhjgl65ib348a4q43pgap2v1"; depends=[]; }; + partools = derive2 { name="partools"; version="1.1.5"; sha256="062rnq35cbzyr6mdpq4w88bxd6c2pzbghxan6j11pipyzvv7qsj3"; depends=[data_table pdist]; }; partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; }; - party = derive2 { name="party"; version="1.0-25"; sha256="08arvh7bhc67ih1mm6faslw7jgh86f9n9qgswav0mjkg9icny86l"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; - partykit = derive2 { name="partykit"; version="1.0-5"; sha256="13x668b7vq49jrpdk0ja7lnrv335xx50g21d7jlv0g5s8laa392d"; depends=[survival]; }; + party = derive2 { name="party"; version="1.2-1"; sha256="1vi0hisph0xscj80ch8gcdp9vrh2k8z5msd2j9p5mvr0f5i5hr7d"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + partykit = derive2 { name="partykit"; version="1.1-1"; sha256="0cl3ir54pafjhk1cvyzx1a8a244x0qa5lky47m7fx1fdj0k7dx6r"; depends=[Formula survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; pass = derive2 { name="pass"; version="1.0"; sha256="00dzwg2lnzmrrmzq3fyrs4axswgnsn7f62l2f2a8d8gyf8qzz3nf"; depends=[lars MASS ncvreg]; }; password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; }; + pasta = derive2 { name="pasta"; version="0.1.0"; sha256="12ps5bhyk3hllfa9smyw8vxglr45xz9kvhkx2v65pb86iqm0r0kg"; depends=[]; }; pastecs = derive2 { name="pastecs"; version="1.3-18"; sha256="0ixlnc1psgqgm71bsf5z5j65lvr92ghpsk9f1ifm94dzjhi6d22i"; depends=[boot]; }; pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; patPRO = derive2 { name="patPRO"; version="1.1.0"; sha256="1l6q6glklmfgivs4gw0v8q4qa57wr2bna477sn2v401hcwmgnfyn"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; }; patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; }; - patchSynctex = derive2 { name="patchSynctex"; version="0.1-3"; sha256="0gbbdszrprshcpnpbnvqmx0wlij2d36fw94ssfbx11d7fmjpaj37"; depends=[stringr]; }; + patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; pathClass = derive2 { name="pathClass"; version="0.9.4"; sha256="1vzmz3bml37wfxsjhkw9fip90sr1iv521ccr7nlf6xd30wavqywk"; depends=[affy Biobase igraph kernlab lpSolve ROCR svmpath]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9"; sha256="1j2h9mmwfi95nwhk9214kcfpb1qrmw249mjaza7i9gijmlicraxz"; depends=[shape]; }; pathmox = derive2 { name="pathmox"; version="0.2.0"; sha256="0hcllnpjjays35yngz309f1gcx9qg5z9h302kg9mhxs90470x4w0"; depends=[plspm tester]; }; - pathological = derive2 { name="pathological"; version="0.0-7"; sha256="0ki8a7i03c4hq7af1zq7n7z1glq15jh03zr4l4m05dblyn0nfsm7"; depends=[assertive_base assertive_files assertive_properties assertive_reflection assertive_strings assertive_types plyr stringr]; }; + pathological = derive2 { name="pathological"; version="0.1-2"; sha256="07g7ps6zfxi98y98kwas95rr5ybfd4bpih5mhkjafc7bn99254n2"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_reflection assertive_strings assertive_types magrittr plyr stringi]; }; + patternplot = derive2 { name="patternplot"; version="0.1"; sha256="1k167vfwizwk6m0qpq9p0wq7y2g9ib6wi9j64wmvpqjw8k77l00r"; depends=[dplyr ggplot2 gtable jpeg png Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; - pavo = derive2 { name="pavo"; version="0.5-5"; sha256="02xxmblp9k2hrv1ya0sxddd710hhsz5s7kh9xbg7m47h9fkvqy22"; depends=[geometry mapproj rcdd rgl]; }; - pawacc = derive2 { name="pawacc"; version="1.2.1"; sha256="1l2wn69ynr5mza04a5mmzwzigqac8k9xkiaw7sdqv5hn9y7x3sj9"; depends=[SparseM]; }; - pbapply = derive2 { name="pbapply"; version="1.2-0"; sha256="1sr5nr5ljdah2cs2wcfgfd0bzd4y4nk9kgp1wym1v4s9wxcbjc6x"; depends=[]; }; + pavo = derive2 { name="pavo"; version="1.0.0"; sha256="0xi9sb36xc6h8j4h4b46imwy936wi8vlqsv4mfkjka34bn0q7afr"; depends=[geometry mapproj rcdd scatterplot3d]; }; + pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; + pbapply = derive2 { name="pbapply"; version="1.3-1"; sha256="053i92j0ch3msywapdia08mmk1w8bhcs6x7cl0han2r9sfliwkzw"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-9"; sha256="1p8rj0lzm4pp1svgy7xia2sclkngzfjbgbikq94s6v92d582wncw"; depends=[rootSolve survival]; }; - pbdBASE = derive2 { name="pbdBASE"; version="0.4-3"; sha256="1jj2bhb0l8cyai3scb73lqf6dl8vq8c16yfmdll11z2zhvpkwdd9"; depends=[pbdMPI pbdSLAP]; }; - pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-0"; sha256="1rrmixpr9zc6dmhif4lmpxfc1zpwy8hfwph31yn1pz5dipmaay88"; depends=[pbdBASE pbdDMAT pbdMPI]; }; - pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-0"; sha256="16039jvm8n4lx82jw5p1i5yylm5fcb9rh39law41wq845a318ihd"; depends=[pbdBASE pbdMPI]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.3-1"; sha256="0rk38v1iwkzd119xyb18vprc08yvdx1bs55vv1j519zscpppbqfq"; depends=[rlecuyer]; }; + pbdBASE = derive2 { name="pbdBASE"; version="0.4-5"; sha256="0i7rav197787snhw2l5pyb2x0i9d1gl9d7lks2bk0dcxr0ndy9gm"; depends=[pbdMPI pbdSLAP]; }; + pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; }; + pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-2"; sha256="1xiwfpi8r0l8jlfrc35aknm09y4qbn0hvvkscdpcxv9q7zifvl3v"; depends=[pbdBASE pbdMPI]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.3-3"; sha256="0bgnx2d7ykfzq85jkiggwakqz2ngmvf7d4lx8qp95w272bkpm779"; depends=[rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; - pbdPROF = derive2 { name="pbdPROF"; version="0.3-0"; sha256="0k3d70r01zlldqvz638fgizndfcaczjq79hr3ran3a6mm6jfn5z9"; depends=[]; }; - pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-1"; sha256="1yl7hk7h285nkgf4ayprjgm0gai848igvhgym5y0bqnnlir8kdqx"; depends=[pbdMPI rlecuyer]; }; - pbdZMQ = derive2 { name="pbdZMQ"; version="0.2-1"; sha256="1afav138zkc4m0qymyprh20fgkc225v5yb966058jphzvm21n6rb"; depends=[R6]; }; + pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; }; + pbdRPC = derive2 { name="pbdRPC"; version="0.1-1"; sha256="0ddn6ba9nvrh90jii2z9jx4graqaa985ja2q4h3q5q2d6dpm7j7r"; depends=[]; }; + pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-2"; sha256="0d7hj1rq4vmp9i4v7d3pjivqpw0pv06xjl4wlnjj42jfxdg70yvh"; depends=[pbdMPI rlecuyer]; }; + pbdZMQ = derive2 { name="pbdZMQ"; version="0.2-5"; sha256="12qgnzhc0lkzmkg143y0wlvpsa0qqw1rmv7x8c67ixd4pbwzcym7"; depends=[R6]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; + pbkrtest = derive2 { name="pbkrtest"; version="0.4-6"; sha256="00cw18q7wvddzjrbxz917wkix6r7672vi2wmsp4gwgzady8vha4x"; depends=[lme4 MASS Matrix]; }; + pbmcapply = derive2 { name="pbmcapply"; version="1.2.1"; sha256="1dlpiphvl8rl08r7lml2mky137kahqij102wyjif1yk3xwdds8ca"; depends=[future]; }; pbo = derive2 { name="pbo"; version="1.3.4"; sha256="0v522z36q48k4mx5gym564kgvhmf08fsadp8qs6amzbgkdx40yc4"; depends=[lattice]; }; pbs = derive2 { name="pbs"; version="1.1"; sha256="0cpgs6k5h8y2cia01zs1p4ri8r7ljg2z4x8xcbx73s680dvnxa2w"; depends=[]; }; - pcIRT = derive2 { name="pcIRT"; version="0.2"; sha256="18rqyhkzjaqjvsyh3vr3dv9jwqvsa28d0vhnnzj72na6h6rx31w4"; depends=[combinat Rcpp]; }; - pca3d = derive2 { name="pca3d"; version="0.8"; sha256="03ghncfpma1fwby8kxm0v90l795mknz8s4y81l24f3n7mmhighn6"; depends=[ellipse rgl]; }; + pcIRT = derive2 { name="pcIRT"; version="0.2.2"; sha256="0sf6kkcsblc758sb1gkl4ryr72w0xhkd9nr4xdns8c9dfg9qcw1h"; depends=[combinat Rcpp]; }; + pca3d = derive2 { name="pca3d"; version="0.10"; sha256="1bpm4sbj7h2fd0h5ybjhq8g61l8v2fbc92yiiascdgfili85zsf3"; depends=[ellipse rgl]; }; pcaBootPlot = derive2 { name="pcaBootPlot"; version="0.2.0"; sha256="1320d969znk9xvm1ylhc3a31nynhzyjpbg1fsryq72nhf8jxijaa"; depends=[FactoMineR RColorBrewer]; }; - pcaL1 = derive2 { name="pcaL1"; version="1.3"; sha256="026cgi812kvbkmaryd3lyqnb1m78i3ql2phlvsd2r691y1j8w532"; depends=[]; }; - pcaPP = derive2 { name="pcaPP"; version="1.9-60"; sha256="1rqq4zgik7cgnnnm8il1rxamp6q9isznac8fhryfsfdcawclfjws"; depends=[mvtnorm]; }; - pcadapt = derive2 { name="pcadapt"; version="2.2"; sha256="0nlm1wmkcrdacfaixhna42z9vdcb3j1nczkd2qcsx6kklkrjhvik"; depends=[MASS robust]; }; - pcalg = derive2 { name="pcalg"; version="2.2-4"; sha256="0qx0impxh6pzbgdhpkbl13qfql4zpsa3xiy4hc640d15zxprv6zw"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm gmp graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcaL1 = derive2 { name="pcaL1"; version="1.4.1"; sha256="07qsi3k6l9ga1ixqmz8sw1hmjqg0l3rv1czwwgb6izsmjkcxfyzd"; depends=[]; }; + pcaPA = derive2 { name="pcaPA"; version="2.0.2"; sha256="14hi09qksr1z54l268yv4g2x5hlikir7zir4ccd9yi5z1918ksj5"; depends=[ggplot2 ltm mc2d polycor sfsmisc]; }; + pcaPP = derive2 { name="pcaPP"; version="1.9-61"; sha256="0afwi17grkac5yckipfsyqq1r1qgljzb3w5abc9mc6pzb7hrbhvx"; depends=[mvtnorm]; }; + pcadapt = derive2 { name="pcadapt"; version="3.0.4"; sha256="031ql3xppjkqrm17bvccj61hyf38skjb4qv6rs0l1h2ib8jql8ka"; depends=[ggplot2 MASS robust vcfR]; }; + pcalg = derive2 { name="pcalg"; version="2.4-5"; sha256="1gfwx26r76d5arqhs03wldaycx1yj55bdwlaam4w42g7hi5bzdbm"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm gmp graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcdpca = derive2 { name="pcdpca"; version="0.2.1"; sha256="0vl661pjlfcgqmnw3c1032aci4akld1pqxchb2fh8y5wap1nhypa"; depends=[fda freqdom]; }; pcev = derive2 { name="pcev"; version="1.1.1"; sha256="0vhn5514dnmhv98bchvsfd6pfjmvbc7hhb9zabgf8syk9rh8y9h8"; depends=[RMTstat]; }; pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; - pch = derive2 { name="pch"; version="1.1"; sha256="1vwdp4j66p2vj47psdazbaq7g0n4ldl0295z0v0k5d9q8j719ww2"; depends=[survival]; }; - pcnetmeta = derive2 { name="pcnetmeta"; version="2.3"; sha256="1qcz18cac59i1c6limwknzwsl7svplls9i45jvvfqz91p8q68cgl"; depends=[coda rjags]; }; + pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; }; + pcnetmeta = derive2 { name="pcnetmeta"; version="2.4"; sha256="1d7cjf15blh0ysc064n8yil77yj799bsff0rdjvimaa2hbxpnk98"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; + pcrcoal = derive2 { name="pcrcoal"; version="1.2.0"; sha256="0rd610ny8p7by3gi6kk130ii0qcswqsng5mzmxz8hrxqk0cs4c9x"; depends=[ape ggplot2 phylosim]; }; + pcrsim = derive2 { name="pcrsim"; version="1.0.1"; sha256="004xrxnfkq1a8y27p7v4xz7jf3y3h5fkxiy2vyqdqv2yqhqdbzpg"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; }; pcse = derive2 { name="pcse"; version="1.9"; sha256="04vprsvcmv1ivxqrrvd1f8ifg493byncqvmr84fmc0jw5m9jrk3j"; depends=[]; }; - pdR = derive2 { name="pdR"; version="1.3"; sha256="0y81nlvq5vwf6021m5ns6j4l44c5456jkbs2x9y7jfkw6r3v2ddf"; depends=[]; }; + pdR = derive2 { name="pdR"; version="1.5"; sha256="072ra8czfvgcgkbdfkjhbpk7f23zh717f9sh84vls9j0wyrai6hn"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; + pdSpecEst = derive2 { name="pdSpecEst"; version="1.0.0"; sha256="0jd7540v7zdg4l5i6i7pdwc7bgnpkhdfpf5b9bjx2gka592swhq4"; depends=[astsa Rcpp RcppArmadillo]; }; pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; }; pdfCluster = derive2 { name="pdfCluster"; version="1.0-2"; sha256="0kbci54dlzn736835fh18xnf2pmzqrdmwa3jim29xcnwa1r2gklb"; depends=[geometry]; }; - pdfetch = derive2 { name="pdfetch"; version="0.1.7"; sha256="12ddf3kyw9pppjn6haq7a3k27vl17016s4h2mc31mbb9fn6h4cjz"; depends=[httr jsonlite lubridate reshape2 XML xts zoo]; }; + pdfetch = derive2 { name="pdfetch"; version="0.1.8"; sha256="0yg5s7nxfbsffi3v1layi7w7y3bcyb1lkyinr0ygnjz5cmqf3df0"; depends=[httr jsonlite lubridate readr reshape2 stringr XML xml2 xts zoo]; }; + pdfsearch = derive2 { name="pdfsearch"; version="0.1.1"; sha256="0k62j6ilv8rmmmasqyb3hklhjqg22jiyx0sxd7f8n0xmlfcjgfqi"; depends=[pdftools tibble]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; - pdftools = derive2 { name="pdftools"; version="0.2"; sha256="0ys3g18gx8ibwj4srcjp37s7fb5ls392knm36jqbbgrl638jglkd"; depends=[Rcpp]; }; + pdftools = derive2 { name="pdftools"; version="1.0"; sha256="1ziflvvzwk3g21s67b09qx023i2chvx09b0675nskvbxssnsc5r5"; depends=[Rcpp]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0"; sha256="1czpaghp2lcad4j6wxswdfw0n9m0phngy966zr4fr3ciqpx3q129"; depends=[mco]; }; pdolsms = derive2 { name="pdolsms"; version="0.2"; sha256="18gwr1xnm7jbqna911b7haa9sv1i2qvq18w00dkbnj796rh0h78f"; depends=[reshape2]; }; - peacots = derive2 { name="peacots"; version="1.2"; sha256="1qrg6rzdnj0ba6igj4k9m1kc2q7gbwg8kwnmzhkjfza8jl8fqkf2"; depends=[]; }; + pdp = derive2 { name="pdp"; version="0.4.0"; sha256="19kijpz0davv8359a0x623zjbq1jn5agp6wfx36yi87l2dlh254y"; depends=[gridExtra lattice magrittr mgcv plyr viridis]; }; + peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; peakPick = derive2 { name="peakPick"; version="0.11"; sha256="1zf7ff9arm4hkdxrfhb0p8p7npd51icy773g2raaqsfys825xwhm"; depends=[matrixStats]; }; + peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pear = derive2 { name="pear"; version="1.2"; sha256="1ixmyzm72s18qrfv2m8xzh5503k1q90lhddq4sp46m0q7qyxb192"; depends=[]; }; - pearson7 = derive2 { name="pearson7"; version="1.0-1"; sha256="0li32my02gv5yaf4q1w48pjbmij2njkpd15135n9mzjc5ibvf5kh"; depends=[]; }; - pec = derive2 { name="pec"; version="2.4.7"; sha256="1ra8gp46f99z291cbdaln0b5k9w124vi45ncwcvaf5lgxv7c8c74"; depends=[foreach prodlim rms survival]; }; + pearson7 = derive2 { name="pearson7"; version="1.0-2"; sha256="0x8bnlzgmfah8lzdg8skxs7bm8yq0nkrhqi7q43h902j4jl5b8jy"; depends=[]; }; + pec = derive2 { name="pec"; version="2.4.9"; sha256="0r8fg4kic366606pdysyws4an3152fc8mykr7vwixhn63yjk0vpd"; depends=[foreach prodlim rms survival timereg]; }; pedantics = derive2 { name="pedantics"; version="1.5"; sha256="0m5jxzkf1pf657q2klv6idnywg18ki962666nj7sfyl4rq06xhsi"; depends=[kinship2 MasterBayes MCMCglmm]; }; pedgene = derive2 { name="pedgene"; version="2.9"; sha256="1200d6blz7n3krnvhw0i9mz6219vwk0vlj17yzr3fqzyn5cyf91z"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; pedometrics = derive2 { name="pedometrics"; version="0.6-6"; sha256="1w9wa73wva6z0d56g221l8qmc5igfypwsa2xq4sn4r501bdy8qpq"; depends=[lattice latticeExtra Rcpp]; }; - pegas = derive2 { name="pegas"; version="0.8-2"; sha256="1sci4m7vvxi8p8lwqkqng04pajrby0c4l91sav3ahvfgj6xldp9q"; depends=[adegenet ape]; }; + pegas = derive2 { name="pegas"; version="0.9"; sha256="0vll6b4ha5l1mf3vpxrwz99m1fzgxwh6xn3z4jg9ggd9sh8jd2wd"; depends=[adegenet ape]; }; pems_utils = derive2 { name="pems.utils"; version="0.2.17.8"; sha256="1qxsjzxb8gdw1hyxgd923s609k98pjdaxs6wm3pg4bl1w8sxqi8d"; depends=[ggplot2 lattice latticeExtra loa plyr RColorBrewer]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; - penalized = derive2 { name="penalized"; version="0.9-45"; sha256="0svmhsh0lv3d571jyhk73zd9slcd6xnp3p0l1ijab9gl2rjhlzz5"; depends=[survival]; }; + penalized = derive2 { name="penalized"; version="0.9-50"; sha256="0q60pgmx2wbnc7i1zf1i0sxn1zy257hl73ii0abx83zpcywq9vb6"; depends=[Rcpp RcppArmadillo survival]; }; penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; penalizedSVM = derive2 { name="penalizedSVM"; version="1.1"; sha256="0zc36cgcrdy4rwhg4hhhahymqfalvc5v2zmqq56ikz5blln82qvq"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; pencopula = derive2 { name="pencopula"; version="0.3.5"; sha256="1cy36pprbrfabk9n3x4d1xbj1vd2dda7xq3ihj2hzniwn77j63wi"; depends=[fda lattice latticeExtra quadprog]; }; @@ -6125,28 +7637,39 @@ in with self; { peptider = derive2 { name="peptider"; version="0.2.2"; sha256="109z81x6jcsx2651lclff7ak55zb1i89pyi58rxri40aamx4b1x2"; depends=[discreteRV dplyr plyr]; }; pequod = derive2 { name="pequod"; version="0.0-5"; sha256="0mwrgyrxgiifpnpy15qxpdrdmd7dxqihccrnj5nh8fq9fvwymamg"; depends=[car ggplot2]; }; perARMA = derive2 { name="perARMA"; version="1.6"; sha256="0k70lcqhiiffrwzvh51asnhx68qxpnjnxadarvgpgbc7kfy7lv9x"; depends=[corpcor gnm matlab Matrix signal]; }; - performanceEstimation = derive2 { name="performanceEstimation"; version="1.0.2"; sha256="027bcr4ipjwmm1hni2mg7n4hz4mgs1dh2npqmfp8b5kqmccyxpx6"; depends=[doParallel foreach ggplot2]; }; + perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; + performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; + pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; perm = derive2 { name="perm"; version="1.0-0.0"; sha256="0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"; depends=[]; }; permGPU = derive2 { name="permGPU"; version="0.14.9"; sha256="10r2qxbvzjxv3520lrn6cwi5akhhwgkhz7yaqxi5vh2f5l0s49wy"; depends=[Biobase foreach RUnit survival]; }; + permGS = derive2 { name="permGS"; version="0.2.3"; sha256="0738jg5k370hjgychv7b93rhwb66xz10hlspbglcgb5w3p1r1rpl"; depends=[coin survival]; }; + permPATH = derive2 { name="permPATH"; version="1.0"; sha256="0893aanh39dw2hqwwhm9c3d30faidg6sa4srsr2f2gs1jin3nqkq"; depends=[R2HTML xtable]; }; permubiome = derive2 { name="permubiome"; version="1.1"; sha256="02fg1g96pg6a87n8mhrls54xp0vnqqsgg39nnjirxr7hd74l71x9"; depends=[ggplot2]; }; - permutations = derive2 { name="permutations"; version="1.0-0"; sha256="0k6y57ya9bk57l6wq4zz8rnsj02vcfhkl5giw30dxdnv4lxqf73s"; depends=[magic numbers partitions]; }; - permute = derive2 { name="permute"; version="0.9-0"; sha256="0w68cqw6s4pixix8bh1qzsy1pm64jqh1cjznw74h82ygp8sj7p73"; depends=[]; }; + permutations = derive2 { name="permutations"; version="1.0-2"; sha256="04lak21x0z1cskgm5w4xdyq59kmyrz64bwfpf332vfka54aiv8lk"; depends=[magic numbers partitions]; }; + permute = derive2 { name="permute"; version="0.9-4"; sha256="1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5"; depends=[]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.05"; sha256="18ydmmp8aq4rf9834dmsr4fr9r07zyn97v8a1jqz3g9njza983la"; depends=[]; }; pesticides = derive2 { name="pesticides"; version="0.1"; sha256="1w180hqqav0mh9sr9djj94sf55fzh4r373a7h08a2nz9nyjpq09w"; depends=[]; }; + petrinetR = derive2 { name="petrinetR"; version="0.1.0"; sha256="0na8srzwi933bva9j3hrn4ji8s58dm28jpxw9q13mpahzch4r454"; depends=[dplyr visNetwork]; }; + pewdata = derive2 { name="pewdata"; version="0.2.0"; sha256="17j8fdn9x6hannr91zyccya523z3zm03gr517xfcyrd0m486xnqb"; depends=[httr magrittr purrr rvest]; }; pez = derive2 { name="pez"; version="1.1-1"; sha256="14n9s604wwh07kjir5kw6sra6bbmnpg00h3zvli3zqd8lx892hm8"; depends=[ade4 ape apTreeshape caper FD Matrix mvtnorm picante quantreg vegan]; }; + pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; pgam = derive2 { name="pgam"; version="0.4.12"; sha256="0vhac2mysd053bswy3xwpiz0q0qh260hziw6bygpf83vkj94qf2v"; depends=[]; }; - pgirmess = derive2 { name="pgirmess"; version="1.6.4"; sha256="1180dbxy392g06j9n2r0dlbr8rrhf0w1n273pawl8mblmf29vwz2"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; + pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; + pgirmess = derive2 { name="pgirmess"; version="1.6.5"; sha256="0z3yxdcgngsyy9ylga76gh0m92vfdfzg4asgx6a3g0hnixh0pri3"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; pglm = derive2 { name="pglm"; version="0.1-2"; sha256="1arn2gf0bkg0s59a96hyhrm7adw66d33qs2al2s0ghln6fyk8674"; depends=[maxLik plm statmod]; }; pgmm = derive2 { name="pgmm"; version="1.2"; sha256="0f0wdcirjyxzg2139c055i035qzmhm01yvf97nrhp69h4hpynb2n"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; + pgraph = derive2 { name="pgraph"; version="0.8"; sha256="1r784snci5m81qljfh1r3w8qzszmy0476zvsd1alh43afzg9zpr5"; depends=[energy glasso glmnet SAM]; }; pgs = derive2 { name="pgs"; version="0.4-0"; sha256="1zf5sjn662sds3h06zk5p4g71qnpwp5yhw1dkjzs1rs48pxmagrx"; depends=[gsl R2Cuba]; }; ph2bayes = derive2 { name="ph2bayes"; version="0.0.1"; sha256="09ns3i5dgbn8573g4sism6d3y8jp26icy21l8d8px91jfhlx7kxv"; depends=[Rcpp]; }; + ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; }; + ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; phalen = derive2 { name="phalen"; version="1.0"; sha256="0awj9a48dy0azkhqkkzf82q75hrsb2yw6dgbsvlsb0a71g4wyhlr"; depends=[sqldf]; }; - phangorn = derive2 { name="phangorn"; version="2.0.2"; sha256="1ywyd5ljkm7b8qfis2d7nzz4q04b0pfkscwf6vmbb31cziks2d1j"; depends=[ape igraph Matrix nnls quadprog]; }; + phangorn = derive2 { name="phangorn"; version="2.1.1"; sha256="1klc2s6crwmg30psgf1xkchyjqbksl7cdlnk3b0ypdw7pd3js5im"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; phaseR = derive2 { name="phaseR"; version="1.3"; sha256="1hwclb7lys00vc260y3z9428b5dgm7zq474i8yg0w07rxqriaq2h"; depends=[deSolve]; }; phcfM = derive2 { name="phcfM"; version="1.2"; sha256="0i1vr8rmq5zs34syz2vvy8c9603ifzr9s5v2izh1fh8xhzg7655x"; depends=[coda]; }; pheatmap = derive2 { name="pheatmap"; version="1.0.8"; sha256="1ik0k69kb4n7xl3bkx4p09kw08ri93855zcsxq1c668171jqfiji"; depends=[gtable RColorBrewer scales]; }; @@ -6155,115 +7678,154 @@ in with self; { phenmod = derive2 { name="phenmod"; version="1.2-3"; sha256="0dxwx8c7zka29fq7svrvn8bghj8jh8grbrgsw4pvavx2439cldak"; depends=[gstat lattice pheno RColorBrewer]; }; pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; }; pheno2geno = derive2 { name="pheno2geno"; version="1.3.1"; sha256="1k1hw5qxrwxy502zkcfcz0nxjqmvdk1fgghjc512vq7x5znblz3v"; depends=[mixtools qtl VGAM]; }; - phenology = derive2 { name="phenology"; version="4.2.4"; sha256="1074sr1p3bjz4f2zsswp5m60qs7axp9ngsk1l76gi2zpv95xay6s"; depends=[coda fields HelpersMG shiny zoo]; }; + phenology = derive2 { name="phenology"; version="5.3"; sha256="1lw4blnv06w0czliqwpz34nz7nanfihcv04l72sxma7jjmjpn4w8"; depends=[coda fields HelpersMG zoo]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; phmm = derive2 { name="phmm"; version="0.7-5"; sha256="0dil0ha199yh85j1skwfdl0v02vxdmb0xcc1jdbayjr5jrn9m1zk"; depends=[lattice Matrix survival]; }; - phonR = derive2 { name="phonR"; version="1.0-3"; sha256="09wzsq92jkxy6cd89czshpj1hsp56v9jbgqr5a06rm6bv3spa31i"; depends=[deldir plotrix splancs]; }; + phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; }; - phonics = derive2 { name="phonics"; version="0.6.3"; sha256="12ysjbpap9nkgg1kybgxq3f4qc54qpiqzf1dj4izmkgagqxms5xy"; depends=[BH Rcpp]; }; - photobiology = derive2 { name="photobiology"; version="0.9.5"; sha256="1fdpn9r1mg0l6ckw73ihh6gl8z6vswxqidb6fk76kvb5c1saldlq"; depends=[caTools dplyr lubridate plyr splus2R]; }; - photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.0"; sha256="038rsszxvja5kcm87w5vpk1hwcl6r68lyv15w1w449xcphb3c4ky"; depends=[photobiology]; }; - phreeqc = derive2 { name="phreeqc"; version="3.3.1"; sha256="0jzzzmijlmrwmpv9xfj9lq9kppxgk6hmfbp90wj2bpnhyyhkchqi"; depends=[]; }; + phonics = derive2 { name="phonics"; version="0.7.4"; sha256="0s5v9w3dcscjc7snv4nlhd4zm2dhxwv9jp6xaxp5wpwys5mim1ms"; depends=[BH Rcpp]; }; + photobiology = derive2 { name="photobiology"; version="0.9.13"; sha256="14pziwhg87gbzc3yjhb5kvbcfd8v6mqa4r8l83nnxp2gkr0kl66s"; depends=[caTools dplyr lubridate plyr polynom splus2R tibble]; }; + photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.12"; sha256="02pfajd9wzbrlxsk29d5sdp2bnzjdw1g08rrl5742c6ha4dll81m"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl reshape2 tibble]; }; + photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.2"; sha256="0m8bwpvr3g0xdcpjg0pm5qp7b941y85gdzw24vc1nhfmzwd0lxn0"; depends=[photobiology]; }; + photobiologyLamps = derive2 { name="photobiologyLamps"; version="0.4.1"; sha256="19pzb12qisv5hy7rps0dp9bq8zanpyr2yn41i6rd8hk80fknjha6"; depends=[photobiology]; }; + photobiologyPlants = derive2 { name="photobiologyPlants"; version="0.4.0"; sha256="1qdd2zbkdw601p5zcamd2ly0qp0hmnd32bdlnvpv96v90iwxpj9q"; depends=[photobiology photobiologyWavebands]; }; + photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.1"; sha256="07a2hw59k1a2knccijy82pb0f72y00s2wlc70b6snrgii45qgc23"; depends=[photobiology]; }; + phrasemachine = derive2 { name="phrasemachine"; version="1.0.0"; sha256="0jdz8imcry78shhbayhw7vpcx3kj8sfin3jl4fz5bb1ncdpcrpbj"; depends=[NLP openNLP quanteda stringr]; }; + phreeqc = derive2 { name="phreeqc"; version="3.3.10"; sha256="0hcdjj1wgfknqf5yx50b9vz5f72siw4dslyvk2xbrfnwbzzz4qib"; depends=[]; }; phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; - phyclust = derive2 { name="phyclust"; version="0.1-16"; sha256="19i5cpiss2k94zg03m00j9yc7zr0xsx3c8v8b7hkgv0kf9p40vjn"; depends=[ape]; }; + phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; + phybreak = derive2 { name="phybreak"; version="0.1.1"; sha256="14dn5q4knqb1ijbspnvyggdjrplbhxmyqj5jix8a74bk01xwl9nj"; depends=[ape phangorn Rcpp]; }; + phyclust = derive2 { name="phyclust"; version="0.1-18"; sha256="1avw6vx3fmzvk8iwc47jz014hxjn0mm8b941a9y1xyip11x0b6dd"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; phylin = derive2 { name="phylin"; version="1.1.1"; sha256="1hxmh5jgcz41bhmi8kvimw0b6m4p3yq85bh79hl7xbx2kshxmvzq"; depends=[]; }; + phyloTop = derive2 { name="phyloTop"; version="2.0.0"; sha256="14bsmq62afkzcnacjd8464krk5hnh1s54r6znlknnpyphy0g8xzk"; depends=[ape igraph NHPoisson phylobase]; }; phylobase = derive2 { name="phylobase"; version="0.8.2"; sha256="0wspm8fv2lps2z6zhz3qrf3icad1mgpq4379gmbi3i614h25r5gp"; depends=[ade4 ape Rcpp rncl RNeXML]; }; + phylocanvas = derive2 { name="phylocanvas"; version="0.1.0"; sha256="0h5cp37f2jzi30zpzyvd6h16592knkyp2jnvcdhhi37yhamzhgr6"; depends=[ape htmlwidgets magrittr phylobase]; }; phyloclim = derive2 { name="phyloclim"; version="0.9-4"; sha256="0ngg8x192lrhd75rr6qbh72pqijbrhrpizl27q0vr6hp7n9ch3zx"; depends=[ape raster]; }; - phylocurve = derive2 { name="phylocurve"; version="2.0.2"; sha256="0wbsl3mcrjjbq0aihnam2raxmk1895x5wy4x0jnzic4mpxfjwnnd"; depends=[ape doParallel doSNOW drc dtw foreach geiger geomorph GPfit Matrix mvnmle phylolm phytools Rcpp RcppArmadillo rgl]; }; + phylocurve = derive2 { name="phylocurve"; version="2.0.7"; sha256="0nffrhydz6jykph75nqciphsz3y8a5fq2hr1plbcl0lbfc60yjzx"; depends=[ape doParallel drc dtw foreach geiger geomorph GPfit Matrix mvnmle phylolm phytools Rcpp RcppArmadillo rgl]; }; phyloland = derive2 { name="phyloland"; version="1.3"; sha256="10g40m6n2s4qvnzlqcwpy3k0j7bxdp79f586jj910b8p00ymrksp"; depends=[ape]; }; - phylolm = derive2 { name="phylolm"; version="2.4"; sha256="0smgdfqb0kg3ka6g5azshlw1ig1djk9j01pc7hqzf6rymy9wkxxg"; depends=[ape]; }; + phylolm = derive2 { name="phylolm"; version="2.5"; sha256="0bffqzba6kcv8jyya7pja10mjnklhihczljhmj8q0pdrmd6qgqp8"; depends=[ape]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; + phylopath = derive2 { name="phylopath"; version="0.2.2"; sha256="16r3m1bsfsfjvzl9k8ss197m1hvghlm62fwdrrm9zk6jc4fjc0cf"; depends=[ape DiagrammeR dplyr ggm ggplot2 igraph MuMIn nlme pbapply purrr tibble tidyr]; }; phylosignal = derive2 { name="phylosignal"; version="1.1"; sha256="039sdb5cyijsrvj13xznr0j7vcp780lif62xk5x5hpzxvpg1wwgk"; depends=[adephylo ape boot igraph phylobase Rcpp RcppArmadillo RCurl]; }; + phylosim = derive2 { name="phylosim"; version="3.0.2"; sha256="148zm43cgdhr264ffcabjx4abykks07jix6lypqysqy25fbmdngk"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; + phylotate = derive2 { name="phylotate"; version="1.0"; sha256="0mpqxydz4xh7vf54szi11ckqzfmhaiwz9h8v3y1kslvarn8bvpr4"; depends=[]; }; phylotools = derive2 { name="phylotools"; version="0.1.2"; sha256="19w7xzk6sk1g9br7vwv338nvszzh0lk5rdzf0khiywka31bbsjyb"; depends=[ape fields picante seqRFLP spaa]; }; phyndr = derive2 { name="phyndr"; version="0.1.0"; sha256="03y3j4ik6flrksqm2dwh2cihn12hzfdik0fsak4zbxjdzaqn5gim"; depends=[ape]; }; phyreg = derive2 { name="phyreg"; version="0.7"; sha256="0saynhq4yvd4x2xaljcsfmqk7da2jq3jqk26fm9qivg900z4kf35"; depends=[]; }; physiology = derive2 { name="physiology"; version="0.2.2"; sha256="0z394smbnmlrnp9ms5vjczc3avrcn5nxm8np5y58k86x470w6npz"; depends=[]; }; - phytools = derive2 { name="phytools"; version="0.5-20"; sha256="1k43pf04mb1lsj5vhbj1rx4jadanrdsxfbl2j57wvxswk6fxihpz"; depends=[animation ape clusterGeneration maps mnormt msm numDeriv phangorn plotrix scatterplot3d]; }; + phytools = derive2 { name="phytools"; version="0.5-64"; sha256="0vamljghwxrdgncwzg0217cw65f0gzn0bx72xxlmdw69wshhrj3m"; depends=[animation ape clusterGeneration coda combinat maps mnormt msm numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; pi0 = derive2 { name="pi0"; version="1.4-0"; sha256="0qwyfan21k23q4dilnl7hqjghzm8n2qfw21wbvnidr6n9hf2fjjs"; depends=[Iso kernlab limSolve LowRankQP Matrix numDeriv quadprog qvalue rgl scatterplot3d]; }; picante = derive2 { name="picante"; version="1.6-2"; sha256="1zxpd8kh3ay6f3gdqkij1a6vnkr98dc1jib2r6br2kjyzshabcsd"; depends=[ape nlme vegan]; }; - picasso = derive2 { name="picasso"; version="0.5.0"; sha256="1m9fjpg6nx0c8fnh0m5g29gfrnprhzgzx5162r9sjf8i1xspawn4"; depends=[igraph lattice MASS Matrix]; }; + picasso = derive2 { name="picasso"; version="0.5.4"; sha256="0y6d0wmgv4nhyxyp0nz2hmfwvm4laagr1jzvngw3h4na1sw10l6i"; depends=[igraph lattice MASS Matrix]; }; pid = derive2 { name="pid"; version="0.36"; sha256="1w6h09ddq8rv7k5xl4v6nhlkm0vnmim57mg0dzk2dv9dc4v8i141"; depends=[DoE_base FrF2 ggplot2 png]; }; - piecewiseSEM = derive2 { name="piecewiseSEM"; version="1.1"; sha256="09x0nb6qbpikaxn2n7dq71dk25miv6rq96kpm24927l72dgx82gj"; depends=[ggm lavaan lme4 nlme]; }; - pinfsc50 = derive2 { name="pinfsc50"; version="1.0.0"; sha256="15zliybiw6mwyvcyi3n55jn996h2yl6j2m02yfns72g8p6sg89gk"; depends=[]; }; + piecewiseSEM = derive2 { name="piecewiseSEM"; version="1.2.1"; sha256="0c705ngyj2pf24vvqdld5rnf875pw64gs64l9f7nylbfrax39kbv"; depends=[lavaan lme4 nlme pbkrtest]; }; + pim = derive2 { name="pim"; version="2.0.0.2"; sha256="1fjnll2lfgdfak9427rh343y80awjzwpy46v33kpd6niz41zmra8"; depends=[BB nleqslv]; }; + pinbasic = derive2 { name="pinbasic"; version="1.0.1"; sha256="16sja6f8ivixrqj83xjgfxrvql6rzhkr0kd9li9spzhs20r4yshl"; depends=[doParallel fastcluster foreach ggplot2 iterators lubridate reshape2 scales]; }; + pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; pingr = derive2 { name="pingr"; version="1.1.0"; sha256="0j03qcsyckv3zh2v4m8wz8kyfl0k8qi71rm20rc0spy1s9ng7fcb"; depends=[]; }; - pinnacle_API = derive2 { name="pinnacle.API"; version="1.90"; sha256="10fpb7zsl22y61dsgxh2yphf5yn5b2dv42xd441q53xbpxsdhw7f"; depends=[dplyr httr jsonlite RCurl rjson uuid XML]; }; - pipe_design = derive2 { name="pipe.design"; version="0.3"; sha256="1idgy7s6fnydcda51yj1rjil2pd1r2y6g0m5dmn8sw7wmaq2n3h6"; depends=[ggplot2 gtools]; }; - pipeR = derive2 { name="pipeR"; version="0.6.0.6"; sha256="1d7vmccvh5ir26cv26mk0ay69rqmwmp0mgwjal9avfn9vrxq1fq3"; depends=[]; }; + pinnacle_API = derive2 { name="pinnacle.API"; version="1.92"; sha256="1a2s33sizg9q6iml56hbbs1c7hx5lz7v7hplhs0nv05vrh8cg9zm"; depends=[dplyr httr jsonlite RCurl rjson uuid XML]; }; + pipe_design = derive2 { name="pipe.design"; version="0.4"; sha256="00znnjqvppvn0qmrxkksiljgd51mf1x5zkmib43myckzwp5cap3i"; depends=[ggplot2 gtools xtable]; }; + pipeGS = derive2 { name="pipeGS"; version="0.1"; sha256="0ixfj52nd9785ny78wgsyq7srygsj3yg3p95pcb4lrrammchqygk"; depends=[]; }; + pipeR = derive2 { name="pipeR"; version="0.6.1.3"; sha256="16lj227x24pviqb4dcrj7a55l31p5mm0cbwsb6m3y3n6k5wcd2nh"; depends=[]; }; + pipefittr = derive2 { name="pipefittr"; version="0.1.2"; sha256="0pzd7f0rhn0rydncki666zlajdwyiay3apa17cb0xy5454d99mvh"; depends=[magrittr miniUI rstudioapi shiny stringr]; }; + pipeliner = derive2 { name="pipeliner"; version="0.1.1"; sha256="1cyyd1bin89dh0zrhic3i541bj8nnaphg6jq2jqkhnxn2nvax11g"; depends=[]; }; + pirate = derive2 { name="pirate"; version="1.0.0"; sha256="160mmyqdwbc4g7n7q9i4xcqp6h9bcpcz7vavsgdcpvs2mjfhfpjx"; depends=[ggplot2 MASS plyr Rcpp RcppArmadillo]; }; pitchRx = derive2 { name="pitchRx"; version="1.8.2"; sha256="0lg0xab40r8wzrww986l5q9jkg1m83g4bhsbh0kr7f2rv90av662"; depends=[ggplot2 hexbin MASS mgcv plyr XML2R]; }; - pixiedust = derive2 { name="pixiedust"; version="0.6.1"; sha256="170550dsmc1c5qk288d6qw9xhxn415fgncyf4gqdsl6b5h632c11"; depends=[ArgumentCheck broom dplyr Hmisc htmltools knitr lazyWeave magrittr stringr tidyr]; }; + pixiedust = derive2 { name="pixiedust"; version="0.7.4"; sha256="1v4biqbs18x7a8li85zqk8pwd4bxirvda6nrws8pyz0g77j74nj4"; depends=[broom checkmate dplyr Hmisc htmltools knitr lazyWeave magrittr stringr tidyr]; }; pixmap = derive2 { name="pixmap"; version="0.4-11"; sha256="04klxp6jndw1bp6z40v20fbmdmdpfca2g0czmmmgbkark9s1183g"; depends=[]; }; - pkgKitten = derive2 { name="pkgKitten"; version="0.1.3"; sha256="1f7jkriib1f19mc5mdrymg5xzdcyclfvh1220agy4lpyprxgza0f"; depends=[]; }; + pkgKitten = derive2 { name="pkgKitten"; version="0.1.4"; sha256="0c44zrvpyz87s5mjhsqdrkyrvyzhyldnq371bwnn9crbpbac3wnd"; depends=[]; }; pkgconfig = derive2 { name="pkgconfig"; version="2.0.0"; sha256="1wdi86qyaxq1mwkr3nrax3ab7hhj2gp1lbsyqnbcc9vzg230nh0r"; depends=[]; }; + pkgcopier = derive2 { name="pkgcopier"; version="0.0.1"; sha256="04vpjf8nvqnpry54f1wwrnmipd5m6gqd89c3vkryqx88jk85jd8s"; depends=[httr stringr]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.22"; sha256="0vrqnd3kg6liqvpbd969jjsdx0f0rvmmxgdbwwrp6xfmdg0pib8r"; depends=[codetools digest registry stringr xtable]; }; - pks = derive2 { name="pks"; version="0.3-1"; sha256="1nr36k960yv71yfxkzchjk814sf921hdiiakxvv5f9dxpf00hxp4"; depends=[sets]; }; + pkmon = derive2 { name="pkmon"; version="0.9"; sha256="1zcjz1h45qv81rwnjsgc9iwmrwpnsy917y7h66pz98wzszlxcsd2"; depends=[]; }; + pks = derive2 { name="pks"; version="0.4-0"; sha256="0fx7p2d83x0ip65aqp9dga59d9cggam8k79mi0drk5birzchqbcr"; depends=[sets]; }; plRasch = derive2 { name="plRasch"; version="1.0"; sha256="1rnpvxw6pzl5f6zp4xl2wfndgvqz5l3kiv9sh4cpvhga0gl8zjaw"; depends=[survival]; }; pla = derive2 { name="pla"; version="0.2"; sha256="1qb71zjcxvs3zbfy0sryyxizwix0nw530zsfw661a8vm8sk054kw"; depends=[]; }; + plac = derive2 { name="plac"; version="0.1.1"; sha256="08kqnjzbfygnbqvqg5wyw148kfhjqxy46y4vaiq9zzwzj58w8vzn"; depends=[Rcpp RcppEigen survival]; }; + placement = derive2 { name="placement"; version="0.1.1"; sha256="1narjb90sb5prvzfv2x30bz8y9aq8hqggza91ghwi47m99vm1dg6"; depends=[base64enc digest jsonlite RCurl stringi urltools]; }; plan = derive2 { name="plan"; version="0.4-2"; sha256="0vwiv8gcjdbnsxd8zqf0j1yh6gvbzm0b5kr7m47ha9z64d7wxch6"; depends=[]; }; planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; }; - planor = derive2 { name="planor"; version="0.2-4"; sha256="0k5rhrnv2spsj2a94msgw03yyv0hzrf8kvlnbhfj1dl7sb1l92a1"; depends=[conf_design]; }; - plantecophys = derive2 { name="plantecophys"; version="1.0-2"; sha256="1lb5jzigwabqdcb11chlkv4xdbazlnda70scj49x13hmgk7j8lz5"; depends=[]; }; - plaqr = derive2 { name="plaqr"; version="1.0"; sha256="1vv15zqnmir5hi9ivyifzrc1rkn1sn5qj61by66iczmlmhqh17h8"; depends=[quantreg]; }; + planor = derive2 { name="planor"; version="1.0-1"; sha256="1wi1s41wwk4zi5sqzm5flaphrpffqv8bhsgzdpknmnhp1nn0hllv"; depends=[conf_design]; }; + plantecophys = derive2 { name="plantecophys"; version="1.1-8"; sha256="02425j4pgwqadg2zn7vyl4741panif236m89zm36p580chp23wir"; depends=[]; }; + plaqr = derive2 { name="plaqr"; version="1.1"; sha256="0hkzfxph2lacrd4npqvf4pyaldr1z56hlfbj3gi7qjlflxqnv3xp"; depends=[quantreg]; }; + plater = derive2 { name="plater"; version="1.0.0"; sha256="0nbkfqrz78zgf06lsfzmwj50lfbq3dvi01j4rlbb6dwamx2cn3sf"; depends=[dplyr]; }; + platetools = derive2 { name="platetools"; version="0.0.2"; sha256="0xan3h3djhgjbqn8f7yzlkm25l0fzq86zhb5xwfib4yajnb2dspa"; depends=[dplyr ggplot2 plyr RColorBrewer]; }; playwith = derive2 { name="playwith"; version="0.9-54"; sha256="1zmm8sskchim3ba3l0zqfvxnrqfmiv94a8l6slcf3if3cf9kkzal"; depends=[cairoDevice gridBase gWidgets gWidgetsRGtk2 lattice RGtk2]; }; - plfMA = derive2 { name="plfMA"; version="1.0.2"; sha256="0ji3070hwyiqikpmlw7pn16mbfpgqpn6mgf4836r0vk6j3bd3fd0"; depends=[cairoDevice gWidgets gWidgetsRGtk2 limma]; }; + pleiades = derive2 { name="pleiades"; version="0.1.0"; sha256="0y7y6c4605nx70xabwfqzmz7piqmvczzcf56y8skvr7qpx7iwhbp"; depends=[crul dplyr gistr jsonlite rappdirs RSQLite]; }; + pleio = derive2 { name="pleio"; version="1.1"; sha256="01w1z5m65z0wrlsdbs7jc9l5sp73jr55xwqdaqp76cf6kvbd6yb8"; depends=[Matrix]; }; + plfMA = derive2 { name="plfMA"; version="1.0.3"; sha256="10cb12kxzh9ymzk59d310wqn213d8syp8a4rd5ayzkp9wlf3lksn"; depends=[cairoDevice gWidgets gWidgetsRGtk2 limma]; }; plfm = derive2 { name="plfm"; version="2.1"; sha256="19l5n7syp6xcj4d5qxccsard70d5q8ph1f87prj2zgpq5spyp7an"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; - plm = derive2 { name="plm"; version="1.5-12"; sha256="0zsdm0d6vvyliz7k3l2b8xzp1qp8yahibczzhnrmm9py6sp8m7jz"; depends=[bdsmatrix car Formula lattice lmtest MASS nlme sandwich zoo]; }; + plm = derive2 { name="plm"; version="1.6-5"; sha256="00zipzxg1d8w6ih586hlqv6bkyn5d01ppik8z35by3r1q6rlkpx2"; depends=[bdsmatrix car Formula lattice lmtest MASS nlme sandwich zoo]; }; plmDE = derive2 { name="plmDE"; version="1.0"; sha256="19xxi0zzpxcrsdrbs0hiwqgnv2aaw1q3mi586wv27zz6lfqcr9lr"; depends=[limma MASS R_oo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-1"; sha256="09zg7zwmmqpjr1j59lqsjf4blrkya9wfwddgzfm9rr5jxrzvqcv8"; depends=[]; }; + plogr = derive2 { name="plogr"; version="0.1-1"; sha256="13zliqlbkl8b04k9ga0sx5jsh7k867gracgl84l2a9kcqy9mqx92"; depends=[]; }; plot3D = derive2 { name="plot3D"; version="1.1"; sha256="1xy4h9k1ddz040ns7dfqqckkmb165f2h4xfz44h8lfwazr59dzgg"; depends=[misc3d]; }; + plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.1"; sha256="12p4qc9vmhr86ssx6xnz3cmx84q5jgd28bw9dp4wjrn04n6l4va6"; depends=[plot3D rgl]; }; plotGoogleMaps = derive2 { name="plotGoogleMaps"; version="2.2"; sha256="0qv57k46ncg0wrgma0sbr3xf0j9j8cii3ppk3gs65ardghs3bf6b"; depends=[lattice maptools raster rgdal sp spacetime]; }; - plotKML = derive2 { name="plotKML"; version="0.5-5"; sha256="15gdn2dq6jy6rd1xiahqnkg7l7j033906vg5qp8myjxqmlcqk7h4"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; + plotKML = derive2 { name="plotKML"; version="0.5-6"; sha256="091zzk30bsdxqzfh2p3xvk6fhijcw1143ccrkyd5srp8vc97bxhz"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; plotMCMC = derive2 { name="plotMCMC"; version="2.0-0"; sha256="0i4kcx6cpqjd6i16w3i8s34siw44qigca2jbk98b9ligbi65qnqb"; depends=[coda gplots lattice]; }; + plotMElm = derive2 { name="plotMElm"; version="0.1.4"; sha256="17fif2rqsf4f9jr4s7nr7wikwg63nibz6yjkldf7yh1qqqfikd2g"; depends=[ggplot2 interactionTest]; }; plotROC = derive2 { name="plotROC"; version="2.0.1"; sha256="1r80712svlm8kfbnymv27wrn60bckxnmq1rva3caln5b58swzcdk"; depends=[ggplot2 gridSVG plyr shiny]; }; - plotSEMM = derive2 { name="plotSEMM"; version="2.1"; sha256="0xpq8h7xm9p25wcfp9av0vwz4hdm4ibrwy68pff8fdf7bb1fy49w"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; - plotly = derive2 { name="plotly"; version="3.4.1"; sha256="0krx2gnji6fr5gw46yva1dir32z2m50qlnh7h6mhs7w89cbfqwvp"; depends=[base64enc digest ggplot2 htmlwidgets httr jsonlite magrittr plyr scales tidyr viridis]; }; - plotmo = derive2 { name="plotmo"; version="3.1.4"; sha256="0b12w6sg317vgmhyn4gh9jcnyps1pyqnh5ai15y1dfajsf2zjhca"; depends=[plotrix TeachingDemos]; }; + plotSEMM = derive2 { name="plotSEMM"; version="2.2"; sha256="08px2ng2lxhfkjmr6w26rxqzpqa18adjn59g14c29jqzx6s2m5h2"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; + plotfunctions = derive2 { name="plotfunctions"; version="1.0"; sha256="16q5qzfkia4lhmx8wkajxcj6vn9nb6388fi8mr33g2n2pv721yax"; depends=[]; }; + plotluck = derive2 { name="plotluck"; version="1.1.0"; sha256="0arbvldg50lyn98vkrys1yjkkraz8jracwal4r2mlw991pnaikpp"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; + plotly = derive2 { name="plotly"; version="4.5.6"; sha256="09yw977yxlcxv57kni3q899zrxyxa6pznr06cylr9lqkyr7llfhx"; depends=[base64enc digest dplyr ggplot2 hexbin htmlwidgets httr jsonlite lazyeval magrittr purrr scales tibble tidyr viridisLite]; }; + plotmo = derive2 { name="plotmo"; version="3.3.2"; sha256="030ba2c1g61a9wd4994pk8c32amj23ar7vghynkqz6ppb2nfzx8i"; depends=[plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; - plotrix = derive2 { name="plotrix"; version="3.6-1"; sha256="1y8xnlpy4zba70af9lwj2sshvfdfcmfdh92wamyzj8z9gciailfr"; depends=[]; }; - pls = derive2 { name="pls"; version="2.5-0"; sha256="135pqb6frjldv86fs00p2mgrc9vjna3jvns3slj5a300drajja1w"; depends=[]; }; + plotrix = derive2 { name="plotrix"; version="3.6-4"; sha256="1wxzjnzvkl3aga51ad2xhv4s7v46kvnp4z0nz4cb9cn10057sfw8"; depends=[]; }; + plotrr = derive2 { name="plotrr"; version="0.2.0"; sha256="12kab7w32hcdqmwh3nfpk1zqkgnvpx3p0292w47643ahl26s9whj"; depends=[dplyr ggplot2]; }; + plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; }; + pls = derive2 { name="pls"; version="2.6-0"; sha256="15j59p5x0rkdrk7iqzkipsy50rsyjl31w8zxc4w3v1j5gzxhi1rx"; depends=[]; }; plsRbeta = derive2 { name="plsRbeta"; version="0.2.0"; sha256="1b8yldz5nzw3gilv9wk79bxcqb0hrgsxi2cn6qlby5nf9b4zmzv8"; depends=[betareg boot Formula MASS mvtnorm plsdof plsRglm]; }; plsRcox = derive2 { name="plsRcox"; version="1.7.2"; sha256="1c3ll13m27ndwlc9r79ilzl0i6cyp870x66swlbg6387whf7wn2r"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; plsRglm = derive2 { name="plsRglm"; version="1.1.1"; sha256="1bx1pl1pv47z3yj3ngkd97j10v2h8jqiybcqbm3kvqhgqydm07rp"; depends=[bipartite boot car mvtnorm]; }; + plsVarSel = derive2 { name="plsVarSel"; version="0.9.1"; sha256="0jwhdcrr68562q83528h7x3kjadfzn6j5l02axyfvflzgdnxwcnc"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; }; plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; plsdof = derive2 { name="plsdof"; version="0.2-7"; sha256="1z8z9m0nsnyy1fipzvm1srpxn3q6wjrlivmmki1f8plwkixkyc5y"; depends=[MASS]; }; plsgenomics = derive2 { name="plsgenomics"; version="1.3-1"; sha256="0vddhzqfix8q692mdls227m2l6zjzbjwp1ia5j9shy71ycg2fzn9"; depends=[boot MASS]; }; plspm = derive2 { name="plspm"; version="0.4.7"; sha256="0iy4qw4zjgqxg93a827qjcm32yipmnrl4gzn4hmskjd4khm9ngwd"; depends=[amap diagram shape tester turner]; }; plspm_formula = derive2 { name="plspm.formula"; version="1.0.1"; sha256="1i2d1q8pz21js1ci8afnqzcky430hh1iwf5f6jr3j9yr9gs365k5"; depends=[plspm]; }; + plspolychaos = derive2 { name="plspolychaos"; version="1.1-0"; sha256="1qq0f95ndpiykbizyivjcbjbbmqqns08i1dkjn3n7k2r9130z8rx"; depends=[lhs MASS]; }; plugdensity = derive2 { name="plugdensity"; version="0.8-3"; sha256="1jdmq4kbs8yzgkf9f5dc7c8c52ia68fgavw7nsnc2hnz5ylw1qy9"; depends=[]; }; + plumber = derive2 { name="plumber"; version="0.3.1"; sha256="0li34ldwc8qi7jg37pqaa4b5ql6ybci9a3wh2a48gb8nyb380r2b"; depends=[httpuv jsonlite R6 stringi]; }; plumbr = derive2 { name="plumbr"; version="0.6.9"; sha256="1avbclblqfy57pd72ximvj3zq92q1w8vszvyf6fw75j5rfwdaibk"; depends=[objectSignals]; }; plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; - plyr = derive2 { name="plyr"; version="1.8.3"; sha256="06v4zxawpjz37rp2q2ii5q43g664z9s29j4ydn0cz3crn7lzl6pk"; depends=[Rcpp]; }; - pmc = derive2 { name="pmc"; version="1.0.1"; sha256="19yphb0834qriq7w2y287750rrc0kqibx76yx95qwyh6ymzcvha2"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; + plyr = derive2 { name="plyr"; version="1.8.4"; sha256="1igar5pcjqh0jyxv0z3jah8rz617vfa86vw0r5c7c031b7bj5db0"; depends=[Rcpp]; }; + pmc = derive2 { name="pmc"; version="1.0.2"; sha256="1pamxg2cwyg36w0xnggrv5w03lb12l25z2da7xm1jvr17h0ipqmh"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; - pmclust = derive2 { name="pmclust"; version="0.1-7"; sha256="1k6lllhx8ki9c8kkl6al75zqy50h570j49242wb39h50s78bxp00"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; + pmclust = derive2 { name="pmclust"; version="0.1-9"; sha256="1p506d3gs0i46zjdia0pc71wwfv6nrfkmk5qaan5sdz6vn24zjhj"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; pmg = derive2 { name="pmg"; version="0.9-43"; sha256="0i7d50m4w7p8ipyx2d3qmc54aiqvw0ls8igkk8s1xc7k8ympfqi6"; depends=[foreign gWidgets gWidgetsRGtk2 lattice MASS proto]; }; + pmhtutorial = derive2 { name="pmhtutorial"; version="1.0.0"; sha256="0r1yw65ixm3zjpiwg800rfwr1p26i6apv4332pgfl84hj5vvp3ws"; depends=[mvtnorm Quandl]; }; pmlr = derive2 { name="pmlr"; version="1.0"; sha256="1z3hbw4wabpai1q8kbn77nzxqziag8y04cidlfiw7z969s4pkmgl"; depends=[]; }; - pmml = derive2 { name="pmml"; version="1.5.0"; sha256="192jffh9xb7zfvx4crpynrbdrx1fpiq303c2xz1wjqnq7wjmb3qw"; depends=[survival XML]; }; + pmml = derive2 { name="pmml"; version="1.5.1"; sha256="1w53lkzsgi8d3h89zpr4la3r52mhqxr6a7hazhsmvwhjfkz874ki"; depends=[survival XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.0"; sha256="17dhgpldwadsvm25p8xwqsamcn1ypsqdijy2jia048qqmsy4ky86"; depends=[]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; - pnea = derive2 { name="pnea"; version="1.2.4"; sha256="1yfh1z09x822zzila6kq82s5cn4sgnbprwmim251y61k3xw0ad9m"; depends=[]; }; - pnf = derive2 { name="pnf"; version="0.1.1"; sha256="0kasq27dnjwqzlzybc8m3wv9jwyag6z38ayv88msa7lxcnibr34i"; depends=[]; }; png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; }; pnmtrem = derive2 { name="pnmtrem"; version="1.3"; sha256="0053gg368sdpcw2qzydpq0c5v2cxdlwgf5k68cbw0yx41csjgvz0"; depends=[MASS]; }; pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; }; poLCA = derive2 { name="poLCA"; version="1.4.1"; sha256="0bknnndcxsnlq6z9k1vbhqiib1mlzlx4badz85kc7a3xbrdrfs9f"; depends=[MASS scatterplot3d]; }; pocrm = derive2 { name="pocrm"; version="0.9"; sha256="0p7a7xm1iyyjgzyi7ik2n34gqc3lsnallrijzdakghb8k5cybm4m"; depends=[dfcrm nnet]; }; - pogit = derive2 { name="pogit"; version="1.0.1"; sha256="19sawm7j5fa9s1nlz4hvhpgjj7n3rrnsh2m5a6scxis4brnaa98n"; depends=[BayesLogit ggplot2 logistf plyr]; }; + pogit = derive2 { name="pogit"; version="1.1.0"; sha256="145dh48scxx4wcdr2g7548vg4g03w1ji7hz91752im9a27v7s4pa"; depends=[BayesLogit ggplot2 logistf plyr]; }; poibin = derive2 { name="poibin"; version="1.2"; sha256="12dm1kdalbqy8k7dfldf89v6zw6nd0f73gcdx32xbmry2l2976sa"; depends=[]; }; poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; }; - pointRes = derive2 { name="pointRes"; version="1.1.1"; sha256="1l1rn3siz1rgwx41vgknjxsiklkk2q1sycnlgd394j62v0pl23am"; depends=[ggplot2 gridExtra plyr TripleR]; }; + pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; pointdensityP = derive2 { name="pointdensityP"; version="0.2.1"; sha256="013vamdh987w56bmz0m6j2xas4ycv1zwxs860rs5z4i55dhgf9kh"; depends=[]; }; + poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; poisson = derive2 { name="poisson"; version="1.0"; sha256="1diyf1b84sr6iai3ghd3kcp6fc6w7fan49wzs1lzvxxsmp15ag2d"; depends=[]; }; poisson_glm_mix = derive2 { name="poisson.glm.mix"; version="1.2"; sha256="0328m279jfa1fasi9ha304k4wcybzr7hldww7wn0cl7anfxykbv8"; depends=[]; }; poistweedie = derive2 { name="poistweedie"; version="1.0"; sha256="18992fafypds3qsb52c09fasm3hzlyh5zya6cw32wnhipmda643m"; depends=[]; }; polidata = derive2 { name="polidata"; version="0.1.0"; sha256="07641v0dnn161kyxx7viplkf8c3r51hd4hd5pzmcph4y4387r01i"; depends=[jsonlite RCurl]; }; - pollstR = derive2 { name="pollstR"; version="1.2.2"; sha256="1ii832gil8ppwf8hd8simnbqbc4yq75myb2zin9wmimm5zaqzn2s"; depends=[httr jsonlite plyr]; }; + poliscidata = derive2 { name="poliscidata"; version="1.2.0"; sha256="0vn9wdlh3bi24mcq0r4ani2b0hhlg1za1z6fw8ikz7952gpacqk8"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; + pollen = derive2 { name="pollen"; version="0.50.0"; sha256="1f6bjh7vkwyma8jzigdcijazmzr2mhnmwmaf135lx81d044xj2zr"; depends=[dplyr lubridate purrr]; }; + pollstR = derive2 { name="pollstR"; version="2.0.0"; sha256="0lcxhi1mazs8nh9hbbqyqx4axn5lji5fnp0kxrjwjxmzf59nksj8"; depends=[httr lubridate purrr stringr]; }; + polmineR = derive2 { name="polmineR"; version="0.7.0"; sha256="13ncdqn1wh5rcad79l0d388qnyi3171djfbz3qjkzw05n3q8rk57"; depends=[data_table DT foreach Matrix R6 slam tm]; }; polspline = derive2 { name="polspline"; version="1.1.12"; sha256="0chg5f6fq5ngjp1kkm4kjyxjc3kk83ky2ky5k7q3rhd8rkhd4szw"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.5-2"; sha256="1j28ia53za3sh9q7q1g5bnmlb5mbzf44bcwzv0919lvkw01f2lvj"; depends=[sp spatstat]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-4"; sha256="05kvj475zhlrmp7rm691cfs28igp4ac2cn2xxf7axx09v1nq33db"; depends=[gdata]; }; @@ -6271,39 +7833,45 @@ in with self; { polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; polyapost = derive2 { name="polyapost"; version="1.4-2"; sha256="0nr8mw0k79kz5zd1k81kz0i940vmlzqqscn1z1yaik0rx8i7mhs7"; depends=[boot rcdd]; }; polychaosbasics = derive2 { name="polychaosbasics"; version="1.1-0"; sha256="0yb119y0a2xjsijxbrxgksnhf3m997dgp9d57wghq68dsfjp3hf3"; depends=[lhs MASS]; }; - polyclip = derive2 { name="polyclip"; version="1.4-1"; sha256="0aaqakzxba9xqnr3wd7x3r7qkk16gb9d6kgbgrnxd1vn15p449j6"; depends=[]; }; - polycor = derive2 { name="polycor"; version="0.7-8"; sha256="0hvww5grl68dff23069smfk3isysyi5n2jm4qmaynrk0m3yvhxwn"; depends=[mvtnorm sfsmisc]; }; - polyfreqs = derive2 { name="polyfreqs"; version="1.0.0"; sha256="01rl3s7dav1i643fq3r9x8brff48xi49jqiv3hsh8rlifny8wf0z"; depends=[Rcpp RcppArmadillo]; }; - polynom = derive2 { name="polynom"; version="1.3-8"; sha256="05lng88c8cwj65cav31hsrca9nbrqn5rmcz79b17issyk2j0g86p"; depends=[]; }; - polysat = derive2 { name="polysat"; version="1.4-1"; sha256="0n44l66x270biigwf8lwbzsqd3p4zv40firrw07sfbf779cbwd3h"; depends=[]; }; + polyclip = derive2 { name="polyclip"; version="1.5-6"; sha256="1ypwvgd5z61md539z7ndmpl8vaifsjbm231n08zsxskskj1fid7y"; depends=[]; }; + polycor = derive2 { name="polycor"; version="0.7-9"; sha256="0d0756faksviic5jrc47fg6l3wsm9r2wlbnxiw08563rv7shbvb7"; depends=[Matrix mvtnorm]; }; + polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; }; + polynom = derive2 { name="polynom"; version="1.3-9"; sha256="1s4xxv5rvpigawknvq27v9vzvs83phfsj5h8mim2lmf5bj950nnk"; depends=[]; }; + polysat = derive2 { name="polysat"; version="1.6-0"; sha256="180hf1m2pd9jcz02q0jq3s5sv5h73qc20w3b2sx1psdbyzdk9006"; depends=[]; }; polywog = derive2 { name="polywog"; version="0.4-0"; sha256="0wl9br0g4kgi3nz2fq28nsk6fw0ll0y715v4vz8lv3pvfwc7518j"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; - pomp = derive2 { name="pomp"; version="1.3.1.1"; sha256="1jy20h9qk80plizsqjbynvadphxz7hnji3pgl6ln48cddgn26qjf"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; + pomp = derive2 { name="pomp"; version="1.10"; sha256="1v4mkgn0vn83kgl2la94gnc5g1xxkk1h5gxvjyzkqgkakaigwmsx"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; pooh = derive2 { name="pooh"; version="0.3-1"; sha256="0fn711jyn18byfc2nq3y154k8rb39vpnfw1a0xw73pqp1cwd2i73"; depends=[]; }; - popEpi = derive2 { name="popEpi"; version="0.2.1"; sha256="0xna95gqqbqlfxaarzvyq4c724sxqw0fh9kn46sf674lr13n0jj2"; depends=[data_table Epi]; }; + pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; + pop_wolf = derive2 { name="pop.wolf"; version="0.1"; sha256="19n00xv47v9j7slvm2ykzlksjfwjzimf88b3nk0y0192c29sdc9x"; depends=[abind]; }; + popEpi = derive2 { name="popEpi"; version="0.4.1"; sha256="0n4kf3h6zgr7sc2bk8bbrf5bvaybnacy6vsqck63gfdn3kkc43m2"; depends=[data_table Epi survival]; }; popKorn = derive2 { name="popKorn"; version="0.3-0"; sha256="1zcl6ms7ghbcjyjgfg35h37ma8nspg15rk2ik82yalqlzxjf7kxw"; depends=[boot]; }; popRange = derive2 { name="popRange"; version="1.1.3"; sha256="0kkz6va0p8zv3skaqqcpw42014d9x9x4ilx0czz91qf46h61jgb0"; depends=[findpython]; }; popReconstruct = derive2 { name="popReconstruct"; version="1.0-4"; sha256="14lp0hfnzbiw81fnq7gzpr4lxyfh3g0428rm9jwjh631irz3fcc9"; depends=[coda]; }; - popbio = derive2 { name="popbio"; version="2.4.2"; sha256="1p0699hvc0qbp5sgxh812rbmkiqxbm8c9zrv4m9iq9dq5ad53zrc"; depends=[]; }; - popdemo = derive2 { name="popdemo"; version="0.1-4"; sha256="0syhmm8fnxbsdzj75y7dpahmpf453a6gwp3yljkvmfl0bfv1g1ng"; depends=[expm]; }; + popbio = derive2 { name="popbio"; version="2.4.3"; sha256="1c34izyp6gpic3yv1rhg1snv2irw0bj9r1w9b892l7x0mxxmn2bl"; depends=[]; }; + popdemo = derive2 { name="popdemo"; version="0.2-3"; sha256="0r3qdvwjwqzqxk3zp9vfzxwmc5fhjzn0ka91b37g62nanwxiyayw"; depends=[expm]; }; popgraph = derive2 { name="popgraph"; version="1.4"; sha256="1z6w6vj3vl2w10hvzwmkw4d475bqcd6ys92xnn445ag6vpq0cvxq"; depends=[ggplot2 igraph MASS Matrix sampling sp]; }; poplite = derive2 { name="poplite"; version="0.99.16"; sha256="0yp1hfda2k6c5x0gbcfxj9h6igzx3ra05xs7g88wjz76yxp3wb6w"; depends=[DBI dplyr igraph lazyeval RSQLite]; }; - poppr = derive2 { name="poppr"; version="2.1.1"; sha256="1sav268n00h56ppc4adda4qpbmx3wsjyiz4q784qwzf6i6f46faa"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph pegas phangorn reshape2 shiny vegan]; }; - popprxl = derive2 { name="popprxl"; version="0.1.1"; sha256="0zcl4kbb9yrrkkky9qx30g42qphibi7mq1bwkncw2dn5gjkx4zf8"; depends=[poppr readxl]; }; - popsom = derive2 { name="popsom"; version="3.0.1"; sha256="0qj4l5cdzrhiaq1q6q7wv75jnbfvw1rrms2v6ffw34wz4fs1w6is"; depends=[fields som]; }; + poppr = derive2 { name="poppr"; version="2.3.0"; sha256="0zhmsx23fjjl8zy7s0gyzd0br4imdl2hfgk0g9v9p2ff72xg046d"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn reshape2 shiny vegan]; }; + popprxl = derive2 { name="popprxl"; version="0.1.3"; sha256="1l842zgn04s8ghbcp8s2lzg7lgc809xd7hg9crnyp23c2cr0jlvi"; depends=[poppr readxl]; }; + popsom = derive2 { name="popsom"; version="4.0.1"; sha256="1qw6b00mz9i842askixc0288i41v8dfjwc58pa3cbgf6fhfjva9z"; depends=[class fields som]; }; + poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; population = derive2 { name="population"; version="0.1"; sha256="1xcm38hipasf6x5grsn7dqayy2g5mwppx2dvi5lwax5a6dqjk792"; depends=[abind]; }; portes = derive2 { name="portes"; version="2.1-3"; sha256="0nqh6aync5igmvg7nr5inkv2cwgzd0zi6ky0vvrc3abchqsjm2ck"; depends=[]; }; portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; + postGIStools = derive2 { name="postGIStools"; version="0.2.1"; sha256="1dmf77xpy61pqis3j9qzjjksmm9hkyhzxqdmjajpj7rkbqhl5qvp"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; potts = derive2 { name="potts"; version="0.5-4"; sha256="1818md2mdkf47r5vcqawnn84lanir9q6r72kf41lq4zbjkk2yazv"; depends=[]; }; - poweRlaw = derive2 { name="poweRlaw"; version="0.50.0"; sha256="1y9f21sl601rb1qsljgkbnsb9jd76k1k91n7cbz7iyzy8n345jgm"; depends=[VGAM]; }; + poweRlaw = derive2 { name="poweRlaw"; version="0.70.0"; sha256="1p2la3hslxq2xa8jkwvci6zcpn47cvyr9xqd5agp1riwwp2xw5gh"; depends=[VGAM]; }; powell = derive2 { name="powell"; version="1.0-0"; sha256="160i4ki3ymvq08szaxshqlz7w063493j5zqvnw6cgjmxs7y0vj8y"; depends=[]; }; - powerAnalysis = derive2 { name="powerAnalysis"; version="0.2"; sha256="15ff3wnn37sjkiyycgh16g7gwl3l321fbw12kv621dad5bki14jl"; depends=[]; }; + powerAnalysis = derive2 { name="powerAnalysis"; version="0.2.1"; sha256="0cma4v402n6wcb2gy9g1ymydzh8vimy9nfrrn8xhnjsf7x6jh215"; depends=[]; }; + powerEQTL = derive2 { name="powerEQTL"; version="0.1.3"; sha256="1045vkzl5p20mqlsm0j6vnyyvfz5v6jyy443c38sw1cps0a09i1n"; depends=[powerMediation]; }; powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; }; - powerMediation = derive2 { name="powerMediation"; version="0.2.4"; sha256="1b4hzai52fb0kk04az3rdbfk2vldfkhsa4gx7g98lbsvw4gh9imb"; depends=[]; }; + powerMediation = derive2 { name="powerMediation"; version="0.2.7"; sha256="1zqkwwlv57k5b86lcqjbdn11xgxayhsdqrq64n5pai8n4jxrkr5g"; depends=[]; }; powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.0.9"; sha256="0f8i867zc1yjdp66rjb1cp92fcfrlq167z3d0c4iv355wv4s35az"; depends=[survival]; }; + powerbydesign = derive2 { name="powerbydesign"; version="1.0.3"; sha256="0dv4j0kwdzvxnq587vs1dsy2yci3v3q2smncpscpcsalp38rvx4i"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; - powerplus = derive2 { name="powerplus"; version="1.0"; sha256="0k8kir2lcr8036phfnhgw573nhfqijlh56p3pzgzbchwzrj9z10r"; depends=[expm MASS Matrix phonTools]; }; + powerplus = derive2 { name="powerplus"; version="3.0"; sha256="0gm2iw6d7rpaxzpp66si9ra7vhw4gpwjm4b2dzf9fvq67bzdvcc6"; depends=[complexplus expm MASS Matrix phonTools]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; ppiPre = derive2 { name="ppiPre"; version="1.9"; sha256="07k2mriyz1wmxb5gka0637q4pmvnmd1j16mnkkdrsx252klgjsdw"; depends=[AnnotationDbi e1071 GO_db GOSemSim igraph]; }; ppls = derive2 { name="ppls"; version="1.6-1"; sha256="1r3h4pf79bkzpqdvyg33nwjabsqfv7r8a4ziq2zwx5vvm7mdy7pd"; depends=[MASS]; }; @@ -6312,30 +7880,42 @@ in with self; { pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; prabclus = derive2 { name="prabclus"; version="2.2-6"; sha256="0qjsxrx6yv338bxm4ki0w9h8hind1l98abdrz828588bwj02jya1"; depends=[MASS mclust]; }; - pracma = derive2 { name="pracma"; version="1.8.8"; sha256="0ans9l5rrb7a38gyi4qx4258sd5r5668vyrk02yzjpg9k3h8l165"; depends=[]; }; + pracma = derive2 { name="pracma"; version="1.9.9"; sha256="1g062d9lsjkqrd5m91h55pc3zcqha9drmdi4zqic4hx6qyyhy2q1"; depends=[quadprog]; }; pragma = derive2 { name="pragma"; version="0.1.3"; sha256="1n30a346pph4d8cj4p4qx2l6fnwhkxa8yxdisx47pix376ljpjfx"; depends=[]; }; prais = derive2 { name="prais"; version="0.1.1"; sha256="0vv6h12gsbipi0gnq0w6xh6qvnvc0ydn341g1gnn3zc2n7cx8zcn"; depends=[]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; prc = derive2 { name="prc"; version="2015.6-24"; sha256="0sf664zqcq6xylhd7rvm2l2xj3f4j6llaj7j4b4847wfxnas2j02"; depends=[kyotil nlme]; }; - prclust = derive2 { name="prclust"; version="1.1"; sha256="0dm7qjvwyrym3sff24k5zz87835dhldrm3qiyyx6xq92p0wn89jz"; depends=[Rcpp]; }; - precintcon = derive2 { name="precintcon"; version="2.2.1"; sha256="1z63aa8i2jyc0a8n5q1ny2p3mzxadyk1kk94rz8dp6j6kp2hxnf8"; depends=[ggplot2 scales]; }; - precrec = derive2 { name="precrec"; version="0.3.1"; sha256="0i131qzmvv1sscl6ngh4gd6i39whph697pwv2sycwr480cqw07pq"; depends=[assertthat ggplot2 gridExtra Rcpp]; }; - predictmeans = derive2 { name="predictmeans"; version="0.99"; sha256="1qfqh21d3m0k2491hv5rl5k4v49j5089xsdk3bxicp30l512rax0"; depends=[ggplot2 lattice lme4 nlme plyr]; }; + prcbench = derive2 { name="prcbench"; version="0.6.2"; sha256="1dg4d5x7w368bllgblp1c9kahv9dd43vdfxvv8i3c9nz003z84bs"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; + prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; + prcr = derive2 { name="prcr"; version="0.1.0"; sha256="0bm1jixkdz682721j78kigs6v6dyckj4va41ik4f94ikb5j2f7hh"; depends=[dplyr ggplot2 tibble tidyr]; }; + pre = derive2 { name="pre"; version="0.1"; sha256="1y9mz0rp1rf595n8b2fy6rncrw7d41d8vlxi6phclfdawv9bkn9z"; depends=[Formula glmnet MatrixModels partykit]; }; + preText = derive2 { name="preText"; version="0.4.4"; sha256="0ivzm9mcwnf9yrgvwzjiaqkpfv8fr7v8ci61gn8x09jiw8w8l5j4"; depends=[cowplot ecodist ggplot2 gridExtra proxy quanteda reshape2 topicmodels vegan]; }; + precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; + precrec = derive2 { name="precrec"; version="0.6.2"; sha256="100zr5932vm1rs359nzq4cxbx924az5d8zl9h7720fd5sgy4av7f"; depends=[assertthat ggplot2 gridExtra Rcpp]; }; + predatory = derive2 { name="predatory"; version="1.1"; sha256="18nv8riw380acvgb8iz771wzdgrmkrwcvdxbxhkbczcdhgw1p0ig"; depends=[readr stringr]; }; + prediction = derive2 { name="prediction"; version="0.1.1"; sha256="0ys0pds2x8nhkf45dp5f0pmp64al670w7xgr5hbifmykn2ivdiqr"; depends=[]; }; + predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; + predictmeans = derive2 { name="predictmeans"; version="0.99"; sha256="1qfqh21d3m0k2491hv5rl5k4v49j5089xsdk3bxicp30l512rax0"; depends=[ggplot2 lattice lme4 nlme pbkrtest plyr]; }; predmixcor = derive2 { name="predmixcor"; version="1.1-1"; sha256="0v99as0dzn0lqnbbzycq9j885rgsa1cy4qgbya37bbjd01b3pykd"; depends=[]; }; prefmod = derive2 { name="prefmod"; version="0.8-33"; sha256="0wklp3djy3z8lq0vrjrzqha6r8z00jwdm6d9ffyq5vhimmbirzj8"; depends=[colorspace gnm]; }; - prepdat = derive2 { name="prepdat"; version="1.0.7"; sha256="05i6iv4vk83lcmpsqcn85vq62p3irfmbf1zjs5prl2d88xlqj7w9"; depends=[dplyr psych reshape2]; }; - preprocomb = derive2 { name="preprocomb"; version="0.2.0"; sha256="0kfmdz926ianvy016hb6ba20qkh9pbgnzi1dali4bc4h8qhnjz5y"; depends=[arules caret clustertend DMwR e1071 randomForest zoo]; }; - preproviz = derive2 { name="preproviz"; version="0.1.1"; sha256="0k2jap204zqwbbq53vdvzks8kivyp7myg1s9srfd8x6jqcy045yi"; depends=[caret ClustOfVar DMwR ggdendro ggplot2 gridExtra randomForest reshape2]; }; - presens = derive2 { name="presens"; version="2.0.0"; sha256="1srrb1d2f5bszkcpi2xdq7ccjhsyp3dihfr0zqhn0m71whnzhi7z"; depends=[birk marelac]; }; - preseqR = derive2 { name="preseqR"; version="2.0.0"; sha256="06jxd7vndvf63bwlsyc3ydwiw5z88y1i87iqd32gchfrg4iaw6xl"; depends=[polynom]; }; + prepdat = derive2 { name="prepdat"; version="1.0.8"; sha256="19rxyss96cmjhzm69f6l1cd3vkw3wskzhxnbmrz4546x00gf9g5v"; depends=[dplyr psych reshape2]; }; + preprocomb = derive2 { name="preprocomb"; version="0.3.0"; sha256="08dhzil8prmjb6if0yba9pjncfxf5zzvlrrabva7c5jhny806c5g"; depends=[arules caret clustertend DMwR doParallel e1071 foreach randomForest zoo]; }; + preprosim = derive2 { name="preprosim"; version="0.2.0"; sha256="1z10ranfal51vzsnndfaw5aqddh2w1xx8h50j1p7gx4fi90d0waq"; depends=[caret DMwR doParallel e1071 foreach ggplot2 reshape2]; }; + preproviz = derive2 { name="preproviz"; version="0.2.0"; sha256="0jb85qkzywsd2iyfynd8ngkc136m4qc38phc3fgxm2qw30dacmyh"; depends=[caret ClustOfVar DMwR ggdendro ggplot2 gridExtra randomForest reshape2]; }; + prereg = derive2 { name="prereg"; version="0.2.0"; sha256="098352svjdf8cfmb9qwbv71xb4irxcr70r06bvnqdv5bliq9fzin"; depends=[rmarkdown]; }; + presens = derive2 { name="presens"; version="2.1.0"; sha256="175nr9pqn3m6kh9bcc1gxqmqv05xdsqdw9lx385lmm1g947d2159"; depends=[marelac measurements]; }; + preseqR = derive2 { name="preseqR"; version="3.0.0"; sha256="07pwqn985dg5kjx65gfgcyg1nywjpxaswa7i6nsr8h0cr7a2mc9j"; depends=[polynom]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.5"; sha256="19jag5cymancxy5lvkj5mkhdbxr37pciqj4vdvmxr82mvw3d75m4"; depends=[]; }; prettyR = derive2 { name="prettyR"; version="2.2"; sha256="026cgbrqs799lg06qlwx1r9ramil790qxrb1cyl4w7mzf8sfpgn9"; depends=[]; }; - prettymapr = derive2 { name="prettymapr"; version="0.1.4"; sha256="02ha33fppxj4hp7xicpzjri50cbvgzx0mi3nlxc60zvb5gm0zgkk"; depends=[digest foreach rgdal rjson sp]; }; + prettycode = derive2 { name="prettycode"; version="1.0.0"; sha256="1zba83b5sk8jyag8jz8gipn6qpxwfsfg1xcxamfvpmzjicajzhbx"; depends=[crayon withr]; }; + prettydoc = derive2 { name="prettydoc"; version="0.2.0"; sha256="1zpvi4lyjazhj2h6m3j46x93s9c2300xqylaqy6gp1yjn9im36dp"; depends=[rmarkdown]; }; + prettymapr = derive2 { name="prettymapr"; version="0.1.5"; sha256="1mccqidbnyl31wzbf5ly8qv23v6zha1chqna59j97cc2m3rhkqdf"; depends=[digest foreach rgdal rjson sp]; }; prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; }; prevR = derive2 { name="prevR"; version="3.3"; sha256="11syifnv0mgbybsphgaj3a2j29p2q0l4y4w008n2r9s359arjj8m"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; prim = derive2 { name="prim"; version="1.0.16"; sha256="0i5jpk798qbvyv9adgjbzpg4dvf7x51bcgbdp38fzdnam6g88y5a"; depends=[misc3d rgl]; }; + primefactr = derive2 { name="primefactr"; version="0.1.0"; sha256="1p0hlf0llyfccg0pa2fccxp8zzhwsyrpd18d8ih1z7mx88kyrhwm"; depends=[]; }; primer = derive2 { name="primer"; version="1.0"; sha256="0vkq794a9qmz9klgzz7xz35msnmhdaq3f91lcix762wlchz6v7sg"; depends=[deSolve lattice]; }; primerTree = derive2 { name="primerTree"; version="1.0.3"; sha256="0k81h6ln9yjg3r4j8n5f8g8xlrq1pvrr5ywrw16s4mjjhx3r1ylg"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr scales stringr XML]; }; primes = derive2 { name="primes"; version="0.1.0"; sha256="0hhkgpkadvai9xcivfalsvr5w0irsxygyz3p2zngwl3g5rvvh5g9"; depends=[Rcpp]; }; @@ -6343,831 +7923,1066 @@ in with self; { prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; prism = derive2 { name="prism"; version="0.0.7"; sha256="03z1m09vf2gd277xp3y5nhvgrp0fnbr2x0r9b92kp46ca09fq9y8"; depends=[ggplot2 httr raster]; }; pro = derive2 { name="pro"; version="0.1.1"; sha256="0f0iliq7bhf313hi0jbwavljic4laxfc0n3gac5y6hzm39gvvgag"; depends=[]; }; - prob = derive2 { name="prob"; version="0.9-5"; sha256="05skjqimzhnk99z864466dc8qx58pavrky320il91yqyr8b98j8b"; depends=[combinat fAsianOptions hypergeo VGAM]; }; + prob = derive2 { name="prob"; version="1.0-0"; sha256="0gnp3q3dm176c1n7vdgisv3p11m2jk1hiza1yi8qaqyd9mfh86bg"; depends=[combinat fAsianOptions]; }; probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; }; probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; }; - prodlim = derive2 { name="prodlim"; version="1.5.7"; sha256="11dhzfw3daanmpnwyynx2q2mwkn8fihi4rsikl1f7rmzadis4ixd"; depends=[KernSmooth lava Rcpp survival]; }; + proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; + processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; + prodigenr = derive2 { name="prodigenr"; version="0.3.0"; sha256="1217l9r012xrgzna1bf9z31n2gw36h6grga3949kg7ghxrzjbm4q"; depends=[devtools]; }; + prodlim = derive2 { name="prodlim"; version="1.5.9"; sha256="0hkv3y0j8crssvw7ck7m4vhzkwsbwl1nwsyjdmzjw42pdj448dl5"; depends=[KernSmooth lava Rcpp survival]; }; + productivity = derive2 { name="productivity"; version="0.1.0"; sha256="0hbysja40yv5ssiq4c3dn5bwypjhjdf1g3x56zms2ck78sk75zxk"; depends=[doParallel foreach Rglpk]; }; + productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; + prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; }; profileModel = derive2 { name="profileModel"; version="0.5-9"; sha256="1p9b9jr5842im195d60ja82pp7vbk85vs8b0r3fnf62j4b92aky9"; depends=[]; }; - profileR = derive2 { name="profileR"; version="0.3-2"; sha256="0mr8gzw8055bmqla3kz8g996mnwdki1m3dlxhyrig8h2fy1gmx5a"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; + profileR = derive2 { name="profileR"; version="0.3-3"; sha256="0yc0bgcv8g4qm777l8czvwcw4gsrsgc1f2qgllyid6wsnvw25x6v"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; profilr = derive2 { name="profilr"; version="0.1.0"; sha256="0rw5cjvvrgsdmhgrsaw4skfdk8h488b6mkmibgjj3dd3x0j3caq6"; depends=[]; }; + profmem = derive2 { name="profmem"; version="0.4.0"; sha256="1nnk145hzr447z9frk3c58xks3jp0cdl7cv8schqnyjxqlv967g9"; depends=[]; }; profr = derive2 { name="profr"; version="0.3.1"; sha256="1w06mm89apggy6wc273b2nsp95smajr8sf3dwshykivv7mhkxs5d"; depends=[plyr stringr]; }; proftools = derive2 { name="proftools"; version="0.99-2"; sha256="1vx0270sgx15dl6x3nnx13v5y4c0m18yvrhiycl429zky0jzxfr0"; depends=[]; }; - progenyClust = derive2 { name="progenyClust"; version="1.1"; sha256="0d3p38mb0vg7ymzi751wkdcpkfqzf45li6zsvm8rvma41ky06w63"; depends=[Hmisc]; }; + profvis = derive2 { name="profvis"; version="0.3.3"; sha256="0lj4cr9jkbnvb4876kzkwy8gzrw2flbbwb0gw744f4q0240zybs6"; depends=[htmlwidgets stringr]; }; + progenyClust = derive2 { name="progenyClust"; version="1.2"; sha256="0azp5pvk316s8xbawcqwqfd80fxb4xn8hc6aq87xwksc6fhwp94l"; depends=[Hmisc]; }; prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; - progress = derive2 { name="progress"; version="1.0.2"; sha256="1dpcfvdg1rf0fd4whcn7k09x70s7jhz8p7nqkm9p13b4nhil76sj"; depends=[prettyunits R6]; }; + progress = derive2 { name="progress"; version="1.1.2"; sha256="1fxakchfjr5vj59s9sxynd7crpz97xj42438rmkhkf3rjpyspx59"; depends=[prettyunits R6]; }; proj4 = derive2 { name="proj4"; version="1.0-8"; sha256="06r3lavgixrsa52d1v31laqcbw6fb9xn23akv39hvaib78diglv9"; depends=[]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.1"; sha256="0zrz0rywhmb4n3my9ihf070rpmd3xni59rr4dsl1ahq9lkd97h20"; depends=[rootSolve]; }; propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; }; propagate = derive2 { name="propagate"; version="1.0-4"; sha256="18vyh4i4zlsmggfyd4w0zrznk75m84k08p1qa9crind04n5581j1"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; }; properties = derive2 { name="properties"; version="0.0-8"; sha256="1x7zln1indckl090p9kv40snamkac3b8q45387jdqxajmsallxmb"; depends=[]; }; - proportion = derive2 { name="proportion"; version="1.2.0"; sha256="12f4jddr99bv306m6rdvzc1l1xpl7zgg84ka7b691m4s957faxcv"; depends=[ggplot2 TeachingDemos]; }; + prophet = derive2 { name="prophet"; version="0.1"; sha256="0bpkpl0wpvhlcrk5z0fv7ra7l7yxdkbgzlxp99h88ilnad49hh5d"; depends=[dplyr extraDistr ggplot2 Rcpp rstan scales tidyr zoo]; }; + propr = derive2 { name="propr"; version="2.1.2"; sha256="1qymykn6jgbs7pfnm1and8l87m8wyhqfnr1cx1jd1ghw8avniixl"; depends=[fastcluster ggplot2 Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; - protViz = derive2 { name="protViz"; version="0.2.9"; sha256="0kn2dd3za8mmb6476v3wqnymhihyavw2qsh98i4q3xdiz1g77vql"; depends=[Rcpp]; }; + protViz = derive2 { name="protViz"; version="0.2.28"; sha256="1jnc2picmip1681pw9g9l1p7di65mvr10dybqdl0l9gidchn5p0n"; depends=[Rcpp]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; proteomics = derive2 { name="proteomics"; version="0.2"; sha256="01cd4sb79gcx8gbzl624scvjbwhgcsca1wdvvfkhsv7jfwdd2ry2"; depends=[foreach ggplot2 plyr reshape2]; }; protiq = derive2 { name="protiq"; version="1.2"; sha256="1d5wr9w540a79i57nr0arn5xg7s6jhhy5nrgsk8r3ljidld2s2sa"; depends=[graph mvtnorm RBGL]; }; - proto = derive2 { name="proto"; version="0.3-10"; sha256="03mvzi529y6kjcp9bkpk7zlgpcakb3iz73hca6rpjy14pyzl3nfh"; depends=[]; }; + proto = derive2 { name="proto"; version="1.0.0"; sha256="1l843p8vckjckdhgv37ngv47fga5jzy0n00pmipvp05nnaixk54j"; depends=[]; }; protoclass = derive2 { name="protoclass"; version="1.0"; sha256="17d2m6r1shgb47v8mwdg1a7f5h29m5l7f5m0nsmv0xc90s9cpvk8"; depends=[class]; }; protoclust = derive2 { name="protoclust"; version="1.5"; sha256="03qhqfqdz45s8c1p8c6sqs10i6c2ilx4fz8wkpwas3j78lgylskg"; depends=[]; }; + protolite = derive2 { name="protolite"; version="1.5"; sha256="0x25zcw3ayy0rl0sshd0iisaka25xx0sf6fjzlg26ssqjxhzv2f9"; depends=[jsonlite Rcpp]; }; proton = derive2 { name="proton"; version="1.0"; sha256="1mgaw54is8l6ac1rf8s70rj7kv9xgsfdrlvjz01ggfwg7c6pyr3s"; depends=[digest]; }; prototest = derive2 { name="prototest"; version="1.1"; sha256="0v65abrn73wgwnrrf6gv9f7p0qy12xlk9ishq9lq4qal1wlsrrjs"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; - protr = derive2 { name="protr"; version="1.1-1"; sha256="09iwyfvscz0ajgadfd69hhsnhkaqwpjnly9g6jjrdcqnaj4lw77l"; depends=[]; }; - provenance = derive2 { name="provenance"; version="1.4"; sha256="0kcqa4my4ccbnwp30ir3yxlds8r54kf46s3f0fq7q4dnyajwn4pk"; depends=[MASS]; }; - proxy = derive2 { name="proxy"; version="0.4-15"; sha256="17qnrihxyyyj0lx6hka4mwkgy764ha4jx00a822xjnnbygk81iqv"; depends=[]; }; + protr = derive2 { name="protr"; version="1.2-1"; sha256="08431v94p6c4sw2yqm6jc2v20kdgp5gn8kbl40am875z4a9q7c76"; depends=[]; }; + provenance = derive2 { name="provenance"; version="1.5"; sha256="16hy0wbksa85jvv13ksq9qhsv03vr45qsl0l20b33yapgj358v4z"; depends=[MASS]; }; + proxy = derive2 { name="proxy"; version="0.4-17"; sha256="0bg1fn96qrj8whmnl7c3gv244ksm2ykxxsd0zrmw4lb6465pizl2"; depends=[]; }; prozor = derive2 { name="prozor"; version="0.1.1"; sha256="0yv9yzp8ldn888v2sg62qaq0vjg5xwjq9274x68idrlywzgplfgv"; depends=[doParallel foreach Matrix seqinr]; }; pryr = derive2 { name="pryr"; version="0.1.2"; sha256="1in350a8hxwf580afavasvn3jc7x2p1b7nlwmj1scakfz74vghk5"; depends=[codetools Rcpp stringr]; }; - psData = derive2 { name="psData"; version="0.2"; sha256="0a663giyi0si7pck3zsn0bzl0w1r1g60mp3x8vqzazivccjxc1lf"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; + psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; + psbcGroup = derive2 { name="psbcGroup"; version="1.3"; sha256="02h9ghmnmiyg46mi5c9fyz62psyp0l0rbh0pdvn9y0xyagrj7wln"; depends=[LearnBayes mvtnorm SuppDists]; }; pscl = derive2 { name="pscl"; version="1.4.9"; sha256="15fij6n43hry1plgzrak9vmk9xbb7n4v2frv997bhwxbs6jhhfhf"; depends=[lattice MASS]; }; pscore = derive2 { name="pscore"; version="0.1-2"; sha256="1sfkxs2kv8lq87j3q9ci7j38c7gzfkp2l36lwcdhiidr2nls2x0c"; depends=[ggplot2 lavaan reshape2]; }; psd = derive2 { name="psd"; version="1.0-1"; sha256="1ssda4g98m0bk6gkrb7c6ylfsd2a84fq4yhp472n4k8wd73mkdn6"; depends=[RColorBrewer Rcpp RcppArmadillo signal zoo]; }; - pse = derive2 { name="pse"; version="0.4.5"; sha256="0yy6y3xlhqpm8csslv5g8xbnq168and9qxp3xvcl84kif9p064nh"; depends=[boot Hmisc]; }; + pse = derive2 { name="pse"; version="0.4.6"; sha256="155s9ccns1i1nkfmx8112rx16i94f9kv9bak5gcnmi55r5wj7wmj"; depends=[boot Hmisc]; }; pseudo = derive2 { name="pseudo"; version="1.1"; sha256="0dcx6b892cic47rwzazsbnsicpgyrbdcndr3q5s6z0j1b41lzknd"; depends=[geepack KMsurv]; }; - pseval = derive2 { name="pseval"; version="1.0.0"; sha256="17w98qda2h6as2g02fqv6vvrw8m90zsdcfa0i5ss8c546fzchzxl"; depends=[survival]; }; + pseval = derive2 { name="pseval"; version="1.3.0"; sha256="1iv3fa7ar9i7v9j5axbasmn8l8nvry4zvmb7fd8aql82f22szmbj"; depends=[survival]; }; psgp = derive2 { name="psgp"; version="0.3-6"; sha256="0h9gyadfy0djj32pgwhg8vy2gfn7i7yj5nnsm6pvfypc3k71s2wf"; depends=[automap gstat intamap Rcpp RcppArmadillo]; }; - psidR = derive2 { name="psidR"; version="1.3"; sha256="1jdxbjvc309b1bs81v57kc1g7lgfdz84bfakh9qwh8wgjqbjr06i"; depends=[data_table foreign RCurl SAScii]; }; + psidR = derive2 { name="psidR"; version="1.4"; sha256="1whdjsab5cihlq4gp06xafl3zg7z0cjb4622d23v24igz7kr0ic2"; depends=[data_table foreign RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; pspearman = derive2 { name="pspearman"; version="0.3-0"; sha256="1l5mqga7b5nvm6v9gbl1xsspdqsjqyhhdn4gc4qlz6ld7fqfq6cx"; depends=[]; }; pspline = derive2 { name="pspline"; version="1.0-17"; sha256="1n3mhj6q7a1v2k8xkbwji27dihcy3845wp50sx14hy4nbay5kf1r"; depends=[]; }; pssm = derive2 { name="pssm"; version="1.0"; sha256="1af5zvznh04vz5psbmq3xxclm2zh4gl4gxi1ps6aqmiqjpm57dwq"; depends=[abind MASS MHadaptive numDeriv]; }; + pstest = derive2 { name="pstest"; version="0.1.1"; sha256="0k8413ilpbz23v210wz80mli7ajpc8p7y4pbn1za371qw04b81c5"; depends=[harvestr]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; - psych = derive2 { name="psych"; version="1.5.8"; sha256="0bdc49kqbv0yw68rhhgn9by3rqcc9bdg28hdn6wazrg8qvgc3c5h"; depends=[mnormt]; }; + psych = derive2 { name="psych"; version="1.6.12"; sha256="0ijz9gcc52byzmrw4iz976lgayp1wmn5b9v36bras14fwlwri0ky"; depends=[foreign mnormt]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-3"; sha256="15lz6rh3101pxsam07zlgiryyzmf8m16mxnh1fsgdnz8bw0li9g7"; depends=[flexmix Formula lattice modeltools psychotools]; }; - psychotools = derive2 { name="psychotools"; version="0.4-0"; sha256="17qwlxj00i0aqwf39hwr6mmxa6jy0j6dxfrp9p1xskbgi5cnvslk"; depends=[]; }; - psychotree = derive2 { name="psychotree"; version="0.15-0"; sha256="08mq4gssrhydn106zm6xxwb1kk43hdzw6jqclx1ya0g8xfri2rrd"; depends=[Formula partykit psychotools]; }; + psychotools = derive2 { name="psychotools"; version="0.4-2"; sha256="04p5yb39c8j28q6brqsrw0dr1zvgpyzb7008v2kk3d5sncgl4dd0"; depends=[]; }; + psychotree = derive2 { name="psychotree"; version="0.15-1"; sha256="1awavyzblh4s0v15kv52sq5dpalg5p0fp7ih46jxppm1srdxsz41"; depends=[Formula partykit psychotools]; }; psyphy = derive2 { name="psyphy"; version="0.1-9"; sha256="1ndc6sy662wj2qfx7r97crlqjd8fdkfvfy59qmf34bcbzbg33riz"; depends=[]; }; - psytabs = derive2 { name="psytabs"; version="0.5"; sha256="0jcsv771ndf0fv76982rbv099ii4l55a8bj1mhgr54838ins0gg7"; depends=[lavaan mokken plyr psych R2HTML rtf semTools]; }; + psytabs = derive2 { name="psytabs"; version="1.0"; sha256="0dgp5h0jxmqbkkjvd39w1ds9hcggd27fc7pfarwa3iivphf35dim"; depends=[lavaan mokken plyr psych R2HTML rtf]; }; + ptest = derive2 { name="ptest"; version="1.0-8"; sha256="1d30a23yknf7xgqj8adgr36pnh9dpffl1v5fq682f26fk3ss30qp"; depends=[quantreg]; }; ptinpoly = derive2 { name="ptinpoly"; version="2.4"; sha256="1jbj8z7lqg7w1mqdh230qjaydx2yb6ffgkc39k7dx8xl30g00i5b"; depends=[misc3d]; }; + ptstem = derive2 { name="ptstem"; version="0.0.3"; sha256="0dasfqkrd5dkqr1wbg56qrpkyjcb0lcdfcgz5mbxbhs478gf0nwj"; depends=[dplyr hunspell magrittr rslp SnowballC stringr tidyr tokenizers]; }; ptw = derive2 { name="ptw"; version="1.9-11"; sha256="0vh5xv26l27pbx1g9xrj4vcv2bv75cjxs3zf5zcalrnga2lhbdjw"; depends=[nloptr]; }; + ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; - pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.5"; sha256="0993sx2zhrjl9maqrapl3hmy4g4gfm0m1x1vasi4rfdb5rqk5387"; depends=[boot R2HTML RCurl XML]; }; - pubprint = derive2 { name="pubprint"; version="0.1.1"; sha256="0zfbl5xmn0f5dwh8wanvnwfdswjjv9vjnhkfjlsymmwchkxm6b1j"; depends=[stringr]; }; - pullword = derive2 { name="pullword"; version="0.1"; sha256="1mxv63q2nfnhxcn8m17d40w792l1i7diykg6h0i42pj0rsa4ww36"; depends=[RCurl]; }; - pumilioR = derive2 { name="pumilioR"; version="1.3"; sha256="1zmcdp978p73bh9fdshxlrzgfg18j007xgxgr439rq90bwiwva6j"; depends=[RCurl XML]; }; - purge = derive2 { name="purge"; version="0.2.0"; sha256="1kv65as811x53jwg8b26cf9mhhicyn8ncnlsbd9zc0qlg61h00q2"; depends=[]; }; - purrr = derive2 { name="purrr"; version="0.2.1"; sha256="01pms115c0jjb5gsm1l3bxj116cqm8g3zkgn020l384nbmdafzsr"; depends=[BH dplyr lazyeval magrittr Rcpp]; }; - pushoverr = derive2 { name="pushoverr"; version="0.1.4"; sha256="1qa7cajgri3dwlvbpwn244m92n3q3apl4m5420mzsa9ngnmm8hj1"; depends=[httr]; }; - pvar = derive2 { name="pvar"; version="2.2"; sha256="1f58czx14shd02ijyxhn46yrvfh44wrpifja8cjv522gbkrcr7yf"; depends=[Rcpp]; }; + pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.8"; sha256="0vr7r63i7xq6iqik4zdxjf78pfmsppnp4d9lmc6p1c19l9fcgljy"; depends=[boot R2HTML RCurl XML]; }; + pubprint = derive2 { name="pubprint"; version="0.2.1"; sha256="0lcav93i4lw0j491q8ga47iyski2kvmqvppq0jwa3144zfb3hnic"; depends=[stringr]; }; + pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; + pulsar = derive2 { name="pulsar"; version="0.2.5"; sha256="1qmyhj32dygnvqvjysvlhlxv9y8lyfnm8hzaycmh8g3lhymk2k9c"; depends=[Matrix]; }; + pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; }; + purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; + purrr = derive2 { name="purrr"; version="0.2.2"; sha256="0lss8q733nv7s154wargm6vnxq55qygnxakib8xdj4jv0y86sxc3"; depends=[BH dplyr lazyeval magrittr Rcpp]; }; + pushoverr = derive2 { name="pushoverr"; version="1.0.0"; sha256="1zazrx0szx21ymn7zlkfqkhid0ar8jblnpnf5nycj0p7dbh6d0bd"; depends=[assertthat httr]; }; + pvar = derive2 { name="pvar"; version="2.2.2"; sha256="0a84nap9rwlfvhi4yj6mh7wrmzsi06w1zpmshw84lkm2h2ch02gy"; depends=[Rcpp]; }; pvclass = derive2 { name="pvclass"; version="1.3"; sha256="1mlzvcbv1zvciz3hp01pwwanq3q8bapgn2dl90syhj15q5pzb4f7"; depends=[Matrix]; }; pvclust = derive2 { name="pvclust"; version="2.0-0"; sha256="0hfpf257k5f1w59m0zq6sk0gaamflc3ldkw6qzbpyc4j94hiaihs"; depends=[]; }; - pvrank = derive2 { name="pvrank"; version="1.1"; sha256="12yqnhh1y7sz3pb40736vrhhyza12h8iffjm7f9mimnjzpmi5k8i"; depends=[EnvStats Rmpfr]; }; + pvrank = derive2 { name="pvrank"; version="1.1.1"; sha256="07pk7xvvg51i30kzf0cyj6qa38gmdf32c2c2ljbhp95ldk4j07mi"; depends=[EnvStats Rmpfr]; }; pvsR = derive2 { name="pvsR"; version="0.3"; sha256="1ijmqlcsc8z0aphdd3j37ci8yqsy50wnr2fwn7h8fxbyd12ax2nj"; depends=[httr nnet XML]; }; pweight = derive2 { name="pweight"; version="0.0.1"; sha256="0pxxfrap1bmnhbfbmkddfbqwkpw42hq37s0y26zmkxqlx4wblira"; depends=[qqman]; }; - pwr = derive2 { name="pwr"; version="1.1-3"; sha256="0ng0n5qn9im9fdpyv2i2g80kzfa7dk3knfjf4xdpypfdw2gjrf02"; depends=[]; }; + pwr = derive2 { name="pwr"; version="1.2-0"; sha256="1zpyd8ij93w0c27v4i68y869sj8hw30prppaxq0iprgf3d72qf6r"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; - pwt8 = derive2 { name="pwt8"; version="8.1-0"; sha256="0jvskkn3c4m2lfxm9ivm8g96kcd7ynlmjpjqbrd6sqivas0z46r2"; depends=[]; }; - pxR = derive2 { name="pxR"; version="0.40.0"; sha256="08s62kzdgak7mjzyhd32qn93q5l7sj01vhsk7fjg9nxjvm78xxka"; depends=[plyr reshape2 RJSONIO stringr]; }; - pxweb = derive2 { name="pxweb"; version="0.6.0"; sha256="0jxw70wm6rla2v4k6aqzbj6kmxbdj8rqhshmsgmm9vqhpwj2mvkd"; depends=[data_table httr plyr RJSONIO stringr]; }; + pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; + pwt9 = derive2 { name="pwt9"; version="9.0-0"; sha256="1y8zildqnagrp8vf6d8ips0896yp0qcvwy600yv1bqdnglvmn62b"; depends=[]; }; + pxR = derive2 { name="pxR"; version="0.42.2"; sha256="1q1xwsrs1ch1a1d1clz6sl7vnsyz5wjqivczk5n5d772y4w60bz5"; depends=[plyr reshape2 RJSONIO stringr]; }; + pxweb = derive2 { name="pxweb"; version="0.6.3"; sha256="106nb0a3v295cam8ixhdwpgjhwq8p71c2z5c49s6xnqwmf6rbd0h"; depends=[data_table httr plyr RJSONIO stringr]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyramid = derive2 { name="pyramid"; version="1.4"; sha256="0hh0hmckicl0r2r9zlf693j65jr9jgmiz643j2asp57nbs99lgxz"; depends=[]; }; - pystr = derive2 { name="pystr"; version="1.0.0"; sha256="1my0prvil8l2lqc9x8qi0j1zfzxl0ism5v2581himp5n5bcv8gkk"; depends=[]; }; + pystr = derive2 { name="pystr"; version="2.0.0"; sha256="08a20ii7h97qvyzqndbf3rdmnyr04g8h9lrs6qw193p1p41dl94w"; depends=[Rcpp]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; qPCR_CT = derive2 { name="qPCR.CT"; version="1.1"; sha256="19j41fsd2m7p2nxi2h2mj43rjxx6sz2jpf4sk0bfvl1gyj0iz3hi"; depends=[RColorBrewer]; }; qVarSel = derive2 { name="qVarSel"; version="1.0"; sha256="13x2hnqjsm0ifzmqkkl9ilhykrh80q04lhlkkp06hkysmh5w9rkx"; depends=[lpSolveAPI Rcpp]; }; qap = derive2 { name="qap"; version="0.1-0"; sha256="0fc6c3pzlm79nqs9qkngs8m0y8y9syhgilfsav9bbi6ylfhlmdh0"; depends=[]; }; + qat = derive2 { name="qat"; version="0.74"; sha256="04n1jnbkf9dzafjh1n5d4q9p7hvyhnr63nmgl51jqxcf3nan5rlx"; depends=[boot fields gdata gplots moments ncdf4 XML]; }; qcc = derive2 { name="qcc"; version="2.6"; sha256="0bsdgpsqvkz2w1qanxwx8kvrpkpzs9jgw8ml2lyqhmhqbxyg125r"; depends=[MASS]; }; qclust = derive2 { name="qclust"; version="1.0"; sha256="0cxkk4lybpawyqmy5j6kkpgm0zy0gyn3brc1mf9jv8gmkl941cp3"; depends=[mclust mvtnorm]; }; - qcr = derive2 { name="qcr"; version="0.1-18"; sha256="16dfda3rwivsdhp7j5izzbk2rzwfabfmxgpq4kjc4h7r90n2vly2"; depends=[qcc]; }; - qdap = derive2 { name="qdap"; version="2.2.4"; sha256="193jzm87qb4ivs325xg6wnrm19izdl06hlmkcp3m2bxp9wnmdqs1"; depends=[chron dplyr gdata gender ggplot2 gridExtra igraph NLP openNLP plotrix qdapDictionaries qdapRegex qdapTools RColorBrewer RCurl reports reshape2 scales stringdist tidyr tm venneuler wordcloud xlsx XML]; }; + qcr = derive2 { name="qcr"; version="1.0"; sha256="1251naica44kccmikyzdi3ncxfmvyqbc4qspfqnc0w54cqpsy5rw"; depends=[fda_usc MASS mvtnorm qcc qualityTools]; }; + qdap = derive2 { name="qdap"; version="2.2.5"; sha256="13isxmi9vknl5c71434r16j301i86zpbzcqch8hiay51x3wbf2f0"; depends=[chron dplyr gdata gender ggplot2 gridExtra igraph NLP openNLP plotrix qdapDictionaries qdapRegex qdapTools RColorBrewer RCurl reports reshape2 scales stringdist tidyr tm venneuler wordcloud xlsx XML]; }; qdapDictionaries = derive2 { name="qdapDictionaries"; version="1.0.6"; sha256="1icivvsi33494ycd7vfqm9zx2g2rc1m3dygs3bi0ndi798z1cvx2"; depends=[]; }; qdapRegex = derive2 { name="qdapRegex"; version="0.6.0"; sha256="0k6n3zr07ccr9xlmkyg6m0pp7plh91066b61zrn7jphgs0d31c0a"; depends=[stringi]; }; qdapTools = derive2 { name="qdapTools"; version="1.3.1"; sha256="0sfzqmds888r599mwm7j0qjsqfv6z59p4apmmg36hsyaxmw51233"; depends=[chron data_table RCurl XML]; }; qdm = derive2 { name="qdm"; version="0.1-0"; sha256="0cfxyy8s5zfb7867f9xv9scq9blq2qnw68x66m7y7nqlrrff5xdr"; depends=[]; }; - qgraph = derive2 { name="qgraph"; version="1.3.2"; sha256="0bziwpdqgx1pmj61jn7ydri0zfmphf77lxhgm873cllb4czgrl74"; depends=[colorspace corpcor d3Network ellipse fdrtool ggm ggplot2 glasso gtools Hmisc huge igraph jpeg lavaan Matrix plyr png psych reshape2 sem sna]; }; + qfasar = derive2 { name="qfasar"; version="1.2.0"; sha256="067wnwwz8s0yxig13wrjq37w62kf8p5pa8my5lfpc1ik1b7iysby"; depends=[Rsolnp]; }; + qgraph = derive2 { name="qgraph"; version="1.4.2"; sha256="1pp3dwrmp7j4rv0djbypnwjb26gji5fhqw4iwqbnxyi86m47z7z7"; depends=[colorspace corpcor d3Network ellipse fdrtool ggm ggplot2 glasso gtools Hmisc huge igraph jpeg lavaan Matrix plyr png psych reshape2 sem sna]; }; qgtools = derive2 { name="qgtools"; version="1.0"; sha256="0irqfaj2qqx7n1jfc0kmfpgzqrhwwlj0qizsmya94zk9d27bcpn5"; depends=[MASS Matrix]; }; - qicharts = derive2 { name="qicharts"; version="0.5.0"; sha256="09wxw995hxfb8235pi532q3gclmyidh8m6arfszyrd6hbkf0bjv5"; depends=[ggplot2 ggrepel lattice latticeExtra scales]; }; + qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; + qicharts = derive2 { name="qicharts"; version="0.5.3"; sha256="1mqlj8350i7llp76qhpzzisd6vryrnx9wmdazj7xbdg5666qdz45"; depends=[ggplot2 ggrepel lattice latticeExtra scales]; }; qiimer = derive2 { name="qiimer"; version="0.9.4"; sha256="0argspi9pin2gjsg0qkl28hj3bw8svfab1cy410zlq76qdnmg7df"; depends=[pheatmap]; }; + qiitr = derive2 { name="qiitr"; version="0.1.0"; sha256="1p0mcwgzvbib20l05wrnshkqx99vwr69dgy15dfwp75skyy5l797"; depends=[httr jsonlite purrr rstudioapi]; }; qlcData = derive2 { name="qlcData"; version="0.1.0"; sha256="00xfr7dywvadyhs2z32za06fzdzmm20sn31grin0b3xw5qndai0f"; depends=[stringi yaml]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.5"; sha256="0fm49iydbjp264h9mkk8qfblbvg4l3bfcnphxyhcv3n27m0w44sf"; depends=[Matrix slam]; }; qlcVisualize = derive2 { name="qlcVisualize"; version="0.1.0"; sha256="13rc4z7rz7vngrkxq09flhszvcbg6i7drdkdp8kmvgcxf0im6lv0"; depends=[alphahull fields mapdata mapplots maps maptools MASS qlcMatrix raster seriation sp spatstat]; }; - qmap = derive2 { name="qmap"; version="1.0-3"; sha256="1c7qvmd5whi446nzssqvhz1j2mpx22nlzzdrcql84v18ry0dr18m"; depends=[fitdistrplus]; }; - qmethod = derive2 { name="qmethod"; version="1.4.1"; sha256="0m52xq903v91mw2aqqnvqivlgs39zmcy274ph5zgj3gsz71sq1l4"; depends=[digest GPArotation knitr MCMCpack psych xtable]; }; + qmap = derive2 { name="qmap"; version="1.0-4"; sha256="02xvq1mw83gln7phacbi3vhkvb100crggbldv13mhwq3wjnmg5k2"; depends=[fitdistrplus]; }; + qmethod = derive2 { name="qmethod"; version="1.5"; sha256="1j2i3m55vvs6l9fc8sdnp84a5yndcihz8sz49a7gd6sarr55ily4"; depends=[digest GPArotation knitr psych xtable]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; qpcR = derive2 { name="qpcR"; version="1.4-0"; sha256="029qhncfiicb3picay5yd42g6qi0x981r6mgd67vdx71cac9fp59"; depends=[MASS Matrix minpack_lm rgl robustbase]; }; qqman = derive2 { name="qqman"; version="0.1.2"; sha256="024ln79hig5ggcyc3466r6y6zx2hwy2698x65cha5zpm51kq1abs"; depends=[]; }; qqtest = derive2 { name="qqtest"; version="1.1.1"; sha256="08vfpbrgvyhv1w0gqmys9zkhfxh85sk74ig5fn12ma2p87zv7r5l"; depends=[robust]; }; + qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="1.1"; sha256="1yg9ph6jy0sn4d82vn4v7yy3mqczbnzsq8qqp9dw38vh2456rmf2"; depends=[ghyp matrixcalc mvtnorm nlme psych quantreg]; }; - qrNLMM = derive2 { name="qrNLMM"; version="1.0"; sha256="0vlinc3bggapff29dyz14vn122gy6aq3rp38v2bpnxfkbpj10lvy"; depends=[ald ghyp matrixcalc mvtnorm psych quantreg]; }; + qrNLMM = derive2 { name="qrNLMM"; version="1.3"; sha256="046xzzyrjaqa8sa7pxf4mhi1q5pdhvsn5z8gid0cypb0z140ia85"; depends=[ald ghyp matrixcalc mvtnorm psych quantreg]; }; qrage = derive2 { name="qrage"; version="1.0"; sha256="00j74bnkcpp0h8v44jwzj67q9aaw47ajc2fvgr6dckj9rymydinl"; depends=[htmlwidgets]; }; - qrcm = derive2 { name="qrcm"; version="1.0"; sha256="0xjxb2z1h63azbs7gqvqf4a2sk9syzjqkfrvfdcmliv2bv7zf70l"; depends=[pch survival]; }; + qrcm = derive2 { name="qrcm"; version="2.0"; sha256="09awa82qvxhdif9g6w36d89wyhfm55z39dw063lasa7pp7dd3gcl"; depends=[pch survival]; }; qrcode = derive2 { name="qrcode"; version="0.1.1"; sha256="12j0db8vidlgkp0dcjyrw5mhhvazl7v7gpn9wsf2m0qnz1rm4igq"; depends=[R_utils stringr]; }; + qrencoder = derive2 { name="qrencoder"; version="0.1.0"; sha256="1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8"; depends=[base64enc png raster Rcpp]; }; qrfactor = derive2 { name="qrfactor"; version="1.4"; sha256="0f02lh8zrc36slwqy11x03yzfdy94p1lk5jar9h5cwa1dvi5k8gm"; depends=[cluster maptools mgraph mvoutlier pvclust]; }; qrjoint = derive2 { name="qrjoint"; version="1.0-0"; sha256="18jmxb5wv16gy4vf0cgp4x885s53i3z3qmc46bdr4md513mc980w"; depends=[coda kernlab Matrix quantreg]; }; - qrmtools = derive2 { name="qrmtools"; version="0.0-5"; sha256="0p245mh7qwv1fm9wi7wk2jm9pdy7r6jkhnqvcpzf6cnhcl0s6hs5"; depends=[Quandl quantmod zoo]; }; - qrng = derive2 { name="qrng"; version="0.0-2"; sha256="0rs4dggvrlc3bi0wgkjw8lhv4b3jpckcfkqzsaz0j46kf6vfgfw1"; depends=[]; }; + qrmdata = derive2 { name="qrmdata"; version="2016-01-03-1"; sha256="192dcsmvl3xbzlk658cfp2sk5fkgbjhjd4g1mrcs8s63hmzbwdzc"; depends=[xts]; }; + qrmtools = derive2 { name="qrmtools"; version="0.0-6"; sha256="14127svars3f7682mmbmqy0m51xs6syzcrki1mpjf9j1qv2s3jhf"; depends=[lattice Quandl quantmod rugarch xts zoo]; }; + qrng = derive2 { name="qrng"; version="0.0-3"; sha256="0xdhmcqvgjmrf4c72x76yz5kp0jiysy8q6f67lix1h4mvzr4q2qd"; depends=[]; }; qrnn = derive2 { name="qrnn"; version="1.1.3"; sha256="0phbazi47pzhvg7k3az958rk5dv7nk2wvbxqsanppxsvyxl0ykwf"; depends=[]; }; qtbase = derive2 { name="qtbase"; version="1.0.11"; sha256="01fx8yabvk2rsb0mdx9f59a9qf981sl88s56iy58w5dd6r2ag6gc"; depends=[]; }; qte = derive2 { name="qte"; version="1.0.1"; sha256="15y6n0c9jinfz7hmm107palgy8fl15bc71gw0bcd3bawpydkrq2w"; depends=[]; }; - qtl = derive2 { name="qtl"; version="1.39-5"; sha256="1grwgvyv7x0dgay1858bg7qf4wk47gpnq7qkqpcda9cn0h970d6f"; depends=[]; }; + qtl = derive2 { name="qtl"; version="1.40-8"; sha256="05bj1x2ry0i7yqiydlswb3d2h4pxg70z8w1072az1mrv1m54k8sp"; depends=[]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; - qtlbook = derive2 { name="qtlbook"; version="0.18-3"; sha256="0b0kv5nipdavify4vslwhq9p7nmhwk71q3xmnkj66b780605mvr6"; depends=[qtl]; }; + qtlbook = derive2 { name="qtlbook"; version="0.18-5"; sha256="0qvfi8q92n9pa3zbinkk54404m0awhxla9ccflczgaq0vij2n7wf"; depends=[qtl]; }; qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; }; - qtlcharts = derive2 { name="qtlcharts"; version="0.5-25"; sha256="132v2cqi23m1pb7yz7859snsxjj7dmv6gpv5p9lzb5dpa2n8aha6"; depends=[htmlwidgets jsonlite qtl]; }; + qtlcharts = derive2 { name="qtlcharts"; version="0.7-8"; sha256="144f2v97d60z381cnwmbpizig548cw29cqz5csqrk3vrr7j59l99"; depends=[htmlwidgets qtl]; }; qtlhot = derive2 { name="qtlhot"; version="0.9.0"; sha256="1043rksqqzgmr7q03j18wxgm706prqxq9ki9b9p2dxvc62vfcfih"; depends=[corpcor lattice mnormt qtl]; }; qtlmt = derive2 { name="qtlmt"; version="0.1-4"; sha256="1kx4iajhnjilciz9vda0s1mxqxa0h69vm3gpwdpbghgc5cj8d8kh"; depends=[]; }; qtlnet = derive2 { name="qtlnet"; version="1.3.6"; sha256="044a2p3mpp203kb85s2fr3qiyypm461lrzxkfi0hnzq44qqba169"; depends=[graph igraph pcalg qtl sem]; }; qtpaint = derive2 { name="qtpaint"; version="0.9.1"; sha256="08x7qcxwkaclwv1p4s9a5k95x35hzp69whiihkakjv5blm83m3g9"; depends=[qtbase]; }; qtutils = derive2 { name="qtutils"; version="0.1-3"; sha256="018k9v3mab1mfcjh4mv1a1iish50fwdhb51mqn17k6fyrrrv7vs5"; depends=[qtbase]; }; quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; + quadmesh = derive2 { name="quadmesh"; version="0.1.0"; sha256="1k1midhszmi843krv9sdwbyhjmffgps0xx9aigkp7yw7mpif07vx"; depends=[dplyr raster]; }; quadprog = derive2 { name="quadprog"; version="1.5-5"; sha256="0jg3r6abmhp8r9vkbhpx9ldjfw6vyl1m4c5vwlyjhk1mi03656fr"; depends=[]; }; quadrupen = derive2 { name="quadrupen"; version="0.2-4"; sha256="0gs565zi5qkccr9f65smvzgq2d97p7i5inksp2492bjvqhsbagxj"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; }; qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; qualV = derive2 { name="qualV"; version="0.3-2"; sha256="16pjn2la4da9466rafl5drlzx2rcf3vy68b5wz27aacyr15nvdcb"; depends=[KernSmooth]; }; qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; }; + qualpalr = derive2 { name="qualpalr"; version="0.3.1"; sha256="0qfdhzlr4l68a0pwvc58kdh0n5hj7lx7vjkqrq75nbz2b2ycksd3"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; + qualtRics = derive2 { name="qualtRics"; version="0.3"; sha256="1w2rbp3wxxp7yazf00wdjzm4d632n5iwdfcq1fsam5h0srrn18bz"; depends=[httr jsonlite stringr XML]; }; qualvar = derive2 { name="qualvar"; version="0.1.0"; sha256="07vpq5nyh40y1sq1fsg97z7bbardqakq6bx635v42pv00480h9sh"; depends=[]; }; - quantable = derive2 { name="quantable"; version="0.1"; sha256="0q1m971fk9i2qdyps745g89x34anw0g2hxqf5p8ggfvvr32k635r"; depends=[gplots RColorBrewer scales]; }; + quantable = derive2 { name="quantable"; version="0.2.2"; sha256="179bqqrga8mpigchfmhf11sc75frhd9nd6yqclz85lnd6gl16yd7"; depends=[caret e1071 gplots Matrix pROC RColorBrewer scales]; }; quantchem = derive2 { name="quantchem"; version="0.13"; sha256="1ga5xa7lsk04flfp1syjzpnvj3i2ypzh1m49vq1xkdwpm6axdy8n"; depends=[MASS outliers]; }; - quanteda = derive2 { name="quanteda"; version="0.9.4"; sha256="1mmhs4f2ps6fa66pszmbj828mi5ypaa8nlwbw5fv0kh0vqfy83kf"; depends=[ca data_table Matrix proxy Rcpp RcppArmadillo SnowballC stringi wordcloud]; }; - quantification = derive2 { name="quantification"; version="0.1.0"; sha256="0987389rr21fl3khgd3a1yq5821hljwm0xlyxgjy1km5hj81diap"; depends=[car]; }; + quanteda = derive2 { name="quanteda"; version="0.9.9-24"; sha256="0wh7b3yj8qlgygy85sl98pf0inv9vxkd32k56k97bdiajz61cbmk"; depends=[ca data_table fastmatch ggplot2 Matrix proxy Rcpp RcppArmadillo RcppParallel SnowballC stringi wordcloud yaml]; }; + quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; - quantmod = derive2 { name="quantmod"; version="0.4-5"; sha256="14y8xra36cg5zam2cmxzvkb8n2jafdpc8hhjv9xnwa91basrx267"; depends=[TTR xts zoo]; }; - quantreg = derive2 { name="quantreg"; version="5.21"; sha256="1cx1axadmd768m6hg4hgnnihyphkrxlmj2dg04k91466wypbxh6l"; depends=[Matrix MatrixModels SparseM]; }; - quantregForest = derive2 { name="quantregForest"; version="1.2"; sha256="0bgqdmicz0diffgb6hcqm7zgxckjrp5gpph2hnxsicsv8qfr6jsm"; depends=[randomForest]; }; - quantregGrowth = derive2 { name="quantregGrowth"; version="0.3-1"; sha256="0cm4ac9rn5vhqhi7f5qiilym1vp7x6bglwghw22b70nf9zvcap9h"; depends=[quantreg]; }; - quantspec = derive2 { name="quantspec"; version="1.2-0"; sha256="029k1klbcvwprvjggrm0i1hzpybw05r4bsm0awcyjzzrgd8hdmp9"; depends=[abind quantreg Rcpp snowfall zoo]; }; + quantmod = derive2 { name="quantmod"; version="0.4-7"; sha256="16iqpavdslhb1fdpvnxdd3awq9b0rj16mravg9nq8brqb6z3p2x2"; depends=[TTR xts zoo]; }; + quantreg = derive2 { name="quantreg"; version="5.29"; sha256="098gy8xv9kcl5y0cm93b8chr5sm6crrdxi20bkx9lmwmybl3himv"; depends=[Matrix MatrixModels SparseM]; }; + quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; + quantregForest = derive2 { name="quantregForest"; version="1.3-5"; sha256="0yckbz8bk7zlg787a0q70x5k1y4z1nj4difavimgs4s5ac6nbajd"; depends=[randomForest RColorBrewer]; }; + quantregGrowth = derive2 { name="quantregGrowth"; version="0.3-2"; sha256="1ga3qn8g7r465dlxl8wmvz1vlpq5639kmawancsgkm77f316wpzf"; depends=[quantreg]; }; + quantspec = derive2 { name="quantspec"; version="1.2-1"; sha256="0kvwifdwy3big0lls5h3wcb48v3jvlfp1l0zjd07jnvj43zj3ysd"; depends=[abind quantreg Rcpp snowfall zoo]; }; + quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; questionr = derive2 { name="questionr"; version="0.5"; sha256="1n3qv4ynddhhh0h9n0v21y7dq7mq5rmg0qqh3spxgrj0acrnqzhp"; depends=[classInt highr htmltools miniUI rstudioapi shiny]; }; - queueing = derive2 { name="queueing"; version="0.2.6"; sha256="0w6fnjql9ap5vlhiv6syphrkhnp4qp7f4clw2jn155vqqmj5ii6a"; depends=[]; }; - quickReg = derive2 { name="quickReg"; version="0.0.1"; sha256="0lnbhqx7kf1hc7xa6ikk2khqrngqg22rph9zkj6z8f7zlsbpspxh"; depends=[ggplot2 psych survival]; }; - quickmapr = derive2 { name="quickmapr"; version="0.1.1"; sha256="0wqkn8svpi6m9f04kl0vivg2j9ydhq488a9m36s7br7n4zyvc5vm"; depends=[httr raster rgdal rgeos sp]; }; - quickpsy = derive2 { name="quickpsy"; version="0.1.2"; sha256="0nvx7zcmfpfsr94k0wdmpcyyqjwilx8ciy12l8s22y9psz5ripsz"; depends=[boot DEoptim dplyr ggplot2 MPDiR tidyr]; }; - quint = derive2 { name="quint"; version="1.0"; sha256="19dxrssy4dw7v3s4hhhy6yilbc7zb6pvcnh3mm1z6vv5a1wfr245"; depends=[Formula partykit rpart]; }; + queuecomputer = derive2 { name="queuecomputer"; version="0.6.1"; sha256="171fgmb5xz653fh9lr3p562g5ap9072a546r8kan5b6msmnh6adk"; depends=[dplyr Rcpp RcppArmadillo]; }; + queueing = derive2 { name="queueing"; version="0.2.8"; sha256="08wcb58rp9g85cigm0zn0ba4xgihi4283w3sr4b16lv67sgld4p6"; depends=[]; }; + quhomology = derive2 { name="quhomology"; version="1.1.0"; sha256="0acglmjp4x8f81iysxp8x7v5279p8gdidj308b9spn6xbmqgbr8z"; depends=[MASS numbers]; }; + quickReg = derive2 { name="quickReg"; version="1.0.0"; sha256="0dgs0ja2srivrbzl11d3al45ncnrlx7940sk0h8c6lnnxv7nz77k"; depends=[ggplot2 nortest psych survival]; }; + quickmapr = derive2 { name="quickmapr"; version="0.2.0"; sha256="1hxcq4h1rgdmypn3kgmwppzhacyspcj7iv2sy7s2xx5y69x62hf1"; depends=[httr raster rgdal rgeos sp]; }; + quickpsy = derive2 { name="quickpsy"; version="0.1.4"; sha256="0zvi5g43dj1a3f6nysw9gc9nnhm0z5h6sfka4ggwr14fw6k0gz3l"; depends=[DEoptim dplyr ggplot2 MPDiR]; }; + quint = derive2 { name="quint"; version="1.2.1"; sha256="1d9dnrjnl9cg2yn5snr6x9qr6lf74639j3ymsxpw0wn5c4fm8z46"; depends=[Formula partykit rpart]; }; quipu = derive2 { name="quipu"; version="1.9.0"; sha256="1py1qpbwp2smr5di8b3zmzxxhchfmr5qfhqkdiqig28mcnqcmp5n"; depends=[agricolae pixmap shiny stringr xtable]; }; - qut = derive2 { name="qut"; version="1.0.1"; sha256="174zwwznfrpzzqfigzlr39y5gq6xsb8n3h8w6idx52y6psnag22z"; depends=[glmnet lars Matrix]; }; - qvcalc = derive2 { name="qvcalc"; version="0.8-9"; sha256="1ysbsm65n05vypvvpsbdfbrb60gij50vsmybzi4405g5z2ds1j72"; depends=[]; }; - qwraps2 = derive2 { name="qwraps2"; version="0.1.2"; sha256="1xr3bcigaxb72bk90xv0spd6l4d3l8wlpzvf3gnj2r9rqmr867zv"; depends=[dplyr ggplot2 knitr]; }; - r_jive = derive2 { name="r.jive"; version="1.2"; sha256="16g0r527c90j4xcyj8fjb8nq2n2bxkjl56wb57mkhvvcgy15r55f"; depends=[gplots SpatioTemporal]; }; + qut = derive2 { name="qut"; version="1.1"; sha256="0d9gap5jp69y9r7zip4r1kp79lq2wfrxpjka225pxjgj59rj3xls"; depends=[flare glmnet lars Matrix]; }; + qvcalc = derive2 { name="qvcalc"; version="0.9-0"; sha256="0gccxl6l6ibffxkjzfmh2scm8f3bnqwm1hr7ss7dqshhxw21kd5c"; depends=[]; }; + qwraps2 = derive2 { name="qwraps2"; version="0.2.4"; sha256="18ail1y3kpiiwgkf7zn1acfz1ipz7wbk8pcmlganayr8p9yv7sh2"; depends=[dplyr ggplot2 knitr Rcpp tidyr]; }; + r_jive = derive2 { name="r.jive"; version="1.7"; sha256="051kd6ksan4bw3z9w6p22h0sqn6y6dyadcxkibgyi8pz5xp6qypx"; depends=[gplots SpatioTemporal]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; + r2glmm = derive2 { name="r2glmm"; version="0.1.1"; sha256="0b64kia06n8l88rm63hcb8h8qha5if2h8vm8m4s5fdf5hl34dv02"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; r2lh = derive2 { name="r2lh"; version="0.7"; sha256="1kkyjv9x2klrjnaaw4a16sxdfqmpp9s5mlclzlczlqjypbf2aa6d"; depends=[]; }; r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; }; r4ss = derive2 { name="r4ss"; version="1.24.0"; sha256="1kifzfg2zx6lq2c8qqbhb096z1wgdayhg5qzx5hnkwpn05w5cma3"; depends=[coda corpcor gplots gtools maps pso truncnorm]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.6"; sha256="0ym8p9rq64ig3vlaimk38rmc2h1315bphx7v1rd6g4gypgx4ym15"; depends=[ggplot2 plyr png RCurl reshape2 RJSONIO]; }; - rAmCharts = derive2 { name="rAmCharts"; version="1.1.2"; sha256="1c9mrzi0bd2fpv2jvhabb243k2z36k6cxffgcykxi8f62rpvhmq9"; depends=[data_table htmltools htmlwidgets rlist]; }; + rAmCharts = derive2 { name="rAmCharts"; version="2.1.3"; sha256="0q02x00gvvqzrsl2m9lmmjc2xf3vf718ar0zlqnqn6rnz94lbvv3"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml]; }; rAverage = derive2 { name="rAverage"; version="0.4-13"; sha256="0yfy81p99a3cb31cagxdvby7l2hcc60g3mnfizd9nvgamdmw08sy"; depends=[]; }; rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; }; + rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; }; rBeta2009 = derive2 { name="rBeta2009"; version="1.0"; sha256="0ljzxlndn9ba36lh7s3k4biim2qkh2mw9c0kj22a507qbzw1vgnq"; depends=[]; }; + rCAT = derive2 { name="rCAT"; version="0.1.5"; sha256="03nbhcfgawz0a8h5fr51aqn1n9v7kprwvafxzjb2pb8751rica2d"; depends=[pracma rgdal sp]; }; rCBA = derive2 { name="rCBA"; version="0.0.1"; sha256="0mfd4jn5bcn4kqnfmycm5x7kcvll60dp1nma3l1bfj0v2hybxm5d"; depends=[arules rJava]; }; rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; }; rCUR = derive2 { name="rCUR"; version="1.3"; sha256="1f38xbc5n91k2y88cg0sv1z2p4g5vl7v2k1024f42f7526g2p2lx"; depends=[lattice MASS Matrix]; }; rCarto = derive2 { name="rCarto"; version="0.8"; sha256="08813l4xfahjyn0jv48q8f6sy402n78dqsg01192pxl2dfc2i9ry"; depends=[classInt maptools RColorBrewer]; }; rChoiceDialogs = derive2 { name="rChoiceDialogs"; version="1.0.6"; sha256="0lp8amdalirpsba44aa3r31xnhmi36qb9qf8f8gdxxbarpgprsbi"; depends=[rJava]; }; rClinicalCodes = derive2 { name="rClinicalCodes"; version="1.0.1"; sha256="1p4p8r2n0k8h9xdzbngb95rshjp3376f5lsx228biqmswhpkhvlf"; depends=[RCurl rjson stringr tm XML]; }; - rDEA = derive2 { name="rDEA"; version="1.2-3"; sha256="1xhrgglnidpzqwkvwnwnnpcx23il0jgfp394rsc74pwdsbv1ifz9"; depends=[maxLik slam truncnorm truncreg]; }; - rDNA = derive2 { name="rDNA"; version="1.30.1"; sha256="12h83zirv55sryc1zww97ws8kvsym1z7p7y5d4w43nam8mi3fpcd"; depends=[rJava]; }; + rDEA = derive2 { name="rDEA"; version="1.2-5"; sha256="1wsi2dkq9izvbhdqmd4qk8i277r1j38dk59fcmnxnwqvk6ar6nrb"; depends=[maxLik slam truncnorm truncreg]; }; + rDNA = derive2 { name="rDNA"; version="1.31"; sha256="051000q3wb9bjcwm3v60yfy1gpr6amvciy5sh498kl5vq7nv5wlv"; depends=[rJava]; }; + rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDVR = derive2 { name="rDVR"; version="0.1.1"; sha256="19a4f9k65bd49vkn3sxkjdmcpwyawk7gwmvancvqr745gfgs0wzg"; depends=[RCurl]; }; - rEDM = derive2 { name="rEDM"; version="0.4.7"; sha256="1d1ylm5rmbrrknmc82vlbhqqkl62drs25gwqid4adflpj2gxczhz"; depends=[Rcpp]; }; + rEDM = derive2 { name="rEDM"; version="0.5.4"; sha256="1vhhc1yfswvba6qfff5y9l96g8xjw0szshzs4hd4yxh6rq1bnjlr"; depends=[Rcpp RcppEigen]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; - rFerns = derive2 { name="rFerns"; version="2.0.0"; sha256="0mfwlypakk409p17cmj8q9g99aq8z8gzg54dhpw351ixblvnil98"; depends=[]; }; + rFSA = derive2 { name="rFSA"; version="0.1.0"; sha256="14drlivamb818dgh808h6j81ww1zlwil42whpclz7ayfddna5rg4"; depends=[]; }; + rFTRLProximal = derive2 { name="rFTRLProximal"; version="1.0.0"; sha256="1458gqy2zbaa62vaimawdr1nk0lsgwz1j4pgw21fkw7bskcszz0f"; depends=[data_table FeatureHashing foreach magrittr Matrix Rcpp RcppArmadillo RcppProgress]; }; + rFerns = derive2 { name="rFerns"; version="2.0.2"; sha256="19lwvb9aa115gc6wb5vzhmmhqgq2xxf6y83hw5y6k589prbxfq8y"; depends=[]; }; + rForest = derive2 { name="rForest"; version="0.1"; sha256="1y7gqa1333nvllngy821k655glxkb9p6rbnx9cns7dy0qdqjzx50"; depends=[alphashape3d geometry rgl sp]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGroovy = derive2 { name="rGroovy"; version="1.0"; sha256="03kyw1hv1xmv580cf47gb3fzvjp27j0a93604h5hap981pzibdpy"; depends=[rJava]; }; rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; }; rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; }; + rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-7"; sha256="1j8lc56q20b0qkl20r8mqa6q822rpfphj00dlmj50rgwk02pfc69"; depends=[chopsticks rJava]; }; rJava = derive2 { name="rJava"; version="0.9-8"; sha256="12mxajy300gyi5bsd3fn84nvj83chr8ls0mrh3mm9nhl2h1mxnns"; depends=[]; }; rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; }; + rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; + rLDCP = derive2 { name="rLDCP"; version="1.0.1"; sha256="0ldw6ybyyxhfsxbbjs8qzcf8dmha3q04h6mcxk90q1wlmlanqwf0"; depends=[XML]; }; rLTP = derive2 { name="rLTP"; version="0.1.2"; sha256="1cr0r3v7d09bss16fxls341l71i9wkg91hr2hiyr4cl5fg35zzgb"; depends=[RCurl]; }; - rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.7.6"; sha256="03gdr4swy3dq6vkq4q44sdn7slgjzcqzd2pmhac4bghgzgk3zgj8"; depends=[plyr]; }; + rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.8.3"; sha256="1rc8x6xqygfnr7sb2115g92djsjjjdwk5vssq3q3n9x7jzj878v5"; depends=[plyr]; }; rLiDAR = derive2 { name="rLiDAR"; version="0.1"; sha256="1zm3c3xpxk1ll0cq589k1kf69wgn93qmaqkvpgcjib0ay35q7c7f"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; + rMR = derive2 { name="rMR"; version="1.0.4"; sha256="1md0xkl87qqylwh5zbx9awa5i4f573v4glgaf4k8h5ls4icaaav4"; depends=[biglm]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; - rNOMADS = derive2 { name="rNOMADS"; version="2.2.0"; sha256="0ihrg88rklgn4fa2b7zcs9bxfawhxgxdxlwslkh4ngcz2v72cfnp"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; }; - rPlant = derive2 { name="rPlant"; version="2.12"; sha256="12aclndwijnaw14iqb2q7m5c2zh2bgdpfzmf11sgiwv5680qhdmh"; depends=[RCurl rjson seqinr]; }; + rNOMADS = derive2 { name="rNOMADS"; version="2.3.2"; sha256="1dklyda8xagg643c67ii9hx2lvwkc9xaxlkvigs9dv1bkzbrw9gs"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; }; + rPlant = derive2 { name="rPlant"; version="2.16"; sha256="0bi7p8w6v8gys8rab5f0c11r0rsp14nsf4mmm2bsz8kxfprh6vdp"; depends=[RCurl rjson seqinr]; }; rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.1"; sha256="0yk61ck2br81cd40yvqxrzi9s680ii26wbl0wjdam04dyf0vh1cv"; depends=[mvtnorm ssanv]; }; - rPref = derive2 { name="rPref"; version="0.7"; sha256="005qphrcwnkfi2wmm7ba0swykq17q9ab7c7khqyixb0y9gyrwing"; depends=[dplyr igraph Rcpp RcppParallel]; }; + rPref = derive2 { name="rPref"; version="1.2"; sha256="19b6rycz73rz3nxymb52gfddqsxprkxazwa8pb75vckk13q1cmj0"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rPython = derive2 { name="rPython"; version="0.0-6"; sha256="1aw9jn45mw891cskr51yil60i55xv5x6akjvfdsbb9nwgdwwrqdp"; depends=[RJSONIO]; }; + rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; + rSARP = derive2 { name="rSARP"; version="1.0.0"; sha256="0gg6qs7jgn2qvzdwbz0xyfpfzjwa2dwi0j0hal7glc5qlhrrynwl"; depends=[ggplot2 lattice qcc]; }; rSCA = derive2 { name="rSCA"; version="2.1"; sha256="1lpix8xsjzyhgksmigvqxpv2bvaka0b1q2kcvdyfrfcw713n19rw"; depends=[]; }; rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; }; rSPACE = derive2 { name="rSPACE"; version="1.2.0"; sha256="1nmv8niqc34mipzhny1mlwc9v4kck02ixmm1i25cqdfhsng03dma"; depends=[ggplot2 plyr raster RMark sp tcltk2]; }; rSymPy = derive2 { name="rSymPy"; version="0.2-1.1"; sha256="1mrfpyalrq8b6yicy28jsj0xy7hlawa72imsfhabwd3hrx6ld150"; depends=[rJython]; }; rTableICC = derive2 { name="rTableICC"; version="1.0.3"; sha256="1q7xac9vfnakjp54ccqli42wi8idfb9g9crgbqyg5s726b7z50n7"; depends=[aster partitions]; }; rTensor = derive2 { name="rTensor"; version="1.3"; sha256="0ra34sn4g92r6asrn4la2wbsi2y0hnyx163wwi4v0j6f57bslhdw"; depends=[]; }; - rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.0.0"; sha256="1gbmr3kcv3wv4lmr7171sd76p95nhsa104955yi7y6wd5h0hk1ba"; depends=[choroplethr rvest stringr]; }; + rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; - rYoutheria = derive2 { name="rYoutheria"; version="1.0.0"; sha256="1yj66ars5a8mbv2axl6l5g7wflwz3j4mhwk3iz5w33rfhixixm9l"; depends=[plyr RCurl reshape2 RJSONIO]; }; + rWind = derive2 { name="rWind"; version="0.1.3"; sha256="15a9x1arfc6pfcn6z87mlnnds38zl8nb5b5ix081mssp0s0anm26"; depends=[raster shape]; }; + rYoutheria = derive2 { name="rYoutheria"; version="1.0.3"; sha256="1r63ggy4knwzxnpjkmsn7zwmwfaznm8mmxl7r9ph10wz4sblgygl"; depends=[plyr RCurl reshape2 RJSONIO]; }; race = derive2 { name="race"; version="0.1.59"; sha256="13jprlnngribgvyr7fbg9d36i8qf3cax85n71dl71iv0y24al1cy"; depends=[]; }; radar = derive2 { name="radar"; version="1.0.0"; sha256="1wh5j3cfbj01jx2kbm9ca5cqhbb0vw7ifjn426bllm4lbbd8l273"; depends=[]; }; - radarchart = derive2 { name="radarchart"; version="0.1.2"; sha256="1zhkzc1x411q14drdkhwrivsz818hvqrv1zyvcyq3a3dl65xavqr"; depends=[htmltools htmlwidgets]; }; - radiomics = derive2 { name="radiomics"; version="0.1.1"; sha256="0rw1xvp7nq8h5g4yqqcwrv706zssa0kvkhm6ncdb9y7gmpidhyj5"; depends=[reshape2 spatstat]; }; - radir = derive2 { name="radir"; version="1.0.1"; sha256="1i37ynxl85yzh5pyxykjn64p5qph1w9b1gappmlhql9z04095ryk"; depends=[hermite]; }; + radarchart = derive2 { name="radarchart"; version="0.3.1"; sha256="0gcxnbgj8ja1m4wzhbjy67m6zphf0c5ni9yx7sr7f0abm03ry753"; depends=[htmltools htmlwidgets]; }; + radiant = derive2 { name="radiant"; version="0.6.0"; sha256="037xskigyisr5sgsrr8xbgvqidl775vdw7vllwpsq4akyz9i6amc"; depends=[AlgDesign psych r_import radiant_basics radiant_data radiant_design radiant_model radiant_multivariate shiny]; }; + radiant_basics = derive2 { name="radiant.basics"; version="0.6.0"; sha256="00i78hxafp7s5hpv54frfsjsj690jn5awsj0k4hdaiphiqb4gmmp"; depends=[dplyr ggplot2 gridExtra magrittr psych r_import radiant_data scales shiny tidyr]; }; + radiant_data = derive2 { name="radiant.data"; version="0.6.0"; sha256="1iiby1472p8j2fprryvj0ifl6z7y2hpwhdb10krd3ywxv476z2cd"; depends=[base64enc broom car curl dplyr DT ggplot2 gridExtra jsonlite knitr lubridate magrittr markdown pryr psych r_import readr rmarkdown rstudioapi scales shiny shinyAce tibble tidyr]; }; + radiant_design = derive2 { name="radiant.design"; version="0.6.0"; sha256="0434zn42bkb2q01p63iw7imjkc45agnj909x3bfwm6y2kmgkvga9"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data shiny]; }; + radiant_model = derive2 { name="radiant.model"; version="0.6.0"; sha256="04jnbhmvwfkf80xz2r3mimzdyr1yw80l9sq9pr52vcf7r98j13gq"; depends=[car data_tree DiagrammeR dplyr ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet pryr r_import radiant_basics radiant_data sandwich shiny stringr tidyr yaml]; }; + radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.6.0"; sha256="01gzcvq5xq8ljbxkwx8qxcpd871nd03236fkv1gr5s1bw9lb0z6l"; depends=[car dplyr ggplot2 gridExtra magrittr MASS psych r_import radiant_data scales shiny wordcloud]; }; + radiomics = derive2 { name="radiomics"; version="0.1.2"; sha256="1l9ribgyk0wgr7cy4fh7qp0hwzxcmkir9r2zwb0ha3rqqggd3xj7"; depends=[Rcpp reshape2 spatstat]; }; + radir = derive2 { name="radir"; version="1.0.2"; sha256="09lcq8ax5x5yk3sqx15rvw3vyi8fyfzgs76kxjhf7hcw4qnib46d"; depends=[hermite]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; - rags2ridges = derive2 { name="rags2ridges"; version="2.0"; sha256="0qc93a1bf63iwgmpz9bz62j20p4v77bvbjmy4rqchj7z6h573njd"; depends=[expm fdrtool ggplot2 Hmisc igraph Rcpp RcppArmadillo reshape sfsmisc snowfall]; }; + rags2ridges = derive2 { name="rags2ridges"; version="2.1.1"; sha256="1wma4yikm7aqccldqga96hl2vpagjvmv5gwglj04clcmh9i7cskp"; depends=[expm fdrtool ggplot2 Hmisc igraph Rcpp RcppArmadillo reshape sfsmisc snowfall]; }; + ragt2ridges = derive2 { name="ragt2ridges"; version="0.2.3"; sha256="1ws2drllynmwc4dfd90b7pafc1gpz99g129yjf511ikjzfbl3lra"; depends=[expm fdrtool graph gRbase igraph marray Matrix mvtnorm rags2ridges RBGL Rcpp RcppArmadillo]; }; + ragtop = derive2 { name="ragtop"; version="0.5"; sha256="0h09h9ws9c2d9xc00w4hl000h0kbvq16lz4vgv1w93am8zmsp4wm"; depends=[futile_logger limSolve]; }; + rainbow = derive2 { name="rainbow"; version="3.4"; sha256="09vxdb4j099grnlx10995b74r3h9g1vs8div3nywgnslaj8x7pay"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; }; rainfreq = derive2 { name="rainfreq"; version="0.3"; sha256="0985ck2bglg22gfj7m0hc7kpk0apljsbssf1ci99mgk47yi8fk9v"; depends=[RCurl SDMTools]; }; - ramify = derive2 { name="ramify"; version="0.3.2"; sha256="0fqspa1nlf0969g3lvvwg65zimwfdj5c2bahxvafggn832sb54k9"; depends=[]; }; - ramps = derive2 { name="ramps"; version="0.6-13"; sha256="1y7jaajzbf6d9xwr0rg0qr43l8kncgwbpfy5rpka90g3244v8nwz"; depends=[coda fields maps Matrix nlme]; }; + rakeR = derive2 { name="rakeR"; version="0.1.2"; sha256="064vprqrsing372hhkp6a7jfihbbik2i40i7mp9l79n816szpgm7"; depends=[ipfp]; }; + ramcmc = derive2 { name="ramcmc"; version="0.1.0"; sha256="0s5jgjqkschr64srblppv9lbvhynlpfiy8cy12fywpmnbv8viazq"; depends=[Rcpp RcppArmadillo]; }; + ramidst = derive2 { name="ramidst"; version="0.1.0"; sha256="1q4lvq2c2vj9xrm2p2w2qjsl4qvwcl6y54y68mmbd6cw7wqpffjj"; depends=[rJava]; }; + ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; }; + ramps = derive2 { name="ramps"; version="0.6-14"; sha256="09chbqh13h8b10dlcka07y954ga129lamg0fr38iwj4lqb6a2fvy"; depends=[coda fields maps Matrix nlme]; }; ramsvm = derive2 { name="ramsvm"; version="2.0"; sha256="1q6ag3x1mgkyw8nsxghhk9yrcr0ybwilsx1yzg98bqsmxrrqk17q"; depends=[doParallel foreach]; }; - randNames = derive2 { name="randNames"; version="0.2.1"; sha256="177xdgrikvfcgjag382v5d1j72322ihnbggzxp9ip6p48ib4p3qg"; depends=[dplyr httr jsonlite]; }; + randNames = derive2 { name="randNames"; version="0.2.3"; sha256="0vhzg14yg4c9inzxin8prfzh6nhf8fvbi4hbn122fyqyp5d6f8zi"; depends=[httr jsonlite tibble]; }; randaes = derive2 { name="randaes"; version="0.3"; sha256="14803argy0xdd8mpn4v67gbp90qi2is4x6na9zw7i9pm504xji1x"; depends=[]; }; - random = derive2 { name="random"; version="0.2.5"; sha256="0n96zv3b95msahpzdwfqsd9i9bq2z94flxxm8ghnqb0b75qcsdg0"; depends=[curl]; }; - random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-1"; sha256="1051v7krrawdqnhz9q01rsknp2i7iv82d370q7m9i9d9i8wfnpk5"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; + randgeo = derive2 { name="randgeo"; version="0.1.0"; sha256="1jjblzqm45yxz5pvkg2mhv891vxlw0c3ii8y6gah680g09xgwjxx"; depends=[]; }; + random = derive2 { name="random"; version="0.2.6"; sha256="0sdhagwjlhldb8hn6h4nd1sflzhwkapzybdlb8hzisy3w2ygjn9b"; depends=[curl]; }; + random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-2"; sha256="1ybwfn3hdwisxjn85vqrib1zhk8dcddbarbwjdf1vn27ih3c4h2c"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; randomForest = derive2 { name="randomForest"; version="4.6-12"; sha256="1i43idaihhl6nwqw42v9dqpl6f8z3ykcn2in32lh2755i27jylbf"; depends=[]; }; randomForest_ddR = derive2 { name="randomForest.ddR"; version="0.1.1"; sha256="0q4xjh7qqmd4slxwd1z5mnpn4y3vx1vbn6v060zbd0afibpcw92b"; depends=[ddR Matrix randomForest]; }; - randomForestSRC = derive2 { name="randomForestSRC"; version="2.1.0"; sha256="1x9xlf808gs25wqpa0a7gfxf0fdgf6jgj8237g61s1yx3vninhnn"; depends=[]; }; + randomForestSRC = derive2 { name="randomForestSRC"; version="2.4.1"; sha256="17a59jc8h7bfgz9gpisc144fyas7da1c1lab1x8wasfilgkg08z2"; depends=[]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; - randomLCA = derive2 { name="randomLCA"; version="1.0-6"; sha256="1l343p9a6z2ld3z2kqwldmn3wxf8yvjqr4nfhyjwp4y5d2ic9r11"; depends=[boot fastGHQuad lattice Matrix SciencesPo]; }; - randomNames = derive2 { name="randomNames"; version="0.1-0"; sha256="0v92w0z0dsdp6hhyyq764nlky8vmbs6vcnrna5ls47fj80f9cqa4"; depends=[data_table]; }; + randomLCA = derive2 { name="randomLCA"; version="1.0-10"; sha256="1h1fxymdiycxn90lipzb190xakf7hlbn6nwxsbfwcz8278xkcn4g"; depends=[boot fastGHQuad lattice Matrix]; }; + randomNames = derive2 { name="randomNames"; version="0.4-0"; sha256="0419kjgin5yf58765rc6m8wcbp26yggkiarprzissqaf9sp0sh4p"; depends=[data_table]; }; randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; }; + randomcoloR = derive2 { name="randomcoloR"; version="1.0.0"; sha256="15qgfzwc2cli2gjwzj1pf4h16qciiinihd9ib6ph74jbkpimyh11"; depends=[colorspace stringr V8]; }; randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; randomizeBE = derive2 { name="randomizeBE"; version="0.3-2"; sha256="1mkq1fpr7bwlk01246qy6w175jcc94q8sb3pyjkdr8yms6iqk8i7"; depends=[]; }; - randomizr = derive2 { name="randomizr"; version="0.3.0"; sha256="1zi8rldmgjcjnnx3qcpr555c4g713nh6wrdh5gr77z2qagbljb1i"; depends=[]; }; + randomizeR = derive2 { name="randomizeR"; version="1.3"; sha256="0s62r0fxi0f9jbwldvga2vn06cp0amxjhmqch7d892c4wa7r9fj0"; depends=[ggplot2 plotrix]; }; + randomizr = derive2 { name="randomizr"; version="0.4.1"; sha256="0shj50s88l96d0zl8iv2wdzgrszffi9hgv7hsmvcxh1jm051ipi9"; depends=[]; }; + randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; randtoolbox = derive2 { name="randtoolbox"; version="1.17"; sha256="107kckva43xpqncak8ll4h0mjm8lcks4jpf7dffgw5ggcc77ycrb"; depends=[rngWELL]; }; - rangeBuilder = derive2 { name="rangeBuilder"; version="1.1"; sha256="1a2cjpl3hxynwpzc4rz5g0g5gq2h15jvbcvkdqv59j905rhaikg1"; depends=[alphahull raster rgdal rgeos sp stringi]; }; - rangeMapper = derive2 { name="rangeMapper"; version="0.3-0"; sha256="0r8nf2y4drdfldfr1rv1ll4176w3hzd9qf36glzjdsm0g1fcixba"; depends=[classInt data_table foreach ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; - rangemodelR = derive2 { name="rangemodelR"; version="1.0"; sha256="19wbzrim0mjngdfsrmfidk1csh7fzqv6cwh4hxvjgjl2ps99cank"; depends=[]; }; - ranger = derive2 { name="ranger"; version="0.3.0"; sha256="1vi0wkks5rzn6mc6k2lh0rdbb5awvcfww68kk0wndng45mk7hrq2"; depends=[Rcpp]; }; + rangeBuilder = derive2 { name="rangeBuilder"; version="1.3"; sha256="08v01b0wm5r73yp2qkxxvd8jsxba22rnqsbwwrqrkrm71c68j192"; depends=[alphahull raster rgdal rgeos sp stringi]; }; + rangeMapper = derive2 { name="rangeMapper"; version="0.3-1"; sha256="005r97zwz0czsp543h1g3zrys00s6wdyk0ji9pk7jn625i02cbdk"; depends=[classInt data_table foreach ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; + rangemodelR = derive2 { name="rangemodelR"; version="1.0.1"; sha256="04zv8a4nhin9masvbw1cmbwdkls4wgq81xfw6kg0wdh1hpqjz1z0"; depends=[]; }; + ranger = derive2 { name="ranger"; version="0.6.0"; sha256="1fwqwbi0dnla16x6zj14rf95qr5gmilfmlrwnv7s960h4yiw4n97"; depends=[Rcpp]; }; + rankFD = derive2 { name="rankFD"; version="0.0.1"; sha256="1zb9gxvsmv46mpw5znskhfjxnwkr59hdixcly6i3r78yaqgca0dz"; depends=[coin lattice MASS Matrix]; }; rankdist = derive2 { name="rankdist"; version="1.1.2"; sha256="1nr9nr5nfziia6jykk598hm5ngkfr6yx5mypq34iyfm24877gd3q"; depends=[hash optimx permute Rcpp]; }; - rankhazard = derive2 { name="rankhazard"; version="1.0-2"; sha256="1gx30ak5vjgbgnx920789d38y16rl8w7hbxfk9yb8xjl1azgfaqx"; depends=[survival]; }; - rappdirs = derive2 { name="rappdirs"; version="0.3"; sha256="1yjd91h1knagri5m4djal25p7925162zz5g6005h1fgcvwz3sszd"; depends=[]; }; + rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; + rapiclient = derive2 { name="rapiclient"; version="0.1.2"; sha256="072rlr7z9rj4agkzmy12cz4axh4pajavfd83lpcx2b1lgxpj6ck4"; depends=[httr jsonlite]; }; + rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; + raptr = derive2 { name="raptr"; version="0.0.3"; sha256="1ydk83w1sd60pb0a03938hlgdw87pk40l028cxwa8kzwrzi6gh1j"; depends=[adehabitatHR BH boot doParallel gdalUtils ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp testthat]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; - rasclass = derive2 { name="rasclass"; version="0.2.1"; sha256="04g2sirxrf16xjmyn4zcci757k7sgvsjbg0qjfr5phbr1rssy9qf"; depends=[car e1071 nnet randomForest RSNNS]; }; + rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.2-22"; sha256="0wva7dd7zsclqxk3imkvbi98rxsvd1axr1l1msfcf9r8xrzybshf"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; - raster = derive2 { name="raster"; version="2.5-2"; sha256="0x6rmd4mcvivkisxpjlp7myf8crz58md2ngz6qsz37i8aw1hn3jb"; depends=[Rcpp sp]; }; - rasterVis = derive2 { name="rasterVis"; version="0.37"; sha256="1pfpjrjgcy5d4jzkf7sm427y0b6v0ipxr9p8z9sr6djhzcs3gfn0"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp zoo]; }; + raster = derive2 { name="raster"; version="2.5-8"; sha256="1k34caqj8fab7am44zmp1szk0w15rjc04xz3phzm2l1lg2yjm6a7"; depends=[Rcpp sp]; }; + rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; }; + rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; + rasterVis = derive2 { name="rasterVis"; version="0.41"; sha256="0dsg8ypsxxa7qagy5yjcyqyjqqyy7xgfbmiijr3xbn2n1wp090n9"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; + ratelimitr = derive2 { name="ratelimitr"; version="0.3.7"; sha256="19j43xz1arn8h7pni5797ds7hmcj7llbgaiw514qpwnsp0qx24f6"; depends=[assertthat]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; + ratesci = derive2 { name="ratesci"; version="0.1-0"; sha256="15ar1jx026qn01yk1lnmn40wqkf8ngpjlqiqizi16mxz28rrgr6n"; depends=[]; }; rationalfun = derive2 { name="rationalfun"; version="0.1-0"; sha256="15949vs9pdjz7426zhgqn7y87xzn79ikrpa2vyjnsid1igpyh0mp"; depends=[polynom]; }; rattle = derive2 { name="rattle"; version="4.1.0"; sha256="0ww4bwwvivpk049lpv6k29zxkb0islhwh2qnlrvasgh2b9yig25p"; depends=[magrittr RGtk2 stringi]; }; - rbamtools = derive2 { name="rbamtools"; version="2.14.3"; sha256="1sdnz52vd5gfwc194y6ilrd8dkawv86xcd37100giz1525wf929i"; depends=[]; }; + raw = derive2 { name="raw"; version="0.1.4"; sha256="112fw1si708qrj6r91b1i8cwhxa20amri5838rc5azn6d5b9wcks"; depends=[]; }; + rbamtools = derive2 { name="rbamtools"; version="2.16.0"; sha256="0a3862923wn9mxpbhsq7sxd0q306xnzphsn2p0zxsx1ixw7ksy4j"; depends=[refGenome]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; - rbhl = derive2 { name="rbhl"; version="0.2.0"; sha256="169nrbpi9ijzb5qk1b1dwjayfnsjq8r67dc7bis9aicyp4hpjyzw"; depends=[httr jsonlite plyr XML]; }; + rbgm = derive2 { name="rbgm"; version="0.0.4"; sha256="0sqi42vz3fdgp7gpa4jjh8dxz3iwwagw9in70jpz6fc18ivizkp1"; depends=[dplyr geosphere raster sp tibble]; }; + rbhl = derive2 { name="rbhl"; version="0.3.0"; sha256="0ig9s0xnwkri1sxqaa8fax68v22bp4vl9rv4wq1gd3gpgl2c0frc"; depends=[httr jsonlite plyr tibble xml2]; }; + rbi = derive2 { name="rbi"; version="0.7.0"; sha256="0j5h5m4xshs5xizzb3fxlzjgp6nkyz0hbh0yhky1pj815n66ww9m"; depends=[data_table ncdf4 reshape2]; }; rbiouml = derive2 { name="rbiouml"; version="1.7"; sha256="0bk0pvx0rfk74s7lbr8lc664yplfky94j1ym098w029045k233pi"; depends=[RCurl RJSONIO]; }; - rbison = derive2 { name="rbison"; version="0.4.8"; sha256="10kwlf7vrzw2rhsdwih5lcvjw0bz0n88mp74ayc9331d8j226214"; depends=[dplyr ggplot2 httr jsonlite mapproj plyr sp]; }; + rbison = derive2 { name="rbison"; version="0.5.0"; sha256="01j8jnfhikaggsvcnxamchvgabp8rbpmi1q18s1bcn5vc55fi12f"; depends=[dplyr ggplot2 httr jsonlite mapproj plyr sp]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rbmn = derive2 { name="rbmn"; version="0.9-2"; sha256="1zy832y399cmfmhpyfh7vfd293fylf1ylmp8w8krkmzkmyfa80f2"; depends=[MASS]; }; - rbokeh = derive2 { name="rbokeh"; version="0.4.2"; sha256="05v3ry6mhbwl903rn2941qam2pvfkr0fnp7qzhgn9z12dxjmpl8i"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; + rbokeh = derive2 { name="rbokeh"; version="0.5.0"; sha256="1lpbph6bhh9rf5rs0ivp8dchx8i8ylz5nr7xc2xv9bnwlwj35729"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; rbugs = derive2 { name="rbugs"; version="0.5-9"; sha256="1kvn7x931gjpxymrz0bv50k69s1x1x9mv34vkz54sdkmi08rgb3y"; depends=[]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; - rcanvec = derive2 { name="rcanvec"; version="0.1.4"; sha256="0mnrnwxk14i9yarrq4vhflkhqfdqz8vpn2z10c3rlyrx849xh7zi"; depends=[rgdal sp]; }; - rcbalance = derive2 { name="rcbalance"; version="1.8.2"; sha256="0jd6brswpm2ymvk3z72kzfg2axd4wan70dbcgvldjjaz2mvhz56z"; depends=[MASS plyr]; }; + rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; + rcbalance = derive2 { name="rcbalance"; version="1.8.3"; sha256="0bksyjbxdllgaqkhpz29isslqkpp3y4xl3wqhpjy881lhlw40y1j"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.2"; sha256="0izvxbkjmhyp8jz4mlwa5grdgcd8q9pdc3jwrccby0xz0f5gw2x0"; depends=[MASS plyr]; }; - rcdd = derive2 { name="rcdd"; version="1.1-9"; sha256="1mwg9prf7196b7r262ggdqsfq1i7czm1a0apk4j5014cxzyb6j5s"; depends=[]; }; - rcdk = derive2 { name="rcdk"; version="3.3.2"; sha256="02rlg3w8dbmag8b4z4wayh7xn61xc9g3647kxg91r0mvfhmrxl2h"; depends=[fingerprint iterators png rcdklibs rJava]; }; - rcdklibs = derive2 { name="rcdklibs"; version="1.5.8.4"; sha256="0mzkr23f4d639vhxfdbg44hzxapmpqkhc084ikcj93gjwvdz903k"; depends=[rJava]; }; - rchallenge = derive2 { name="rchallenge"; version="1.1.1"; sha256="0ksbqsz6q7ri3xknzh6sl39lq9wqrqqv5bmirybglf48q0prszf5"; depends=[knitr rmarkdown]; }; + rccdates = derive2 { name="rccdates"; version="1.0.0"; sha256="1f87qlw62am2qy1zzrz91vmsn8axhld44gak61xa7046675hm98s"; depends=[rccmisc]; }; + rccmisc = derive2 { name="rccmisc"; version="0.3.7"; sha256="171s2ll759xjdnx0z24ih5ix2vcp4qnmf1nf107gij6wv8k450ab"; depends=[dplyr]; }; + rcdd = derive2 { name="rcdd"; version="1.1-10"; sha256="16j98x87dsjd7zj5pp9i5lc0a3ypr98zjwydpyhpl3zc0vnbbild"; depends=[]; }; + rcdk = derive2 { name="rcdk"; version="3.3.8"; sha256="0gwjb6ph7v94zl3kdh24dbk8hz48gi2y3xmj35wpjvzc496ldmbf"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; + rcdklibs = derive2 { name="rcdklibs"; version="1.5.13"; sha256="0ypfg4kzf07j1gi6nyifkss9s43hcb7jps9qh6990ci5qasw4z6a"; depends=[rJava]; }; + rchallenge = derive2 { name="rchallenge"; version="1.3.0"; sha256="1qn2pzch5yk771jsjcsmfsi5vddfb2w50vfqlkmsl6nf5z6sdq9k"; depends=[knitr rmarkdown]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; - rcicr = derive2 { name="rcicr"; version="0.3.2.1"; sha256="0svr869x5sbzymk95g4lm0kbdi0f7dlbgk88i8jhp4wa3g98pwyv"; depends=[aspace dplyr jpeg matlab]; }; - rclinicaltrials = derive2 { name="rclinicaltrials"; version="1.4.1"; sha256="1x8mj4gzfpgvdj3glwanr76g5x8pks8fm806bvnfls35g967z4p4"; depends=[httr plyr XML]; }; - rcorpora = derive2 { name="rcorpora"; version="1.1.1"; sha256="14lnfn9armb6rz1wcs7hdrb4j2vzh6b8pi9lsj83l3zixkxx5izk"; depends=[jsonlite]; }; - rcppbugs = derive2 { name="rcppbugs"; version="0.1.4.2"; sha256="0b057hgw0g9i83l18przjziq5sakjsz7m8vif3lprzs1d91c2xn1"; depends=[BH Rcpp RcppArmadillo]; }; - rcrossref = derive2 { name="rcrossref"; version="0.5.2"; sha256="0a4xz43y40kl97yxc1hbsf84pyvkpz1l0p26nls8wm28x2wafb3b"; depends=[bibtex dplyr httr jsonlite plyr R6 xml2]; }; + rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; + rclimateca = derive2 { name="rclimateca"; version="0.1"; sha256="0pnmazi33lvmccb1x2rkac0cwp8rf1p0659dfx9718vkdlgkvlgz"; depends=[digest httr lubridate prettymapr reshape2]; }; + rclinicaltrials = derive2 { name="rclinicaltrials"; version="1.4.7"; sha256="1y9naqi2bylihkasvfndkpwslnm393709645jwvwplzaaviy0hf7"; depends=[httr plyr XML]; }; + rcmdcheck = derive2 { name="rcmdcheck"; version="1.2.1"; sha256="04gh0drvkikn91i5zmpixhrhyjnsyxwz8k8bx4kgwwrmh1dc7f2s"; depends=[callr clisymbols crayon digest withr]; }; + rcompanion = derive2 { name="rcompanion"; version="1.4.0"; sha256="1brl9q421q8n5lab5wlp0hzgzdldwr2b9sa8qngkk3nfvzy1jdwx"; depends=[boot BSDA coin DescTools EMT FSA hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; + rcorpora = derive2 { name="rcorpora"; version="1.2.0"; sha256="0nxd2arzz2617xxcngvcrrrsky9f1b9zdmpv81zr89y08b3xh9f1"; depends=[jsonlite]; }; + rcqp = derive2 { name="rcqp"; version="0.4"; sha256="1jpzp3cs17bwfabzg7jffa3hni867mjw8yxi0igxicrbz56j33jb"; depends=[plyr]; }; + rcrossref = derive2 { name="rcrossref"; version="0.6.0"; sha256="0fy1wkn6s5pkhcfhjydy5zvra89g1p2nf5j85czxhxbq60h1jd1b"; depends=[bibtex dplyr httr jsonlite miniUI plyr R6 rappdirs shiny stringr xml2]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; + rcss = derive2 { name="rcss"; version="1.2"; sha256="08hiprjcjvc138laqrvlvrmn664b63x829ammzgrwjqcsj4kpmds"; depends=[Rcpp RcppArmadillo rflann]; }; + rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; }; rda = derive2 { name="rda"; version="1.0.2-2"; sha256="1g2q7c0y138i9r7jgjrlpqznvwpqsj6f7vljqqfzh2l6kcj43vjj"; depends=[]; }; rdatacite = derive2 { name="rdatacite"; version="0.1.0"; sha256="1h8zrgy3ig4rsrm4j9ivff71mdyabrdp71cflxahw7c3q9iyjxhf"; depends=[oai solrium]; }; rdatamarket = derive2 { name="rdatamarket"; version="0.6.5"; sha256="1y4493cvhcgyg2j5hadx1fzmv2lzwan78jighi2dzyxxzv6pxccn"; depends=[RCurl RJSONIO zoo]; }; rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; }; rddtools = derive2 { name="rddtools"; version="0.4.0"; sha256="1z9sl9fwsq8zs1ygmnjnh3p6h9hjkikbm4z7cdkxw66y0hxgn96s"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd sandwich]; }; + rdefra = derive2 { name="rdefra"; version="0.1"; sha256="1c5j2ja54k7pk86g7mh5wbqx1qkj8ks2ihmn774aqyky6nkgmx92"; depends=[plyr RCurl XML]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdian = derive2 { name="rdian"; version="0.1.1"; sha256="0i4ljcqhmrwrqbhi321iffypxj4kndx47ssljnixr3fx2lmqh0q1"; depends=[curl httr]; }; - rdrobust = derive2 { name="rdrobust"; version="0.80"; sha256="02adafhbjp259hbbbk32yllgn35xxim2mwn6yixv4wh5dgr974v6"; depends=[]; }; + rdnb = derive2 { name="rdnb"; version="0.1-1"; sha256="1mg40jad79mk95ndnljvfvyh9rhbxkw7inpg2vbsixf1ywdljri3"; depends=[brew httr xml2]; }; + rdomains = derive2 { name="rdomains"; version="0.1.5"; sha256="0xz6vdci2yxmc2850jlgj7c27cndwvk645kwky0whisg6cbv8wdg"; depends=[aws_alexa curl glmnet Matrix RSelenium urltools virustotal XML]; }; + rdpla = derive2 { name="rdpla"; version="0.1.0"; sha256="0h3m2f5rdyvdgb767hnmck4z1wq1y4hvbcwgfh7zfjcd9zns42h1"; depends=[data_table httr jsonlite tibble]; }; + rdrobust = derive2 { name="rdrobust"; version="0.95"; sha256="09dk8kgpyz3sdkvspwka9p4a6kvl7yibdppd9y06sa7grmpykvzm"; depends=[]; }; rdrop2 = derive2 { name="rdrop2"; version="0.7.0"; sha256="03r3iqi796y7s8bnyca6nya2ys7s1rdxm00sy9c7l7sh0z6npcq4"; depends=[assertthat data_table dplyr httr jsonlite magrittr]; }; rdryad = derive2 { name="rdryad"; version="0.2.0"; sha256="16wbf0hpb4pgjcq84s7ac0y1cm5i33l8n6li5z8ynivdj9w9fb46"; depends=[httr oai solr xml2]; }; + rdwd = derive2 { name="rdwd"; version="0.7.0"; sha256="0mqnf88y6g25q1a7k71ldd7szl4pm5s44cid1494m4xfdk50limb"; depends=[berryFunctions]; }; reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; }; reReg = derive2 { name="reReg"; version="1.0-0"; sha256="0xd78frrzykdrdwj39vv5m11s5v3xg9fym200gz7sffw8vjv3z96"; depends=[aftgee BB MASS SQUAREM survival]; }; - readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.2"; sha256="1cagv6l29h3p87h7c2bgba23v2wxrs2kg4zg1dk046m2x11mwx3c"; depends=[]; }; - readGenalex = derive2 { name="readGenalex"; version="1.0"; sha256="1lhfw8xbwnjhslriaxziw4dskmjfawz5g31h2yl9ds2nwvwhmdwi"; depends=[pegas]; }; + reactR = derive2 { name="reactR"; version="0.1.0"; sha256="1fw6rdi231blr416hq881pc3glv7pnn3fhc496cnj0dzwg0b32v6"; depends=[htmltools]; }; + read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; + readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.3"; sha256="0yisrg2gdd053xf1w0ssw7r4wdarqzbsqzrcngb0dl7ah0y5w7vb"; depends=[]; }; + readHAC = derive2 { name="readHAC"; version="1.0"; sha256="0z80ai6xfswwgdfh83l9sq279c97n0wz25bk2l7xfb6w0sndzq53"; depends=[]; }; + readJDX = derive2 { name="readJDX"; version="0.2.3"; sha256="0qqzplyhpyhf24111y12r0h299wz86scjymfrym2ycxm04116vw5"; depends=[stringr]; }; readMLData = derive2 { name="readMLData"; version="0.9-7"; sha256="0l752j1jq37j9pdcsbmcb23b5l8fkfsbisfr3yjy3q4rxsphc7k6"; depends=[XML]; }; readMzXmlData = derive2 { name="readMzXmlData"; version="2.8.1"; sha256="03lnhajj75i3imy95n2npr5qpm4birbli922kphj0w3458nq8g8w"; depends=[base64enc digest XML]; }; - readODS = derive2 { name="readODS"; version="1.6.2"; sha256="07c223cjn29mldhs9xs343b0i2xpcpps5pk65a1jsmjabd9k69zl"; depends=[cellranger readr xml2]; }; + readODS = derive2 { name="readODS"; version="1.6.4"; sha256="1kj648phxvpg480fdhr2sj4l8q306gjdl886zqnkwxif5mw1aq7g"; depends=[cellranger readr xml2]; }; + readability = derive2 { name="readability"; version="0.1.1"; sha256="19csrvnl1gslzamn46w5r0q4x12g56zr11m4lwp6rzwd5wcnj9ra"; depends=[data_table ggplot2 syllable tidyr]; }; readbitmap = derive2 { name="readbitmap"; version="0.1-4"; sha256="08fqqsdb2wsx415mnac9mzl5sr5and0zx72ablnlidqfxv8xsi9d"; depends=[bmp jpeg png]; }; - readbulk = derive2 { name="readbulk"; version="1.0.0"; sha256="0gsw1f8ycfg2jn2mp6dk203g0avpb4820f37pl5kn7mm7fn5w7bg"; depends=[plyr]; }; - reader = derive2 { name="reader"; version="1.0.5"; sha256="1g22pnlfr2c974s6rqnyixknhgy2crqbxg2cg2s3ja1sk29v4gr0"; depends=[NCmisc]; }; - readr = derive2 { name="readr"; version="0.2.2"; sha256="156422xwvskynna5kjc8h1qqnn50kxgjrihl2h2b7vm9sxxdyr2m"; depends=[BH curl Rcpp]; }; - readstata13 = derive2 { name="readstata13"; version="0.8.2"; sha256="1gp56wfyfcj1p1kix7iz0qr445ych3f0jkyjn5m7qkn7d43fimvd"; depends=[Rcpp]; }; - readxl = derive2 { name="readxl"; version="0.1.0"; sha256="0a0mjcn70a0nz1bkrdjwq495000kswxvyq1nlad9k3ayni2ixjkd"; depends=[Rcpp]; }; + readbulk = derive2 { name="readbulk"; version="1.1.0"; sha256="0m02isvja0ihvy1fscjdl5f9gfdlmfmabgvpirgd2m9j3lz6mi8s"; depends=[plyr]; }; + reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; + readr = derive2 { name="readr"; version="1.0.0"; sha256="0xji0dbal6xcxnsmjj678fw29n7wrj45wrd5ng99yhqqijcm9f6g"; depends=[BH curl hms R6 Rcpp tibble]; }; + readstata13 = derive2 { name="readstata13"; version="0.8.5"; sha256="1hkbh7kia7bgshhlq2n683s0gs4rw4wzyfwrbp0hq1xirqnypj0a"; depends=[Rcpp]; }; + readxl = derive2 { name="readxl"; version="0.1.1"; sha256="0ypmxp1xl2a27vlx7dj6kszbbr8fbs6lcc1ibhw1ln1p053xmlrr"; depends=[Rcpp]; }; reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; - rebird = derive2 { name="rebird"; version="0.2"; sha256="11x8db6gq9qkv9skslda4j6zgzmkmiap78rlwnlvkjvk1gzz13bf"; depends=[dplyr httr jsonlite]; }; - rebmix = derive2 { name="rebmix"; version="2.7.2"; sha256="1m71kvd7yska5iwgn0vzrhcbz8qmiwqrda201xqjxvvs8faqj66j"; depends=[]; }; - rebus = derive2 { name="rebus"; version="0.1-0"; sha256="00s11bskcmrqfb378nh9irc1x6kp9vq578jlj6pz6cvfw8hgc5lk"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; - rebus_base = derive2 { name="rebus.base"; version="0.0-1"; sha256="13z8zdr09kc14zhf1yf0r8m5h5zr5bjr8jagv9mam335b7ddgbjq"; depends=[]; }; + rebird = derive2 { name="rebird"; version="0.3.0"; sha256="0srny28mdd5zpk10pic5w0h0z21w2651rrdqsf87h7idm12j9zsw"; depends=[dplyr httr jsonlite]; }; + rebmix = derive2 { name="rebmix"; version="2.9.0"; sha256="1kbmz969wiv2jspa2pi0lgbxsj3sd9xzn24bmks6mv5hzl8pp9xb"; depends=[mvtnorm]; }; + rebus = derive2 { name="rebus"; version="0.1-2"; sha256="18vqq535dsakchwid6k2wb6jl50yf1vsqlaryadf1j0ivgawl6av"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; + rebus_base = derive2 { name="rebus.base"; version="0.0-2"; sha256="15yxh7wxb8hfbr5mhpcpyi817b5r6g6ki60hkycvxp13ss770qwn"; depends=[]; }; rebus_datetimes = derive2 { name="rebus.datetimes"; version="0.0-1"; sha256="09lv41mywm13avxb0xp8x1a2xz50zxazh3lpg27m16d4cgijmhm5"; depends=[rebus_base]; }; rebus_numbers = derive2 { name="rebus.numbers"; version="0.0-1"; sha256="0drgszz0824j49c6jk9ry0cfjky7g843ldlxrx3g2vjp0v7hznj3"; depends=[rebus_base]; }; - rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-1"; sha256="0xkb5lp6798220cqy571rxj98cy673wn8kp0im3mcnpjx6p1q3n2"; depends=[rebus_base]; }; + rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-2"; sha256="185313wh4zpp6addfdr78pjhxzazlfwgsddwk02zrzblf4iwzjdm"; depends=[rebus_base]; }; + recexcavAAR = derive2 { name="recexcavAAR"; version="0.2.2"; sha256="050klwldr8jzn0dwwh7yb0yzjckbdc4z7phd0rp8y8d5ah0n8bn2"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; }; + recmap = derive2 { name="recmap"; version="0.5.16"; sha256="0fq0l483mmb04n2qj2msngw6midwjrq5fjdh3sgzy5fhj5bcd288"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; - recommenderlab = derive2 { name="recommenderlab"; version="0.1-8"; sha256="17bab1irh7q9kznf1qz6jh81b4c98wcx323hq666dk23rc2kg7zx"; depends=[arules bcv Matrix proxy registry]; }; + recommenderlab = derive2 { name="recommenderlab"; version="0.2-1"; sha256="03gyz6davjimrbbnjglj41hysvvd2hnxsi166san1877ibblgw4c"; depends=[arules irlba Matrix proxy registry]; }; recommenderlabBX = derive2 { name="recommenderlabBX"; version="0.1-1"; sha256="042yh0h8qxj7n9hysrfdxnpb3g0zb6s5b683s7hn5mjc55q7nn4g"; depends=[recommenderlab]; }; - recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-1"; sha256="1ygdq7wd970yi7298i62r22fg657bswwkmqjabph7if6b13fjyfb"; depends=[recommenderlab]; }; - reconstructr = derive2 { name="reconstructr"; version="1.1.0"; sha256="1kswvpmhk3zzwm4nv6pjb80ww95n9bd4q9j7bhk9kql8v5mnfg5m"; depends=[Rcpp]; }; - recosystem = derive2 { name="recosystem"; version="0.3"; sha256="064rnnz4m85mwq3084m0ldj8sb5z6jwzqzkh22fagsq2xyqri15l"; depends=[Rcpp]; }; - reda = derive2 { name="reda"; version="0.2.1"; sha256="0c96vs8h0g551gb5vxrlw2q1yzca4nwg579nwysxm7z16zn7p05k"; depends=[ggplot2 plyr]; }; + recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; }; + reconstructr = derive2 { name="reconstructr"; version="2.0.0"; sha256="1pa6b8zns9495f1bdifvx19hsy5808hqbxb2bn1srwnr4s3ma1zi"; depends=[openssl Rcpp]; }; + recosystem = derive2 { name="recosystem"; version="0.4"; sha256="1h8147x9caxxprxpgzk7qj9nkafbi34zhcnaksdpv95k7vnhs4ps"; depends=[Rcpp]; }; + red = derive2 { name="red"; version="0.2.0"; sha256="0vpwx8lv0jhddcw2cypdhvchgrrkxx8l70yhsp5415mgdkmpp5x2"; depends=[BAT dismo geosphere igraph maptools raster rgdal rgeos rJava sp]; }; + reda = derive2 { name="reda"; version="0.3.1"; sha256="0313x4vm0jm0lgzspv0ldsblmjgy13dqbsafpikkh603k5pkq1js"; depends=[ggplot2 splines2]; }; redcapAPI = derive2 { name="redcapAPI"; version="1.3"; sha256="08js2lvrdl9ig0pq1wf7cwkmvaah6xs65bgfysdhsyayx0lz5rii"; depends=[chron DBI Hmisc httr stringr]; }; - reddPrec = derive2 { name="reddPrec"; version="0.2"; sha256="1s4xs98d7zkkgsvdyyck3ra7yhc1sg6pq89rf4rskmj9jp6h5x0d"; depends=[snowfall]; }; - redist = derive2 { name="redist"; version="1.2"; sha256="1169dh4v8mq1ag1crqmn9apyd0280qf2l0df6xwy7263gvmnqdmy"; depends=[coda Rcpp RcppArmadillo sp spdep]; }; - redland = derive2 { name="redland"; version="1.0.17-7"; sha256="1frn3gxzs9v1k0hlw0r0ckgjynanmrx63njlgh085i5bw4n9bzbg"; depends=[roxygen2]; }; + reddPrec = derive2 { name="reddPrec"; version="0.3"; sha256="01dsgd28ps1f32l3ppz4fbzihs5i79zb1nqg9r3b21fsx1ly44d6"; depends=[snowfall]; }; + redist = derive2 { name="redist"; version="1.3"; sha256="19d5m17b8rzy9fsl95r0zdr5swawdbdbg0pib85028f8pqh9g5f1"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; + redland = derive2 { name="redland"; version="1.0.17-9"; sha256="01jx6r7zznb6cpi2bx36fpsgig3bkc1nv9afz5s2nfqisxiq48w5"; depends=[roxygen2]; }; ref = derive2 { name="ref"; version="0.99"; sha256="0f0yz08pqpg57mcm7rh4g0rbvlcvs5fbpjkfrq7fmj850z1ixvw0"; depends=[]; }; - refGenome = derive2 { name="refGenome"; version="1.6.0"; sha256="0pn27m38x6xjpxrfvg92wwkx3syvvssy9dzn2djbq3lagvrz3k3z"; depends=[DBI doBy RSQLite]; }; + refGenome = derive2 { name="refGenome"; version="1.7.0"; sha256="0xj5mqk7i4bl6ffdx346q558sn8hmqlkfpiv7ggrfhaqg02f6war"; depends=[DBI doBy RSQLite]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.1.1"; sha256="04199nxh216msaghkp66zsi96h76a7c42ldml0fm66v2vamcslg8"; depends=[boot car extremevalues outliers]; }; + refimpact = derive2 { name="refimpact"; version="0.1.0"; sha256="03634gmfr423bjygdxcpgmnh9nm2l86rfmvkvq74qymwc2gl6l6p"; depends=[curl jsonlite tibble]; }; + refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; refset = derive2 { name="refset"; version="0.1.0"; sha256="0yj87sp6ghxv20hz5knmw3d7way1hsggk759wqxsbfprd38y6khd"; depends=[]; }; - refund = derive2 { name="refund"; version="0.1-14"; sha256="17hig8zr8sj5jjxxrfr3bhvhhbimns92dzf3b7ybf94vzvrm8wg8"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix MCMCpack mgcv nlme pbs RLRsim]; }; - refund_shiny = derive2 { name="refund.shiny"; version="0.2.0"; sha256="1m7s9xnh7p7z7lc0dyizdmfnq3ksc782d3vavqrcakswjrkk3rir"; depends=[dplyr ggplot2 gridExtra lme4 refund reshape2 shiny]; }; + refund = derive2 { name="refund"; version="0.1-16"; sha256="0npq12bf3qmcbgwdxilwvzvf5x2m3qrxljlsx1sz9xczms2dz7kg"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; + refund_shiny = derive2 { name="refund.shiny"; version="0.3.0"; sha256="0r2xrm4wz35wn9zg4vvw2ysl7zzbz9i080vnbrlp4yrhhlkhpkm1"; depends=[dplyr ggplot2 gridExtra lme4 plotly refund reshape2 shiny tidyr]; }; refund_wave = derive2 { name="refund.wave"; version="0.1"; sha256="1vnhg7gi5r8scwivqjwhrv72sq8asnm4whx3jk39saphdxpk5hxv"; depends=[glmnet wavethresh]; }; regRSM = derive2 { name="regRSM"; version="0.5"; sha256="0nbp3yjk9r7qvwm7wla39155rmqnvpdb720iq3b0hcy1bbsxbk9s"; depends=[doParallel foreach Rmpi]; }; + regclass = derive2 { name="regclass"; version="1.5"; sha256="0kha9b5ki55ggwh8cmlphg1alf1dq8if5dknisfbvd3f2x4dqf02"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; + regexPipes = derive2 { name="regexPipes"; version="0.0.1"; sha256="1hk0rhvmgzcyf5cyl8hjznl3ll25kpasqikfr6nxd6ian2slvmmb"; depends=[]; }; regexr = derive2 { name="regexr"; version="1.1.0"; sha256="1gjv4wl4gjsh5rr0kz057x9j4dhikrm3zzlmxlhd1f9srjdmcdzy"; depends=[]; }; registry = derive2 { name="registry"; version="0.3"; sha256="0c7lscfxncwwd8zp46h2xfw9gw14dypqv6m2kx85xjhjh0xw99aq"; depends=[]; }; reglogit = derive2 { name="reglogit"; version="1.2-4"; sha256="0ma1wddxhmja268ddkpcvskqf4lwq61brswnm600fms8ks7r78d3"; depends=[boot Matrix mvtnorm]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; regress = derive2 { name="regress"; version="1.3-14"; sha256="0qnks28fr8siq95iiiqyvz82cbdg14i18rj7g9rqyjhiam12fshl"; depends=[]; }; regsel = derive2 { name="regsel"; version="0.2"; sha256="0wwwpawqsqimaldy0zxnqsy23nwp30ypa5dnrnndwhbs4qz99c9w"; depends=[elasticnet glmnet]; }; + regsem = derive2 { name="regsem"; version="0.5.0"; sha256="0ajva492a0z0q1ixdh24w10vbq7fknn66cyjzla5aqcmc5gggp7g"; depends=[lavaan Rcpp RcppArmadillo]; }; + regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; }; - rehh = derive2 { name="rehh"; version="1.13"; sha256="0hi9bfclai1b948yq9fp1q7rxb8nwvdm368l09la8ghlgxi5lnm8"; depends=[gplots]; }; - relMix = derive2 { name="relMix"; version="1.0"; sha256="1p6zpbilfyfsaa39a54xm4yvqapamlxydzzcr0g6m60abrsdwhg5"; depends=[Familias paramlink]; }; + regtools = derive2 { name="regtools"; version="1.0.1"; sha256="0807r8721qmdl8ahvlzcvqaq2rfvlvhblwbwdpi79fm7dk8vvq1i"; depends=[car dummies FNN mvtnorm]; }; + rehh = derive2 { name="rehh"; version="2.0.2"; sha256="00wxx6w9ahddrg3lz14cqyg3dn0rfcxwy1z8arhdp1pn8d48pahw"; depends=[gplots rehh_data]; }; + rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; + reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; + rel = derive2 { name="rel"; version="1.2.0"; sha256="0x68zivcydczq7rxxzjbgif8c4qbmp80nbz78f7292xlbzc39hjx"; depends=[]; }; + relMix = derive2 { name="relMix"; version="1.2.2"; sha256="03mn7rnx2kh7v4alfvkiw3iakxi9dkfnmhgqsdfld3qrijjp1i6y"; depends=[Familias gWidgets paramlink]; }; relSim = derive2 { name="relSim"; version="0.2-0"; sha256="0cqcp7r263sk874l17wz84mzm4b1dxbfbsk74937rcz1wfc623k5"; depends=[Rcpp]; }; rela = derive2 { name="rela"; version="4.1"; sha256="00ksm7zh1mpd2d5c5d823id3sxj0h3x0ccg6a40fadibvr1ay3ny"; depends=[]; }; + relabeLoadings = derive2 { name="relabeLoadings"; version="1.0"; sha256="16gxdrhkaaa33hypnsacn4vd1g3lbqdl3j8p8va54v777c561g81"; depends=[]; }; relaimpo = derive2 { name="relaimpo"; version="2.2-2"; sha256="1rxjg2yw2gyshaij98w83cshxwscnq3ql7bg13n7v4nbjsi1l6zh"; depends=[boot corpcor MASS mitools survey]; }; relations = derive2 { name="relations"; version="0.6-6"; sha256="1sl22wmnxh957dyw6rwv50ihrf27k7ak66w7avvf9llm0a0d6gsf"; depends=[cluster sets slam]; }; relax = derive2 { name="relax"; version="1.3.15"; sha256="0cgvxw3pmy9kx8p81bb5n5nnbn6l9hm07k6hdy7p2j2gl15xxnpq"; depends=[]; }; relaxnet = derive2 { name="relaxnet"; version="0.3-2"; sha256="1l83rk7r4vkcxbfljmibzm8lzpx0vf406hv4h5cy9x0k3rz2bfh0"; depends=[glmnet]; }; relaxo = derive2 { name="relaxo"; version="0.1-2"; sha256="1rzmq7q3j271s6qwwrmwidv0vxcjpgjhyiqgr6fkczkai2lbnd8x"; depends=[lars]; }; - reldist = derive2 { name="reldist"; version="1.6-4"; sha256="0v86wws29zy67jidrvfxkfwhpxppqrpq5h3b22cjif5qjqz3kk8f"; depends=[mgcv]; }; + reldist = derive2 { name="reldist"; version="1.6-6"; sha256="09vips7spcz0fahrpy0bl15hk43zgnq74h189hmygyi41l95aywa"; depends=[Hmisc mgcv]; }; relen = derive2 { name="relen"; version="1.0.1"; sha256="0br7c3j30a1yc61pyinmk5lvk8zw9rivd0z2096g6crgmbzix8ml"; depends=[]; }; relevent = derive2 { name="relevent"; version="1.0-4"; sha256="10bf1s7jmas8ck1izqibqcaqg4z55ciwdpd9pm2697y8z0jhr2rj"; depends=[coda sna trust]; }; reliaR = derive2 { name="reliaR"; version="0.01"; sha256="000nafjp386nzd0n57hshmjzippiha6s6c4nfrcwl059dzmi088i"; depends=[]; }; - relimp = derive2 { name="relimp"; version="1.0-4"; sha256="1i9j218b6lh6ag4a8x4vwhmqqclbzx46mpwd36s8hdqayzs6lmad"; depends=[]; }; - relsurv = derive2 { name="relsurv"; version="2.0-7"; sha256="107xn5an8ggwpsp5dhk88xglfkd90d06f63akd09vwaax92rws1y"; depends=[date survival]; }; + relimp = derive2 { name="relimp"; version="1.0-5"; sha256="0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c"; depends=[]; }; + relsurv = derive2 { name="relsurv"; version="2.0-9"; sha256="1laykfmzv4yfkj406iag0s8cdms662y9fdrxfd29spj47zniy9ym"; depends=[date survival]; }; rem = derive2 { name="rem"; version="1.1.2"; sha256="0m0lhv8hc6p0d7nmjig2678n7qrb9c15jkdqrx946f42k1f1dz6f"; depends=[flexsurv Rcpp survival]; }; remMap = derive2 { name="remMap"; version="0.2-0"; sha256="1k2niiaq2lr4inrx443clff9cqqvyiiwd45k7yqjd8ixnbaa3mrk"; depends=[]; }; + rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; remix = derive2 { name="remix"; version="2.1"; sha256="0s1gaf7vj08xd4m7lc9qpwvk0mpamabbxk71970mfazx6hk24dr0"; depends=[ascii Hmisc plyr survival]; }; - remote = derive2 { name="remote"; version="1.0.0"; sha256="09840z50x5i8bsi49s3asqhcz84z16pyq9w50yay4h8x82w3hfh3"; depends=[foreach raster Rcpp]; }; - remoter = derive2 { name="remoter"; version="0.2-0"; sha256="08wn0p95rj39s0df38jqs9bf52fw5a6m92sbn7kfspb81q1fzx8k"; depends=[assertthat pbdZMQ sodium]; }; - rentrez = derive2 { name="rentrez"; version="1.0.1"; sha256="1viw6lcjl26yq8yna8mfhriphvdjq8nnkbds0yq66fmah44l493v"; depends=[httr jsonlite XML]; }; + remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; + remoter = derive2 { name="remoter"; version="0.3-2"; sha256="0r7hm5cdbmkfn8lv07mn0lb1qq1g92l0hznjih1ykymjm3h6qyh0"; depends=[assertthat getPass pbdZMQ]; }; + remotes = derive2 { name="remotes"; version="1.0.0"; sha256="03qwh7wb5zn08r1n5bylnb9615p0qsbx1ca644b528mf0pm7i7yc"; depends=[]; }; + rentrez = derive2 { name="rentrez"; version="1.0.4"; sha256="03gfq6d0vs3np1x292lzdahhc70npqvzbg9aj9c80amiyhs7c1ad"; depends=[httr jsonlite XML]; }; + repeated = derive2 { name="repeated"; version="1.1.0"; sha256="0cdyzhhv89186q5nwablcjbqvm7ncq2w5d09iidbajrac9wd1y60"; depends=[rmutil]; }; repfdr = derive2 { name="repfdr"; version="1.1-3"; sha256="15f7x7vqwlpyzvzsybyz825a9dmglbrngjmajrsqlwffypgxjvi8"; depends=[]; }; repijson = derive2 { name="repijson"; version="0.1.0"; sha256="16iypvsmh5r9pk2k6npp17ya5dgkxihsj29pppd3zvdpm3vvd8k1"; depends=[geojsonio ggplot2 jsonlite OutbreakTools plyr sp]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-1"; sha256="0q6mfrdjpx6nh4xgr5i7ka3xvnx9585xdhni020q4pm05rhimid2"; depends=[spatstat]; }; - replicationInterval = derive2 { name="replicationInterval"; version="1.0.0"; sha256="1ll6gyibd41kasc3sn6hvydc6xaacx6h5q5nhj09ha36x4lgr0gb"; depends=[MBESS]; }; + replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; + replyr = derive2 { name="replyr"; version="0.2.3"; sha256="04qjfsb7cq3x993ai4skkzj1p60y616qpmh3v94n260z0syd2gxj"; depends=[dplyr wrapr]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; - repo = derive2 { name="repo"; version="1.0"; sha256="103bjd880hd76qpipryl17l9972hwj5c3dxicjq0dcbdfmdk7q7h"; depends=[digest]; }; + repo = derive2 { name="repo"; version="2.0.2"; sha256="1rgcgl1a0sz3mnj0ny7507bkrlxbbh7ab39jwfm99ssipia12jjh"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; reportRx = derive2 { name="reportRx"; version="1.0"; sha256="0npiflql0lq8sqp6xgydxbw7xdr0zdxj1s2h4bnpmn4clc05r7m4"; depends=[aod cmprsk geoR reshape stringr survival xtable]; }; - reportr = derive2 { name="reportr"; version="1.2.0"; sha256="00nbkv6s7lydxq1gd532gkfl96dbrdq4p6bmqxnbjhrwx8c3kx6h"; depends=[ore]; }; + reportr = derive2 { name="reportr"; version="1.2.2"; sha256="1fl4hy4ck4aapy152vn9gjd7w5vgvh2gz2ky6p0wwahah7m9b255"; depends=[ore]; }; reports = derive2 { name="reports"; version="0.1.4"; sha256="0r74fjmdqax2x5fhbkdxb8gsvzi6v794fh81x4la9davz6w1fnxh"; depends=[]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; + repr = derive2 { name="repr"; version="0.10"; sha256="06wnmc1xvkf6kzb396qjvn0m71lh1mp2q5p2lh4s20i1l42469cr"; depends=[]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; - reproducer = derive2 { name="reproducer"; version="0.1.4"; sha256="1iraq2aria3sgs63cm4508775y7qnaz1lxrs630nma0ndmjsp2ml"; depends=[ggplot2 gridExtra metafor openxlsx RColorBrewer tm wordcloud xtable]; }; + represtools = derive2 { name="represtools"; version="0.1.2"; sha256="1zkabch49q23kd1786km5cb9wcaccbxds11v9hwjzsgrs15g5w35"; depends=[whisker]; }; + reprex = derive2 { name="reprex"; version="0.1.1"; sha256="0jxsnlspy12dnbpkghkmkr6p6783dhvsk3g9mj7gpn5j74qfk6li"; depends=[callr clipr knitr rmarkdown whisker]; }; + reproducer = derive2 { name="reproducer"; version="0.1.8"; sha256="1yw6d81xg8zqc91x737z0mfx10xcfvd0sr0vs8afvhbqnxbjk3jg"; depends=[ggplot2 gridExtra lme4 MASS metafor openxlsx xtable]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; + requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; rerddap = derive2 { name="rerddap"; version="0.3.4"; sha256="1rfcql21kd39q5r1827scqxs124x3vkvxazdqp13g5qyalmdvb30"; depends=[data_table digest dplyr httr jsonlite ncdf4 xml2]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; + resampledata = derive2 { name="resampledata"; version="0.2.0"; sha256="1s683jhrpkhcn7cxjx5cipgkrbmhk5jr7hxniwc8ka7cbq3y22wl"; depends=[]; }; resemble = derive2 { name="resemble"; version="1.2.2"; sha256="189a6b1y720w9ff8cyqazd2d3v1msbfw8zdqr5rmilxvxmnspccs"; depends=[foreach iterators Rcpp RcppArmadillo]; }; - reservoir = derive2 { name="reservoir"; version="1.1.4"; sha256="0c7ankmwph38nny24rw9ysqmwhszp8wivpawpf3qdy2wxhm1ygfv"; depends=[gtools]; }; - reshape = derive2 { name="reshape"; version="0.8.5"; sha256="08jm9fb02g1fp9vmiqmc0yki6n3rnnp2ph1rk8n9lb5c1s390f4k"; depends=[plyr]; }; - reshape2 = derive2 { name="reshape2"; version="1.4.1"; sha256="0hl082dyk3pk07nqprpn5dvnrkqhnf6zjnjig1ijddxhlmsrzm7v"; depends=[plyr Rcpp stringr]; }; + reservoir = derive2 { name="reservoir"; version="1.1.5"; sha256="1qvjq8j2gxp6b8m3k3822f9na8a1kbwzzsmq70m763dcq293rgiz"; depends=[gtools]; }; + reshape = derive2 { name="reshape"; version="0.8.6"; sha256="1f1ngalc22knhdm9djv1m6abnjqpv1frdzxfkpakhph2l67bk7fq"; depends=[plyr]; }; + reshape2 = derive2 { name="reshape2"; version="1.4.2"; sha256="0swvjmc9f8cvkrsz463cp6snd8bncbv6q8yrfrb4rgkr0dhq6dvd"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; + respirometry = derive2 { name="respirometry"; version="0.3.1"; sha256="1v2i86zz2avyh0q3h2mjq6b967yi26xv7vwa66c390viiqrv4hpg"; depends=[birk lubridate marelac measurements seacarb]; }; + restfulr = derive2 { name="restfulr"; version="0.0.8"; sha256="1dysvw757fcnmz94an8wzcq7h334f3j8lgv4j5w4lhgaa1949m94"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; }; restorepoint = derive2 { name="restorepoint"; version="0.1.7"; sha256="101lh84jsz84q0ch0j5adsjgza4ggv9xvwbq0d5wik7z5wa39pa6"; depends=[]; }; - resumer = derive2 { name="resumer"; version="0.0.1"; sha256="1xl1jl6bvjlx2djfm8k0za1wcrimsfc77qk6zybbxls0srayh7c4"; depends=[dplyr rmarkdown useful]; }; + restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; + restriktor = derive2 { name="restriktor"; version="0.1-55"; sha256="1yrzx7w14s04ppc16iw2hialx1k6k45ag9702vm8cnf31hm14kxp"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.0.0"; sha256="0a28r0rkg4m6jsrvczkkpdqrca3q5l5pgb4wyz6pvy5scjlvmpls"; depends=[rjson]; }; retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; }; retistruct = derive2 { name="retistruct"; version="0.5.10"; sha256="1wg2a906y09hcqba42hh9r2x59w35dms2aa5mw44avigc1nwm0s2"; depends=[foreign geometry png R_matlab rgl RImageJROI RTriangle sp ttutils]; }; - retrosheet = derive2 { name="retrosheet"; version="1.0.2"; sha256="079rfc55sy315i7zhv1a8r6drgpiglbf3b4gwyria2mfbn94a5qb"; depends=[data_table RCurl stringi XML]; }; - reutils = derive2 { name="reutils"; version="0.2.2"; sha256="0byp2kh1g7zi391y55b2y34gbg5x459xn6ydz8ns2qah2aqciqwk"; depends=[assertthat jsonlite RCurl XML]; }; + reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; }; + revdbayes = derive2 { name="revdbayes"; version="1.0.0"; sha256="1q6fad3jpvpj0k976010i18ias540k0b2skiw7jk5z1zj9rrxi10"; depends=[rust spatstat]; }; revealedPrefs = derive2 { name="revealedPrefs"; version="0.2"; sha256="1f871y4wkjznzgwxfbnmrfiafq43cyf0i5hjy68ybxc7bbvfryxc"; depends=[Rcpp RcppArmadillo]; }; - revealjs = derive2 { name="revealjs"; version="0.6"; sha256="1pyl20zbsy9m3g0shfv4d4cv7019zxz4329c3l8v3jaqbd1rmlas"; depends=[rmarkdown]; }; + revealjs = derive2 { name="revealjs"; version="0.8"; sha256="0cv410k7nflzkwz7g7zvc86wsmqz0kxlciz7mms7bixrwvqq2w0a"; depends=[rmarkdown]; }; reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; }; rex = derive2 { name="rex"; version="1.1.1"; sha256="0cs13hqv2wb549rhq84psky401pz8r41ia7c0pnyvhxfa2l6zrr8"; depends=[lazyeval magrittr]; }; rexpokit = derive2 { name="rexpokit"; version="0.24.1"; sha256="143zi6qb0l8vbx87jf58v1zfxqmvv6x4im1knd6q4dpp9gffqs22"; depends=[Rcpp SparseM]; }; - rfPermute = derive2 { name="rfPermute"; version="2.0"; sha256="166zcpz7zdl7rh5dkl1bbsfnpllk7k83r7pkhmfnk92mwn94sx4v"; depends=[abind ggplot2 gridExtra randomForest]; }; - rfUtilities = derive2 { name="rfUtilities"; version="1.0-2"; sha256="1hhiyrvz25pf1fxzcmaf8m5c3v57hxv8qvmrk2a87wdsrklh073c"; depends=[randomForest]; }; + rfPermute = derive2 { name="rfPermute"; version="2.1.5"; sha256="0c7yi395j640mvnr1qlm9hy1w6vva33fa2lqb3amzkafy4j1cs63"; depends=[abind ggplot2 gridExtra randomForest reshape2 swfscMisc]; }; + rfUtilities = derive2 { name="rfUtilities"; version="2.0-0"; sha256="0jwn1rs4a8y7syyv8sgvkjpi69y5jv59xlznm5a3j4pidj5kxf10"; depends=[randomForest]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; - rfishbase = derive2 { name="rfishbase"; version="2.1.0"; sha256="00q5r3h7s7m6x9vajm1j194g38h6z1c54ndc3044xjp2zkk7l5lp"; depends=[dplyr httr lazyeval tidyr]; }; + rfishbase = derive2 { name="rfishbase"; version="2.1.1"; sha256="17xkbn930vczxc8b9bljambzhc5j14b7fjswbrl8c8ygdhcd436n"; depends=[dplyr httr lazyeval tidyr]; }; rfisheries = derive2 { name="rfisheries"; version="0.2"; sha256="16j3hn1py8khqadmh81qsg76c62wzqkaq3fn39z0z5mgynmcm62j"; depends=[assertthat data_table ggplot2 httr rjson]; }; + rflann = derive2 { name="rflann"; version="1.3"; sha256="1y8m52vlrcl69srssd23zgg90yfhh9rryd16hk1dnqg713qhksgm"; depends=[Rcpp RcppArmadillo]; }; rfml = derive2 { name="rfml"; version="0.1.0"; sha256="133adpfjpp14m47841k6ybq9lrvby9bxgr5zs4i3akjr2575nq1j"; depends=[httr jsonlite PKI XML]; }; - rfoaas = derive2 { name="rfoaas"; version="0.1.8"; sha256="1q4c93isdv1cjwb66rr3krpw69anhr5z2pw2z1fgq4v94nr69mf8"; depends=[httr]; }; - rfordummies = derive2 { name="rfordummies"; version="0.1.2"; sha256="1x4qmjvnzsj0wkzyl1pzaf3b66lhyb4bk72j33bxgr8gb8bzrhp1"; depends=[]; }; + rfoaas = derive2 { name="rfoaas"; version="1.1.0"; sha256="15a49s84xyyv324gf15avgxa4cj7dpbmlxcgsrnddxy661yd3bg5"; depends=[httr]; }; + rfordummies = derive2 { name="rfordummies"; version="0.1.3"; sha256="13jqvww65wzac1c8ajkljz89vi4j76y9ga52w3ygajjzg0rn15l5"; depends=[]; }; rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3"; sha256="0ff4v7px4wm5rd4f4z8s4arh48hgayqjfpnni2997c92wlsq3d12"; depends=[Rcpp]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; rgam = derive2 { name="rgam"; version="0.6.3"; sha256="0mbyyhhyr7ijv2sq9n7g0vaxivngwf4nbb5398xpsh7fxvgw5zdw"; depends=[Rcpp RcppArmadillo]; }; - rgbif = derive2 { name="rgbif"; version="0.9.2"; sha256="1lacxm2dyhqvcvkmfxfzg02wiyp7hmkfi8c4xizxsfv29kr2xphh"; depends=[data_table ggplot2 httr jsonlite magrittr oai V8 whisker xml2]; }; + rgbif = derive2 { name="rgbif"; version="0.9.7"; sha256="1ajwmxk8pgmgba2vv4pw424zzsjbx0z5ppsavmiy6zjxns7l5rbn"; depends=[data_table geoaxe ggplot2 httr jsonlite magrittr oai tibble V8 whisker xml2]; }; rgcvpack = derive2 { name="rgcvpack"; version="0.1-4"; sha256="1vlvw9slrra18qaizqk2xglzky0i6z3bsan85x908wrg8drss4h5"; depends=[]; }; - rgdal = derive2 { name="rgdal"; version="1.1-3"; sha256="0ah2qsrz050pbkyijasqc22xvfgsyh0djb8ma3ixfsyrfrflnbpa"; depends=[sp]; }; + rgdal = derive2 { name="rgdal"; version="1.2-5"; sha256="03bi89n2n80lr0v99s130yl256nf3ww5hr02kpb2lawzz8d3rb7v"; depends=[sp]; }; rgenoud = derive2 { name="rgenoud"; version="5.7-12.4"; sha256="19y0297fsxggjrdjv8n3a5klbqf8y3mq4mmdz6xx28cz3k65dk4n"; depends=[]; }; - rgeolocate = derive2 { name="rgeolocate"; version="0.5.0"; sha256="0n680a9wnw2xvql0584kqrs22ymj9rr1lbr670j55y6far9pwa0m"; depends=[httr Rcpp]; }; - rgeos = derive2 { name="rgeos"; version="0.3-17"; sha256="0m05cc7wdswy0p2qdh4zz1p5zm6lwyhdqrkvws0s86zcl4l1z96c"; depends=[sp]; }; + rgeoapi = derive2 { name="rgeoapi"; version="1.1.0"; sha256="0k8p1l0vrgx0bifbc2i9gxxwih513vbqhjh7fiifyfq3r74i4j7k"; depends=[httr magrittr rjson]; }; + rgeolocate = derive2 { name="rgeolocate"; version="1.0.0"; sha256="0mac4rzgw4lp47rp9nxs7dgw0dzdxnb144an2zj8fcsnvm462vjg"; depends=[httr Rcpp]; }; + rgeos = derive2 { name="rgeos"; version="0.3-22"; sha256="0bl5hwf0gn5dnm5v35hpkp1w7aiy3hzf2k9nrv70j33d7r8gbnif"; depends=[sp]; }; + rgeospatialquality = derive2 { name="rgeospatialquality"; version="0.3.2"; sha256="19g685bz9x7jbn8mmz0yy6mr3qhkjdvvglhfxxh45mjvi2dz5aj8"; depends=[httr jsonlite plyr]; }; rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; }; - rggobi = derive2 { name="rggobi"; version="2.1.20"; sha256="1a7l68h3m9cq14k7y96ijgh0iz3d6j4j2anxg50pykz20lnykr9g"; depends=[RGtk2]; }; - rgho = derive2 { name="rgho"; version="0.0.1"; sha256="0zdxq24jrvgl933ww5n0pp9psri99364ibxrvawc42rnv8220gjr"; depends=[curl dplyr httr lazyeval magrittr memoise readr tidyr xml2]; }; - rgl = derive2 { name="rgl"; version="0.95.1441"; sha256="1ryqz7pn9ag35lkpnfhm4w3zahm2j47dyd03h7bcrg535ilr4afn"; depends=[]; }; + rggobi = derive2 { name="rggobi"; version="2.1.21"; sha256="0zi4rhggngm0y8dsjxqlr2mmfc5wzi7l1qcp5gin4bjlbyf8yb3z"; depends=[RGtk2]; }; + rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; }; + rgl = derive2 { name="rgl"; version="0.97.0"; sha256="0firba0rvp8kc5w2s1glzk72m2awkg4c2vsd3xhp9b247dvr1aj2"; depends=[htmltools htmlwidgets jsonlite knitr magrittr shiny]; }; rglobi = derive2 { name="rglobi"; version="0.2.9"; sha256="15kc3gb998ryrnpw6nn87vsg63xknchs0hbl33g9napyj5wjmmiw"; depends=[RCurl rjson]; }; - rglwidget = derive2 { name="rglwidget"; version="0.1.1434"; sha256="1483l8gfxnmdps22aiqxnxginc383sj0105bj8d620q9y041625z"; depends=[htmltools htmlwidgets jsonlite knitr magrittr rgl shiny]; }; + rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; rgp = derive2 { name="rgp"; version="0.4-1"; sha256="1p5qa46v0sli7ccyp39iysn04yvq80dy2w1hk4c80pfwrxc6n03g"; depends=[emoa]; }; rgpui = derive2 { name="rgpui"; version="0.1-2"; sha256="0sh5wj4f2wj6g3r7xaq95q89n0qjavchi5kfi6sj1j34ykybbs3g"; depends=[emoa rgp shiny]; }; rgr = derive2 { name="rgr"; version="1.1.13"; sha256="1l6cf3hmi6mzsqg6dpnw90a6ljhvwar4rjjkamx4mc9hlfsrkggq"; depends=[fastICA MASS]; }; - rgrass7 = derive2 { name="rgrass7"; version="0.1-4"; sha256="0ify8djj3q63xl6d1v4wa7s92rvmraanl8z9l4nd4a59ga09c3s1"; depends=[sp XML]; }; - rhandsontable = derive2 { name="rhandsontable"; version="0.3.1"; sha256="0mwzy5l86fg7wmjd94a4bx8gsqrqyczkx558ggw5izbcj6n44g3k"; depends=[htmlwidgets jsonlite magrittr]; }; + rgrass7 = derive2 { name="rgrass7"; version="0.1-9"; sha256="079rkzxpp6l9gppnag83sq87y5l6pby3k0dg32065sr758yr3vx0"; depends=[sp XML]; }; + rgw = derive2 { name="rgw"; version="0.1.0"; sha256="12f7bsfg24cld9y47jyqxswgc1bk4adbhhdpycapinbcfhyzc91p"; depends=[]; }; + rhandsontable = derive2 { name="rhandsontable"; version="0.3.4"; sha256="1ng97l2x9hyqv3cckis81p5bxm4wndv6sipyxy26x9pnyw9lq3kp"; depends=[htmlwidgets jsonlite magrittr]; }; + rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; }; + rhoR = derive2 { name="rhoR"; version="1.1.0.0"; sha256="00djh16s144a9cl2z8zm3za1bsnpzd3i5b9nyqad10xlkgll36li"; depends=[]; }; rhosp = derive2 { name="rhosp"; version="1.07"; sha256="09wq96micv9wpr3sx8ir7frkanpy3zi3mwn6rbixw2kxvn5wkkfn"; depends=[]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; - rich = derive2 { name="rich"; version="0.3"; sha256="122xb729xlm8gyb7b3glw4sdvrh98wh89528kcbibpx83bp3frc0"; depends=[boot permute vegan]; }; - ridigbio = derive2 { name="ridigbio"; version="0.3.3"; sha256="02cxjnvlr9pk3dyc89xvgppw1mjbi3jahddcsqck4dl6ifb6cj2v"; depends=[httr jsonlite plyr]; }; + rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; + ridigbio = derive2 { name="ridigbio"; version="0.3.5"; sha256="0526nscxynl3857zybpms1wr3230qby29kxglm919pcdvpjb5kz5"; depends=[httr jsonlite plyr]; }; + riem = derive2 { name="riem"; version="0.1.1"; sha256="0lwhsxb4pm26kb65hs8pa63bsbrgy0zchqm4i6pq9f2r9h8vsm1m"; depends=[httr jsonlite lubridate tibble]; }; rinat = derive2 { name="rinat"; version="0.1.4"; sha256="1m5k1wcinm6is3mf86314scgy3xfifz7ly7il5zgqyg9jkkpywbz"; depends=[ggplot2 httr jsonlite maps plyr]; }; rindex = derive2 { name="rindex"; version="0.12"; sha256="1k9zihvrp955c4lh70zjlsssviy2app8w6mv5ln4nawackbz0six"; depends=[regtest]; }; - rio = derive2 { name="rio"; version="0.3.0"; sha256="1drgy70mxy7jn68587h4fwxapjps7iw6d41z02qbq09a4m05py3p"; depends=[curl data_table foreign haven jsonlite openxlsx readODS readxl urltools XML yaml]; }; - rioja = derive2 { name="rioja"; version="0.9-5"; sha256="0bi80d8ffn1kgs0b45ia8rj057id8l3mnph16y5wc5nr8fndxrm4"; depends=[gdata lattice mgcv vegan]; }; + rintrojs = derive2 { name="rintrojs"; version="0.1.2"; sha256="16i6s0km8l22rx2n9kn90z76himfckj387az47snhzbgnwlby3yc"; depends=[jsonlite shiny]; }; + rio = derive2 { name="rio"; version="0.4.16"; sha256="030y9hxsdapwsp9lhz013pyz2kgkrymad09bkc6rzykzqswsf61n"; depends=[csvy curl data_table foreign haven jsonlite openxlsx readODS readr readxl urltools xml2 yaml]; }; + rioja = derive2 { name="rioja"; version="0.9-9"; sha256="19b8j49qsrvcmhlwdaf1xqvwampn8b02dp876czzcgxhgkxvc6yw"; depends=[gdata lattice mgcv vegan]; }; ripa = derive2 { name="ripa"; version="2.0-2"; sha256="0n1gaga0d4bb9qdlm7gksa1nwi4y28kbgwr3icwqgihf1bfb9m81"; depends=[Rcpp]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; riskRegression = derive2 { name="riskRegression"; version="1.1.7"; sha256="1db331s67w9i84dji05fjh8ml938w2y694gkyq00h14fkmwr9g4g"; depends=[cmprsk pec prodlim randomForestSRC rms survival]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; rite = derive2 { name="rite"; version="0.3.4"; sha256="196ashcfj5p52qpnpnrkg7vxq87v7vhf1d7z40mk134gmxk2784j"; depends=[knitr markdown RCurl tcltk2]; }; + ritis = derive2 { name="ritis"; version="0.5.4"; sha256="04vjbjqp5b9apafns2snh04hplgcfydzn52v63jgllyrn101vrjk"; depends=[data_table httr jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-4"; sha256="1c9k62plqgxcgcm2j1s26hqvgww96n6bfjz2yk7m3p2wf8gkkyam"; depends=[MASS quantreg rrcov]; }; + riverdist = derive2 { name="riverdist"; version="0.13.1"; sha256="1xpl47hhddr5xa1px8fxw8l2hicg78cnz5ak2496f0h662g8zb0w"; depends=[rgdal sp]; }; rivernet = derive2 { name="rivernet"; version="1.0"; sha256="0za5k00k9vivpq4wr1xqc4aw7mlcxhjj2b3iiip1qy13fg7bhbjm"; depends=[]; }; - riverplot = derive2 { name="riverplot"; version="0.5"; sha256="024i1w08c51bflmw608zizif6419xx40sk6pibnqyjnk74p6y7sm"; depends=[]; }; + riverplot = derive2 { name="riverplot"; version="0.6"; sha256="0q1icpny8nkxyjhawyjzwrw8qlz0ayn2xyrsqrm4vkxyv6c9xk8z"; depends=[]; }; rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; rivr = derive2 { name="rivr"; version="1.2"; sha256="0ankpfixggwdv17ba8i5iln0zzmngqrhvh3dg8lis9kqg6wa89yr"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; rjags = derive2 { name="rjags"; version="4-6"; sha256="1bc9bzq31liawg3nzwfczf75vgg56fnqjw0997xvlic4ghgbn96g"; depends=[coda]; }; rje = derive2 { name="rje"; version="1.9"; sha256="1dyd34z6lb0p6zmyax5dpzflgc9a4saka33mvdfcxi5pj0rnygaz"; depends=[]; }; rjson = derive2 { name="rjson"; version="0.2.15"; sha256="1vzjyvf57k1fjizlk28rby65y5lsww5qnfvgnhln74qwda7hvl3p"; depends=[]; }; - rjstat = derive2 { name="rjstat"; version="0.2.1"; sha256="0chb3mypmgqz7wncl01yy93xpz1mmlcc6x1cib37zxc8dy79jm1s"; depends=[assertthat jsonlite]; }; + rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; }; + rjstat = derive2 { name="rjstat"; version="0.3.0"; sha256="0r772p0a0x6g96k6r26vb6vjxa68mzjslwg71r0wysa9kqhvypm4"; depends=[checkmate jsonlite]; }; rkafka = derive2 { name="rkafka"; version="1.0"; sha256="02h3nlffgd48xm38i2arlrgbilraf6r7k65s35906v33i0kjzrgg"; depends=[rJava rkafkajars RUnit]; }; rkafkajars = derive2 { name="rkafkajars"; version="1.0"; sha256="0ss9gjjq92hba6nkhnda0pbm3a5bqm00hy0zbj4kivg5dlsf30q0"; depends=[rJava RUnit]; }; rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.4"; sha256="01c8fwnml1n0sw5lw9p2nz15i1zhxirr0kh39qvjmdiw97c1v1yq"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; + rlas = derive2 { name="rlas"; version="1.1.0"; sha256="1hdxkjvsqyng67fyf43ykh27xfi510cdy1i8y2dcrg31mwc7r9rs"; depends=[data_table Rcpp]; }; + rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; }; - rlist = derive2 { name="rlist"; version="0.4.6"; sha256="135zh1nrzlsk1rbzjj8al6zf6im9c7zy081ab0igrxlzsjlrama8"; depends=[data_table jsonlite XML yaml]; }; + rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; }; + rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; }; + rly = derive2 { name="rly"; version="1.4.2"; sha256="0mppl3y808k9ydn1lwng2bqmdzbbsla2p9p8qk73mp0xyq8iq9sm"; depends=[futile_logger R6]; }; rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; - rmarkdown = derive2 { name="rmarkdown"; version="0.9.5"; sha256="1zz98jxvw3lzva5kkj1n37gbhjwqd96gjs04y6h37pqy6qmkhk8c"; depends=[caTools htmltools knitr yaml]; }; + rmapshaper = derive2 { name="rmapshaper"; version="0.2.0"; sha256="0s5av8hic3b61ch6skvcxkpn9s2r0ylfxilxg8i2dvg4dk13qkna"; depends=[geojsonio geojsonlint readr rgdal sp V8]; }; + rmarkdown = derive2 { name="rmarkdown"; version="1.3"; sha256="1vvxyf3zhyxx6k697lia299456hryp8nh3zr0fc27f3107a8mcjf"; depends=[base64enc caTools evaluate htmltools jsonlite knitr rprojroot yaml]; }; rmatio = derive2 { name="rmatio"; version="0.11.0"; sha256="0cmlh16nf3r94gpczq0j46g4dgjy9q1c647rqd9i14hvfrpxzcfa"; depends=[lattice Matrix]; }; - rmdformats = derive2 { name="rmdformats"; version="0.2"; sha256="1rnc9zz5yl0g3085g9akr410f7bwmyban98gr71kj71zabc5vwgq"; depends=[htmltools knitr questionr rmarkdown]; }; + rmcfs = derive2 { name="rmcfs"; version="1.2.2"; sha256="1fx50z8pb5z1i1gzs4v194k9fdiq40ny5ridxym9ykgqf82ncvsa"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; + rmcorr = derive2 { name="rmcorr"; version="0.1.0"; sha256="0hrlamr527r02vj86xsip5n7gilrb8y33fy0xi1lkc66hf714vgw"; depends=[mnormt psych pwr RColorBrewer]; }; + rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; + rmdformats = derive2 { name="rmdformats"; version="0.3.1"; sha256="0x0vh1mdxb00k6c2m09szpbx4rqhch8p5zslb5jmbbacslicr1sq"; depends=[bookdown htmltools knitr questionr rmarkdown]; }; + rmdshower = derive2 { name="rmdshower"; version="2.0.0"; sha256="0prxq0zakcm5lh1ki15d1d267yxr43295zcxigpy011lawccaglm"; depends=[rmarkdown]; }; rmeta = derive2 { name="rmeta"; version="2.16"; sha256="1s3n185kk0ddv8v6c7mbc7cpj6yg532r7is6pjf9vda7317rxywy"; depends=[]; }; - rmetasim = derive2 { name="rmetasim"; version="2.0.4.1"; sha256="03dndby95gvx3qfr2fhgar8vvls3ia2hc2xqlmgh977rgaqs7xd1"; depends=[ade4 ape gtools]; }; + rmetasim = derive2 { name="rmetasim"; version="3.0.5"; sha256="0a5pn146ds4biswh59kaddzryd80l54rhcaqsryhmv6pp4ywg5a1"; depends=[ade4 adegenet gtools pegas]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-0"; sha256="0brqjhplvzl0bgsi6x057rb2cg5x372i746dhddr013p1mx0rlcx"; depends=[Bessel ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; - rminer = derive2 { name="rminer"; version="1.4.1"; sha256="1rbs5k3jxjbxr3pdlg03591h8yy9nrg8zjq1kcnvmzgza2a25613"; depends=[adabag Cubist e1071 kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart]; }; + rminer = derive2 { name="rminer"; version="1.4.2"; sha256="1hjgcawjrwsf0nv2hlznr1cvpm445yyxc6cq28k2yzyivk74si34"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; rmngb = derive2 { name="rmngb"; version="0.6-1"; sha256="1wyq8jvzqpy1s6w0j77ngh5x2q7mpj0ib01m8mla20w6yr6xbqjk"; depends=[Hmisc]; }; - rmongodb = derive2 { name="rmongodb"; version="1.8.0"; sha256="035a76ak6wi21hdvgzzbggz0qnb53rrr2wfx97ngc8ijwhw8hjh7"; depends=[jsonlite plyr]; }; rmp = derive2 { name="rmp"; version="2.0"; sha256="1cs5ylh5z9mfj3r0yvxxd38ksna2dxk9nnfgqkry1kxibnd1b4ff"; depends=[]; }; - rms = derive2 { name="rms"; version="4.4-2"; sha256="18k7k5k4cy7l76wpdid1lkyjrfg7hs9v6vl6sz3r5y8iag0jklmg"; depends=[ggplot2 Hmisc lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; + rms = derive2 { name="rms"; version="5.1-0"; sha256="1ibbpdclxc5vayl7hz176xc03snklx6ymiqzmpvi09y3bv92qnrx"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; - rmumps = derive2 { name="rmumps"; version="5.0.1.8"; sha256="0awhrb29n8xib9hs6xhy5faz8rndrf29bxldxrwj8hnk2rr4bwvr"; depends=[Rcpp]; }; + rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; + rmumps = derive2 { name="rmumps"; version="5.0.1.11-1"; sha256="1apcn3pqv4fax784fjw2vkbqvkqh3xj3lp4sl59jsn6hbhm4zdnr"; depends=[Rcpp]; }; + rmutil = derive2 { name="rmutil"; version="1.1.0"; sha256="0f30afqbzrsgbnfpniwhbw4b8hlzc5zyaixvn9giggzwczfnf29k"; depends=[]; }; rnaseqWrapper = derive2 { name="rnaseqWrapper"; version="1.0-1"; sha256="1fa3hmwrpccf09dlpginl31lcxpj5ypxspa0mlraynlfl5jrivch"; depends=[ecodist gplots gtools]; }; - rnbn = derive2 { name="rnbn"; version="1.0.3"; sha256="05amrx12b7p4pca1wbysn1n2rxbg5r54mpmga4i3xlpijx9baj80"; depends=[httr]; }; - rncl = derive2 { name="rncl"; version="0.6.0"; sha256="067x05xg7bs271zjhylz3dcd9zan1ycmsh771gn06k9905rr2y71"; depends=[Rcpp]; }; - rneos = derive2 { name="rneos"; version="0.3-1"; sha256="00hyaq034d9rf03nwv0myryj3a6is08zn24d3i65kmv9aqicv569"; depends=[RCurl XML]; }; + rnaturalearthdata = derive2 { name="rnaturalearthdata"; version="0.1.0"; sha256="1z32j5lz2lb8xgpkr73majw22k0b49iazj6jjc7j4w9k4zxxa102"; depends=[sp]; }; + rnbn = derive2 { name="rnbn"; version="1.1.2"; sha256="1b4fx5pi0h8hlikxqk68jk1nimlsh3hp6qr1hb6y1jwq8xa4lyiw"; depends=[httr rgdal rgeos sp]; }; + rncl = derive2 { name="rncl"; version="0.8.2"; sha256="17inkk6ajdn1x6g253k2yjyivcryjwn903cd369h1bxlr80amqc0"; depends=[progress Rcpp]; }; + rneos = derive2 { name="rneos"; version="0.3-2"; sha256="0m5mmhwnrk9ifv91s5ngmlvqqd7bw1n7glzkgk5i72cw0siiwmh0"; depends=[RCurl XML]; }; rnetcarto = derive2 { name="rnetcarto"; version="0.2.4"; sha256="0fk5rym6zp049bl1f7bkl2231mjh3pgnxn0nhvmzpsah08rh4rr6"; depends=[]; }; rngSetSeed = derive2 { name="rngSetSeed"; version="0.3-2"; sha256="00mqjjkhbnvxqkf1kz16gipsf98q62vmhx9v8140qs7c4ljbhc3a"; depends=[]; }; rngWELL = derive2 { name="rngWELL"; version="0.10-4"; sha256="0ayrkd2yllsgl7iqqbhiyrnyyqk13f4wh1np23iz0zj650yjqdq8"; depends=[]; }; rngtools = derive2 { name="rngtools"; version="1.2.4"; sha256="1fcgfqrrb48z37xgy8sffx91p9irp39yqzxv7nqp1x2hnwsrh097"; depends=[digest pkgmaker stringr]; }; rngwell19937 = derive2 { name="rngwell19937"; version="0.6-0"; sha256="0m6icqf7nckdxxvmqvwfkrpjs10hc7l8xisc65q8iqpnpwl5p2f6"; depends=[]; }; - rnn = derive2 { name="rnn"; version="0.2.0"; sha256="1c8yx4604fdp9w1l3mcscig2206rwgbp43a1h753jpr8cqwdl75l"; depends=[]; }; - rnoaa = derive2 { name="rnoaa"; version="0.5.2"; sha256="08fr1d3nxiy3x1i1kb183nsl6ss5w75crykm54728dkij80jrrm2"; depends=[dplyr ggplot2 httr jsonlite lubridate scales tidyr XML]; }; - rnrfa = derive2 { name="rnrfa"; version="0.5.1"; sha256="0fr8yb5v0grcc55fc3i5sr80b0rm3vbicsy33g6pykgrzdrcppw4"; depends=[plyr RCurl rgdal rjson sp stringr XML2R zoo]; }; - robCompositions = derive2 { name="robCompositions"; version="2.0.0"; sha256="1y7jhvkj6wq4dkjfsl6f5la7kv3fshb02h8diyz4b4wv4yvkzis6"; depends=[cvTools data_table e1071 GGally ggplot2 MASS pls robustbase rrcov sROC VIM]; }; + rnn = derive2 { name="rnn"; version="0.8.0"; sha256="04924zn448x9rc3z9vh033l4rv9lz0hxv1bhfl0gn6gvd5wavlc7"; depends=[shiny sigmoid]; }; + rnoaa = derive2 { name="rnoaa"; version="0.6.6"; sha256="1b66jjvh6qk6xn0xfyd2prn4favhkfjmvi0qs76gdcxngy3kph2k"; depends=[dplyr ggplot2 gridExtra httr isdparser jsonlite lubridate rappdirs scales tibble tidyr XML xml2]; }; + rnpn = derive2 { name="rnpn"; version="0.1.0"; sha256="10xx8fxgdknv71ks42xxvf38xsmjy6s87y67wi21673v0n07fxb5"; depends=[data_table httr jsonlite plyr]; }; + rnrfa = derive2 { name="rnrfa"; version="1.3.0"; sha256="1zrj7y0qh57r7r9c5pspz238w0j1kaicd2l6vcg92lgxi8b9i558"; depends=[ggmap ggplot2 httr plyr rjson sp stringr xml2 xts]; }; + roahd = derive2 { name="roahd"; version="1.2"; sha256="1b38x7mrld4bnz04d2h3nlk7ksyja9pj9aa6d2k3p8i1k458aqqd"; depends=[robustbase scales]; }; + robCompositions = derive2 { name="robCompositions"; version="2.0.3"; sha256="0zm1qkrncp4k87mcbn72arr68xpif2y7f9m8smrcma4x52npfpfi"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp robustbase rrcov sROC VIM]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; robeth = derive2 { name="robeth"; version="2.7"; sha256="03pnwd3xjb9yv8jfav0s4l9k5pgpampp15ak7z0yvkjs20rvfq3d"; depends=[]; }; + robets = derive2 { name="robets"; version="1.1"; sha256="1wpgjw31il231am8bka6636rnlsk6kjly4v8755x191lywip6ck2"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1"; sha256="161rsqyy2gq1n6ysz0l4d4gqvxhs72hznc2d5hljxdaz3sbdzzig"; depends=[lattice MASS robustbase]; }; - robotstxt = derive2 { name="robotstxt"; version="0.1.2"; sha256="15a5k78mc5fpij3cvx8b0qyfglh2x357njm4ryxi230bwvszmqdw"; depends=[httr R6 stringr]; }; + robmed = derive2 { name="robmed"; version="0.1.1"; sha256="1716vzci0lmim4n28bc2pjky1shjxqrclgllj3hc4dzf8j22dxbz"; depends=[boot ggplot2]; }; + robotstxt = derive2 { name="robotstxt"; version="0.3.2"; sha256="01nff1m1hs30rzm6y92pi97cp33k2k8a1k11kqms54wkpkglyr55"; depends=[httr stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; - robumeta = derive2 { name="robumeta"; version="1.6"; sha256="13hwbl4pym3pkxxfbffhv22nn3f4spc6lb4gz1wxi9iha1s9ywi5"; depends=[]; }; + robumeta = derive2 { name="robumeta"; version="1.8"; sha256="0fqwif0rwrcfzzid8md2p9b04p7w2bk7asqjxnnag5ywf8f3aj6n"; depends=[]; }; robust = derive2 { name="robust"; version="0.4-16"; sha256="0psai9d6w7yi0wfm57cc7b2jd5i7wbk2xagrhnvhxknw0dwzf2jh"; depends=[fit_models lattice MASS robustbase rrcov]; }; robustDA = derive2 { name="robustDA"; version="1.1"; sha256="1yys6adkyms5r4sw887y78gnh97qqr7sbi5lxv5l9bnc4ggcfiz6"; depends=[MASS mclust Rsolnp]; }; + robustETM = derive2 { name="robustETM"; version="1.0"; sha256="1dlj79v08bls500lb81rya6vwx58h97rpq1sy9zwd3mfl9b6awp9"; depends=[]; }; robustHD = derive2 { name="robustHD"; version="0.5.1"; sha256="14v6l0appy206zx1jcv7m14r2z9g12dpkm6zxzv756rca2yj8fp5"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; }; - robustX = derive2 { name="robustX"; version="1.1-4"; sha256="1s2aav2jr22dgrl7xzk09yn9909k76kpiz271w5r1id6hpfprjwc"; depends=[robustbase]; }; - robustbase = derive2 { name="robustbase"; version="0.92-5"; sha256="0wsdgqbkr0amid71q52cij9wnyss2sh1fm75g8cp4d6dndh327rl"; depends=[DEoptimR]; }; + robustX = derive2 { name="robustX"; version="1.2-2"; sha256="0pgfq78qd8s40ciqval01bwajy6zfdjms1lbh0b5g0rww6920s6f"; depends=[robustbase]; }; + robustbase = derive2 { name="robustbase"; version="0.92-7"; sha256="13xz4am7y0s0kl5bmbcw3dlhl7ji8h9sjx56wsgmj6r9n35nrggw"; depends=[DEoptimR]; }; robustfa = derive2 { name="robustfa"; version="1.0-5"; sha256="04nk5ipml54snsmiqf5sbhx490i46gnhs7yibf4wscrsj1bh2mqy"; depends=[rrcov]; }; robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; }; - robustlmm = derive2 { name="robustlmm"; version="1.8"; sha256="0i6h5kndj53p0hcwyx0bp2h6d2hiajf2ycyvq00ajx5jspi8kv48"; depends=[ggplot2 lattice lme4 Matrix nlme robustbase xtable]; }; - robustloggamma = derive2 { name="robustloggamma"; version="0.4-31"; sha256="19ycdvpzns46gjnkddwznnszs0941blpss7l0cqligv91cz7bkjc"; depends=[robustbase]; }; + robustlmm = derive2 { name="robustlmm"; version="2.1-2"; sha256="0vgrbvjaix44rixmgd8ljjzvx669gdk5il0f2p8y37ak4s4d2n09"; depends=[ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; + robustloggamma = derive2 { name="robustloggamma"; version="1.0-2"; sha256="1cifyasrik010zs8jsz0kzzmwm3qmc0y7h2dahg2ibpwxfcqfcpq"; depends=[numDeriv RobustAFT robustbase survival]; }; + robustrank = derive2 { name="robustrank"; version="2016.11-9"; sha256="11x9smfkbq4f0p2n3gxhwzs2xsd019pilxrds601yshz754ccj98"; depends=[]; }; + robustrao = derive2 { name="robustrao"; version="1.0-1"; sha256="03bigs7sc7d6ah1dp3mrkklhwih80wbr841klilwkfkajp7q97h9"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-9"; sha256="1jjydpiz7wwyvivq7vbyrlyf6y9pd036p2xls0kkq7w1d3vpzjwk"; depends=[Matrix Rcpp RcppArmadillo]; }; + robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; }; robustvarComp = derive2 { name="robustvarComp"; version="0.1-2"; sha256="187mcpih509hx15wjjr7z2h6h76mz2v0d8xgsxjd8wz7l3dnlp2f"; depends=[GSE numDeriv plyr robust robustbase]; }; + rocNIT = derive2 { name="rocNIT"; version="1.0"; sha256="18vxyh1wcq6dv62xf2dyl4226cd00n4hlbaqnynl9j5gnrmmsvi1"; depends=[]; }; rocc = derive2 { name="rocc"; version="1.2"; sha256="00yxbbphhwkg4sj2h7pd9vw86yavl711nk8yylwmjd3qv39qjml0"; depends=[ROCR]; }; + roccv = derive2 { name="roccv"; version="1.0"; sha256="13pycz05x0d1azc28yc7569awikd9lidzhhsgljqgsxvazr8fg0i"; depends=[glmnet pROC]; }; rockchalk = derive2 { name="rockchalk"; version="1.8.101"; sha256="1aa0m3whvb190cyfl4177pfd2l1i1a0dz9rn2fxkvls393cssfmb"; depends=[car lme4 MASS]; }; - rococo = derive2 { name="rococo"; version="1.1.2"; sha256="08204y3g3xd2srpcpnbkq1laqfr3wrhy73whlxf83gffw8j0iyv8"; depends=[Rcpp]; }; + rococo = derive2 { name="rococo"; version="1.1.4"; sha256="08s21hhhzdaxbls2akd7sjyfl2nqpvpygpbj563584b399zfgxg2"; depends=[Rcpp]; }; rodd = derive2 { name="rodd"; version="0.2-1"; sha256="01zrkw4lr21vxk2grfc37iyrcipfdcj5m0i7gnxsvs435y9fqagd"; depends=[Matrix matrixcalc numDeriv quadprog rootSolve]; }; - rollply = derive2 { name="rollply"; version="0.4.2"; sha256="122c41rqc88ikxws251ddppah18ficir7p00x7wiynqplmhps3nl"; depends=[plyr Rcpp scales stringr]; }; - rootSolve = derive2 { name="rootSolve"; version="1.6.6"; sha256="0mn7nxdw1klfay7z12vl3k0ffq3i9p930fyiksjjgy4yz6hljxqx"; depends=[]; }; + rodeo = derive2 { name="rodeo"; version="0.7.1"; sha256="0q76dnwc5bixbl2wh6km7085rivfzjpzl6c3w48wq5b23k1v7pfr"; depends=[deSolve R6]; }; + rodham = derive2 { name="rodham"; version="0.0.3"; sha256="1rc3k2qsa1rb11fk0va635czslqk1nxpcykrqc5p225makisaxv1"; depends=[jsonlite plyr splitstackshape]; }; + roll = derive2 { name="roll"; version="1.0.6"; sha256="0123ihl9b4x65azbr4hvm69q53sh753mgf0j54wq98y0f8kx757v"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + rollbar = derive2 { name="rollbar"; version="0.1.0"; sha256="1q2ym0vkgbdnibxmwx0bp9c20g3bm8fzwwgs3j4bxg1ydg3gnkj4"; depends=[httr]; }; + rollply = derive2 { name="rollply"; version="0.5.0"; sha256="01rh4x9352ixdhrqdysapqx5ynksknyf8n230b340pxwaz2d7xhc"; depends=[plyr Rcpp stringr]; }; + rootSolve = derive2 { name="rootSolve"; version="1.7"; sha256="08ic6ggcc5dw4nv9xsqkm3vnvswmxyhnqnv1rdjv1h2gy1ivpcq8"; depends=[]; }; + rootWishart = derive2 { name="rootWishart"; version="0.3.0"; sha256="0jifnk6ysq0603pjjyn73gcib0yrlf8apk1isl8wm5xbqc91m859"; depends=[BH Rcpp RcppEigen]; }; + rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; + ropenaq = derive2 { name="ropenaq"; version="0.1.3"; sha256="1r3hp6y8wp397x8al5xx4ly4ydv40ln0s28db0cnnsi2arn4q4mb"; depends=[dplyr httr jsonlite lazyeval lubridate tidyr]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; - ror = derive2 { name="ror"; version="1.2"; sha256="0n8mk35rm3rp0c7a3i961kij21a177znh9hkq4snqqlw9vf50hdg"; depends=[igraph rJava ROI ROI_plugin_glpk]; }; - rorcid = derive2 { name="rorcid"; version="0.2.2"; sha256="0jnvc04br702027y3dhhjckd94lidvsj937cv5lvpb7fd8ahmx7z"; depends=[httr jsonlite]; }; - rorutadis = derive2 { name="rorutadis"; version="0.3.1"; sha256="06s2cnfhs4hffd2bzqp6542fqw37ha63d5sc25j9ch3ih42ja3cg"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; - rosm = derive2 { name="rosm"; version="0.1.3"; sha256="0a9shin62zlpc752jhyg72cshc7wwz6cp4br64ra4h86xdlwi3c4"; depends=[abind digest jpeg png rgdal rjson sp]; }; + rorcid = derive2 { name="rorcid"; version="0.3.0"; sha256="1c4di3cgx9b86v5fnsahf7gd1shb6klrg4mfyhf4irndn7b1r562"; depends=[httr jsonlite tibble]; }; + rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; + rosetteApi = derive2 { name="rosetteApi"; version="1.5.0"; sha256="1mwvqgfc6l1bqa8ik9nx6mk380hnrplbls8hc5yign8wqlw8rql5"; depends=[httr jsonlite]; }; + rosm = derive2 { name="rosm"; version="0.1.4"; sha256="1p15pmhv52fg8lc0c0yiadc7s0q9s0dz9q6d8544msaxsjwfkpxp"; depends=[abind digest foreach jpeg png rgdal rjson sp]; }; + rospca = derive2 { name="rospca"; version="1.0.0"; sha256="09rlkzajgs7sqdj5lwb0bs0vx6676qwqcwx1wawvg40npfw40l0h"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; rotationForest = derive2 { name="rotationForest"; version="0.1"; sha256="07my0i84jvmjxvg2ifvsrbc0r5z4s32xi0vfdwrkhhdzdn87h527"; depends=[rpart]; }; rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; }; - rotl = derive2 { name="rotl"; version="0.5.0"; sha256="0na3x13d2n5fahyxj5jp4v3j3clrcr6m9g4cig9d5dk6dhp3iv9d"; depends=[ape assertthat httr jsonlite rncl]; }; + rotl = derive2 { name="rotl"; version="3.0.1"; sha256="18dzg3ysy6aphwbj1c4hzr1qn8q3vvr5r0qnpmidr5rwyhc78phb"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; roughrf = derive2 { name="roughrf"; version="1.0"; sha256="0nwdynqfb9yzjvi1lykgdkch3b4g09aj8vbd6sf5pyx473s066y4"; depends=[mice nnet randomForest]; }; - rowr = derive2 { name="rowr"; version="1.1.2"; sha256="1hvj17n3fy1jaaz551s1icjv1kgr2s22xvg4fllzs8hpgdsybp1j"; depends=[]; }; - roxygen2 = derive2 { name="roxygen2"; version="5.0.1"; sha256="19gblyrrn29msbpawcb1hn5m1rshiqwxy0lby0vf92rm13fmsxcz"; depends=[brew digest Rcpp stringi stringr]; }; + rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; + roxygen2 = derive2 { name="roxygen2"; version="6.0.1"; sha256="0xpzziminf225kjwhyl51kgkzhplyzhk5farhf5s822krl2xqbfj"; depends=[brew commonmark desc digest R6 Rcpp stringi stringr xml2]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; rpanel = derive2 { name="rpanel"; version="1.1-3"; sha256="1wm0dcbyvxz4ily8skz2yda44n74x2nmc4pg11ja0yvk038gjfns"; depends=[]; }; rpart = derive2 { name="rpart"; version="4.1-10"; sha256="119dvh2cpab4vq9blvbkil5hgq6w018amiwlda3ii0fki39axpf5"; depends=[]; }; - rpart_plot = derive2 { name="rpart.plot"; version="1.5.3"; sha256="18kif26aviyd217dlq5sajfa13acn8nqccrwnl1wy731hsnfv4gf"; depends=[rpart]; }; + rpart_plot = derive2 { name="rpart.plot"; version="2.1.1"; sha256="0bxn67an7xkg2cml32kll3gwzbs87hzia1jkx0dwg7vmkkvm1ab3"; depends=[rpart]; }; rpart_utils = derive2 { name="rpart.utils"; version="0.5"; sha256="00ahvmly6cdf7qhhcic0dbjlljqq8kbhx15rc7vrkd3hzd55c0im"; depends=[rpart]; }; rpartScore = derive2 { name="rpartScore"; version="1.0-1"; sha256="15zamlzbf6avir8zfw88531zg5c0a6sc5r9v5cy9h08ypf34xf4y"; depends=[rpart]; }; rpartitions = derive2 { name="rpartitions"; version="0.1"; sha256="1gklsi4pqhk16xp9s49n1lr9ldm1vx61pvphjqsqkzrlxwcpx3j8"; depends=[hash]; }; rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; - rpdo = derive2 { name="rpdo"; version="0.1.1"; sha256="0kq53mlr6i65s8lqj5nk8nvadqxd8hw4rx1vg8c6p5kvnl6pmawn"; depends=[]; }; - rpf = derive2 { name="rpf"; version="0.51"; sha256="0hsghv26jbv3alvyrh9bkgx97mjbvd21zjv9n1q63d6d3drxc6rc"; depends=[mvtnorm RcppEigen]; }; - rpg = derive2 { name="rpg"; version="1.4"; sha256="0sisn5l1qxlqg6jq4lzr7w3axkaw5jlpz8vl9gp2hs0spxsjhcyn"; depends=[RApiSerialize Rcpp uuid]; }; - rphast = derive2 { name="rphast"; version="1.6"; sha256="0ni8969bj3pv0wl8l0v352pqw2d5mlshsdw1rb6wlxk7qzfi5cl2"; depends=[]; }; - rpivotTable = derive2 { name="rpivotTable"; version="0.1.5.7"; sha256="1qqx417bgf5dcbvssp7y8b5zz66ipwdpv18pgndj92rx53h81g18"; depends=[htmlwidgets]; }; - rplexos = derive2 { name="rplexos"; version="1.1.4"; sha256="1q9vlxhglmrwxh9g4wq98nc321kq7jhgkykp9hwl3bd26a1jcfjp"; depends=[data_table DBI doParallel dplyr foreach lubridate Rcpp RSQLite stringi tidyr]; }; - rplos = derive2 { name="rplos"; version="0.5.6"; sha256="0h8k2di868h49hxwww8nz093viqfd48q3jhmlk33yfgs44sm20hj"; depends=[dplyr ggplot2 httr jsonlite lubridate plyr reshape2 solr whisker]; }; - rplotengine = derive2 { name="rplotengine"; version="1.0-5"; sha256="1wwpfnr5vi8z26alm8y5gply0y4iniagimldzy2z696djzz8p8p8"; depends=[xtable]; }; - rpnf = derive2 { name="rpnf"; version="1.0.4"; sha256="0cpn23qngjx6m33f3kwflabxdhs06r2mnlh9a6adw4fvvizxnki4"; depends=[]; }; - rportfolios = derive2 { name="rportfolios"; version="1.0"; sha256="1zcv5ddmk15l0p03nlffimlhhpcc7l1c05xl2d1xlfk58rkvqns6"; depends=[]; }; + rpdo = derive2 { name="rpdo"; version="0.2.1"; sha256="0n2lpnphnb5h7y9jszq4m15wymwgv7v2pw5fwbflr0ihvx3i3iac"; depends=[curl datacheckr dplyr lubridate magrittr readr stringr tidyr]; }; + rpf = derive2 { name="rpf"; version="0.53"; sha256="16d28i8s7f6ag1jvxw1ns8pi3s1rbxp9z9l13bxsm6cd6kq5jgrq"; depends=[mvtnorm RcppEigen]; }; + rpg = derive2 { name="rpg"; version="1.5"; sha256="0hjfzikaryr55xjfw7zjdby4ja59rxq9ikycgbpapvpy2q9py5yp"; depends=[getPass RApiSerialize Rcpp uuid]; }; + rphast = derive2 { name="rphast"; version="1.6.5"; sha256="1jff94hx7skvd6icbrcyabsvz80sgqqv28vz91mcz5jh6v6afhl3"; depends=[]; }; + rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; + rpivotTable = derive2 { name="rpivotTable"; version="0.1.5.20"; sha256="1aqk0afw2vjb7d75n9imp0dc3nq1w94n3r9fd3k1zsmia8ds8dh3"; depends=[htmlwidgets]; }; + rplexos = derive2 { name="rplexos"; version="1.1.11"; sha256="0i0yiiy84d6qgx70ib0rf0hr0jb6naw6d6w8lvsl104c3m23sf4q"; depends=[data_table DBI doParallel dplyr foreach lubridate Rcpp RSQLite stringi tidyr]; }; + rplos = derive2 { name="rplos"; version="0.6.4"; sha256="0jqvm212clh02g9sk239l467xg0b83c1zbnhfwgzmvbvk630na1b"; depends=[dplyr ggplot2 httr jsonlite lubridate plyr reshape2 solr whisker]; }; + rplotengine = derive2 { name="rplotengine"; version="1.0-6"; sha256="1x9lf5h6cmjyi5xyvmk2ii2dwkwmjqbg0m1fhfabay0flqc7qdm0"; depends=[xtable]; }; + rpms = derive2 { name="rpms"; version="0.2.0"; sha256="15l7n9qddzk71s0si0mxmpzvl2h0sdb2z2x058cif4i4kgly9h7d"; depends=[Rcpp RcppArmadillo]; }; + rpn = derive2 { name="rpn"; version="1.0"; sha256="0wk8y4yk6wqzbq5bqv6zncfp9az5vn8xgwh426pk3bxm3v4xi16i"; depends=[BBmisc checkmate]; }; + rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; + rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; }; + rpostgis = derive2 { name="rpostgis"; version="1.1.1"; sha256="0bir893izyx8791m39fm9ykwdp9a6n3mgphx80i7gs0wsw5z7bv3"; depends=[DBI raster rgeos RPostgreSQL sp]; }; + rpostgisLT = derive2 { name="rpostgisLT"; version="0.4.0"; sha256="108payblzqiqy4i4w5hwv2v45rmhw1lylkc8mdkfyg64cx7kl7pp"; depends=[adehabitatLT DBI rpostgis RPostgreSQL sp testthat]; }; + rpql = derive2 { name="rpql"; version="0.5"; sha256="1d5mr04jk08l617zkqn13njglwj0w9an1rix937bcxw69blshahi"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm]; }; + rprev = derive2 { name="rprev"; version="0.2.3"; sha256="14p79f0mkvgwk8bwjnr7gvkvs8c632z7hddcyyrwldpilwyjnsgc"; depends=[doParallel dplyr foreach ggplot2 lazyeval magrittr rms survival tidyr]; }; rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; + rprojroot = derive2 { name="rprojroot"; version="1.2"; sha256="1fgyxv1zv04sllcclzz089xl6hpdzac7xk61l0l4acb7rqsx5d18"; depends=[backports]; }; + rpsftm = derive2 { name="rpsftm"; version="1.0.2"; sha256="0h539wdj255fynwhjvv7kzl8pfwfvqiji35bp3h55m5q09w77n98"; depends=[ggplot2 survival]; }; rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; - rpubchem = derive2 { name="rpubchem"; version="1.5.0.2"; sha256="0lvi7m8jb2izsfia3c0qigsd1k1x9r02gymlwfg29pb8k10lwcjf"; depends=[car RCurl RJSONIO XML]; }; - rqPen = derive2 { name="rqPen"; version="1.3"; sha256="1hm4nh9afjwa601qysbjl6ipbal5rmmr8z5nn3f9bxd5nlgwzm0r"; depends=[quantreg regpro]; }; - rr = derive2 { name="rr"; version="1.3"; sha256="00m5h01j3qb83s7bcjp4xx6pf16hjjhl0qryb929cnxn1ln0ddns"; depends=[arm coda MASS]; }; + rptR = derive2 { name="rptR"; version="0.9.1"; sha256="0vwwdr0z1yyajisiy4ib1zksl0s1wjqf4pp9ymy8g5gnn1j2dx8i"; depends=[lme4 pbapply]; }; + rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; + rqPen = derive2 { name="rqPen"; version="1.5.1"; sha256="10lmbxz5wsfczxr1n8hclvschqm9mfzdgdac5r0b87a2xglqrizv"; depends=[quantreg regpro]; }; + rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.4"; sha256="0h0mqfb524kglaibgj4d0g05lrnzgz6x87irs31dwl28j4kxcz4w"; depends=[]; }; rrBlupMethod6 = derive2 { name="rrBlupMethod6"; version="1.3"; sha256="1qwv954mhry46ff2ax48xcmnasygi5alv8d413g3qbk2da6i0d8l"; depends=[]; }; - rrcov = derive2 { name="rrcov"; version="1.3-11"; sha256="0ixn2ly8p5wkdbd1fmpa0p22jxvmxiigpii4ia8vnhjnclm7jmin"; depends=[cluster lattice mvtnorm pcaPP robustbase]; }; - rrcovHD = derive2 { name="rrcovHD"; version="0.2-4"; sha256="020d9ip91azprr4hf5k2gyhlv6g6zkzmaa22fysq3hyacxymksib"; depends=[pcaPP pls robustbase rrcov spls]; }; - rrcovNA = derive2 { name="rrcovNA"; version="0.4-8"; sha256="1xhzy0gyiwhaklq1b9arxqpljfz08bwlhjw7xsjz7zjb650y3rw8"; depends=[cluster lattice norm robustbase rrcov]; }; + rrcov = derive2 { name="rrcov"; version="1.4-3"; sha256="0kagqggi634mvrhd67ia7mpjrj5v6w2wq0z3kyppg5xkvzh335nq"; depends=[cluster lattice mvtnorm pcaPP robustbase]; }; + rrcovHD = derive2 { name="rrcovHD"; version="0.2-5"; sha256="1wv50lcjf0fsxb1zagxbrcx68ilfmnmkc8ccpy9hw3qql5p368ij"; depends=[pcaPP pls robustbase robustHD rrcov spls]; }; + rrcovNA = derive2 { name="rrcovNA"; version="0.4-9"; sha256="1qc9xqm5x55dqjx1y7s4a2nwc07v32rygicbb8469knxasf92cs3"; depends=[cluster lattice norm robustbase rrcov]; }; + rrecsys = derive2 { name="rrecsys"; version="0.9.5.4"; sha256="0g3mz5k1ya72qc32wwh8hy809yzxigz8rkcp9rnxdr71fk604a04"; depends=[knitr MASS proxy registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; - rredlist = derive2 { name="rredlist"; version="0.1.0"; sha256="1ivxmb0jwwip7s4gglw4v4wsfzird7gvll8zcgpvwsi3mj5jqibp"; depends=[httr jsonlite]; }; - rrepast = derive2 { name="rrepast"; version="0.3"; sha256="133ip1fxj8z76v0ny02mw7wbqjsmqsxbha6zsi4db4cxnilq8hai"; depends=[digest lhs rJava xlsx]; }; - rriskDistributions = derive2 { name="rriskDistributions"; version="2.1"; sha256="1sc0bj5sivclbq0grif99vclnlhg1k9dz4xdvng6vv392xkwbmfd"; depends=[eha mc2d msm tkrplot]; }; + rredlist = derive2 { name="rredlist"; version="0.3.0"; sha256="1w59rqwgx3hr9icw8pzwc95117vrqkj3mq197kp0qy8xbkf83h8v"; depends=[crul jsonlite]; }; + rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; }; + rrepast = derive2 { name="rrepast"; version="0.5.0"; sha256="1df6dgbfrh9ks4z22lm25m8v2baq78nq32f8v1cfkq1ygr6n2k99"; depends=[digest ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; + rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.1"; sha256="0zr3c84248myizrf3gmwkkybzlhk65j97dhg77cv2hbr7sdbjz2b"; depends=[eha mc2d msm tkrplot]; }; rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; + rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; - rscala = derive2 { name="rscala"; version="1.0.9"; sha256="024k3jivl2zvwnlamlsc34bqw7v0rj1psvypykq6lls60frr9cg8"; depends=[]; }; + rscala = derive2 { name="rscala"; version="1.0.15"; sha256="1gx3xqz505l5kw5hwgkjbsm0aj5p3ycghjmfqcihsxpvai7hzlza"; depends=[]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; - rsconnect = derive2 { name="rsconnect"; version="0.4.2"; sha256="04j2826264nvgwlbi68827cn3gah97bwmxn6yxrdpa4j1khmnj7g"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; }; - rscopus = derive2 { name="rscopus"; version="0.1.2"; sha256="178ymgywq7fmv8gicrkhcqw40f6wxiqq6zhlc1zilcr0rf6lvx6x"; depends=[httr]; }; + rsconnect = derive2 { name="rsconnect"; version="0.7"; sha256="104c83qq12kp1hzfs7k6nzlripsydwidqgdd3kakc4wy6dsr8bhn"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; }; + rscopus = derive2 { name="rscopus"; version="0.4.6"; sha256="0s8ahdp884yy2hpa5kq9d4kcnr0hx662wp7h0qi399pc0y1rydwm"; depends=[httr plyr]; }; + rscorecard = derive2 { name="rscorecard"; version="0.3.5"; sha256="1fhcp8xdhgjgpbfwc6bygq0z1z49w9c3bh12s8rml30597b8gc26"; depends=[dplyr jsonlite lazyeval magrittr]; }; rscproxy = derive2 { name="rscproxy"; version="2.0-5"; sha256="1bjdv7drlnffcnyc0j8r22j7v60k1xj58bw8nk9l8wvnmngrjz86"; depends=[]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; - rsdmx = derive2 { name="rsdmx"; version="0.5-3"; sha256="13wdzpyv15p4a92lclb6jg3lm1hnyaa8wqnngm1qyam3dhwfi9k0"; depends=[plyr RCurl XML]; }; + rsdmx = derive2 { name="rsdmx"; version="0.5-8"; sha256="0f0hc2v9g7gxqcfhx3m7fawsvlba3jx666f675263d8vhdc9f311"; depends=[plyr RCurl XML]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; rsggm = derive2 { name="rsggm"; version="0.3"; sha256="17yzvd5vs2avp0nzk7x9bi4d7p6n9nv7675qpgfpwkfqp25lax73"; depends=[glasso MASS Matrix QUIC]; }; rsig = derive2 { name="rsig"; version="1.0"; sha256="129k78i8kc30bzlphdb68vv3sw2k6xyiwrhw08vhzz6mf3jxlqsh"; depends=[BBmisc glmnet Matrix superpc survcomp survival]; }; - rsm = derive2 { name="rsm"; version="2.7-4"; sha256="0j520dhklfbd9mh90181lxjsvasgyc0zzi6z6ahybwhffwqczz42"; depends=[]; }; + rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; }; + rslurm = derive2 { name="rslurm"; version="0.3.1"; sha256="1mvs64g9j1ml8as18na39app1n8lk3m1qgki68nhkas81bmiq24a"; depends=[whisker]; }; + rsm = derive2 { name="rsm"; version="2.8"; sha256="1hnlaj5jwqxki07b1kzl716qkmqwap57cch2lwsb6gqqsjir8xfx"; depends=[estimability lsmeans]; }; rsml = derive2 { name="rsml"; version="1.3"; sha256="0a1y41jq0yzr19mb2scwhlp9gx5vngm4q12yxp1fcwk2cqhnsda6"; depends=[rgl XML]; }; - rsnps = derive2 { name="rsnps"; version="0.1.6"; sha256="1pqdmg1cwpm0cvr5ma7gzni88iq5kqv1w40v8iil3xvcmns8msjk"; depends=[httr jsonlite plyr RCurl stringr XML]; }; + rsnps = derive2 { name="rsnps"; version="0.2.0"; sha256="10g1b2i2mp0b4p78iiy83sz2jwz73xfjkhc6ih4ag2wmbdmwf9pb"; depends=[httr jsonlite plyr stringr XML]; }; rspa = derive2 { name="rspa"; version="0.1.8"; sha256="1zgk1v1yk9c51wbsl3skqfrznqj84146dzfwg7q3jy2hpdgf1cg6"; depends=[editrules]; }; + rsparkling = derive2 { name="rsparkling"; version="0.1.0"; sha256="15yz4z96hbl18l2n3vz7mcamwvh7zkqbhlhdmyi002bsc1jd97s9"; depends=[h2o sparklyr]; }; + rsq = derive2 { name="rsq"; version="0.6"; sha256="0qc5mkz7b68al3iahsbv45imkzabbsykd95w1yd7gfcrw0qk592m"; depends=[]; }; + rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; - rstan = derive2 { name="rstan"; version="2.9.0-3"; sha256="0ps6a9fqvrm6p8s5g10373hfqrx58vmvg1w4rghz5v8wshjc9ij4"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; - rstanarm = derive2 { name="rstanarm"; version="2.9.0-3"; sha256="0sh1xv0848c0sil1qrjdn8hgv2hr40nmz4knz63mnr3i5j8fzy00"; depends=[BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan shinystan StanHeaders]; }; - rstatscn = derive2 { name="rstatscn"; version="1.0.2"; sha256="0gq4ybymlpvzr5gkxlc877jwczh034b5gxmzhy8pcqhai6jsq42y"; depends=[httr jsonlite]; }; + rstan = derive2 { name="rstan"; version="2.14.1"; sha256="035gph171z3ydl321a46p9rl5dbzaw5vn4qa7mj20dmvg90py99k"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; + rstanarm = derive2 { name="rstanarm"; version="2.14.1"; sha256="0hwiqn4swwg3b3g4szkrc1srqiibn227sb7rcqknh9fs6b8b78s5"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders]; }; + rstantools = derive2 { name="rstantools"; version="1.1.0"; sha256="14kf5faz7n7r08dxsd4dw6as63lbb2fsyqiknn48fh2kp36ykpwj"; depends=[]; }; + rstatscn = derive2 { name="rstatscn"; version="1.1.1"; sha256="0aj4x3lyrldpgh90v90qbxylndacn5ri5yqff3qy53q45ar7yji3"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="0.10"; sha256="0b2sdgpb3hzal34gd9ldd7aihlhl3wndg4i4b3wy6rrrjkficrl1"; depends=[]; }; - rstpm2 = derive2 { name="rstpm2"; version="1.3.1"; sha256="0fflgp17gfav7q7yv3x1g74s9r5fhzr52mrmjl9p6hc7q6m2frzl"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; }; + rstpm2 = derive2 { name="rstpm2"; version="1.3.4"; sha256="0vm5w597lz3zzklm21avxm88lqgrn9k2hlfh4yvmqk4vmwp4qkcc"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; }; rstream = derive2 { name="rstream"; version="1.3.4"; sha256="1sgwk9mh3v3vv8gm537hfng6p2sqafd9ykraiw00s0z60fa80jnx"; depends=[]; }; - rstudioapi = derive2 { name="rstudioapi"; version="0.5"; sha256="0sgnqfx0m3hzh57k10s7ndrbw7yqjjjcgfikafya98jcc7wmpwym"; depends=[]; }; + rstudioapi = derive2 { name="rstudioapi"; version="0.6"; sha256="1zkvz72z6nw0xc8bhb21y5x1nk6avijs0w8n4vsbvw9sn76wc96s"; depends=[]; }; rsubgroup = derive2 { name="rsubgroup"; version="0.6"; sha256="1hz8rnbsl97ch6sjwxdicn2sjyn6cajg2zwmfp03idzpb3ixlk7l"; depends=[foreign rJava]; }; rsunlight = derive2 { name="rsunlight"; version="0.4.2"; sha256="1m4ya960zjqxbjcjj42gjmdy40ac7m471fkfsd0r6w675qbiiw87"; depends=[httr jsonlite plyr stringr]; }; - rsvd = derive2 { name="rsvd"; version="0.3"; sha256="0439s19fn01iihsapzzbmq72v4brsmqypxgdhxswhj9qq3y8ikhc"; depends=[]; }; - rsvg = derive2 { name="rsvg"; version="0.5"; sha256="0db0s3flyl1w1wzr9pbnpakz1zi1ssh4mgjpspkjphpqahix27qa"; depends=[]; }; + rsvd = derive2 { name="rsvd"; version="0.6"; sha256="0vrsgxbbk5n51i1s80bixcxph2ws86zpbdqs81yfvnzghrc99nas"; depends=[]; }; + rsvg = derive2 { name="rsvg"; version="1.0"; sha256="1584g43jx21d2di6zn4ra5j916a5bqzpni223prwn3nii5244f3x"; depends=[]; }; + rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; rtable = derive2 { name="rtable"; version="0.1.5"; sha256="1a9x0qcbp96wg86nbvx25yh5viwvf5sqb41z3cvr5i7br2ji8n5i"; depends=[knitr ReporteRs shiny tidyr xtable]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; - rtdists = derive2 { name="rtdists"; version="0.2-6"; sha256="1f2yv4qq27i1fc0ys3kk31lsnbdzrmrk44widnxd19hxn4r05cs6"; depends=[evd gsl msm]; }; + rtdists = derive2 { name="rtdists"; version="0.6-6"; sha256="173yzgvzcfdhkk4zf1d8cxnk707dbr6n5fpwzhcn4qx35sgq26jd"; depends=[evd gsl msm pracma]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; + rtext = derive2 { name="rtext"; version="0.1.20"; sha256="0455rwfxmpgb4qb925ildqr4km4ndgqjxgvk90x2dhfivgmmn60k"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-11"; sha256="04z0s5l9qjlbqahmqdaqv7mkqavsz4yz25swahh99xfwp9plknfl"; depends=[R_methodsS3 R_oo]; }; - rtfbs = derive2 { name="rtfbs"; version="0.3.4"; sha256="1z5rhxgi44xdv07g3l18ricxdmp1p59jl8fxawrh5jr83qpcxsks"; depends=[rphast]; }; - rticles = derive2 { name="rticles"; version="0.1"; sha256="17fbwarchnxvbk2fsb2hyifdhnaj05pl5ia32j5yd7pyi848mpvv"; depends=[knitr rmarkdown yaml]; }; + rtfbs = derive2 { name="rtfbs"; version="0.3.5"; sha256="0sdxlw1pkwwlzz2zcw4v8zhlm97lw2j5hbkqssialpa53jwyibyc"; depends=[rphast]; }; + rticles = derive2 { name="rticles"; version="0.2"; sha256="09cc0xfsvraw2vxl3icql8060nw4136cbp2iicm0bhhrvyxpvl5r"; depends=[knitr rmarkdown yaml]; }; + rtide = derive2 { name="rtide"; version="0.0.3"; sha256="0zbm4mza5093ixwaiza16lr1wd92fpgrl9ixxsmp0whnl4g2mwl2"; depends=[abind datacheckr dplyr lubridate magrittr plyr stringr tibble tidyr]; }; rtiff = derive2 { name="rtiff"; version="1.4.5"; sha256="0wpjp8qwfiv1yyirf2zj0696zb7m7fpzn953ii8vbmgzhakgr8kw"; depends=[pixmap]; }; rtimes = derive2 { name="rtimes"; version="0.3.0"; sha256="141i8zjsdzk7jdjf9wf3pa6d9ixjg1m4chk44iznmjpig4gbq2n9"; depends=[dplyr httr jsonlite]; }; - rtkore = derive2 { name="rtkore"; version="1.0.1"; sha256="0wk3v7xzmkmmag09dc08812g75a129ycn1107hvzqcpqlwma3n2n"; depends=[Rcpp]; }; - rtkpp = derive2 { name="rtkpp"; version="0.9.2"; sha256="09x98mgbz3a9vn59qarzsfml5qaw9mz2hg36sn8z1pgpjq7a75sp"; depends=[Rcpp]; }; - rtop = derive2 { name="rtop"; version="0.5-5"; sha256="05yygg85f981x2amf9y8nr4ymya3pkwlig8i1rf9b49jx11h5w8j"; depends=[gstat sp]; }; - rts = derive2 { name="rts"; version="1.0-10"; sha256="0fvs82n8lxbm4n8w22ahx7j38xhaafwvr3sqr3lrfni2cs346pzs"; depends=[raster sp xts zoo]; }; - rtson = derive2 { name="rtson"; version="1.1"; sha256="158dzs9wzb12k3hpkpz7jjhjdbr23j05rfyav1zn18hg43i5wbv3"; depends=[R6]; }; + rtip = derive2 { name="rtip"; version="1.0.0"; sha256="1xkw0m4fnwbsqqyhvxhsia3hlpjb2qhs6y0c4g7f7qa7f0ibcbja"; depends=[boot ggplot2 mvtnorm plyr]; }; + rtk = derive2 { name="rtk"; version="0.2.4.1"; sha256="1k1h5v0610bnxpz3fciim0ixjlrjzqlhx9h8b8zsz306l84bnxy8"; depends=[Rcpp]; }; + rtkore = derive2 { name="rtkore"; version="1.2.0"; sha256="1kchqxjyqz5vz3kfljvjhx42yahc58m99ifv8yijlffi68k486vl"; depends=[Rcpp]; }; + rtop = derive2 { name="rtop"; version="0.5-10"; sha256="0h35f3wpvsdvvymb2sl8g2wljzqzgis66bkf42njhxry7wavqf17"; depends=[gstat rgdal sp]; }; + rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; + rtrie = derive2 { name="rtrie"; version="0.1.1"; sha256="092ir1bm193x8ah2zbyik6vfavdqwzkda5kx4m7mv1gxcy4s64vr"; depends=[]; }; + rtrim = derive2 { name="rtrim"; version="1.0.1"; sha256="134j5sv9dvcq1n37rry7615nr3pa54by6r7ss7fagcmy4lnma2ps"; depends=[]; }; + rts = derive2 { name="rts"; version="1.0-18"; sha256="1dryx7pb86b6d0z271girvl3k9ahxv0llxcmaypk9x077gzyxx94"; depends=[raster sp xts zoo]; }; + rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; + rtweet = derive2 { name="rtweet"; version="0.4.0"; sha256="19sb8l7xllicagy8i1rwxkfbbl9klv3m9kkxvlc3slg1j3aprvpz"; depends=[httr jsonlite magrittr openssl]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; + rtypeform = derive2 { name="rtypeform"; version="0.2.0"; sha256="08hrhdd7zabga7338pvkkcy47kkvc2nbqb2v0sp3r4jqg7438a07"; depends=[httr jsonlite]; }; rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; }; + rucrdtw = derive2 { name="rucrdtw"; version="0.1.1"; sha256="1531i3n3a0hj6smi6lbhqx9zk4rf3zyi6nhaihcgp3sb9vk7zdlf"; depends=[Rcpp]; }; rugarch = derive2 { name="rugarch"; version="1.3-6"; sha256="0ysycv0qldp4dnj8yh22v860d40ycp2c0la87zblgl86r7g4f03b"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; }; - runjags = derive2 { name="runjags"; version="2.0.2-8"; sha256="00jqaz68mr3jmi7ifklwyjsh7jaxbk6pc1fxprgz29nbc1r7hi0r"; depends=[coda lattice]; }; - rusda = derive2 { name="rusda"; version="1.0.6"; sha256="1ziinga40jxnh7c8yd6vmryl7kpk62fr87p3ilv41rvfgw3rsl3v"; depends=[foreach httr plyr stringr testthat XML]; }; + runjags = derive2 { name="runjags"; version="2.0.4-2"; sha256="035sxmh0b0m6dwz8qbpsmw2p7ihkx3cxgkhj27i0j6dsjryl3x4p"; depends=[coda lattice]; }; + rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; + rust = derive2 { name="rust"; version="1.1.0"; sha256="0ii7a4cygzx5ww064papwxcby0j9maw4rjf40z1jgr6xr5x0dfny"; depends=[spatstat]; }; ruv = derive2 { name="ruv"; version="0.9.6"; sha256="12zi775nx6k1j9sz691x6r9r0arfnhwddf5nxbr1xk25dj9qa210"; depends=[]; }; rv = derive2 { name="rv"; version="2.3.1"; sha256="0bjqwk7djl625fws3jlzr1naanwmrfb37hzkyy5szai52nqr2xij"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvalues = derive2 { name="rvalues"; version="0.6"; sha256="075lfbqjzi103wh87i78x914iyrvrmmdz8z9f6391rbpip6bjpr3"; depends=[]; }; - rversions = derive2 { name="rversions"; version="1.0.2"; sha256="0xmi461g1rf5ngb7r1sri798jn6icld1xq25wj9jii2ca8j8xv68"; depends=[curl xml2]; }; - rvertnet = derive2 { name="rvertnet"; version="0.4.1"; sha256="1x24l83m00rd10hcy2mnzpwlkpk92zfw3gcxiwghpijy04azkiy9"; depends=[dplyr ggplot2 httr jsonlite maps plyr]; }; - rvest = derive2 { name="rvest"; version="0.3.1"; sha256="12mh9jbfy6ykx89kb475gk99i0jaxja6jk7pd6d9iz0kbfywnm7f"; depends=[httr magrittr selectr xml2]; }; - rvg = derive2 { name="rvg"; version="0.0.8"; sha256="0dbqzaxhabq0qn6clj46mb6a9cawz3pkmnksrhqbslq7x2y5wcp8"; depends=[gdtools R_utils Rcpp xml2]; }; + rvcheck = derive2 { name="rvcheck"; version="0.0.5"; sha256="045anzzp3laavxm3sqnyfnnc13nhryv15w63qawr9y81alg91397"; depends=[devtools]; }; + rversions = derive2 { name="rversions"; version="1.0.3"; sha256="0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"; depends=[curl xml2]; }; + rvertnet = derive2 { name="rvertnet"; version="0.5.0"; sha256="0bvf76i11kkjdy0vvx2fbv478nbzybljsw40l9mg3i9dcdmz3gjc"; depends=[dplyr ggplot2 httr jsonlite maps]; }; + rvest = derive2 { name="rvest"; version="0.3.2"; sha256="04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"; depends=[httr magrittr selectr xml2]; }; + rvg = derive2 { name="rvg"; version="0.1.2"; sha256="173fklnnizbh475qk9k7ff9zk96j1ljnbyhj8p494ys3jk4na0hw"; depends=[gdtools R_utils Rcpp xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; + rvsel = derive2 { name="rvsel"; version="0.2.1"; sha256="04whdpn0cg60y7f744qlxg60hczww7asq3c8kmf379xxf5p5zdpq"; depends=[]; }; + rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; }; rwfec = derive2 { name="rwfec"; version="0.2"; sha256="0wmalfms59zi8jdn2s2qbcdckfkifl9vg19hzx4389mm5gk6qsbh"; depends=[Rcpp]; }; rwirelesscom = derive2 { name="rwirelesscom"; version="1.4.3"; sha256="1q4s9m9k6i7x2vq5dwq7950sbq03i8ff6qk8l30x77689kpflqcb"; depends=[ggplot2 Rcpp]; }; rworldmap = derive2 { name="rworldmap"; version="1.3-6"; sha256="1q1h0n9qr0m5pdx10swrh9ddsvdj8kv5nqngrf3lnx9rg9iwivjk"; depends=[fields maptools sp]; }; rworldxtra = derive2 { name="rworldxtra"; version="1.01"; sha256="183z01h316wf1r4vjvjhbj7cg4xarn4b8qbmnn5y7nrrdndzi163"; depends=[sp]; }; rwt = derive2 { name="rwt"; version="1.0.0"; sha256="112wp682z4gkxsd3bqnlkdrh42bfzwnnhzyangxi2dh0qw63bgcr"; depends=[matlab]; }; + rwty = derive2 { name="rwty"; version="1.0.1"; sha256="1w66jlcbn8javlr2l0qinah3cxxadpjzvbz088saysyg277ikfxm"; depends=[ape coda GGally ggdendro ggplot2 phangorn plyr reshape2 viridis]; }; rwunderground = derive2 { name="rwunderground"; version="0.1.0"; sha256="10m0wgym6rdrgvmhh79q4jf0lh8wlrg04mvq0yvgnqfgcxn4rmir"; depends=[countrycode dplyr httr]; }; + rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; - rzmq = derive2 { name="rzmq"; version="0.7.7"; sha256="0gf8gpwidfn4756jqbpdbqsl8l4ahi3jgavrrvbbdi841rxggfmx"; depends=[]; }; - s20x = derive2 { name="s20x"; version="3.1-16"; sha256="10z19q28wv3jnrs8lhban4a6hxqxgivcalq633p3hpa4zhw7nsj7"; depends=[]; }; - s2dverification = derive2 { name="s2dverification"; version="2.5.0"; sha256="1d8ydjgrrqxg29f5sdngch1l1zlg7bsrv04702v46x8x98521mc4"; depends=[abind bigmemory GEOmap geomapdata mapproj maps ncdf4 plyr SpecsVerification]; }; + rzmq = derive2 { name="rzmq"; version="0.9.0"; sha256="01fw6xpjq3h1ss38swivnp3rv7sh2lrdp0qcxz1ff7yln9sm5qsm"; depends=[]; }; + s2 = derive2 { name="s2"; version="0.1-1"; sha256="1k6329ra119ygb0z496894s4yra7f4dsg1ghpdk8k3ashd9yh6gd"; depends=[Rcpp]; }; + s20x = derive2 { name="s20x"; version="3.1-19"; sha256="1v16j3c38iak1wf887s02233g27fvwb06dyvdbg15g4dqh09sn7s"; depends=[]; }; + s2dverification = derive2 { name="s2dverification"; version="2.8.0"; sha256="13cjzxrjwahjhdw5q8lpbwgywgswqrcnj7rkff9kraan9lj83bkk"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; }; + sAIC = derive2 { name="sAIC"; version="1.0"; sha256="1ih63cfs98kb61gwbmrx2yq7iacb5qa1qrh1a264041qd27r5pj5"; depends=[]; }; sBF = derive2 { name="sBF"; version="1.1.1"; sha256="0dankakl4rwl9apl46hk57ps4mvn2l1crw4gdqds26fc8w6f6rab"; depends=[]; }; + sBIC = derive2 { name="sBIC"; version="0.2.0"; sha256="1fx17c9w7v6wi02i293vjdahwxx4b5a118r655cl12gsd5qwqj11"; depends=[combinat flexmix hash igraph mclust poLCA R_methodsS3 R_oo Rcpp]; }; + sEparaTe = derive2 { name="sEparaTe"; version="0.2.1"; sha256="0k1c0wa052f1fprc9jn0i3g2cawxfhkan998jlhkr4iy986jynw9"; depends=[]; }; sExtinct = derive2 { name="sExtinct"; version="1.1"; sha256="1l6232z6c4z3cfl1da94wa6hlv9hj5mcb85fj1y0yparkvvl8249"; depends=[lattice]; }; + sFFLHD = derive2 { name="sFFLHD"; version="0.1.1"; sha256="19zhx0rc6h44301a5q68r9jbxzh12ci3387d1c319vdiw05nschy"; depends=[conf_design DoE_base]; }; sGPCA = derive2 { name="sGPCA"; version="1.0"; sha256="16aa5jgvkabrlxaf1p7ngrls79mksarh6di3vp26kb3d3wx087dx"; depends=[fields Matrix]; }; + sNPLS = derive2 { name="sNPLS"; version="0.1.4"; sha256="04q6a7b27lmc9racc8g1f5wrz1qa322crsa7kdb4r8kdpkm9pji6"; depends=[car ks MASS Matrix pbapply plotrix rgl]; }; sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; }; - sSDR = derive2 { name="sSDR"; version="1.1.0"; sha256="0f8j1m4j6y8pppaw05naharfqlzb5y8d9db29fi86pm7w1x49511"; depends=[MASS Matrix]; }; + sSDR = derive2 { name="sSDR"; version="1.2.0"; sha256="1fqsglqzsbzdvcdnwwf7mg6x20zfpw66x63r6avac3w1pz3n7kvx"; depends=[MASS Matrix]; }; sValues = derive2 { name="sValues"; version="0.1.4"; sha256="0y2cv3wls2y3zpbm2d098xj5n098yjl32yi7mwha6mhfwfa4y99l"; depends=[caTools ggplot2 reshape2]; }; + saasCNV = derive2 { name="saasCNV"; version="0.3.4"; sha256="12h5vrl55sb4wmx0hzib5iax8p0q2qzk19h15r0asfkh9l7qz94l"; depends=[DNAcopy RANN]; }; sac = derive2 { name="sac"; version="1.0.1"; sha256="1rl5ayhg5y84fw9w3zf43dijjlw9x0g0w2z4haw5xmxfni72ms8w"; depends=[]; }; saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sadists = derive2 { name="sadists"; version="0.2.2"; sha256="1w42j0g3yi3mqamkl9z3v103vv2hy2l1cy5ijbam0yddsaqqig3b"; depends=[hypergeo orthopolynom PDQutils]; }; - sads = derive2 { name="sads"; version="0.2.4"; sha256="15kszjlqz3rzxfmsfd8zbl6hx40z9j5drzyvac1h244dhrms6lal"; depends=[bbmle GUILDS MASS poilog VGAM]; }; + sads = derive2 { name="sads"; version="0.3.1"; sha256="17ndy8li01qgd86l3wvmkwjs2iz982bmrkxikv6y69s8mznd82qp"; depends=[bbmle GUILDS MASS poilog VGAM]; }; sae = derive2 { name="sae"; version="1.1"; sha256="1izww27cqd94yrfbszbzy44plznxsirzn0752ag7xw7qzm5ywp3d"; depends=[MASS nlme]; }; sae2 = derive2 { name="sae2"; version="0.1-1"; sha256="0fbbh2s0gjhyhypaccnd37b5g2rhyzq7mrm6s0z36ldg1pzi4dd9"; depends=[MASS]; }; - saeSim = derive2 { name="saeSim"; version="0.7.0"; sha256="03zfw18fvx8blh9iijh3rnglg8zbsvd9dq3kqv6ajz3hwr90z29g"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; + saeRobust = derive2 { name="saeRobust"; version="0.1.0"; sha256="1zin9ix4wx3qbx2mfjyn61l0g1k4dgn4ps79qn21y6l9r647ya9q"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules Rcpp RcppArmadillo spdep]; }; + saeSim = derive2 { name="saeSim"; version="0.8.0"; sha256="1yabhhrmp0d9vzs7cn7ngdilmyli10zqyv5ys2sx9s5pqqlvgbij"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; saemix = derive2 { name="saemix"; version="1.2"; sha256="1whwn54iiapdfig6qpzji3z3skir6jrs34dq78zlynibgrg95hx6"; depends=[]; }; saery = derive2 { name="saery"; version="1.0"; sha256="09x1v627llqbpiwkh1wr0z7gsndfdrjzag2hprhq1adbzh05k47z"; depends=[]; }; safeBinaryRegression = derive2 { name="safeBinaryRegression"; version="0.1-3"; sha256="1g68r6pp5l41rbgyfqgcha1gpsisnl0ybdmdqr4ylr43f61dpgvd"; depends=[lpSolveAPI]; }; safi = derive2 { name="safi"; version="1.0"; sha256="1km58w57kdmyfj4a97zhnjcka4q4pxm8r2br01qq2niaihpbzp98"; depends=[]; }; sampSurf = derive2 { name="sampSurf"; version="0.7-3"; sha256="165y2z9bhf7cyrh177fk87apqpgzyn69gf53f9mmii931cyykihw"; depends=[boot raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.0-4"; sha256="0by6l20hsaqvkcxpvn7lr6p2g78lb1464dygp7x4h8sq1fc4j4av"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; - samplesize = derive2 { name="samplesize"; version="0.2-2"; sha256="1sfyzrws6zy3m5dqyp1hqs6y5znkxfpayznz59a54s03r8c7xizk"; depends=[]; }; - samplesize4surveys = derive2 { name="samplesize4surveys"; version="2.4.0.900"; sha256="199g2gsbv1w1acn7nnlv2wbrhq7lc1mx8vvs1w9a9a8dkxdmml0g"; depends=[TeachingSampling]; }; - sampling = derive2 { name="sampling"; version="2.7"; sha256="0xp0djpgns2lbgshrpxcmqa7c180ds3ymqa5asyxxl74yiric7xi"; depends=[lpSolve MASS]; }; + samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; }; + samplesize4surveys = derive2 { name="samplesize4surveys"; version="3.1.2.400"; sha256="16q8pird6ic7001i3gkwqb2rlak9l853bf2m1y9njmdprsjs82yl"; depends=[TeachingSampling timeDate]; }; + samplesizelogisticcasecontrol = derive2 { name="samplesizelogisticcasecontrol"; version="0.0.6"; sha256="1xznql86r6snkkmk9g05jhdam06pr0qmg40mdzasl291nc50v5aa"; depends=[mvtnorm]; }; + sampling = derive2 { name="sampling"; version="2.8"; sha256="06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"; depends=[lpSolve MASS]; }; + samplingDataCRT = derive2 { name="samplingDataCRT"; version="1.0"; sha256="0ah3fi2sn642c8nicikhjhl1hdsjzshrf1j02swq0jaqggcqjdvk"; depends=[mvtnorm]; }; samplingEstimates = derive2 { name="samplingEstimates"; version="0.1-3"; sha256="1srdchlpxksfdqhf5qdvl7nz0qsxkxww7hzqj0q71asbzlq3am3p"; depends=[samplingVarEst]; }; - samplingVarEst = derive2 { name="samplingVarEst"; version="1.0-1"; sha256="049a964g6720p14fndvr68s7lypc0pac2bfdkm6fp278j8l34x7i"; depends=[]; }; - samplingbook = derive2 { name="samplingbook"; version="1.2.0"; sha256="1vynz6hsnz5d0vg66f8k67h24rb809k9chb4waymk6vwnp8lksz9"; depends=[pps sampling survey]; }; + samplingVarEst = derive2 { name="samplingVarEst"; version="1.0-2"; sha256="182y1srz2cs6rn8kh6nns5v29q0ww2jmv0yfp8b110qq23wd5mnd"; depends=[]; }; + samplingbook = derive2 { name="samplingbook"; version="1.2.1"; sha256="0xjsmsqj3ik2ffih8f2cpq6m5rpk603y697mh5m42frg20cqa87w"; depends=[pps sampling survey]; }; samr = derive2 { name="samr"; version="2.0"; sha256="0rsfca07pvmhfn7b49yk2ycw00wsq6dmrpv9haxz8q0xv7n5n2q9"; depends=[impute matrixStats]; }; sand = derive2 { name="sand"; version="1.0.2"; sha256="1y371ds86gcq2id996vp56h5dax2wm0mlk1ks2mp1k81n63l7wmf"; depends=[igraph igraphdata]; }; sandwich = derive2 { name="sandwich"; version="2.3-4"; sha256="0kbdfkqc8h3jpnlkil0c89z1192q207lii92yirc61css7izfli0"; depends=[zoo]; }; sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; }; sankey = derive2 { name="sankey"; version="1.0.0"; sha256="0wm10f514sg3gfrz291k720kznnyssznyvr49c15i26bhb82m0q0"; depends=[simplegraph]; }; sanon = derive2 { name="sanon"; version="1.5"; sha256="1iikm7ivlz87kbq0ax9r1dz29zdq1kmhxd2imzc4hkvr1rwgciv6"; depends=[]; }; - sapa = derive2 { name="sapa"; version="2.0-1"; sha256="11xgd2ijfz5yn0zyl5gfy97h2cxi1vyxkrijy2s9b78wm7fzpnkv"; depends=[ifultools splus2R]; }; + sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; }; + sarima = derive2 { name="sarima"; version="0.4-3"; sha256="1y4wz4c27lmxkwc87diy5fvj25jzmflfji5b4ajx6pql3d3ral4s"; depends=[FitAR FitARMA ltsa PolynomF portes]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; satellite = derive2 { name="satellite"; version="0.2.0"; sha256="00znkb9wsg7yqxykb5bhl1chqir26h4ixhcqzxg6j1c4hpd2sakk"; depends=[plyr raster Rcpp]; }; saturnin = derive2 { name="saturnin"; version="1.1.1"; sha256="0cjp4h1s9ivn17v8ar48mxflaj9vgv92c8p9l2k5bc9yqx9mcs36"; depends=[Rcpp RcppEigen]; }; saves = derive2 { name="saves"; version="0.5"; sha256="1b4mfi2851bwcp0frx079h5yl6y1bhc2s8ziigmr8kwy1y1cxw10"; depends=[]; }; saws = derive2 { name="saws"; version="0.9-6.1"; sha256="0w40j6xczqs74z1z3na4510w06px7yn55s2mw9mddd6736l56fv1"; depends=[gee]; }; + sbfc = derive2 { name="sbfc"; version="1.0.1"; sha256="1xz8h1m5d5ahrz4wsy55amd5mxh3acjs5qmcn7gl6yh3pn0c8phf"; depends=[DiagrammeR discretization Matrix Rcpp RcppArmadillo]; }; sbgcop = derive2 { name="sbgcop"; version="0.975"; sha256="0f47mvwbsym4khwgl0ic3pqkw3jwdah9a48qi3q93d46p2xich61"; depends=[]; }; sbioPN = derive2 { name="sbioPN"; version="1.1.0"; sha256="0yvg55xnkhm35hfl7rldy2grb26hm4a68jr4x9n45fs7hhdylxri"; depends=[]; }; sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; + sbrl = derive2 { name="sbrl"; version="1.2"; sha256="1d0f2mlzzcghhvqagrr954qa69b5v47milw3iazxihh8q1qlird2"; depends=[arules Rcpp]; }; + sbtools = derive2 { name="sbtools"; version="1.1.6"; sha256="1wvd7xbkfyx88bi1vz30c6jb20fgsrcgpvkw4g4ym0966vhv1ca1"; depends=[curl httr jsonlite stringr]; }; sca = derive2 { name="sca"; version="0.9-0"; sha256="1xqdcxxsrsl8v2i8ifqcgb38vayz8ymay2sw4m9hmpma54a6r9j5"; depends=[]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4"; sha256="0fhc7d2nfhm8w6s6z1ls6i8d7c90h4q7rb92rz8pgq3xh031hpcf"; depends=[rJava]; }; - scales = derive2 { name="scales"; version="0.4.0"; sha256="19y6q4j8vpmc73dnn4ncp5wj44gri7m77ys3z2rn3crrcc9zc7l5"; depends=[dichromat labeling munsell plyr RColorBrewer Rcpp]; }; + scales = derive2 { name="scales"; version="0.4.1"; sha256="1lqccfmqdwrw0cjyqvw2zvgpk2jvnqrfb303l1raqyyf3zxqhav4"; depends=[dichromat labeling munsell plyr RColorBrewer Rcpp]; }; scalreg = derive2 { name="scalreg"; version="1.0"; sha256="06iqij1cyiw55ijzk2byrwh3m5iwsra7clx8l4v69rc236q8zbdi"; depends=[lars MASS]; }; - scam = derive2 { name="scam"; version="1.1-9"; sha256="1hx8y324bgwvv888d34wq0nnmqalfh5f26b5n36saaizm4a12wyf"; depends=[Matrix mgcv]; }; + scam = derive2 { name="scam"; version="1.2-1"; sha256="039iym85khym5m6g712lbd5s0c6dfw9xlpvlj29rwlcl1dkr1g7v"; depends=[Matrix mgcv]; }; + scan = derive2 { name="scan"; version="0.20"; sha256="1xyng9dlfmp7n2h91n4xy9lx3jm205gjiizdqk1yj1qw8mmahvqc"; depends=[nlme]; }; + scanstatistics = derive2 { name="scanstatistics"; version="0.1.0"; sha256="0snscxaw2j406bi29ns0z34lb3q39fq3wikkdnps6gkvxg97614i"; depends=[data_table gamlss_dist magrittr plyr sets]; }; scape = derive2 { name="scape"; version="2.2-0"; sha256="0dgbh65fg6i5x4lpfkshn382zcc4jk1wp62pwd2l2f59pyfb92a3"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; - scatterD3 = derive2 { name="scatterD3"; version="0.6.1"; sha256="1d42fd2rzk5vgz7d971zv5f2yxm5zsy4awax9qzm9hdm5mf241c5"; depends=[digest ellipse htmlwidgets]; }; - scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-36"; sha256="0bdxfdw23921h3rbpq0y4aixplzpkk95wgm2932kh0x7a4bnhswh"; depends=[]; }; + scatterD3 = derive2 { name="scatterD3"; version="0.8.1"; sha256="1fyk2z8ari73nbah2r4c677nm3v0whfia6sh39gr674cczp6vc8q"; depends=[digest ellipse htmlwidgets]; }; + scatterpie = derive2 { name="scatterpie"; version="0.0.6"; sha256="11ks8rarcgk8hj9vnhlj01v6z2kid0lv2nkkbqgj8gbcni9wgawr"; depends=[ggforce ggplot2 tidyr]; }; + scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-38"; sha256="1mw1v725cdq24lfygjjmx3vmxzr2zpd332v0lham7g0p4r7lc8pb"; depends=[]; }; + scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; }; scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; }; - schoRsch = derive2 { name="schoRsch"; version="1.2"; sha256="1dz4mws227a5h3kkmpnz06liy9n3k01ihvcxxwnj8283w3b23bci"; depends=[]; }; + schoRsch = derive2 { name="schoRsch"; version="1.4"; sha256="19k34i74ira71v0r5gz9rfnbadnjzi0wpxcm4zqqn7y6jpmfbd11"; depends=[]; }; scholar = derive2 { name="scholar"; version="0.1.4"; sha256="088clkpllpjv9rjb45v46dga4ig11ifvfyclgfgcgqvxy5cn92jr"; depends=[dplyr httr R_cache rvest stringr xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; schumaker = derive2 { name="schumaker"; version="0.3"; sha256="0y2jyy3za7xi8l9kc0z35mqc7a29lbxmaqgax8frljmqsnwkwwhp"; depends=[]; }; schwartz97 = derive2 { name="schwartz97"; version="0.0.6"; sha256="0l34f30l75zrg3n377jp0cw7m88cqkgzy6ql78mrx8ra88aspfzn"; depends=[FKF mvtnorm RUnit]; }; scidb = derive2 { name="scidb"; version="1.2-0"; sha256="17y1bml8kb896l3hsw356qdj25sfbdvm10dyxhaafdgcbp5ywcrn"; depends=[digest iterators Matrix RCurl zoo]; }; + scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; scio = derive2 { name="scio"; version="0.6.1"; sha256="0h15sscv7k3j7qyr70h00n58i5f44k96qg263mxcdjk9mwqr0y65"; depends=[]; }; sciplot = derive2 { name="sciplot"; version="1.1-0"; sha256="0na4qkslg3lns439q1124y4fl68dgqjck60a7yvgxc76p355spl4"; depends=[]; }; sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; - scmamp = derive2 { name="scmamp"; version="0.2.5"; sha256="1i0fkmpkdjbjwvh1y4synplafvcx9bjyf8i856sm5i3kjyh6vx46"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; + scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; + scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; }; scoring = derive2 { name="scoring"; version="0.5-1"; sha256="0vxjcbp43h2ipc428qc0gx7nh6my7202hixwhnmspl4f3kai3wkp"; depends=[]; }; + scoringRules = derive2 { name="scoringRules"; version="0.9.2"; sha256="04vkw2azyj1xsnyr58cgagajcd2f7r0843i9v77p4wvzv96rl851"; depends=[MASS Rcpp RcppArmadillo]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; + scphaser = derive2 { name="scphaser"; version="1.0.0"; sha256="1n5ihdpjclpiwg2i6v8m46ysjg53fzsr0j60ijnvrq328y0iqis4"; depends=[BiocParallel cluster Hmisc R_utils]; }; scrapeR = derive2 { name="scrapeR"; version="0.1.6"; sha256="1rqgqpn9rc43rh356z9gb51pjhdczr9a9mgv0i078nniq156rmlb"; depends=[RCurl XML]; }; scrime = derive2 { name="scrime"; version="1.3.3"; sha256="1vp7ai10m0f3s0hywyqh0yllxj6z6p795zqpr6vp58fh6yq20x73"; depends=[]; }; - scriptests = derive2 { name="scriptests"; version="1.0-15"; sha256="1f55rnz4zbywyn79l2ac2600k95fwxgnyh1wzxvyxjh4qcg50plv"; depends=[]; }; - scrm = derive2 { name="scrm"; version="1.6.0-2"; sha256="1a3m56j4ca526mjhc7h0967k5bja336dw1bpna119l5yic6hkc1n"; depends=[Rcpp]; }; + scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; + scrm = derive2 { name="scrm"; version="1.7.2-0"; sha256="1i4mdymds8xmxcxzc7a9lcmy2q11gmdgnfbm2hircf07j5pbb2d8"; depends=[Rcpp]; }; scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; }; - scrypt = derive2 { name="scrypt"; version="0.1.0"; sha256="1hc1rziigwggdx2pvklldkw88mdzbwa8b8a2a0ip4cm1w6flsl9n"; depends=[Rcpp]; }; + scrypt = derive2 { name="scrypt"; version="0.1.1"; sha256="0lgnmag2yr5r67kqni2mpbvflqzaq8icilcxqja7c8fzw6xxzjrx"; depends=[Rcpp]; }; scs = derive2 { name="scs"; version="1.1-1"; sha256="1qx8b73g5v7mjx85lx5bln6j6i9r7m238i7hm8adr2jrbl33532y"; depends=[Matrix]; }; scuba = derive2 { name="scuba"; version="1.8-0"; sha256="1hlgvbcx7xmpaaszyqvhdwvwmf8z209jkf6aap205l3xkkc692c4"; depends=[]; }; + scvxclustr = derive2 { name="scvxclustr"; version="0.1"; sha256="0d72hr9jcw513mapx1plif07b4qsi9b9pad6dwrqlh3z8kb8mn4j"; depends=[cvxclustr gglasso igraph Matrix mclust Rcpp RcppEigen]; }; sdPrior = derive2 { name="sdPrior"; version="0.3"; sha256="0d3w75p3r2h07xhp7fj4si1y4sav8vs0lq6h2h4fn4f2inn3l0vl"; depends=[caTools GB2 MASS]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; - sdcMicro = derive2 { name="sdcMicro"; version="4.6.0"; sha256="0j6adz04smp8pbg62w7hyqp2wl1cqazmxf4vnvb4jxcqw69qxd74"; depends=[car cluster data_table e1071 ggplot2 knitr MASS Rcpp rmarkdown robustbase sets xtable]; }; - sdcMicroGUI = derive2 { name="sdcMicroGUI"; version="1.2.0"; sha256="0bhrpric17y1ljm18a00i6bkxfq1cpljfkib8qbb4jyj5s50f3ps"; depends=[cairoDevice foreign gWidgets gWidgetsRGtk2 Hmisc sdcMicro vcd]; }; - sdcTable = derive2 { name="sdcTable"; version="0.20.3"; sha256="03ljsk1y1l0771ika013qgdm3zd3q60lxc2a11dnaglnz4pmvyx1"; depends=[data_table lpSolveAPI Rcpp Rglpk stringr]; }; + sdat = derive2 { name="sdat"; version="1.0"; sha256="1rp2s3y44f3vj0p16j1k2rrs44kmnzy9k0lpcm9ga801nbv93saz"; depends=[]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.0.0"; sha256="1ppqs47p4zha30axgwyvf0dhfrh2hjhi6cgwchikl9k9zwdh4byv"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS xtable]; }; + sdcTable = derive2 { name="sdcTable"; version="0.21.6"; sha256="17vi1mzr1kiq47dv1zskg63cpsqwxraj01g6sp6lx9vmw2cax74r"; depends=[data_table lpSolveAPI Rcpp Rglpk slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; - sde = derive2 { name="sde"; version="2.0.14"; sha256="1j4lvbc4f78dkz7fkwb07498a0xnnz0xrszgmhz80s2fvc1c5djs"; depends=[fda MASS zoo]; }; + sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.6"; sha256="1y1l5fl7lh636kyvc2hwssdnifl055nrz3riplj4qqw88lkm1mk8"; depends=[]; }; + sdm = derive2 { name="sdm"; version="1.0-32"; sha256="1h20ap4q7bq2y92mrggir8fq4dlw6hz0pvpaqnj2v8fxng50fpjx"; depends=[raster sp]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; - sdnet = derive2 { name="sdnet"; version="2.03.3"; sha256="1884pil3brm7llczacxda6gki501ddyc5m8ggqjix64kbvw37slv"; depends=[]; }; - sdprisk = derive2 { name="sdprisk"; version="1.1-3"; sha256="1rwzi112fjckzxmhagpg60qm9a35fqx8g8xaypxsmnml6q00ysiq"; depends=[numDeriv PolynomF rootSolve]; }; + sdnet = derive2 { name="sdnet"; version="2.3.8"; sha256="10c962wbzgl2zpz7yx5kpryldbbq76qrd5pnz4rlmbaa9kfg08s5"; depends=[]; }; + sdprisk = derive2 { name="sdprisk"; version="1.1-5"; sha256="1c6mipq8sh8347i7m7dh47f69fr21xkrsk8yjgsdvcy41h8zijmf"; depends=[numDeriv PolynomF rootSolve]; }; sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; }; sdwd = derive2 { name="sdwd"; version="1.0.2"; sha256="0l0w4jn2p9b7acp8gmlv4w8n662l397kbrm4glslik0vnmjv151w"; depends=[Matrix]; }; - seacarb = derive2 { name="seacarb"; version="3.0.11"; sha256="07kw9b8v73sz6nxpr0lb9f0ckkb6pgyw05nwpg43fkwc0qvykbvw"; depends=[oce]; }; + seacarb = derive2 { name="seacarb"; version="3.1.1"; sha256="1q7r9b6f38lnabfifyjvhc0aiphdp9z2lbh02da1vgpz538bv5zj"; depends=[oce]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; - searchConsoleR = derive2 { name="searchConsoleR"; version="0.1.2"; sha256="02a28ism9kgfdmn00pdv9p6xg24c5kr5n0shghg5fq9yhxap59iv"; depends=[googleAuthR stringr]; }; + searchConsoleR = derive2 { name="searchConsoleR"; version="0.2.1"; sha256="1hf87x3jfwl12d1gspnrgpzh90hpci5gh54hasi6bx6z8xw44ssb"; depends=[googleAuthR stringr]; }; searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; }; seas = derive2 { name="seas"; version="0.4-3"; sha256="1n0acg6fvaym4nx1ihw0vmb79csds0k4x9427qmcyxbl9hxxmllp"; depends=[]; }; season = derive2 { name="season"; version="0.3-5"; sha256="08f382kq51r5g9p5hsnjf17dwivhx1vfgmmwp1vzmbqx1drlqkzx"; depends=[coda ggplot2 MASS mgcv survival]; }; - seasonal = derive2 { name="seasonal"; version="1.2.1"; sha256="0y85z9rgqyzfry8ak5bi565jhkfks1xd2zhjyh63p823cyjln6cf"; depends=[x13binary]; }; + seasonal = derive2 { name="seasonal"; version="1.5.1"; sha256="0gwjzp7syg20qbv7jp97ibd51905fkxdsfvpjmvk4zgxd5p69cfm"; depends=[x13binary]; }; + seasonalview = derive2 { name="seasonalview"; version="0.2"; sha256="1gmg9641niazf3vs4ranqyi9i4bv23msxp11r6dyhcm9apxqlyxs"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; }; - secr = derive2 { name="secr"; version="2.10.2"; sha256="14l284qhnic7ng6zpnnfxqk4gxlmx9xlfb675k5691x2bdy4z8gx"; depends=[abind MASS mgcv nlme raster sp]; }; - secrdesign = derive2 { name="secrdesign"; version="2.3.0"; sha256="1f5swggkky721z0js2jr1gb3mrx9h6qlld70bjd86x9f73s9cm0n"; depends=[abind secr]; }; + secr = derive2 { name="secr"; version="2.10.4"; sha256="034ad8w9p478552ax7gr5yp3fh6r968b92rmisjnags8x1vsynda"; depends=[abind MASS mgcv nlme raster sp]; }; + secrdesign = derive2 { name="secrdesign"; version="2.4.0"; sha256="0v9d94ra614884imv29qwhr4zkx3dzssdpz8nv86k1kigx51w1xp"; depends=[abind secr]; }; secrlinear = derive2 { name="secrlinear"; version="1.0.5"; sha256="084d0spshf3lh1m50kyb0r8x9lz4yrfj6b7snywffxhqyjw147hf"; depends=[igraph maptools MASS secr sp]; }; - seeclickfixr = derive2 { name="seeclickfixr"; version="1.0.0"; sha256="15dgq7bc71y5jykvpzpwbjxcw3jjh9vf12pwyaizhkb5fkyrjjmf"; depends=[jsonlite RCurl]; }; + seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; seedy = derive2 { name="seedy"; version="1.3"; sha256="1a21sl8i7z12cjaqj08lkq3viazxlgxv82vaarm58fgbpsvdi0m0"; depends=[]; }; seeg = derive2 { name="seeg"; version="1.0"; sha256="1d45vl075p4qbd74gpaa8aw1h82p9n633fym10yp9bmcv4gwksg6"; depends=[car sgeostat spatstat]; }; seem = derive2 { name="seem"; version="1.0"; sha256="0cjdi9c89bqvrx9gzxph958cfqicc1qfnzsair0gvsk3cxsrw6bf"; depends=[]; }; - seewave = derive2 { name="seewave"; version="2.0.2"; sha256="1dr2kldx85fbzawy5lp5z3044hsh72vdyirl15b12w8nrh2p1a5z"; depends=[tuneR]; }; + seewave = derive2 { name="seewave"; version="2.0.5"; sha256="1ml0jcqb6i6v0xgarvzg51rgax6lsf6y2255jq1kfz4v8n39vnh0"; depends=[tuneR]; }; seg = derive2 { name="seg"; version="0.5-1"; sha256="0gsdbq7b5wpknhlilrw771japr63snvx4vpirvzph4fjyby1c7rg"; depends=[sp splancs]; }; - segmag = derive2 { name="segmag"; version="1.2.2"; sha256="130saznhssg0qsc34fcw80x92mmqhjgizrb4fxpjsg7a8jjrclp8"; depends=[Rcpp]; }; + segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; }; segmented = derive2 { name="segmented"; version="0.5-1.4"; sha256="1740cvx2q4v23g4q0zkvg50s5bv8jcrlzzhm7fac4xn0riwmzp5i"; depends=[]; }; seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; }; - seismicRoll = derive2 { name="seismicRoll"; version="1.0.1"; sha256="1lls2gbx994j7y3kwpf00ngga5qlzqxwc3cy9x21gy9iq2s8hn0x"; depends=[Rcpp]; }; + seismicRoll = derive2 { name="seismicRoll"; version="1.1.2"; sha256="183lx9lgmi06lv1l4gbmlmblfgjzhph4aavdnxrykpp6122hsq61"; depends=[Rcpp]; }; sejmRP = derive2 { name="sejmRP"; version="1.3"; sha256="0qrlzanmqqqwsb83rh2wys4jl2mz1ijwznnx32i2gk4h1nvkwxbx"; depends=[DBI dplyr RPostgreSQL rvest stringi XML xml2]; }; selectMeta = derive2 { name="selectMeta"; version="1.0.8"; sha256="0i0wzx5ggd60y26lnn4qk4n8h27ahll9732026ppks1djx14cdy0"; depends=[DEoptim]; }; selection = derive2 { name="selection"; version="1.0"; sha256="1w2mzb16frcbh55icc5g8ai3hri9j6dhp7h0kc96iaspphnfw4n8"; depends=[fifer norm]; }; - selectiongain = derive2 { name="selectiongain"; version="2.0.50.1"; sha256="025y0g5jj416k1a71jxwyr69cza6xvfq3gv3lv3m7i3sbd4bsmaj"; depends=[mvtnorm]; }; - selectiveInference = derive2 { name="selectiveInference"; version="1.1.3"; sha256="0f173mzijw34f9m7xqljv1pczk8pvqlwmi30p6i0zld6amg6h76s"; depends=[glmnet intervals]; }; - selectr = derive2 { name="selectr"; version="0.2-3"; sha256="1ppm1f6mwfwbq92iwacyjn46k1d8148j4zykmjvw8as6c8blgap1"; depends=[stringr XML]; }; + selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; + selectiveInference = derive2 { name="selectiveInference"; version="1.2.2"; sha256="1rmrvwa54xj3rxmfnhr2vwdxv9s3xlv35pqf08iiy525nqd2hsy5"; depends=[glmnet intervals survival]; }; + selectr = derive2 { name="selectr"; version="0.3-1"; sha256="0jc946456qp3g2icaifrqn4z7z5pn23rfw77796aa8mmlkp7qkyv"; depends=[stringr]; }; selectspm = derive2 { name="selectspm"; version="0.2"; sha256="0wvhlzhl0janhms107xczmilpmr4y26jgk0ag3g34iqba7fbnfqd"; depends=[ecespa spatstat]; }; + seleniumPipes = derive2 { name="seleniumPipes"; version="0.3.7"; sha256="1krpzh2gy3yl07c2n1d8q21xjc2qcv5ac1kv7212710bxkdyfad6"; depends=[httr jsonlite magrittr whisker xml2]; }; selfea = derive2 { name="selfea"; version="1.0.1"; sha256="0zyxbd5vg8nhigill3ndcvavzbb9sbh5bz6yrdsvzy8i5gzpspvx"; depends=[ggplot2 MASS plyr pwr]; }; selfingTree = derive2 { name="selfingTree"; version="0.2"; sha256="18ylxmg2ms4ccgm4ahzfl65x614wiq5id7zazjjz5y75h8gs7gzj"; depends=[foreach]; }; - sem = derive2 { name="sem"; version="3.1-6"; sha256="1gx0j3ignpmgy3qvnp0qjmhlzbxj0wjfr6jfs9d29cnq8b38p73c"; depends=[boot DiagrammeR MASS matrixcalc mi]; }; + sem = derive2 { name="sem"; version="3.1-8"; sha256="17qid9jvkmccgnw56jwxmkc6hmanc7vp1c6acj5nv9j47f4bc3jv"; depends=[boot MASS matrixcalc mi]; }; semGOF = derive2 { name="semGOF"; version="0.2-0"; sha256="1lsv72yaza80jqadmah7v2cpfqfay57y12hcz6brvia6bmr5qagb"; depends=[MASS matrixcalc sem]; }; semPLS = derive2 { name="semPLS"; version="1.0-10"; sha256="0q5linjyv5npkw4grx3vq58iq2q1grf06ikivhkg8w7rvb7pqn6b"; depends=[lattice]; }; semPlot = derive2 { name="semPlot"; version="1.0.1"; sha256="0sdp970qb4mz5vzncfmqxvg1z12gmiyqi3yaz9x2drm3rgzavy83"; depends=[colorspace corpcor igraph lavaan lisrelToR plyr qgraph rockchalk sem XML]; }; - semTools = derive2 { name="semTools"; version="0.4-11"; sha256="00b695ylgx9r5rxaq6zg05nk99kzr00sw379dxr6mar0kpazy4qn"; depends=[lavaan]; }; + semTools = derive2 { name="semTools"; version="0.4-14"; sha256="1j1chman14i908c009lf0jgdmrrb8avgp8nif1i9wlj6vgif890c"; depends=[lavaan]; }; semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; + semds = derive2 { name="semds"; version="0.9-2"; sha256="0ig8b7ii1c8av0il904b71lzr8lqdiibwf16yj5dp8n4xc80bryh"; depends=[minpack_lm pracma]; }; semiArtificial = derive2 { name="semiArtificial"; version="2.0.1"; sha256="1bjjqcm6r3hxj5752ywdzllh7wr4rwzqlrkf50wpdl05za3fbfd9"; depends=[cluster CORElearn dendextend fpc ks logspline MASS mclust nnet robustbase RSNNS timeDate]; }; semisupKernelPCA = derive2 { name="semisupKernelPCA"; version="0.1.5"; sha256="1v8wdq63b1gqicj8c9a24k0w7cc0bkg0mnc9z5mklsfcl7g0g6k9"; depends=[datautils irlba]; }; semsfa = derive2 { name="semsfa"; version="1.0"; sha256="1x227rigjk9glq5x9lp6xxcf3y9i73rv3mrj7lkr2ycnsx8zz57h"; depends=[doParallel foreach iterators mgcv moments np]; }; + semtree = derive2 { name="semtree"; version="0.9.9"; sha256="1a66xiy0p9q3bmppc8rhnd0lfip2vxjjqi9094zqvnclkznrc9ar"; depends=[bitops digest OpenMx rpart rpart_plot sets]; }; + semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; - sensR = derive2 { name="sensR"; version="1.4-6"; sha256="1nw8kkk70nrw8i95v52ncg4zrmkq84w94d5d1c474ap0pfg8rfpj"; depends=[MASS multcomp numDeriv]; }; - sensitivity = derive2 { name="sensitivity"; version="1.11.1"; sha256="1v4lzy687r66jmxgm0fy81wgj70ak58hd13h1jn60wb5j3p91qki"; depends=[boot]; }; + sensR = derive2 { name="sensR"; version="1.4-7"; sha256="06dzb1sid7wq9i0x6pnsb5srk9z9pv9y8y5br6bkcbm6k3iv5jsv"; depends=[MASS multcomp numDeriv]; }; + sensiPhy = derive2 { name="sensiPhy"; version="0.6.0"; sha256="00fw8fm3n4jlz5v9fvni4ff3x2fv0ixpjddk2mn6cac7yqfsha6p"; depends=[ape caper ggplot2 phylolm]; }; + sensitivity = derive2 { name="sensitivity"; version="1.14.0"; sha256="042bwjp906jmhsp09n03nf6xkzfvgad13f0bkm3nk5qf9xfjfszm"; depends=[boot]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; + sensitivityfull = derive2 { name="sensitivityfull"; version="1.0.0"; sha256="162gf45gby7kz93j6xbv2fhzcmjqk55897m58xf64csphgfv6ibv"; depends=[]; }; sensitivitymv = derive2 { name="sensitivitymv"; version="1.3"; sha256="1bxf85q91smnsl2lsig43vk0c63c805d8ry1xh3w6q675djj14ad"; depends=[]; }; sensitivitymw = derive2 { name="sensitivitymw"; version="1.1"; sha256="1bknnfkkqgmchabcjdfikm37sn5k41ar8lpnjw58i8qh7yzq237i"; depends=[]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; + sentimentr = derive2 { name="sentimentr"; version="0.4.0"; sha256="0sfr1bgv8lap91bw9q7z4d1cn64kmn2iqf8mkxxcp9jcskb0qp0z"; depends=[data_table ggplot2 stringi syuzhet]; }; separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; }; seqCBS = derive2 { name="seqCBS"; version="1.2"; sha256="1kywi3kvvl9y6nm7cwf6fj8gz9gzznp5va336g1akzgy77k82d8v"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.1"; sha256="1694swd8ik9fbiflmnw4xpq82kq18rqzkw0dv5pvq30c47xjgamv"; depends=[survival xtable]; }; - seqHMM = derive2 { name="seqHMM"; version="1.0.5"; sha256="0dy0iiijfnsq7i49hj2vc7j8n1d823laa63q6pkrjni9fb4xw9v8"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; - seqMeta = derive2 { name="seqMeta"; version="1.6.5"; sha256="0ws6xa1bcibg49vax4in9gc1pvf19ggf95nfy0qr3pp5fpbqw29d"; depends=[CompQuadForm coxme Matrix survival]; }; + seqHMM = derive2 { name="seqHMM"; version="1.0.6"; sha256="04cfii5i337g11qdrhq3sflas2vv8avy4qylxvridxqibvk70pjz"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; + seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; }; seqPERM = derive2 { name="seqPERM"; version="1.0"; sha256="1i8ai4gxybh08wxjh96m6xlqxhh7ch0xihjs879snmy4zqfi0pap"; depends=[]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; - seqinr = derive2 { name="seqinr"; version="3.1-3"; sha256="0bbjfwbqg74wsamb3iz01g0ssdpdpg65gh00y9xlnpk4wb990n4n"; depends=[ade4]; }; - seqminer = derive2 { name="seqminer"; version="5.0"; sha256="1v9z0ip5jcmpbw4a5lmf4nll7d3khblcrqcjk7k1zplwj6xnbqfx"; depends=[]; }; - seqmon = derive2 { name="seqmon"; version="0.2"; sha256="075hc6vgl1w3nisrihf5w6mkkg9q601jsqxm9hk9yagyvvd7d78w"; depends=[]; }; + seqinr = derive2 { name="seqinr"; version="3.3-3"; sha256="1n1a2zqv1s5415fz2vgqys3nm282d6lkglbd1vprx4k76lp55gfn"; depends=[ade4 segmented]; }; + seqminer = derive2 { name="seqminer"; version="5.7"; sha256="0p75wyl70cvp36mwg5y74nv573j1gdqi15ac2a7xf61jmsq7ycpy"; depends=[]; }; + seqmon = derive2 { name="seqmon"; version="2.1"; sha256="0p7vbrx0l59wyxhg59a8nnnk1z46inys30rpchj0v5ggadaazjkx"; depends=[]; }; + seqtest = derive2 { name="seqtest"; version="0.1-0"; sha256="1bdfww9szh7h278id5xpfc39mxkcix3yvsdwc68wx3q3x0wxhqhq"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="2.1.2"; sha256="0f3aj96qvbr1wqimlv6rxg0v34zlrgc6pbdy7sfkwfzs1n44q1xf"; depends=[copynumber squash]; }; - serial = derive2 { name="serial"; version="1.1"; sha256="06qmvkmgp04izq8dr6ky44dfr3z3cv1c9dxkalv57qxccshkc1xq"; depends=[]; }; - seriation = derive2 { name="seriation"; version="1.2-0"; sha256="0krbrv9f0lw5vjcfjnak541c4hmyvqwkvqdlrgiapmwhl6lp6z9s"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; + sequoia = derive2 { name="sequoia"; version="0.7.2"; sha256="0qvy9bmaai85gnhhrw1r59vzxll1r8r0h51cn88d6n7801yi9r3r"; depends=[plyr]; }; + serial = derive2 { name="serial"; version="1.2"; sha256="1zjzm5ym8z9g97sff6bg9p5dhjpj6g26wam9j9gklffiry8dd9li"; depends=[]; }; + seriation = derive2 { name="seriation"; version="1.2-1"; sha256="1h3zl3imrymz4kdzccnplc6w6b793csgq5r9cfjc37gbmjg3jf1j"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; seroincidence = derive2 { name="seroincidence"; version="1.0.5"; sha256="07lphrp7r3i87633q8g6svk2mxbsvq4blrf8gnm0p99hkmz8wgg9"; depends=[]; }; - servr = derive2 { name="servr"; version="0.3"; sha256="1p85ii0w3fydsjqg8mrrg972qmrdrw1a1kbgpikq4w40vxp33szl"; depends=[httpuv jsonlite mime]; }; - sesem = derive2 { name="sesem"; version="1.0.1"; sha256="0s4xkv6bc5nxhj09mk9agnj11b9h7swccs9jrn4lg3fy12vqhf5a"; depends=[gplots lavaan mgcv]; }; + servr = derive2 { name="servr"; version="0.5"; sha256="1ixcl9xjc1k9zvl6v6bsw4kpramr1h53b4s46qg8kahkqy6kqd8a"; depends=[httpuv jsonlite mime]; }; + sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; sets = derive2 { name="sets"; version="1.0-16"; sha256="0pl0wnlgzyc2d87nkx90ficcww6lixmghhymhwi130vjjd0bqdjx"; depends=[]; }; + setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; - setwidth = derive2 { name="setwidth"; version="1.0-4"; sha256="0i565phbfj0rff13nyz6sy8cn4cch4fcjfgkns3z6c94w11b4703"; depends=[]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; + sf = derive2 { name="sf"; version="0.3-4"; sha256="0d5n8aw0d2ak96q4vlwmvk1g5m0acaqyr83l203wd470w4ksihqg"; depends=[DBI Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; + sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; + sfinx = derive2 { name="sfinx"; version="1.7.9"; sha256="0gnli24mi9zh5j9ycpraksf4z7crr27sv6j3ycww7jfq5lfhg8kp"; depends=[]; }; sfsmisc = derive2 { name="sfsmisc"; version="1.1-0"; sha256="0580piv4n1nispl3pa8nfjjfnb8iwaqky2dzdy0aqnxrxgrhqhvz"; depends=[]; }; sft = derive2 { name="sft"; version="2.0-7"; sha256="1fq1b32f08i4k9bv4hh7rhk1jj7kgans6dwh1bmawaqkchyab3jr"; depends=[fda]; }; sgPLS = derive2 { name="sgPLS"; version="1.4"; sha256="0yx3vg9rfm6jvrgfaky2dlbrbksa5475gx3g11x6i35nd2nb2p5z"; depends=[mixOmics]; }; sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; }; sgd = derive2 { name="sgd"; version="1.1"; sha256="1kqpaxyacaq1fkmy4hsj62167gcmqng4pmafpdjdpqxwdqxz9xxf"; depends=[BH bigmemory ggplot2 MASS Rcpp RcppArmadillo]; }; + sgee = derive2 { name="sgee"; version="0.2-0"; sha256="1dpbkab3wzcqp9rgy9gxibjs2dcpb5ql1dlgg97rxjr1fkigwxgk"; depends=[copula mvtnorm]; }; sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; - sglOptim = derive2 { name="sglOptim"; version="1.2.0"; sha256="06a70q7i93pyyadqngg1qd0kz52m73fpqlji6jxsiyixajcqn2q5"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress]; }; + sglOptim = derive2 { name="sglOptim"; version="1.3.5"; sha256="1ys4hlpfsyc0iwhr1gpwzf47snpmmyxv0clb2vbcfm0lr272h25l"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.2"; sha256="1yk9wvg98a2l9kdaksy75av9z9iz27v5d2zpsqhabqwkwfh6wkad"; depends=[igraph Matrix]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; - sgof = derive2 { name="sgof"; version="2.2"; sha256="087f4nbx9ppzi5za3f4w4msq2gd3r08v16fihppa30nqydg3ssbj"; depends=[poibin]; }; + sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; - shades = derive2 { name="shades"; version="0.1.0"; sha256="164m4xm63swp1b1kr86i4nnja79kfhzd3pyc1qwyby838brkm5aj"; depends=[colorspace]; }; + shades = derive2 { name="shades"; version="0.2.0"; sha256="1r2xbz1h144pg53g3ayy7n08091gv5zj52p02gv7kihir2kzxj0w"; depends=[]; }; + shadow = derive2 { name="shadow"; version="0.2.0"; sha256="1p2g0anxl6ynvq97jy7qwy9p9pjmfpii7irh6arhvybz28v4ky00"; depends=[raster rgeos sp]; }; shape = derive2 { name="shape"; version="1.4.2"; sha256="0yk3cmsa57svcvbnm21pyr0s0qbhnllka8nmsg4yb41frjlqph66"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; - shapes = derive2 { name="shapes"; version="1.1-11"; sha256="1zxckrl4pc6ppdbhp5h5ib4yp7iw7z3kciqibrijvbvjpkl1fl35"; depends=[MASS rgl scatterplot3d]; }; - sharpshootR = derive2 { name="sharpshootR"; version="0.9.1"; sha256="01qczwyh6gpw26qg77r5f9nrmfjd1glcbdxwvx0bdfa5j6m31iq4"; depends=[ape aqp circular cluster digest Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp vegan]; }; + shapes = derive2 { name="shapes"; version="1.2.0"; sha256="0fnwcxnrhy5iqzzmrkbbpr4rirg4ixl96656ywcc1mhwv6d6iw0z"; depends=[MASS rgl scatterplot3d]; }; + sharpeRratio = derive2 { name="sharpeRratio"; version="1.1"; sha256="0rgsad8idhjyjgwlzk358jlqkqf6sk7g6vl3fchkamjzxnhbb8p9"; depends=[ghyp Rcpp]; }; + sharpshootR = derive2 { name="sharpshootR"; version="1.0"; sha256="1x9cava7b9lg8qpmjqlbkqmpc9a2dn8k4kl71s4himr4wzp9z4y3"; depends=[ape aqp circular cluster digest Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; - shazam = derive2 { name="shazam"; version="0.1.2"; sha256="16n7l02sm9jyvag43y048ga7p3zpsfhmh7ar4759r68zc14sgj9k"; depends=[alakazam data_table doParallel dplyr foreach ggplot2 iterators lazyeval scales SDMTools seqinr stringi tidyr]; }; - shiny = derive2 { name="shiny"; version="0.13.1"; sha256="0lz57iv0xv8j2iczwznkypb5syjh5rk6lnyp92icphz4qmbcpkaa"; depends=[digest htmltools httpuv jsonlite mime R6 xtable]; }; + shazam = derive2 { name="shazam"; version="0.1.4"; sha256="0gb6nahnkhhymq0bkxgb165rr1saqri43khgqx2xgm37s0wxqfc9"; depends=[alakazam ape data_table doParallel dplyr foreach ggplot2 igraph iterators lazyeval scales SDMTools seqinr stringi tidyr]; }; + shiny = derive2 { name="shiny"; version="1.0.0"; sha256="152v2z1cyg6893b0qd5rs12a2m9dbzk7ak04qvbcym0s9y4l0kf4"; depends=[digest htmltools httpuv jsonlite mime R6 sourcetools xtable]; }; shinyAce = derive2 { name="shinyAce"; version="0.2.1"; sha256="0ycka8rsw0178q9klfid97vdn5cbyx3r778nis5s3dqipdyazdm9"; depends=[shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; - shinyFiles = derive2 { name="shinyFiles"; version="0.6.0"; sha256="08cvpvrsr1bh0yh17ap20bmwxa4bsan3h6bicrxzanl2dlwp8kvr"; depends=[htmltools RJSONIO shiny]; }; + shinyDND = derive2 { name="shinyDND"; version="0.1.0"; sha256="0nkvz4hmjzmxlzj4vkjrdy8xlbxapg1amk180irgvwicqldi4jpm"; depends=[htmltools shiny]; }; + shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.2"; sha256="0zqfay21nn2mrjk33g60rqb5mdac15rl53kkny7ypblmiky0mlzz"; depends=[digest shiny]; }; + shinyFiles = derive2 { name="shinyFiles"; version="0.6.2"; sha256="1lphzqbzg482lv0xiamfv28n5nyjppss9zzcpx1cd5fsz0xg1282"; depends=[htmltools RJSONIO shiny]; }; + shinyLP = derive2 { name="shinyLP"; version="1.1.0"; sha256="08vc35988pv0kx0kvdl26nkdzcgmi6w4xffmyylan7x59519imkk"; depends=[shiny shinyBS shinythemes]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; + shinyTime = derive2 { name="shinyTime"; version="0.2.1"; sha256="0gpa6kypchvvlq71nnlilciclcrhaa488prjz46sddrsxjy09mp7"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.2"; sha256="08n2s6pppbxn23ijp6vms609p4qwlmfh9g0k5hdfqsqxjrz1nndi"; depends=[shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; - shinydashboard = derive2 { name="shinydashboard"; version="0.5.1"; sha256="1p417ngxw9bk90kgz6n8f23w360knjdg6kkvrbarf7s91wfc8wcb"; depends=[htmltools shiny]; }; - shinyjs = derive2 { name="shinyjs"; version="0.5.0"; sha256="1p3l58cggf0cpdp7brsqz5ailk8w50d0v8z3zy5rm7351mzj3l07"; depends=[digest htmltools miniUI shiny]; }; - shinystan = derive2 { name="shinystan"; version="2.1.0"; sha256="1z97sjc4414rvxyghl30501bc60dshn8msj8k9wxaz5mby7yafbh"; depends=[DT dygraphs ggplot2 gridExtra gtools markdown reshape2 shiny shinyjs shinythemes threejs xtable xts]; }; - shinythemes = derive2 { name="shinythemes"; version="1.0.1"; sha256="0wv579cxjlnd7wkfqzy2x3qk7d1abql1nhw10rx1c4c808vsylkw"; depends=[shiny]; }; + shinydashboard = derive2 { name="shinydashboard"; version="0.5.3"; sha256="0anw22qxbis69zm0ls6alsc3ann27hvgs5mv1wvr4ppk7q8cg4l2"; depends=[htmltools shiny]; }; + shinyjs = derive2 { name="shinyjs"; version="0.9"; sha256="1hh9djpcq80srxxy6ysy3pnwiyc5mx1xmhvs0jacbr3cszq1m6kk"; depends=[digest htmltools jsonlite miniUI shiny]; }; + shinystan = derive2 { name="shinystan"; version="2.3.0"; sha256="1xianpv9s4xjv5lsnagcx7gsnba38psv9kgik9z6k7z9g7bg91rs"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; + shinythemes = derive2 { name="shinythemes"; version="1.1.1"; sha256="0i220y051dq763idh1j5zhpb5cpv3jr11jd9akmry9aadyys5pz6"; depends=[shiny]; }; + shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="0.28"; sha256="1ypqgiqimdwj9fjy9ykk42rnkipb4cvdxy5m9z9jklvk5a7cgrml"; depends=[R6 RCurl RJSONIO]; }; - shotGroups = derive2 { name="shotGroups"; version="0.7"; sha256="0zvwf87xm9dmi10i700nx8qgg314iy6dwd5kv0ziinprma7ivvjv"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; - showtext = derive2 { name="showtext"; version="0.4-4"; sha256="14xvbvch354dwbhr36ih4av9b7f3z2zw2bsbnn5fxxh15lm26wz3"; depends=[showtextdb sysfonts]; }; + shotGroups = derive2 { name="shotGroups"; version="0.7.3"; sha256="0h6c4fz2b4gpbfqykic6apflvp11bcafqm87gzl0zv8b03ydylxk"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; + showtext = derive2 { name="showtext"; version="0.4-6"; sha256="17qx9zlmp440p4a9mkba89k1rdx11hdl5px33m1766hlsv1x7sf8"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="1.0"; sha256="14iv5nyc9wszy1yhbggk7zs042kv10lwk92pn9751hfws53yq6hf"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-2"; sha256="09gbb7f9h3q2p56dwb2813mr36115ah70szq47jimpymzkd2x08m"; depends=[igraph maptools]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; - shuffle = derive2 { name="shuffle"; version="1.0"; sha256="037i45mfys1nr9sqmmsfb2yd3ba3aa22hc701f5j2zp8jx57qn3k"; depends=[]; }; + shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; siRSM = derive2 { name="siRSM"; version="1.1"; sha256="0fx6bfb5c8hdlgjxddwhhzr09ls53kfgn36hjk9zi5z8m14a7wbn"; depends=[doSNOW foreach MASS rsm]; }; siar = derive2 { name="siar"; version="4.2"; sha256="1c4z72jr81dzkp9xqyrrkwjsalvvksl67pnbaadkc52v84fhzx3r"; depends=[bayesm coda hdrcde MASS mnormt spatstat]; }; sideChannelAttack = derive2 { name="sideChannelAttack"; version="1.0-6"; sha256="1xcsy1h8gc8a4f9nzs7zv8x6v55g1pg8vy1kg64iqxm0gnz2f20l"; depends=[ade4 corpcor infotheo MASS mmap]; }; @@ -7176,71 +8991,89 @@ in with self; { sig = derive2 { name="sig"; version="0.0-5"; sha256="084wwpj5mnmq4k98ijbv23z80sj4axadc7c6hn3917dazsaa6ngn"; depends=[]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigloc = derive2 { name="sigloc"; version="0.0.4"; sha256="13v2dlgsbcsqqm8yxls62i7r3sk8m3c78jv8f9lgdihq5pjnd9zp"; depends=[ellipse nleqslv]; }; + sigmoid = derive2 { name="sigmoid"; version="0.2.0"; sha256="0cp16spja60nv6wpj0zg5b4nkj1dg0d0blhrjm4ki5pz9k7lc0g7"; depends=[]; }; signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.4"; sha256="1plyvx0pdid4zydxjwph6v96c8ilzgn55vcdszkslp3a4s2sns65"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; + sigora = derive2 { name="sigora"; version="2.0.1"; sha256="1sgjafr2f7carwnvp0vsvp80jn2bzwlkay38ch63qk9gapsh4imh"; depends=[]; }; + sigr = derive2 { name="sigr"; version="0.1.4"; sha256="0lw7l0dsjv0c4fdl8x0prg91qhbi4lvqfaky38j75w9jw8h9gkq4"; depends=[]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; + simLife = derive2 { name="simLife"; version="0.3"; sha256="0bqhixr4zg7mwgxdsjk0h5a82dyfkhiv9xafw43w2bpnmyxywdia"; depends=[splancs unfoldr]; }; simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; - simPH = derive2 { name="simPH"; version="1.3.5"; sha256="1k2gs8lls287g3zy94h231sf9nljygmb82m4yjc05xglsi8ab0dr"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; - simPop = derive2 { name="simPop"; version="0.3.0"; sha256="0rxlabgdjcbqldk06lzl81fi35qg6s9dw73h3bbwd7x89cbj5q8x"; depends=[colorspace data_table doParallel e1071 foreach laeken lattice MASS nnet party plyr Rcpp vcd VIM]; }; + simPATHy = derive2 { name="simPATHy"; version="0.2"; sha256="0ai5wmjz8k0glbwkclgg3m3ncsjghja4iys2mn1psn3r8gxk79yc"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; + simPH = derive2 { name="simPH"; version="1.3.9"; sha256="0hvg8m0d57x9s8ix7j7v0zdcxxww7bmd2mh8n059da3mph8hf288"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; + simPop = derive2 { name="simPop"; version="0.6.0"; sha256="0ndcwg3yj0n7wyhgs3n02jr7m4sks9n8bjbcgkzrxkqfg6696b62"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp vcd VIM]; }; simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; simTool = derive2 { name="simTool"; version="1.0.3"; sha256="1x018p5mssrhz2ghs3ly9wss12503h93gl7zk0mqh1bcrzximh0k"; depends=[plyr reshape]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; simboot = derive2 { name="simboot"; version="0.2-5"; sha256="0slznwk8i3z76sxbfd4y5rp28jr6jv4i5ynnckpr10i59ba04wlq"; depends=[boot mvtnorm]; }; - simcausal = derive2 { name="simcausal"; version="0.5.0"; sha256="0aqgz09l3ixhmz8k1cfy6185pybxl5ickvz0d3r7il7izsyrwnmv"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; + simcausal = derive2 { name="simcausal"; version="0.5.3"; sha256="1k0cbnkgd8sn5vjvmpa496yir868xldhcnkynfqdcs4qsfywfrzs"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; simctest = derive2 { name="simctest"; version="2.4.1"; sha256="0v4l3dqhr551kr1kivsndk4ynkiaarp8hp65vgng4q8jm60il98c"; depends=[]; }; simecol = derive2 { name="simecol"; version="0.8-7"; sha256="0p6kmv65k3zy5q4v8casc2cp3c2ckblmycd1y1nnn7z7fnd57g8h"; depends=[deSolve minqa]; }; - simest = derive2 { name="simest"; version="0.2"; sha256="15cgm8nk41fnva2camq26dwb1xy8qyk68v4918xszkj25lxb01m3"; depends=[nnls]; }; + simest = derive2 { name="simest"; version="0.3"; sha256="1bxgrr0sncsi1swmj5l4kqyd2v80py50d5xynv6544r1qnfpwk69"; depends=[nnls]; }; simex = derive2 { name="simex"; version="1.5"; sha256="01706vbmfgcg13w1kq8v5rnk5xggbd1n7fv50c6bvhdyc1dly313"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7"; sha256="13w9m35qrrp8kkz4gqp7fg9jv8fs99y19n21bdxsd3f5mlkbvqgl"; depends=[mvtnorm survival]; }; - simmer = derive2 { name="simmer"; version="3.1.2"; sha256="0zxvczxvpi20d4q6vpyiwz4xh5akwlbris5m86nq2s6wzccnmsjb"; depends=[BH magrittr R6 Rcpp]; }; + simmer = derive2 { name="simmer"; version="3.6.0"; sha256="1i7ppj7rf21i5frycmcd9pn51rc702pp3hmyv03cf9rm454v6rc2"; depends=[BH magrittr R6 Rcpp]; }; + simmer_plot = derive2 { name="simmer.plot"; version="0.1.8"; sha256="0r1r88bq4m4qzqyzag3rr67b6cakf4446vdhxqiqc23ky16wl99l"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; simmr = derive2 { name="simmr"; version="0.3"; sha256="18ycrd7qbz7frvd3bgbqaaapslw1jw89fy3np5qyb9sswyk08w9m"; depends=[boot coda compositions ggplot2 MASS reshape2 rjags viridis]; }; simone = derive2 { name="simone"; version="1.0-3"; sha256="1l38xbcf50kjh0k4dc4xsxkjr54jz4s98az99mzcsdarqd6kz9kg"; depends=[mixer]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; }; simpleRCache = derive2 { name="simpleRCache"; version="0.2.2"; sha256="1hbiwk2am56f2vhj5qvajkqwynlch7c857vnpj99497wgy2wxg7z"; depends=[digest]; }; + simpleSetup = derive2 { name="simpleSetup"; version="0.1.0"; sha256="0rbzmixk76b3lgi9m7ijhcl6dha7wbbxfgwdhnp2y338zny6c6rm"; depends=[]; }; simpleboot = derive2 { name="simpleboot"; version="1.1-3"; sha256="1qprjisfflhzg8ll12p3q1zcfdiyc45glic2j9cw9nhx5rb065fk"; depends=[boot]; }; simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; }; - simplexreg = derive2 { name="simplexreg"; version="1.1"; sha256="0iyrkynhrkdix27r105wv0yn5yc8cgrf6hlv4byi9mz6y05f9i7p"; depends=[Formula plotrix]; }; + simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; }; simplr = derive2 { name="simplr"; version="0.1-1"; sha256="14gv2cwygjjfc9yjdrcn68scgyh469kypmf4mqy5p18gsxfj3h1c"; depends=[]; }; - simr = derive2 { name="simr"; version="1.0.1"; sha256="1n7x5q6bwpw7k3bfmc736f37flg5xmiwmaz52w3ayabwljkirbrn"; depends=[binom iterators lme4 plotrix plyr RLRsim stringr]; }; + simputation = derive2 { name="simputation"; version="0.2.1"; sha256="1a0kcwg4jl7xnp9b0hrj2m5mcrvqgxi0283fvw17b11bl7mkh43m"; depends=[gower MASS rpart]; }; + simr = derive2 { name="simr"; version="1.0.2"; sha256="03rbq16x91y79xp1cw8z1b01pv6w0h344g4a9na5xipfm1x97kqf"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; }; simrel = derive2 { name="simrel"; version="1.0-1"; sha256="0905rjqh8c08vyg090h0i7sx89vdryignslldzfz2r5yrszl4ga8"; depends=[FrF2 sfsmisc]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-9"; sha256="0h46acf797lp1hvs8x91nzll3zxiiczfl6vdxxrwizr109jzggcj"; depends=[colorspace gridBase sfsmisc]; }; - simsem = derive2 { name="simsem"; version="0.5-12"; sha256="12zwc7h2rmj0nbrrwd1s70iicf0vs3ld7dn3aq6wda71vgplgc14"; depends=[lavaan]; }; - sinaplot = derive2 { name="sinaplot"; version="0.1.3"; sha256="007f7zqyg48n8v2lwa6ff8cwbvi332cg40fmzlvr3jjms0gsrzbr"; depends=[ggplot2]; }; + simsem = derive2 { name="simsem"; version="0.5-13"; sha256="0v6gbfp4659gbpzc1vffg687c8bcd45ddb7jhd0bgx66m28853kk"; depends=[lavaan]; }; + simstudy = derive2 { name="simstudy"; version="0.1.2"; sha256="08350rd4nd4vckd51n2k4q28p4wi3a366xr2kgrjxr7xpx12m6zw"; depends=[data_table mvnfast Rcpp]; }; + simulator = derive2 { name="simulator"; version="0.2.0"; sha256="18x0c9bf9anbykq9f46fxnnx7g36bh01s4cdmrn7mdygs6ac9c8z"; depends=[magrittr]; }; + sinaplot = derive2 { name="sinaplot"; version="1.0.0"; sha256="1s87ykgad56f7l7janxx1x0y98dycpwk7mflyqxncq46awrd1ai0"; depends=[plyr]; }; siplab = derive2 { name="siplab"; version="1.2"; sha256="0r7gk9qsmbc3ln67cb8p87bq3s2rx6fbavlly1fpzqqv2isf5pq9"; depends=[spatstat]; }; - sirad = derive2 { name="sirad"; version="2.3-1"; sha256="12gnlfbnis5972p4v5ad16srfsfrr0kji40y8jbygcd43f8ka70r"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="1.10-0"; sha256="0s3bkvxc7liclggwcbmr28smh6lbcp8zd2c4qad6f8sbi30bj4l2"; depends=[CDM coda combinat gtools ic_infer igraph lavaan lavaan_survey MASS Matrix mirt mvtnorm pbivnorm plyr psych Rcpp RcppArmadillo sfsmisc sm survey TAM]; }; - sisVIVE = derive2 { name="sisVIVE"; version="1.2"; sha256="03lnk0p97nf4a8rw8ypy3xfzj4idwm00a0gfrkiwb7xq606sl0vb"; depends=[lars]; }; + sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; + sirt = derive2 { name="sirt"; version="1.14-0"; sha256="1dbv1wg16hd34hhsah0bf4rk3jqrr31rmsysjsbhall6mqlkprxz"; depends=[CDM coda combinat gtools ic_infer igraph lavaan lavaan_survey MASS Matrix MCMCpack mirt mvtnorm pbivnorm plyr psych Rcpp RcppArmadillo sfsmisc sm survey TAM]; }; + sisVIVE = derive2 { name="sisVIVE"; version="1.3"; sha256="17q6dl8wiwf01g6jm93w72jvp1madd0fww1yiazjcbkmz0j3kdbl"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; sisus = derive2 { name="sisus"; version="3.9-13"; sha256="0lz9ww07dvdx6l3k5san8gwq09hycc3mqwpgzmr2ya9z8y27zadr"; depends=[coda gdata gtools MASS moments polyapost rcdd RColorBrewer]; }; - sitar = derive2 { name="sitar"; version="1.0.4"; sha256="1kppy6ryzf0mbdwnxwg1syjbnbymbpldcwxki6h213h7pd1gjbn9"; depends=[nlme quantreg]; }; + sitar = derive2 { name="sitar"; version="1.0.9"; sha256="1yjiqykrx0dm0zkssagv50kyp4wj9b0sjmrpgbn9wzimqdb5ijph"; depends=[nlme quantreg]; }; + sitmo = derive2 { name="sitmo"; version="1.0.0"; sha256="11az1zncpnalp1vkyxz75asqk6jd9wsn6kifjcqigm21kg8wcf7j"; depends=[Rcpp]; }; sitools = derive2 { name="sitools"; version="1.4"; sha256="0c0qnvsv06g6v7hxad96fkp9j641v8472mbphvaxa60k3xc7ackb"; depends=[]; }; + sitree = derive2 { name="sitree"; version="0.1-0"; sha256="00np025vj2ckyp9ikv89fm4mrxgqbgq29870dzq3i071ba7r650z"; depends=[data_table]; }; sivipm = derive2 { name="sivipm"; version="1.1-3"; sha256="1l0j1bi38s09ax4kwikk615lyd074gzg1aa1j2jfmhr3igannm3z"; depends=[seqinr]; }; - sjPlot = derive2 { name="sjPlot"; version="1.9.2"; sha256="15nsaxflpkh5njzn6j0hwsrg1ar0zjjwksvwlm4cf33c3a9zgk9v"; depends=[car dplyr effects ggplot2 lme4 magrittr MASS nlme psych scales sjmisc tidyr]; }; - sjdbc = derive2 { name="sjdbc"; version="1.5.0-71"; sha256="0i9wdfadfcabayq78ilcn6x6y5csazbsgd60vssa2hdff0ncgvk1"; depends=[rJava]; }; - sjmisc = derive2 { name="sjmisc"; version="1.6"; sha256="0h1w4il1bj9kw0lx1hjlz60d1m92d9bhrgwg3sz4arizh88j83mf"; depends=[coin dplyr haven lme4 MASS Matrix nlme stringdist tidyr]; }; - skatMeta = derive2 { name="skatMeta"; version="1.4.3"; sha256="0bknv066ya4yl4hl4y02d9lglq2wkl9c2j1shzg3d64dg4sjvbak"; depends=[CompQuadForm coxme Matrix survival]; }; + sizeMat = derive2 { name="sizeMat"; version="0.2.0"; sha256="10ghh7ch33jjchirsbxmj36ig44zncwcmsy7is5vj4pbmhpbz6gv"; depends=[MASS matrixStats mcmc MCMCpack]; }; + sjPlot = derive2 { name="sjPlot"; version="2.3.0"; sha256="0gljrzlz4kcfam0i79qiapj858h9h7w6asrga6812w093f6k9ivi"; depends=[broom dplyr effects ggplot2 lme4 MASS merTools modelr nlme psych purrr scales sjmisc sjstats tibble tidyr]; }; + sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; + sjmisc = derive2 { name="sjmisc"; version="2.3.0"; sha256="06h13sqh7k7dis5b02zqq41wsr0zrwxxkcaaam9jhmbb9k0nq8s1"; depends=[broom dplyr haven psych purrr stringdist stringr tibble tidyr]; }; + sjstats = derive2 { name="sjstats"; version="0.8.0"; sha256="0kg9g7g0d4cy75qfqa9iqs1wkbc7k4lm3sq6nmaq4x1nlc9hrl0r"; depends=[broom coin dplyr lme4 lmtest MASS Matrix modelr nlme purrr sandwich sjmisc tibble tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; - skellam = derive2 { name="skellam"; version="0.1.3"; sha256="1w46ri4k8xg07phl7j4cb5b3qndplr027n047wzc15xcjliggg89"; depends=[]; }; + skeleSim = derive2 { name="skeleSim"; version="0.9.5"; sha256="1m0jwr63v989dalchiv90sfpi6g19rj0x2zgp0bgmjpq3xyamykf"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; + skeletor = derive2 { name="skeletor"; version="1.0.2"; sha256="0xnlhlxdpj1lg7balpwsz5b4d90505al389b288ac81q0wg974rf"; depends=[]; }; + skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; - skmeans = derive2 { name="skmeans"; version="0.2-8"; sha256="0g5hyb1zwjp45j4wqbssdr0mw9fr19b6a35bmsf6xsgbf5asqx6w"; depends=[clue cluster slam]; }; + skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; + skmeans = derive2 { name="skmeans"; version="0.2-10"; sha256="014di97bcrx7lkvpixcy7idgfxaay4sjn7xvvj683a45pkk58h5c"; depends=[clue cluster slam]; }; sla = derive2 { name="sla"; version="0.1"; sha256="0fr5n65ppwsh9z7a6rma9ak0bl8x3nz7v25lij7wb5nrf3sl74yb"; depends=[]; }; - slackr = derive2 { name="slackr"; version="1.2"; sha256="1ymj3x52wyp0mp41xnnycg0vhdmv8whimwk1hzfsqr30pccnvn9j"; depends=[data_table ggplot2 httr jsonlite]; }; - slam = derive2 { name="slam"; version="0.1-32"; sha256="000636dwj4kmj5w1w5s6bqixh78m7262y3fgizj7rfhcnc2gz7ad"; depends=[]; }; - sld = derive2 { name="sld"; version="0.3"; sha256="18xj57v9gg78d894cr1h6wp10i05hrnmwhmq6yh6211kdyj9ljp1"; depends=[lmom]; }; + slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; + slam = derive2 { name="slam"; version="0.1-40"; sha256="1di5qs8sz4bh47653kmjcdbdxir03k3nin8mh817ga9af7aa3b5g"; depends=[]; }; + sld = derive2 { name="sld"; version="0.3.2"; sha256="0za5pw7ki419ni9pqqzddb10d16nvv5rh5jrkl4f77j0ps2ajylp"; depends=[lmom]; }; sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; }; slfm = derive2 { name="slfm"; version="0.2.2"; sha256="01n9y6kyl7z1ynckp2hkrv2yl9jf30zcbbi3sx9jrcha557fg1cf"; depends=[coda lattice Rcpp RcppArmadillo]; }; - slp = derive2 { name="slp"; version="1.0-3"; sha256="09jyrp6y3rigy043d8s5i7nh89pgpvn3cv51mr729c9ccr6jdjb1"; depends=[mgcv]; }; + slim = derive2 { name="slim"; version="0.1.0"; sha256="1d39hcsb6qxi36x7fkl67vy7r8n7ij275z7jnrb2n3pjnqkzjmzi"; depends=[data_table MASS]; }; + slp = derive2 { name="slp"; version="1.0-5"; sha256="0i9iv0s1wdp9cyzr8qixh6c7qvrj025vll13gyf8dfbidrp6hryl"; depends=[mgcv]; }; sm = derive2 { name="sm"; version="2.2-5.4"; sha256="0hnq5s2fv94gaj0nyqc1vjdjd64vsp9z23nqa8hxvjcaf996rwj9"; depends=[]; }; - smaa = derive2 { name="smaa"; version="0.2-4"; sha256="1rp0hib79x1rf2v5h1d2gp6ixq7r8v33qy5bz5sfphi94xwasm7l"; depends=[]; }; + smaa = derive2 { name="smaa"; version="0.2-5"; sha256="1mwahjgslk82f8bl6qcjs1yadhbnqrxxhvkffkgc2fv3s6lh5d9m"; depends=[]; }; smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; }; - smacof = derive2 { name="smacof"; version="1.8-10"; sha256="1wb9rnj39lxa1mcrsgniyrysdzspgcspql3bfaiqsyyqybbp0z1b"; depends=[colorspace Hmisc MASS nnls polynom]; }; + smacof = derive2 { name="smacof"; version="1.8-13"; sha256="0b9kf8z1ll0ak5b9ms2pkv7fl9qhc1nb5cxaarfjc2xi7zkyanyi"; depends=[colorspace Hmisc MASS nnls polynom weights]; }; smacpod = derive2 { name="smacpod"; version="1.4.1"; sha256="17f28nax92nkfgs972gqcjnnz6sw4p8n36rrhx00dy19vr569kp5"; depends=[plotrix SpatialTools spatstat]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; - smam = derive2 { name="smam"; version="0.2-2"; sha256="1p6bzk4b9kpmfs4nxmcgc46hgdpldqg0pzpc0zhvs187z2nrfw75"; depends=[Matrix]; }; + smam = derive2 { name="smam"; version="0.3-0"; sha256="1sdr0ki2y9smiwfglgh97kj6y0n1z3blyyxk823xp3467byk1rnb"; depends=[Matrix numDeriv Rcpp]; }; + smapr = derive2 { name="smapr"; version="0.1.0"; sha256="01nhmr40vivshysq6fjixjaddr7nmimlyim26qf6knvphpl6hrdd"; depends=[httr rappdirs raster rgdal rhdf5 rvest xml2]; }; smart = derive2 { name="smart"; version="1.0.1"; sha256="0ki3qn71zrw0nyv395qijcwahnxyv1p21j8x6cxr9spah2wzz8lb"; depends=[elasticnet gplots gtools igraph Matrix pcaPP PMA]; }; smatr = derive2 { name="smatr"; version="3.4-3"; sha256="0iiazln4albj7k5w67slvyn98cqg4f6k409mml0n1pvlkki0h7gy"; depends=[plyr]; }; - smbinning = derive2 { name="smbinning"; version="0.2"; sha256="1zps1gdn5s7ynbkxmxp5s3xvzixdkcrfyvz5qrv77s4825lkj57x"; depends=[Formula gsubfn partykit sqldf]; }; + smbinning = derive2 { name="smbinning"; version="0.3"; sha256="0993lnp7iks39z4mshh4gdrbvig6pnsc2jag58cbqfh40ignx748"; depends=[Formula gsubfn partykit sqldf]; }; smcUtils = derive2 { name="smcUtils"; version="0.2.2"; sha256="0d1kmg386j0zrpp8vgxjwvpf1i25l86xrh82767xkp0n9qj8srwq"; depends=[]; }; smcfcs = derive2 { name="smcfcs"; version="1.2.1"; sha256="1v143di0y8c0dcsjham1dmsyh1k0583nhw4qzlignxpg8nf6n4xc"; depends=[MASS survival VGAM]; }; smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; @@ -7253,320 +9086,403 @@ in with self; { smfsb = derive2 { name="smfsb"; version="1.1"; sha256="0khd23b6k9zgxz2x6g6c6k2g32mbpli32izdq6fgk1a990kdsp6j"; depends=[]; }; smint = derive2 { name="smint"; version="0.4.2"; sha256="0sfk8r4jzvfs63z1vka280hdmhcbcrspr9zxwc5az9hkj65g1n0f"; depends=[lattice Matrix]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; - smnet = derive2 { name="smnet"; version="2.0"; sha256="0jd574cjkylcrlnlnw859f4vwadi1v955m2lb5z3w3gdpv0lbx3p"; depends=[DBI igraph RSQLite spam SSN]; }; - smoof = derive2 { name="smoof"; version="1.3"; sha256="0b8hs12xvqkr5kkzlbc8rq4zmm6ndmzxhm07zzapsnqckp55g8v7"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D RColorBrewer Rcpp RcppArmadillo]; }; + smnet = derive2 { name="smnet"; version="2.1"; sha256="1jqcgm098kdsrgwrpjry0l6rg8ql7cigxk54svs3170x1fvxa3il"; depends=[DBI RSQLite spam SSN]; }; + smoof = derive2 { name="smoof"; version="1.4"; sha256="18li9l62lmpsva0whw6d5wr46w90w3z70wywiy785sla00g06sp2"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo]; }; + smooth = derive2 { name="smooth"; version="1.6.3"; sha256="0b7gdy0bjnaqn4djflxzkjx036jqn8izlc344yvsvybw5gysavl8"; depends=[nloptr Rcpp RcppArmadillo zoo]; }; + smoothAPC = derive2 { name="smoothAPC"; version="0.1"; sha256="06lpjp408ggj27yw6mw7f96kxly7r8kzikbsdp0y1gzig1qq8nbs"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothSurv = derive2 { name="smoothSurv"; version="1.6"; sha256="1s25gpih0nh8waw4r3iw53n3rc44mlzixkh4i2cykbg5rdrs8pnf"; depends=[survival]; }; smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; - smoothtail = derive2 { name="smoothtail"; version="2.0.4"; sha256="0wbz9r9a7a3pjkdrsxhkjfm2qrbz4jrpsx4s1vm3kz7czkh55yg7"; depends=[logcondens]; }; + smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; + smotefamily = derive2 { name="smotefamily"; version="1.0"; sha256="0jh8fmhn8c9v3c4lb3nniiagy1d4shfix4fr7jpyw4q69mh0vn0h"; depends=[]; }; sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; }; smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; - sn = derive2 { name="sn"; version="1.3-0"; sha256="00q58zssf32581m8ni5qazqy3wq36p4fya985ibn1607w76w8vwj"; depends=[mnormt numDeriv]; }; - sna = derive2 { name="sna"; version="2.3-2"; sha256="1dmdv1bi22gg4qdrjkdzdc51qsbb2bg4hn47b50lxnrywdj1b5jy"; depends=[]; }; + sn = derive2 { name="sn"; version="1.5-0"; sha256="0fh7xjsfd2x8d9lbnss7raldh24b72b3pvcv7zqa1qprzg7zfr01"; depends=[mnormt numDeriv]; }; + sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; - snht = derive2 { name="snht"; version="1.0.3"; sha256="1yc4c9liaali0p6k5m30l0lavbcc0wdf0wrmxwcvsh1rzc16p8iv"; depends=[ggplot2 gridExtra mgcv mvtnorm plyr reshape2 zoo]; }; + snht = derive2 { name="snht"; version="1.0.4"; sha256="01gdqicvazfd27f992j4ngv60sqywwplilqxwrsw21wi7y7c6cfv"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; snipEM = derive2 { name="snipEM"; version="1.0"; sha256="0f98c3ycl0g0l3sgjgk7xrjp6ss7n8zzlyzvpcb6agc60cnw3w03"; depends=[GSE MASS mvtnorm Rcpp RcppArmadillo]; }; snn = derive2 { name="snn"; version="1.1"; sha256="0yywn3v1iz9xizwli3gmzprkx66b5a813mbp8hq2vsj8n4lfj8r5"; depends=[]; }; - snow = derive2 { name="snow"; version="0.4-1"; sha256="19r2yq8aqw99vwyx81p6ay4afsfqffal1wzvizk3dj882s2n4j8w"; depends=[]; }; + snow = derive2 { name="snow"; version="0.4-2"; sha256="1mxbrkpnmq32x4wd0194d541661yvfrrjlr3lsf7qq53ms3h21zf"; depends=[]; }; snowFT = derive2 { name="snowFT"; version="1.4-0"; sha256="0gw2kn80jh1a6sg6ni9kj6ikvyq29c9dmx52k9m6gzcfpa7l0qbk"; depends=[rlecuyer snow]; }; - snowboot = derive2 { name="snowboot"; version="0.5.0"; sha256="1fwvgqx5d54libaf13w9szbh471zi0krc03knp0sz99j0i6nwy20"; depends=[igraph VGAM]; }; + snowboot = derive2 { name="snowboot"; version="0.5.2"; sha256="07mly89x9mj5cvpmi45xmlr4d1l1d2fdcagmniviqqqhmllc50pi"; depends=[igraph Rcpp VGAM]; }; snowfall = derive2 { name="snowfall"; version="1.84-6.1"; sha256="13941rlw1jsdjsndp1plzj1cq5aqravizkrqn6l25r9im7rnsi2w"; depends=[snow]; }; snp_plotter = derive2 { name="snp.plotter"; version="0.5.1"; sha256="16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"; depends=[genetics]; }; snpEnrichment = derive2 { name="snpEnrichment"; version="1.7.0"; sha256="1lja1n26nr8lgbca2kraryv933jwa2w3h41appzylflf0w3liz9y"; depends=[ggplot2 snpStats]; }; snpRF = derive2 { name="snpRF"; version="0.4"; sha256="1amxc4jprrc6n5w5h9jm2as025gqdqkla2asz7x97sjdnnj9kzzn"; depends=[]; }; snpStatsWriter = derive2 { name="snpStatsWriter"; version="1.5-6"; sha256="04qhng888yih8gc7yd6rrxvvqf98x3c2xxz22gkwqx59waqd4jlq"; depends=[colorspace snpStats]; }; snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; }; - snplist = derive2 { name="snplist"; version="0.15"; sha256="1xak7j6cbp8wapa99v38nzlhdc31ywfqjn4a7s9ibh2nb0plbjla"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; - sns = derive2 { name="sns"; version="1.1.0"; sha256="1pppf1h39kv8jjngkcrq091ldzz3knjgcn81gfg7y54yndb2mapr"; depends=[coda mvtnorm numDeriv]; }; + snplist = derive2 { name="snplist"; version="0.17"; sha256="0h419r4b62wdf63z12ai1n9zd3n36l9vgrbvlg1m72bbzrj5k8yz"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; + sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; }; sodavis = derive2 { name="sodavis"; version="0.1"; sha256="1cci7aq2yqxb97ah5nycmhvg3d47fsicdgmgnw4yz88y61b3ndll"; depends=[MASS nnet]; }; - sodium = derive2 { name="sodium"; version="0.2"; sha256="0y8piyjp09b2d9b3w7csikxrrf9aa8rdyi9awd73sxh9dj8l4452"; depends=[]; }; + sodium = derive2 { name="sodium"; version="0.4"; sha256="09xfla0227dx3354nm0pgkwa6322ifnxydxwmlc25s1vb7mjkk1s"; depends=[]; }; + sofa = derive2 { name="sofa"; version="0.2.0"; sha256="0jjc3r25qprxrhwwzx4b70i51v8gygxwx3x9d1zydx9hw1plk0mb"; depends=[httr jsonlite mime R6]; }; softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; - softclassval = derive2 { name="softclassval"; version="1.0-20150416"; sha256="1zrf0nmyy4pfs4dzardghzznw1ahl21w4nykfh2pp8il4dpi21fs"; depends=[arrayhelpers svUnit]; }; + softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; + softmaxreg = derive2 { name="softmaxreg"; version="1.2"; sha256="0y1r4n83sv2744lpli65aip0c0cq823asb8gw9yy9yjjc9sbyr9s"; depends=[]; }; soil_spec = derive2 { name="soil.spec"; version="2.1.4"; sha256="129iqr6fdvlchq56jmy34s6qc2j5fcfir6pa5as5prw0djyvbdv0"; depends=[GSIF hexView KernSmooth pls sp wavelets]; }; - soilDB = derive2 { name="soilDB"; version="1.7"; sha256="1wyawqwab4y3xg6bz7180xflxrwzr27bgsjnni7lpsjsa65mqid1"; depends=[aqp Hmisc plyr reshape sp XML]; }; + soilDB = derive2 { name="soilDB"; version="1.8-7"; sha256="0v0f9yngqjsagk5dw734aigwhld7fpadj6521bdk49j74ha0girr"; depends=[aqp Hmisc plyr raster reshape2 sp XML]; }; soilphysics = derive2 { name="soilphysics"; version="3.0"; sha256="1b6wzdb63qq0h1aaw08i2qg7410997i2cszr012g5f4dnmrwamln"; depends=[boot MASS rpanel tkrplot]; }; soilprofile = derive2 { name="soilprofile"; version="1.0"; sha256="0sdfg6m2m6rb11hj017jx2lzcgk6llb01994x749s0qhzxmvx9mb"; depends=[aqp lattice munsell splancs]; }; - soiltexture = derive2 { name="soiltexture"; version="1.3.3"; sha256="1a0j10f6mxwrslqd4fvc1nqvsh47ly1nyhc6l0qq1iz6ffqd37mx"; depends=[MASS sp]; }; + soiltexture = derive2 { name="soiltexture"; version="1.4.1"; sha256="1rvrji3xrs6smxcgggl6phnbx595wl1s2d8djnvzfca20k9q6a1q"; depends=[MASS sp]; }; soilwater = derive2 { name="soilwater"; version="1.0.2"; sha256="0rkyh7rcaapp1bxih88ivbaqnrig9jy32694jbg8z04b115hmdpm"; depends=[]; }; - solaR = derive2 { name="solaR"; version="0.41"; sha256="003f8dka0jqlfshzc3d4z9frq5jb5nq6sw3sm44x7rj79w3ynpyg"; depends=[lattice latticeExtra RColorBrewer zoo]; }; + solaR = derive2 { name="solaR"; version="0.44"; sha256="1waxi2zfns4dh1vpsl3khbgaw07icp4f1ax9l0pry9qipmk0nk3k"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; }; solidearthtide = derive2 { name="solidearthtide"; version="1.0.2"; sha256="0274f7vyjymx6hd7ik68hznip57ni4cxp1bw7z91v1jzp3ch17rv"; depends=[]; }; solr = derive2 { name="solr"; version="0.1.6"; sha256="0hlysi1yw4l98dcb1shznzrgia9pqzfj0p1hmnfz5gz2j64lf4h4"; depends=[assertthat httr plyr rjson XML]; }; - solrium = derive2 { name="solrium"; version="0.3.0"; sha256="0y70qkj9wyrvfc8a9c1936ibbjcpic2wib2a2jc094cigf6wgz5r"; depends=[dplyr httr jsonlite plyr XML]; }; - som = derive2 { name="som"; version="0.3-5"; sha256="01xsysmqj0zhzifqpwcrs0mflh56ndv4q3nm5n5imx7wmzx2lrzp"; depends=[]; }; + solrium = derive2 { name="solrium"; version="0.4.0"; sha256="1jjvwwgyq335mhc4pff2l604x1k2260zwxl6k6k9lfzgcgqylbbw"; depends=[dplyr httr jsonlite plyr tibble xml2]; }; + solvebio = derive2 { name="solvebio"; version="0.3.0"; sha256="1y3raw38888jii2c4x1mvdwscyss8qc9fpyl96y0hpmxj4yg1d4l"; depends=[httr jsonlite]; }; + som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; + som_nn = derive2 { name="som.nn"; version="1.0.3"; sha256="1viyw7gyfglnpqxamzqxsph876006bx0hbkjb8psi3v71wi014i2"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="1.3"; sha256="06rzsq1f3s4kpsyx7dl1459r4b5h1nqp085f8z3m0arkn7qpv7jk"; depends=[MASS Matrix matrixcalc plotrix RColorBrewer]; }; + sommer = derive2 { name="sommer"; version="2.5"; sha256="02a2j43nppzpbh0zqkq79yqys79jsmwql7nsijxlz27b847wf3pz"; depends=[MASS Matrix]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; + sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.4"; sha256="1v46xzx3jxxxs2biyrq6xbv2lhpz1i95la93hj6dl4jfyikmx0im"; depends=[]; }; + sonify = derive2 { name="sonify"; version="0.0-1"; sha256="1wkqqgf8fhhaz1dmri2zzr8cdwmx3cgrxbprrz3yily5r1m17d15"; depends=[tuneR]; }; soobench = derive2 { name="soobench"; version="1.0-73"; sha256="1y2r061pd4kr0kdgp8db3qy2aj07jdiyvy2py4fmwg6b8pcf9y0l"; depends=[]; }; - soql = derive2 { name="soql"; version="0.1"; sha256="0i6vawsdbnbxsxh5la1yr895a21sgp02fr1nvc7mawfv54and7x0"; depends=[]; }; + sophisthse = derive2 { name="sophisthse"; version="0.7.0"; sha256="08vr5y5cvn2q7410krg7620cqv7jmprh96bv43yhh3mk6ixd21dl"; depends=[dplyr RCurl stringr XML zoo]; }; + soql = derive2 { name="soql"; version="0.1.1"; sha256="12wvbxy9xx140b7mga4ma7hkg4q6kv549gkq15fnf4dn8q43x8nf"; depends=[]; }; sortinghat = derive2 { name="sortinghat"; version="0.1"; sha256="1wrxwhdp3gj1ra0rgldnmc0w019bnjb6z9j20c5p1ab09x4dmlny"; depends=[bdsmatrix MASS mvtnorm]; }; sorvi = derive2 { name="sorvi"; version="0.7.26"; sha256="19lfrc4bdiljs437w3a2bpf7abnkv0934dh929bbj2w1w8rzghjn"; depends=[dplyr ggplot2 RColorBrewer reshape2]; }; - sos = derive2 { name="sos"; version="1.3-8"; sha256="0vcgq8hpgdnlmkxc7qh1jqigr0gvm9x3w4ijbhma7x4i5fx3c2il"; depends=[brew]; }; + sos = derive2 { name="sos"; version="1.4-1"; sha256="13swys0bzcxsbr4vg0svs6ans7jdyphcyjix70brmmk6l309y8c0"; depends=[brew]; }; sos4R = derive2 { name="sos4R"; version="0.2-11"; sha256="0r4lficx8wr0bsd510z4cp6la32xf928rsiznbywpxghnypsrcgg"; depends=[RCurl sp XML]; }; sotkanet = derive2 { name="sotkanet"; version="0.9.21"; sha256="0x3dg38i2naf270qjc7dzmvf32ziihsa6m8yv1wh0l7sbk78h7cv"; depends=[RCurl rjson]; }; - soundecology = derive2 { name="soundecology"; version="1.3.1"; sha256="07ncas8rn55pfqgj66qdwp28wh1v9yb8rkr36anc55a6svqx6g89"; depends=[ineq oce pracma seewave tuneR vegan]; }; + sound = derive2 { name="sound"; version="1.4.4"; sha256="1mxwcr978k11p0dznv1gbvb894nixkl4gvhgj015gcl1s63ar5n4"; depends=[]; }; + soundecology = derive2 { name="soundecology"; version="1.3.2"; sha256="1ig04hdxwailsp4lv5y9q73x7vb6hl4dw9zlb05gbccvid5vmdsh"; depends=[ineq oce pracma seewave tuneR vegan]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; - sourcetools = derive2 { name="sourcetools"; version="0.1.2"; sha256="03jzag3xd68vp0d3mh5wc6ihx6710wrprf5952h1lannj6zj4cks"; depends=[]; }; - sp = derive2 { name="sp"; version="1.2-2"; sha256="0104xibkj78522rg0h2wkckfgzswxngqkpzi6vfpjm60c8n6m872"; depends=[lattice]; }; + sourceR = derive2 { name="sourceR"; version="1.0.0"; sha256="118v608cimphsm5p84f1j1i3s6yv0xa7qfqrd13j59pvzbfbplka"; depends=[cluster dplyr gplots gtools hashmap R6 SPIn uuid]; }; + sourcetools = derive2 { name="sourcetools"; version="0.1.5"; sha256="0jx6kslygfqaic3cmjwag3dy98q1a2dw20cz7z8agsknmmbk6dy2"; depends=[]; }; + sp = derive2 { name="sp"; version="1.2-4"; sha256="0crba3j00mb2xv2yk60rpa57gn97xq4ql3a6p9cjzqjxzv2cknk2"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; + sp500SlidingWindow = derive2 { name="sp500SlidingWindow"; version="0.1.0"; sha256="0m4fg7vwscm1575zq7s8sycr742lbwwhcr7s4gm4vcawz9sfvhkl"; depends=[dplyr FinCal gdata lubridate magrittr]; }; + spAddins = derive2 { name="spAddins"; version="0.1.7"; sha256="1ci246770j40zzmsjwjqwkwi6b2w5qwb0n4f4wah5rjf6zjwkd5r"; depends=[rstudioapi]; }; spBayes = derive2 { name="spBayes"; version="0.3-9"; sha256="1zdyz5jqbixwj59q9f1x8f3knz0jwdfl0abj0w6cxrllkb38yg10"; depends=[abind coda Formula magic]; }; - spBayesSurv = derive2 { name="spBayesSurv"; version="1.0.3"; sha256="1vglfqqk4pg8kc6jnnw7br2lvwmz7szcpfqms95ij3bmawhazhrw"; depends=[coda Rcpp RcppArmadillo survival]; }; - spMC = derive2 { name="spMC"; version="0.3.6"; sha256="0h71m55jmv80kx5ccsrpsakrh4qw5f3kx2qizwi10jlybwggqv0m"; depends=[]; }; + spBayesSurv = derive2 { name="spBayesSurv"; version="1.0.6"; sha256="1k9d8saab2isj60z5kffb7i8f1ymp7327m15gpinw0wv1m9wn11p"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; + spMC = derive2 { name="spMC"; version="0.3.8"; sha256="1glkyv6wmh766ssdlm4z7dck32r0284kwah0ksmmkwxkfw1qx7xb"; depends=[]; }; spTDyn = derive2 { name="spTDyn"; version="1.0"; sha256="0yrnbf9g1n1hrrra2vp6412wfky1bhy3b6raif9k82xvi9p9m6pz"; depends=[coda sp]; }; - spTest = derive2 { name="spTest"; version="0.2.3"; sha256="0pbmwm5k59vk0fg0qyirdn94v3x4k984bvifamaplr68s0x13i4b"; depends=[fields]; }; + spTest = derive2 { name="spTest"; version="0.2.4"; sha256="1pfyrim6m0pcwsxpin9z09569yzil49hsz5mndp723c9wkk8vn5h"; depends=[geoR sp]; }; spThin = derive2 { name="spThin"; version="0.1.0"; sha256="06qbk0qiaw7ly1ywbr4cnkmqfasymr7gbhvq8jjbljm0l69fgjpp"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="2.0-1"; sha256="15yrbxx44cqphhr71b5hiimwwjiwwpzny16xjb87nn2lc4mb53by"; depends=[coda sp]; }; spa = derive2 { name="spa"; version="2.0"; sha256="1np50qiiy3481xs8w0xfmyfl3aypikl1i1w8aa5n2qr16ksxrnq3"; depends=[cluster MASS]; }; - spaMM = derive2 { name="spaMM"; version="1.7.2"; sha256="07rwsk1yviphiw7jipx045y6806vzadx9ddzrm6mhhx879dn1j2q"; depends=[geometry lpSolveAPI MASS Matrix mvtnorm nlme proxy Rcpp RcppEigen]; }; - spaa = derive2 { name="spaa"; version="0.2.1"; sha256="0qlfbfvv97avbnixm5dz9il3dmd40wnpvv33jh7fa0mh740bircy"; depends=[]; }; + spaMM = derive2 { name="spaMM"; version="1.10.0"; sha256="1lr2y1pcbwpggq5fkfnbz76q0iixy9vj23akj2s9a7d6hxs01ya3"; depends=[geometry lpSolveAPI MASS Matrix mvtnorm nlme nloptr proxy Rcpp RcppEigen]; }; + spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; }; spaceExt = derive2 { name="spaceExt"; version="1.0"; sha256="0lp8qmb7vcgxqqpsi89zjy7kxpibg3x2mq205pjmsrbbh7saqzr4"; depends=[glasso limSolve]; }; spacejam = derive2 { name="spacejam"; version="1.1"; sha256="1mdxmfa1aifh3h279cklm4inin0cx3h0z2lm738bai34j6hpvar7"; depends=[igraph Matrix]; }; - spacetime = derive2 { name="spacetime"; version="1.1-5"; sha256="0r6ycr0apm12dahw9x00jrxjdwp3888wnbdi02dr3s3imxlfxkrz"; depends=[intervals lattice sp xts zoo]; }; + spacetime = derive2 { name="spacetime"; version="1.2-0"; sha256="1qd9bvnqknw8kaqz7xr5gkkhi3h1f2dvd70zax44g912nha13f7h"; depends=[intervals lattice sp xts zoo]; }; spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; }; spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; }; - spam = derive2 { name="spam"; version="1.3-0"; sha256="1zw3c26dj3pj61mnb2xdfzvvlsiandfqax1zacg0cc4pd1d1g342"; depends=[]; }; + spaero = derive2 { name="spaero"; version="0.2.0"; sha256="0srkah89z23j30y2smlnyhf97mm123apma8vgmgfarbx188bkwpn"; depends=[]; }; + spam = derive2 { name="spam"; version="1.4-0"; sha256="0c278q2rmrxwhax58n8987j3rlg7c8bnxnn8r96y9kv4hjj1pjsk"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanr = derive2 { name="spanr"; version="1.0"; sha256="1x29hky347kvmk9q75884vf6msgcmfi3w4lyarq99aasi442n1ps"; depends=[plyr stringr survival]; }; sparc = derive2 { name="sparc"; version="0.9.0"; sha256="0jsirrkmvrfxav9sphk8a4n52fg0d1vnk3i8m804i4xl0s7lrg8s"; depends=[]; }; sparcl = derive2 { name="sparcl"; version="1.0.3"; sha256="1348pi8akx1k6b7cf4bhpm4jqr5v8l5k086c7s6rbi5p6qlpsrvz"; depends=[]; }; spareserver = derive2 { name="spareserver"; version="1.0.1"; sha256="094q5i6v4v37hzfdyps8zni394z312r802hl04jw0xzzps922rq4"; depends=[assertthat httr pingr]; }; spark = derive2 { name="spark"; version="1.0.1"; sha256="03viih0r7bpv6zkm5ckk0c99lf2iv0fkgrzkbs1gg7ki9qyxji8c"; depends=[magrittr]; }; - sparkTable = derive2 { name="sparkTable"; version="1.2.0"; sha256="0hmdri8738gqn1dd9flqh1icd0r5mwnx4wnww0nwyr4anzxz2say"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; + spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.2"; sha256="1kvzfjhf1q5jzlq5d04s7d96j63vnvqqrh8s03rwkl79h1dhqhhp"; depends=[sparklyr]; }; + sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; + sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; + sparklyr = derive2 { name="sparklyr"; version="0.5.2"; sha256="0h09xjvq6sq7az5cxkac5840av2vgngp7b05gdrgc26d3x2qvpvm"; depends=[assertthat base64enc config DBI digest dplyr httr jsonlite lazyeval rappdirs readr rprojroot withr]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; + sparkwarc = derive2 { name="sparkwarc"; version="0.1.1"; sha256="07b66f12fz19042kj7d9p32j9sy3103zvil36xkf21hm9iyg6xph"; depends=[DBI sparklyr]; }; sparr = derive2 { name="sparr"; version="0.3-8"; sha256="1vsfk769f6227wrxfpq3qbs9h8farfnmgq94pl2ra4hgvpvygsmr"; depends=[MASS rgl spatstat]; }; sparseBC = derive2 { name="sparseBC"; version="1.1"; sha256="1w60n2875n809lbrn0hd4kdmsyfd64aikgzxchza8b59x77l0psy"; depends=[fields glasso]; }; - sparseLDA = derive2 { name="sparseLDA"; version="0.1-7"; sha256="1rjjkvs9s25v85rdaxln8gnb88jhdj8s8lw8qxrjsgcgms7nvlqx"; depends=[elasticnet MASS mda]; }; + sparseFLMM = derive2 { name="sparseFLMM"; version="0.1.0"; sha256="1wrpjhb20mrkg9a5302phy4hrn5qfndjl78dx1v4a811clgfid8q"; depends=[data_table MASS Matrix mgcv refund]; }; + sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.2"; sha256="1zn0nrdlgynxhq48cx8zi8bk2ir6zvfg1pgxr6j479j88q8hcjb3"; depends=[Matrix Rcpp RcppEigen]; }; + sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; }; sparseLTSEigen = derive2 { name="sparseLTSEigen"; version="0.2.0"; sha256="11llmrkq0pnrdphgjvhmg269bq3xbbn4s7kd7xhvk62sigvspkcj"; depends=[Rcpp RcppEigen robustHD]; }; sparseMVN = derive2 { name="sparseMVN"; version="0.2.0"; sha256="12g387bvpy4249kwq946v006ab095zsmgfsrkc1yqncxhmjwrgqn"; depends=[Matrix]; }; sparseSEM = derive2 { name="sparseSEM"; version="2.5"; sha256="0ig8apsi94kvbcq3i8nzmywbdizlss7c6r9bppcyl9lxgikc3cds"; depends=[]; }; sparseSVM = derive2 { name="sparseSVM"; version="1.1-2"; sha256="1bv9ipfs275vr1hmz7g7w4rimvbkg15wjh3xj3cx1zam91k384k9"; depends=[]; }; - sparsediscrim = derive2 { name="sparsediscrim"; version="0.2"; sha256="0m8ccmqpg1np738njavf736qh917hd3blywyzc3vwa1xl59wqccl"; depends=[bdsmatrix corpcor mvtnorm]; }; + sparsebn = derive2 { name="sparsebn"; version="0.0.2"; sha256="116m32rb1m7bbvkhiwb1270h7jirp3ysck6gij054igqprm4lq74"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; + sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.3"; sha256="1qgnqad6klhzg80hmk48bws0yabd3akw7vs2v3sfrwx4ckl3h4ii"; depends=[Matrix nnet]; }; + sparsediscrim = derive2 { name="sparsediscrim"; version="0.2.3"; sha256="1sh6g1086l040547yajgyp4hq8yzlspdb6jmw4w1sv0zsmca25sv"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm]; }; sparsenet = derive2 { name="sparsenet"; version="1.2"; sha256="106a2q4syrcnmicrx92gnbsf2i5ml7pidwghrpl6926glj59j248"; depends=[glmnet shape]; }; + sparsepp = derive2 { name="sparsepp"; version="0.1.1"; sha256="0wzj4z333ns18a1byii601fp46dlq9q4dbprkc95yl30xpzmdx0b"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; + sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; }; + sparsesvd = derive2 { name="sparsesvd"; version="0.1-1"; sha256="09qpky8vxkpycj6c4vn3nqlidhblgksh3n6w8sww4yhn0pm3rzn5"; depends=[Matrix]; }; + sparsevar = derive2 { name="sparsevar"; version="0.0.10"; sha256="069r0kbypmx7pw3z2v9l17qidw3d73rzf5zs6yn1adyvpsddjxi8"; depends=[doParallel flare ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; spartan = derive2 { name="spartan"; version="2.3"; sha256="09j5f9f068m83279ncfxpyg8bnk25qjz20a9xlap8dpm50iidr24"; depends=[]; }; + spass = derive2 { name="spass"; version="1.0"; sha256="1pgv4yzbdv475gp53qz40ys731v9960cyxbp84gff6y5f2y4axah"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; spatcounts = derive2 { name="spatcounts"; version="1.1"; sha256="0rp8054aiwc62r1m3l4v5dh3cavbs5h2yb01453bw9rwis1pj2qm"; depends=[]; }; - spate = derive2 { name="spate"; version="1.4"; sha256="1cr63qm3hgz6viw6ynzjv7q5ckfsan7zhbp224gz4cgx5yjg0pn3"; depends=[mvtnorm truncnorm]; }; + spate = derive2 { name="spate"; version="1.5"; sha256="1hlh4iwx1lrl8r2gag33z2xdv6k4hg86ch4f0jlqnqkhm9hapshf"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.0"; sha256="04p2hlwb9rwck2v2j4hlf87wlqx1vz1czmljpk3xw3f0b1pf26sc"; depends=[Matrix Rcpp rgl]; }; spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; }; spatial_gev_bma = derive2 { name="spatial.gev.bma"; version="1.0"; sha256="1rjn0gsbgiv69brhnm0zj25ya3nyfh4yf6jizng85mvss3viv3hj"; depends=[coda msm SpatialExtremes]; }; spatial_tools = derive2 { name="spatial.tools"; version="1.4.8"; sha256="0qnsjfx974na87p3n7sp711sc13v6dmpvb2kjpvscixs8rsy03y1"; depends=[abind doParallel foreach iterators mmap raster rgdal]; }; + spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; }; spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; }; - spatialEco = derive2 { name="spatialEco"; version="0.1-4"; sha256="086qf081gkwm507qqqiklwbj2jk8kqgnijhd7wi8mdvz3ilam0j3"; depends=[cluster RANN raster RCurl rgeos rms SDMTools sp spatstat spdep yaImpute]; }; + spatialEco = derive2 { name="spatialEco"; version="0.1-5"; sha256="04d6dqmayfs19922s1pg1rsi5b4hdj50665qkp02p0wbbnnkhvs4"; depends=[cluster RANN raster RCurl rgeos rms SDMTools sp SpatialPack spatstat spdep yaImpute]; }; spatialTailDep = derive2 { name="spatialTailDep"; version="1.0.2"; sha256="107yldc43pgbadxdisnc7vq8vyvcps1b1isyvxd0kyf59xldiq47"; depends=[cubature mvtnorm SpatialExtremes]; }; spatialfil = derive2 { name="spatialfil"; version="0.15"; sha256="01fbn9zblz7rjsgqy3ikdqpf0p0idvb6m96mf7m7qi2ps5f48vzj"; depends=[abind fields]; }; spatialkernel = derive2 { name="spatialkernel"; version="0.4-19"; sha256="0gbl6lrbaxzv2f975k0vd6ghrljgf1kjazld3hm7781kv1f87lji"; depends=[]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; - spatialsegregation = derive2 { name="spatialsegregation"; version="2.40"; sha256="0kpna2198nrj93bjsdgvj85wnjfj18psdq919fjnnhbzgzdkxs7l"; depends=[spatstat]; }; - spatstat = derive2 { name="spatstat"; version="1.45-0"; sha256="0ilvj3kskrxy93wrl3a883r3x25mqzsy834hzqrq9cqmgnaryw1r"; depends=[abind deldir goftest Matrix mgcv nlme polyclip tensor]; }; - spatsurv = derive2 { name="spatsurv"; version="0.9-11"; sha256="0wmjzccrx2k88i7kbxlxv8ig602b1k9pqb2hn3wxq1l4d8m4izw9"; depends=[fields geostatsp iterators Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; + spatialsegregation = derive2 { name="spatialsegregation"; version="2.43"; sha256="1jwjgpyy0dpghjwallqvi20bb84ljrn2qmdb35r5l243da511n8f"; depends=[spatstat]; }; + spatstat = derive2 { name="spatstat"; version="1.49-0"; sha256="0il36ljlql7xc00w8czydv529xjmi7c7fb30sr2k9mr7chln64bf"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart tensor]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="1.3-2"; sha256="0hky45v7hsg1anqvv5i0s6hndms18g5y9fbgy6r59yy7mybh6j4d"; depends=[]; }; + spatsurv = derive2 { name="spatsurv"; version="0.9-14"; sha256="1pd2dz7y64wi7bkw6nlnm6nyzkjk3pfxp2a3fmd3xrrp7fgsy7xk"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; + spbabel = derive2 { name="spbabel"; version="0.4.5"; sha256="0qgng4w0jjm5rkq0arw4icv6xp9fhpv0b0kmy4wzh54qr3zhh2ja"; depends=[dplyr sp tibble]; }; spc = derive2 { name="spc"; version="0.5.3"; sha256="0y730vh04j4cyz5zfyx4xqfw07ic1l93197640q543adnmil40vf"; depends=[]; }; - spcadjust = derive2 { name="spcadjust"; version="1.0"; sha256="1p011x3g1awb2sajg19fhkyrf5d8w4h9qwckxxl1i23jk3kpkyjh"; depends=[]; }; + spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; spcosa = derive2 { name="spcosa"; version="0.3-6"; sha256="0zj5yr0by1pbixs4z6w3c6yr1k55k5gqmvjkwiq2gsgq00vs7q94"; depends=[ggplot2 rJava sp]; }; spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; - spcr = derive2 { name="spcr"; version="1.2.1"; sha256="0cm59cfw3c24i1br08fdzsz426ldljxb41pdrmbmma4a69jkv1sb"; depends=[]; }; + spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; - spdep = derive2 { name="spdep"; version="0.5-92"; sha256="1b5l6sfscnamfh957n3srgwc50f98az3071dcpqrhk4g4n2ws6yg"; depends=[boot coda deldir LearnBayes MASS Matrix nlme sp]; }; - spduration = derive2 { name="spduration"; version="0.15.0"; sha256="1kziinnmn119s43brjpraw5vbsjv41gf031iaq9nhln1qbd2kv5j"; depends=[corpcor MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; + spdep = derive2 { name="spdep"; version="0.6-10"; sha256="0d94irvrpwlxsc7rw56lj8h72wigpxrsk3gsy6n37zr5l1yc2k5k"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sp]; }; + spdownscale = derive2 { name="spdownscale"; version="0.1.0"; sha256="0pl560km9629iwy13h7359ab7ixzs09hg986kvk0xbnc348srb86"; depends=[]; }; + spdplyr = derive2 { name="spdplyr"; version="0.1.2"; sha256="056rdnz6qj24x8gl3aigcd84rk5c06r76wkcgn1rkaacs5b20qmq"; depends=[dplyr lazyeval sp spbabel tibble]; }; + spduration = derive2 { name="spduration"; version="0.15.1"; sha256="1kjr3vncns91ha1q3q1xp2ss12m80k5hixzccm1ggdc77ha3bjhv"; depends=[corpcor MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; spdynmod = derive2 { name="spdynmod"; version="1.1.3"; sha256="0qh0kkxs6hk344k3fys0g9yy0xl0kwnwl18bgiak53fd1k7whskq"; depends=[animation deSolve raster sp]; }; spe = derive2 { name="spe"; version="1.1.2"; sha256="0xyx42n3gcsgqmy80nc9la6p6gq07anpzx0afwffyx9fv20fvys0"; depends=[]; }; - speaq = derive2 { name="speaq"; version="1.2.1"; sha256="0glvw1jdyc8w8b8m7l74d0rl74xfs4zmanmx4i41l7ynswhmqm01"; depends=[MassSpecWavelet]; }; + speaq = derive2 { name="speaq"; version="1.2.2"; sha256="03f6w575n8c8whi2hcxwspfs65112ykbwyn5nhx3r7x3dyqpk9v1"; depends=[MassSpecWavelet]; }; + speaq2 = derive2 { name="speaq2"; version="0.1.0"; sha256="0rrqh90vqi7l1nbwivzvygd292nnkgk26nyh2kw71pl3gfakmnml"; depends=[cluster data_table doSNOW foreach MassSpecWavelet mQTL]; }; speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; speciesgeocodeR = derive2 { name="speciesgeocodeR"; version="1.0-4"; sha256="033877l9sxcvvzpyf9aw19sj8qfscim663j2y2az8bl9c79xw4ph"; depends=[maps raster sp]; }; specificity = derive2 { name="specificity"; version="0.1.1"; sha256="1gvlyx9crkzm3yyp1ln5j9czcg83k7grm6ijabhl919gjjr1p60n"; depends=[car]; }; specmine = derive2 { name="specmine"; version="1.0"; sha256="1dd8ymyq3894br2fv54r1z93aifh2iiz94a3r4xj1qq07005hr29"; depends=[baseline caret ChemoSpec compare ellipse genefilter GGally ggdendro ggplot2 hyperSpec impute MAIT MASS Metrics pcaPP pls qdap RColorBrewer rgl scatterplot3d xcms]; }; + spectral = derive2 { name="spectral"; version="1.0.1"; sha256="0mawgxz1gbzgb3lxm6gfbv3wan0ykziprqym8ajvdjsdq4fwkk2m"; depends=[rasterImage Rcpp]; }; spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; - speedglm = derive2 { name="speedglm"; version="0.3-1"; sha256="0zkzy17fjxcchh48dapjf856vn3la7sx1ki4v1w8cwapz634wz2j"; depends=[MASS Matrix]; }; + speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; + spef = derive2 { name="spef"; version="1.0-1"; sha256="0nf6kw5w6ifv2xp515cmd7p8l2dd224vzhh3fzcvykibqk49fdsp"; depends=[ggplot2 nleqslv plyr survival]; }; speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; }; + spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; }; sperrorest = derive2 { name="sperrorest"; version="0.2-1"; sha256="17jq8r98pq3hsyiinxg30lddxwpwi696srsvm3lfxrzk11076j6v"; depends=[ROCR rpart]; }; - spfrontier = derive2 { name="spfrontier"; version="0.1.12"; sha256="1jy1604gppis7vbn55pv13bywy1aqwzshwj03bbfln0qxikzqzi0"; depends=[ezsim maxLik moments mvtnorm spdep tmvtnorm]; }; + spex = derive2 { name="spex"; version="0.1.0"; sha256="1d4dbj87ka7hrl4kmxll3al58i3k3ynxkmy25g95by6v8dfn7zb5"; depends=[raster sp]; }; + spfrontier = derive2 { name="spfrontier"; version="0.2.3"; sha256="0br54kkva4m3yyqfjh3cs5wf4kk3ax6yg0h8cl5qiy38dvssa5qd"; depends=[ezsim moments mvtnorm numDeriv optimx spdep tmvtnorm]; }; + spftir = derive2 { name="spftir"; version="0.1.0"; sha256="07vw8igy698jx671cj6hmf6ll9xvaq81fb6la7j95pqbd6jl284z"; depends=[pracma]; }; spgrass6 = derive2 { name="spgrass6"; version="0.8-9"; sha256="05xvdhisad0d7c69mvahzg6pvgvmb6dph50r34981palykic7qhn"; depends=[sp XML]; }; spgs = derive2 { name="spgs"; version="1.0"; sha256="1f75dvp6m5w5phg158ykvl4myvw6q4vysb2pc3bgm0f9fpcadfip"; depends=[]; }; - spgwr = derive2 { name="spgwr"; version="0.6-28"; sha256="1gwyfwsz9n7bz0n6sp6qd8qcl23r2i2kb38csxsh3pkrinnxy181"; depends=[sp]; }; + spgwr = derive2 { name="spgwr"; version="0.6-29"; sha256="05rw1ck2gf5c0aqpagcfijxghslppa6xdz7pnwanfclwq8ri1xqa"; depends=[sp]; }; sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.6"; sha256="0149wkak7lp2hj69d83rn05fzh9bsvyc1kyg0d3b69sx92kqlwr0"; depends=[Matrix nlme sp spdep]; }; spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; spider = derive2 { name="spider"; version="1.3-0"; sha256="1p6f8mlm055xq3qwa4bqn9kvq60p8fn2w0cc6qcr22cblm5ww7jp"; depends=[ape pegas]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-11"; sha256="1f16jvdj6kbiiypnbbj10nj7l88kkrxasrribqpjv7ai62dlximn"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; + spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; - splancs = derive2 { name="splancs"; version="2.01-38"; sha256="12x68i5yjq9526rsf2awp97yg19izkhcc8iha0ys65bmhzjc5hwf"; depends=[sp]; }; + splancs = derive2 { name="splancs"; version="2.01-39"; sha256="1lyzs7lbhw1pqmb4mr46ncm39wwrmin7qgshsr384j4023qwfqwd"; depends=[sp]; }; + splines2 = derive2 { name="splines2"; version="0.2.5"; sha256="048c43dhrri0xc02897jxgqw7c5ai2nyylhx3bvwsqg0hrj3c7rv"; depends=[]; }; + splitfngr = derive2 { name="splitfngr"; version="0.1.1"; sha256="0gz65acnkil9xjspl2kzpzyhj7lslga9g3p0k79xh25ia6qal5ws"; depends=[lbfgs]; }; splitstackshape = derive2 { name="splitstackshape"; version="1.4.2"; sha256="0m9karfh0pcy0jj3dzq87vybxv9gmcrq5m2k7byxpki95apbrsmg"; depends=[data_table]; }; - splm = derive2 { name="splm"; version="1.3-7"; sha256="1bfi80vg129v8d0vp7sigbhskl227lmbry1vmklvcczrjqf2bh45"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; + splm = derive2 { name="splm"; version="1.4-6"; sha256="1vclsx622zq7kdgb84dd74i6a1b27d0jnx29blzba77d24adyzmh"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; spls = derive2 { name="spls"; version="2.2-1"; sha256="0zgk9qd825zqgikpkg13jm8hi6ncg48qw5f985bi145nwy9j19xs"; depends=[MASS nnet pls]; }; - splus2R = derive2 { name="splus2R"; version="1.2-0"; sha256="0kmyr1azyh0m518kzwvvgz7hv1x5myj37xn7w2gfn0vbn5xl8pv1"; depends=[]; }; - splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-135"; sha256="0hghggdcr70vfjx4npj37nmd96qvgrp1gpwa9bznvjkvyfawwy6i"; depends=[]; }; - splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-73"; sha256="1csk0ffgg1bi2k1m2bbxl6aqqqxf6i8sc8d4azip8ck7rn8vya46"; depends=[splusTimeDate]; }; - spm12r = derive2 { name="spm12r"; version="1.1.1"; sha256="1zvf05jfqnimxqj39cmg35hjhnqc5hvkirai11silyiy5aya8ka4"; depends=[fslr git2r matlabr oro_nifti R_utils stringr]; }; + splus2R = derive2 { name="splus2R"; version="1.2-2"; sha256="0xrbj8vxy0pc6hl7m8abv71d3hjw47cl51s7j7priadyqczkq6sz"; depends=[]; }; + splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-137"; sha256="0bpzv6a05hnqnnz2znnkb3f34r56krhc595zjnn82azxj4a53njh"; depends=[]; }; + splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-74"; sha256="0aikw6ckc0a7lrgjlcdmqspgrx0fc4iysd7jynd2lsf1hxy4pz35"; depends=[splusTimeDate]; }; + spm12r = derive2 { name="spm12r"; version="2.0"; sha256="1bwc9mygsamlzp4f6a1ahycvwxpwap1bi55rm5y6p5hhr331gckf"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; - spocc = derive2 { name="spocc"; version="0.4.5"; sha256="1lzs3x3dvjava2bylc0q0isavkh2sk1a85nswmj8rapfa261fzza"; depends=[data_table httr jsonlite lubridate rbison rebird rgbif ridigbio rvertnet V8 whisker]; }; - spoccutils = derive2 { name="spoccutils"; version="0.1.0"; sha256="1al7hydwwzqd8ky91ggklf7lk42g79cx24i47gapd84jnwmmkq56"; depends=[ggmap ggplot2 gistr httr leafletR RColorBrewer rworldmap sp spocc]; }; + spocc = derive2 { name="spocc"; version="0.6.0"; sha256="0xrwwac2d8j4c4qy6br9l6i9bqlqbmzmq34dp25xwhw1nla6mhvs"; depends=[data_table httr jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble V8 whisker]; }; + spongecake = derive2 { name="spongecake"; version="0.1.1"; sha256="1bf2106ik4dp9xl68s8wzj5w6yl3syx8i39zxpp24rywb6f2i8n0"; depends=[ggplot2 jpeg magrittr plyr]; }; sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; spray = derive2 { name="spray"; version="1.0"; sha256="12iv1sksxmac2ykrb8psfnaa9lzq6djv0a7a1x73jr3nflvrx9bh"; depends=[magic partitions Rcpp]; }; - sprex = derive2 { name="sprex"; version="1.1"; sha256="1lwkdi8g1dlfdnxxvspgpz6f5h2gml176xhfrcxa9gcy3y9rlcpm"; depends=[]; }; + sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; sprint = derive2 { name="sprint"; version="1.0.7"; sha256="1yzx1qjpxx9yc0hbm1mmha5b7aq13iflq66af597b7yj6abm7zjp"; depends=[boot e1071 ff randomForest rlecuyer]; }; sprinter = derive2 { name="sprinter"; version="1.1.0"; sha256="12v4l4fxijh2d46yzs0w4235a8raip5rfbxskl0dw7701ryh7n8g"; depends=[CoxBoost GAMBoost LogicReg randomForestSRC survival]; }; - sprintfr = derive2 { name="sprintfr"; version="0.1.0"; sha256="1jkrgvnybd2799alfrrd91bb7rdm8w0snx45brgrzlmwfvdrbfc7"; depends=[dplyr lazyeval magrittr stringi tidyr]; }; sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; }; sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; }; spsann = derive2 { name="spsann"; version="2.0-0"; sha256="1if86d9qm9b2798284axlkp35zxgzmzvp2816i5fqxn50j8fcqy3"; depends=[pedometrics Rcpp sp SpatialTools]; }; + spselect = derive2 { name="spselect"; version="0.0.1"; sha256="02aiml4dh40n6yl52ypramn4847ykdi4y5lhsmchnnp4nnnqycsn"; depends=[magic pracma tester]; }; spsi = derive2 { name="spsi"; version="0.1"; sha256="0q995hdp7knic6nca0kf5yzkvv8rsskisbzpkh9pijxjmp1wnjrx"; depends=[plot3D]; }; spsmooth = derive2 { name="spsmooth"; version="1.1-3"; sha256="09b740586zyi8npq0bmy8qifs9rq0rzhs9c300fr6pjpc7134xn4"; depends=[mgcv]; }; - spsurvey = derive2 { name="spsurvey"; version="3.1"; sha256="1dgrrar6k87xgcxhj3xi0zap5shr26d4hv6k3pfjihbwvygf82z8"; depends=[deldir foreign MASS rgeos sp]; }; + spsurvey = derive2 { name="spsurvey"; version="3.3"; sha256="1xpjimqkrwm77amqza4713psmg86bvz08gxdi35advq4w614f2w1"; depends=[deldir foreign Hmisc MASS rgeos sp]; }; spt = derive2 { name="spt"; version="1.13-8-8"; sha256="18s74pxfmsjaj92z2a34nq90caf61s84c616yv33a0xvfvp32qr5"; depends=[]; }; - sptm = derive2 { name="sptm"; version="14.10-11"; sha256="1g7dqfsyy0cvv3idx16bpny9z4f638aprbc50x8kk4zfk3km7wnr"; depends=[kyotil survey survival]; }; + sptm = derive2 { name="sptm"; version="16.7-9"; sha256="0x8824zccrwdl38jbhq8skzcvxb7a3b1zggkd7gmyjd94xvxll9k"; depends=[kyotil survey survival]; }; spuRs = derive2 { name="spuRs"; version="2.0.0"; sha256="0lbc3nny6idijdaxrxfkfrn40bxfyp9z3yl9mwb1k6cyd10v5mfj"; depends=[lattice MASS]; }; sqldf = derive2 { name="sqldf"; version="0.4-10"; sha256="0n8yvrg3gjgbc3vzq0vlf7fwhgm28kwf0jv25qy44x21n6fg11h7"; depends=[chron DBI gsubfn proto RSQLite]; }; sqliter = derive2 { name="sqliter"; version="0.1.0"; sha256="17jjljq60szz0m8p2wc5l56659aap7an5gknc848dp89ycjgj3zx"; depends=[DBI functional RSQLite stringr]; }; + sqlscore = derive2 { name="sqlscore"; version="0.1.1"; sha256="140g2kgfqcw6x3lq7bs90kvdx9kj81fr86hpcbg6dn3i8xslwrad"; depends=[dplyr]; }; sqlutils = derive2 { name="sqlutils"; version="1.2"; sha256="0dq4idg8i4hv9xg8jllllizqf3s75pdfm1wgncdjj52xhxh169pf"; depends=[DBI roxygen2 stringr]; }; squash = derive2 { name="squash"; version="1.0.7"; sha256="1wdnzagibh9fz7a3x6m4ixckh7493shvwxg7cn5kpnfzf8m1imyj"; depends=[]; }; + squid = derive2 { name="squid"; version="0.1.1"; sha256="0qv9lazgiqazhq096ybmllalm2l2h794ry4p1r93c10msxg37sdp"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; }; srd = derive2 { name="srd"; version="1.0"; sha256="04j2gj7fn7p2rm34haayswrfhn6w5lln439d07m9g4c020kqqsr3"; depends=[animation colorspace plyr stringr survival]; }; - srvyr = derive2 { name="srvyr"; version="0.1.0"; sha256="0ppa8h4k49gmn0gmlmh7zn1lqpirh9p4zrj19vhw9x3fgca1klsc"; depends=[dplyr lazyeval magrittr survey]; }; - ss3sim = derive2 { name="ss3sim"; version="0.9.0"; sha256="1fnjrxjcb76g9xwa05lwhwkwxaxp03zfgzq9dy7jbibcclblh7a1"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; - ssa = derive2 { name="ssa"; version="1.1.0"; sha256="0jmnm7vhdz0v2shhcibfajpdzh23jpq4snjkdz7kgfh8g4yr0r2f"; depends=[]; }; + srvyr = derive2 { name="srvyr"; version="0.2.0"; sha256="0znhwp6111p4icrpgn22k48qlicxgripz3wslhmmkwydq00ndz9w"; depends=[dplyr lazyeval magrittr survey tibble]; }; + ss3sim = derive2 { name="ss3sim"; version="0.9.3"; sha256="0l2xd0d4hgz0b42fz7zf5dgd71fm5dsvhys4hg8c7j2nzzzx9hdk"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; + ssa = derive2 { name="ssa"; version="1.2.1"; sha256="10x58c57pa9x6svm4h4xrss72ikin9lpf3ihjwmnkgnaicvsd0bx"; depends=[iterators]; }; ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; }; + ssc = derive2 { name="ssc"; version="1.0"; sha256="1hhlpcm1mdwkcxrprk5nc2yi3l69lz13av50y3cyz5vj73jhsg44"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; ssfit = derive2 { name="ssfit"; version="1.1"; sha256="1fais0msi2ppgfp0vbx3qri7s9zs51i7n90w36xkwwac4f46bq5y"; depends=[survey]; }; ssh_utils = derive2 { name="ssh.utils"; version="1.0"; sha256="08313zzzgcyvzkrkq0w0yf748ya1a9shx5xnan5891v0lah9v0b1"; depends=[stringr]; }; ssize_fdr = derive2 { name="ssize.fdr"; version="1.2"; sha256="0y723lwsnmk3rxbhlsrny9hiy07a5p255ygy9qkj6mri64gk1hby"; depends=[]; }; - ssizeRNA = derive2 { name="ssizeRNA"; version="1.2.4"; sha256="0v7ca1xsnpx7zbgwx8196y13wdnlbxdrc4nv2r7m797anj9sjj6a"; depends=[Biobase edgeR limma MASS qvalue ssize_fdr]; }; + ssizeRNA = derive2 { name="ssizeRNA"; version="1.2.9"; sha256="1916r0hmhpfa0p1s8myqk8g4i8fgjqkm4wvpb4nf3sl69kfdva95"; depends=[Biobase edgeR limma MASS qvalue ssize_fdr]; }; + ssmn = derive2 { name="ssmn"; version="1.1"; sha256="1rab9yjb05g5rphqlhwvdwmsyqlv1f4m0rqxfv8c5pbh170nbwbc"; depends=[mnormt moments sn truncdist]; }; ssmrob = derive2 { name="ssmrob"; version="0.4"; sha256="1inndspir7571f54kalbj0h599v9k6dxdmp0n1l5r3a62vn45hd3"; depends=[MASS mvtnorm robustbase sampleSelection]; }; + ssmsn = derive2 { name="ssmsn"; version="0.2.0"; sha256="0fzqdkqhj5hh8pzcwh7i0rglgdq22a5mriyis8r1vhlkdc7n5m39"; depends=[MCMCpack]; }; sspline = derive2 { name="sspline"; version="0.1-6"; sha256="0d6ms8szyn39c7v0397d5ar2hrl8v1l2b7m8hlj37hgp70b9s55h"; depends=[]; }; sspse = derive2 { name="sspse"; version="0.5-1"; sha256="0gih9d0g4kp08c4v01p699lavb491khyj16i8vldhcb194bvs8m5"; depends=[coda]; }; - sss = derive2 { name="sss"; version="0.0-11"; sha256="0k7p1ws0w7wg9wyxcg1zpk8q6kr32l3jl6yd9r4qmzq04dwqrdgz"; depends=[plyr XML]; }; + sss = derive2 { name="sss"; version="0.0-14"; sha256="19xq1pj4lrlh68fi2vy8cjg9xhmykwibm9rcg9snfc1qc6kp062x"; depends=[XML]; }; ssvd = derive2 { name="ssvd"; version="1.0"; sha256="1fdpr38qi59ijrz16jixn6ii1hvmxfjirjqfcp7dxrqz9nx8x0sk"; depends=[]; }; - ssym = derive2 { name="ssym"; version="1.5.5"; sha256="1j2dm2q3bcg8r9nxhmdrsi3azwhyv3q8nsj1bvz8507hzg3qvnxf"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; + ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; + stR = derive2 { name="stR"; version="0.3"; sha256="0zad25s9wp4lapkww3rdbqsd4y7p8xhz9is7avq400srxakinx7n"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; - stabledist = derive2 { name="stabledist"; version="0.7-0"; sha256="06xd3kkyand0gzyj5phxlfjyygn5jlsq7gbwh62pc390by7ld2c7"; depends=[]; }; - stabs = derive2 { name="stabs"; version="0.5-1"; sha256="0mlwbf8wf38mr39si31i4iz00hpsmchbhgagwgsf3x9422zpq92p"; depends=[]; }; + stable = derive2 { name="stable"; version="1.1.2"; sha256="11irpn0qfblzskdr71991jlmdrbqqqpszppn5pii3lr5hflqqr1d"; depends=[rmutil]; }; + stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; }; + stablespec = derive2 { name="stablespec"; version="0.2.3"; sha256="1amscsnsgv1jz1h2arvc5k6lrvzasb58m65lid0qw6k8pvxr9155"; depends=[ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; }; + stabs = derive2 { name="stabs"; version="0.6-2"; sha256="0alzdj3lciggi9g3fj2lgdjb60dz6077nn4nb4wwd5nv7walp4sl"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.1.2"; sha256="1psw96iscgsx11drmcnh0yjg2jjcaa4akmywh337i6gbgam8kj61"; depends=[]; }; - stacomirtools = derive2 { name="stacomirtools"; version="0.3"; sha256="1lbbnvmilf3j3hyhvpkyjd4b4sf3zwygilb8x0kjn2jfhkxnx4c1"; depends=[RODBC xtable]; }; + stacomirtools = derive2 { name="stacomirtools"; version="0.5.0"; sha256="1jq392dcv72r78iv4nd4scidn83l9wglgdzjcj8afr9d0ybdz3gk"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; + stampr = derive2 { name="stampr"; version="0.1"; sha256="1w7zp5n41gzahv4psdgw5a5mylcxlf12931fnjz0q2cwqj9cwql5"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; stargazer = derive2 { name="stargazer"; version="5.2"; sha256="0nikfkzjr44piv8hng5ak4f8d7q78f2znw2df0gy223kis8q2hsd"; depends=[]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; - startupmsg = derive2 { name="startupmsg"; version="0.9"; sha256="1l75w4v1cf4kkb05akhgzk5n77zsj6h20ds8y0aa6kd2208zxd9f"; depends=[]; }; - stashR = derive2 { name="stashR"; version="0.3-5"; sha256="1lnpi1vb043aj4b9vmmy56anj4344709986b27hqaqk5ajzq9c3w"; depends=[digest filehash]; }; - statar = derive2 { name="statar"; version="0.6.0"; sha256="08pkjhn8g6f6jjx8gilmb9k2jdrkd8n17dgk2q7x5yjiviib1h00"; depends=[data_table dplyr ggplot2 lazyeval matrixStats stargazer stringr tidyr]; }; - statcheck = derive2 { name="statcheck"; version="1.0.1"; sha256="01b40bjagkj6hfyq9ppdlaafwgykv8p9s8sm0abd3if82ivdpixj"; depends=[plyr]; }; + starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; }; + startup = derive2 { name="startup"; version="0.5.0"; sha256="1zhnvg47r4dgm85lvzgcacn2vlfz4pk4r1b263x9mg2ccjwpn8ld"; depends=[]; }; + startupmsg = derive2 { name="startupmsg"; version="0.9.3"; sha256="0i7j412xhyq6pk0gb5pp53sa455fwzpjyfd331j2d5qwk8dhrbh3"; depends=[]; }; + statar = derive2 { name="statar"; version="0.6.2"; sha256="1p1a17mc6zy5yffybf5q156yyr52mq0z4vmqss05hq3hlaygbbxz"; depends=[data_table dplyr ggplot2 lazyeval matrixStats stringr tidyr]; }; + statcheck = derive2 { name="statcheck"; version="1.2.2"; sha256="0bcv8klp75q8hlmwhax9lxx9i0kbhsz8442acbhxh5fn2pn2x9jm"; depends=[ggplot2 plyr]; }; + statcomp = derive2 { name="statcomp"; version="0.0.1.1000"; sha256="0ac4s8a955ka0rs2a3k93aq2cxzrc48ai0sl9kn4yaqcw1arv2ap"; depends=[zoo]; }; statebins = derive2 { name="statebins"; version="1.2.2"; sha256="0qfs796dk5x983qah32w3npv9mxzljp3g7kffdd0ansn3z7i1zbb"; depends=[ggplot2 gridExtra RColorBrewer scales]; }; - statfi = derive2 { name="statfi"; version="0.9.8"; sha256="0kg9bj2mmd95ysg604rcg4szqx3whbqm14fwivnd110jgfy20gk2"; depends=[pxR]; }; stationaRy = derive2 { name="stationaRy"; version="0.4.1"; sha256="1iyzg40vi1l4s68kh50in1p97pcb28z6n932cgrx5k1rv3api13g"; depends=[downloader dplyr leaflet lubridate plyr progress readr stringr]; }; - statmod = derive2 { name="statmod"; version="1.4.24"; sha256="0vvjj5qgykk8abkj25g92kvm9sx5s10ysm5dh4ywlmz2lzfi3ilf"; depends=[]; }; - statnet = derive2 { name="statnet"; version="2015.11.0"; sha256="0blrf7ag309d5h00w0zvcwbzif6s3nz5flazqrgkkykscn99kjxl"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm]; }; + statip = derive2 { name="statip"; version="0.1.4"; sha256="1vy3433rrifcix1m28lizbik3qrl2krdldbvmqfyp046xxf2inc1"; depends=[bazar dplyr]; }; + statisticalModeling = derive2 { name="statisticalModeling"; version="0.3.0"; sha256="018ap1hbv4m6y0c71f807apbb9bhr64kcfrn4w8ahhb2520l4mf8"; depends=[ggplot2 lazyeval magrittr mosaic rpart]; }; + statmod = derive2 { name="statmod"; version="1.4.27"; sha256="14yilq9d3z20hig4rs8bjqyydw3dfx90mhmzvw9w8p16h0s595sn"; depends=[]; }; + statnet = derive2 { name="statnet"; version="2016.9"; sha256="1j5z7awvac3sb66ma1lrc9j23m6hmzqfnqxc0znsm36h324y3y6s"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm]; }; statnet_common = derive2 { name="statnet.common"; version="3.3.0"; sha256="190gwkbzd1qh3d7v1xi13snp83jkpvsl7x4ac9x1pxybn3kw856p"; depends=[]; }; statnetWeb = derive2 { name="statnetWeb"; version="0.4.0"; sha256="0gqvvpz9435wakpgf5jsznwgd3fix1vyabh87bnnfsm3pfs7rf2x"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; - stdReg = derive2 { name="stdReg"; version="1.0"; sha256="1rixqpbbqcqfjm8nn3plypzhz38fcw9ryyvr0aq10vbymbxjx0jv"; depends=[data_table survival]; }; + statprograms = derive2 { name="statprograms"; version="0.1.0"; sha256="1jm8vnzccx34rhypkc5brx52k0f0g4z9cckzib43i5fcqd4skib6"; depends=[]; }; + statquotes = derive2 { name="statquotes"; version="0.2"; sha256="05qsffbgpgzrhk2nbyfa4a63ad06aj09bzcc11h9dl3sdz6jj7gr"; depends=[stringr tidytext wordcloud]; }; + stcov = derive2 { name="stcov"; version="0.1.0"; sha256="166w929sgd7nanw1zjhzwv50hd5vqhgsrgxnsga4dzrcvndalw70"; depends=[]; }; + stdReg = derive2 { name="stdReg"; version="2.1"; sha256="0h9h64vk52l7ai50f4pih0qdshsqsx5cm3fj1fjrcpbsfq7azg34"; depends=[data_table survival]; }; + stddiff = derive2 { name="stddiff"; version="1.0"; sha256="0jzl7khnmx0809x9b9nf1n7dj7yknfcblgsf7cpslvglrdzppp42"; depends=[]; }; + stdvectors = derive2 { name="stdvectors"; version="0.0.5"; sha256="0gxylknr146qyg9aj22md076cdhrsz75dg25a1hx8525cm71nwd6"; depends=[Rcpp]; }; steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; }; stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; }; + stepPenal = derive2 { name="stepPenal"; version="0.1"; sha256="09viapb4846g91jzf9364rdyd865b19v83pwcdm3p3xsjry9ffxk"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; stepPlr = derive2 { name="stepPlr"; version="0.92"; sha256="16j32sk7ri4jdgss7vw5zz7s42rxk7rs376iyxzzpy1zcc9b64rv"; depends=[]; }; - stepR = derive2 { name="stepR"; version="1.0-3"; sha256="0c35bb6ba507cgjhzz7dnzidsjxd9r01r355b85j2fcsvcj4agwg"; depends=[]; }; + stepR = derive2 { name="stepR"; version="1.0-6"; sha256="1ywczjidcw1f7318rn3y73b12c1ck0947m6npn6k41y3i47dgh4i"; depends=[]; }; stepp = derive2 { name="stepp"; version="3.0-11"; sha256="0jrwfvcgh3sjm3zag93kjyny2qqsyiw988vnx6jw7s31bv9g0d6s"; depends=[car survival]; }; stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; stheoreme = derive2 { name="stheoreme"; version="1.2"; sha256="14w3jcbs8y8cz44xlq8yybr2jwgk3w7s2msgjhlp1vazy8959s65"; depends=[]; }; + sticky = derive2 { name="sticky"; version="0.4.0"; sha256="0ba7pjvavhm1jp5rk6szvi5d6fmy6z7n9z3qs2kxcraww8aa1gg8"; depends=[]; }; stilt = derive2 { name="stilt"; version="1.0.1"; sha256="1vrbbic0vqzgy574kzcr38iqyhax4wa6zl6w74n65z15map2fyma"; depends=[fields]; }; stima = derive2 { name="stima"; version="1.1"; sha256="1i8l7pfnqxx660h3r2jf6a9bj5ikg9hw7v8apwk98ms8l7q77p5l"; depends=[rpart]; }; stinepack = derive2 { name="stinepack"; version="1.3"; sha256="0kjpcjqkwndqs7cyc6w62z1nnkqmhkifz2w0bi341jh0ybmak4fq"; depends=[]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; stm = derive2 { name="stm"; version="1.1.3"; sha256="09r95d6xw2b4q063x1j2a6wc9kyzphqc2dhfmlc9crir8fah9ayr"; depends=[glmnet lda Matrix matrixStats Rcpp RcppArmadillo slam stringr]; }; stmBrowser = derive2 { name="stmBrowser"; version="1.0"; sha256="0jfh0c835a2sxn2cqlmwdlzj2g2dmkfl2z3pkv4fc1ajggw2n7g2"; depends=[httr jsonlite rjson stm]; }; - stmCorrViz = derive2 { name="stmCorrViz"; version="1.2"; sha256="0mhwl64hv4hjq72mqnvc5ii94aibmc0fw5rmdrvsad4bj6gg67p3"; depends=[jsonlite stm]; }; + stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; + stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochprofML = derive2 { name="stochprofML"; version="1.2"; sha256="0gqfm2l2hq1dy3cvg9v2ksphydqdmaj8lppl5s5as2khnh6bd1l1"; depends=[MASS numDeriv]; }; - stochvol = derive2 { name="stochvol"; version="1.2.3"; sha256="122jw21qx44rpmrr5dbi4f98951b25ifj6277pfr4s4l4rsdkypz"; depends=[coda Rcpp RcppArmadillo]; }; + stochvol = derive2 { name="stochvol"; version="1.3.2"; sha256="08vn2ifbb7yc3b7c5pgklp9wr98vx1gv60gpsqba32xr6ijn49vd"; depends=[coda Rcpp RcppArmadillo]; }; stockPortfolio = derive2 { name="stockPortfolio"; version="1.2"; sha256="0k5ss6lf9yhcvc4hwqmcfpdn6qkbq5kaw0arldkl46391kac3bd1"; depends=[]; }; stocks = derive2 { name="stocks"; version="1.1.1"; sha256="1qwd16bw40w2ns7b0n9wm8l344r4vyk27rmg0vr5512zsrcjkcfb"; depends=[rbenchmark Rcpp]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; - storr = derive2 { name="storr"; version="1.0.0"; sha256="0q10g2x0g3jrvdv49bbjw5qaf9gmsrl5x7fws2liflqf3k2f5kfj"; depends=[digest R6]; }; + stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.0"; sha256="1pxkb0ijx04c4bk6szxhj8lxq6x76m8pyhxpf8xq63h4gh57fxh3"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; }; + storr = derive2 { name="storr"; version="1.0.1"; sha256="1yc4z151dnbhcim7gvkylss239wcc7xlpjrfdc6qv8mf2gq1bv30"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.12"; sha256="0c4sj5iirm542hx782izfdmy2m3kl5q28l10xjj0ib4xn5y6yx3c"; depends=[Rcpp tcltk2]; }; - stplanr = derive2 { name="stplanr"; version="0.1.1"; sha256="0fcyirhx4lxlwizrl9spblnqp8nv11xzjk90kbq3k0i7gpvrrbh8"; depends=[dplyr geosphere httr igraph jsonlite leaflet lubridate magrittr maptools openxlsx R_utils raster Rcpp RcppArmadillo RCurl readr rgdal rgeos RgoogleMaps sp stringi stringr]; }; - stpm = derive2 { name="stpm"; version="1.1.2"; sha256="0n875h6x31wcslqnqwwwl4gf18v4wgm18alw7fsdgwjjz5wdj3yx"; depends=[mice nloptr Rcpp RcppArmadillo sas7bdat survival]; }; + stplanr = derive2 { name="stplanr"; version="0.1.7-3"; sha256="07ap68vfksdyh29hqqhdq5mx17sppp6yqcx94swaryd51mc7rl72"; depends=[doParallel dplyr foreach geosphere httr igraph jsonlite lubridate maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos RgoogleMaps sp stringi stringr]; }; + stpm = derive2 { name="stpm"; version="1.6.0"; sha256="1jfx9nkw66dhwrphqx9rpml53plzd5a831qmxz0012fkji9m0423"; depends=[mice nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="1.0-5"; sha256="1444dbwm0nyb5k8xjfrm25x984a7h9ln2vddrwjszfpmscv0iwm1"; depends=[KernSmooth spatstat splancs]; }; stppResid = derive2 { name="stppResid"; version="1.1"; sha256="0hgzsyy5y0sqd4d2agdr7p2kq0w51vs8f63dvj6j49h8cvgiws2x"; depends=[cubature deldir splancs]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; - strataG = derive2 { name="strataG"; version="0.9.4"; sha256="0lxp6s0gfqxyla7mx19fbx6w8am3islv02iyyixi94xbwphpcqf3"; depends=[ape MASS pegas Rcpp reshape2]; }; + strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; + strataG = derive2 { name="strataG"; version="1.0.5"; sha256="1q3b06hkkwdbh3zvd1lbsklwl8jm743bf17fnvdr8npxgpgqci15"; depends=[adegenet ape apex copula ggplot2 Hmisc pegas phangorn RColorBrewer Rcpp reshape2 swfscMisc]; }; + strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-5"; sha256="0cgr49gvh12s6rr43878jxjkir7b7absqgbfsvj1bjlf2r3gyqy9"; depends=[]; }; stratigraph = derive2 { name="stratigraph"; version="0.66"; sha256="1idn5rwar9pxp1vsra68wrlhagmc92y5rs7vn4h63p35p357qdwz"; depends=[]; }; straweib = derive2 { name="straweib"; version="1.0"; sha256="0bh2f4n4i7fiki52sa57v96757qw1gn1lcn7vgxmc5hk5rzp2mi8"; depends=[]; }; - stream = derive2 { name="stream"; version="1.2-2"; sha256="1gkbgggdvmm2vimy2kffib3ca0z36fyy1x91anfg692xznb2qrrs"; depends=[animation clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; + stream = derive2 { name="stream"; version="1.2-3"; sha256="0ngsbnm8zy2nzvsdbbqg1lyd9l0k537ql7y8ck85hmwxj7nxna4b"; depends=[animation clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; streamMOA = derive2 { name="streamMOA"; version="1.1-2"; sha256="0mg113v8zy6kh67hm91xfd9kd1x8vvvx03svhz70nz9npw00pvlz"; depends=[rJava stream]; }; streamR = derive2 { name="streamR"; version="0.2.1"; sha256="1ml33mj7zqlzfyyam23xk5d25jkm3qr7rfj2kc5j5vgsih6kr0gl"; depends=[RCurl rjson]; }; - stremo = derive2 { name="stremo"; version="0.2"; sha256="13b9xnd8ykxrm8gnakh0ixbsb7yppqv3isga8dsz473wzy82y6h1"; depends=[lavaan MASS numDeriv]; }; + stremr = derive2 { name="stremr"; version="0.4"; sha256="0n8ickmzjqlxwrz8dsphh1nsbnsgp4mnwm52i5ji099ps5292f65"; depends=[assertthat data_table pander R6 Rcpp rmarkdown speedglm stringr zoo]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; - stringdist = derive2 { name="stringdist"; version="0.9.4.1"; sha256="0a2j1h5kf0p14d117rq8fv6qbk8nwsianmkb73d0f6cb1ikadnmg"; depends=[]; }; + stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; + stringdist = derive2 { name="stringdist"; version="0.9.4.4"; sha256="1qngrhin1kqkjkfla7hp7ch0sfzi4nhaxgyzskmy51sz4llq5n4p"; depends=[]; }; + stringformattr = derive2 { name="stringformattr"; version="0.1.1"; sha256="16kkmb933v8pzc4gwz4x2nm51sj82slwpxmmn6p6p8dq5nfzmx5q"; depends=[stringr]; }; stringgaussnet = derive2 { name="stringgaussnet"; version="1.1"; sha256="161fi78cd7yddbcq71z3fgx1q2sacg1n1ggrkrqz17icwzviqrh5"; depends=[AnnotationDbi biomaRt GO_db httr igraph limma org_Hs_eg_db pspearman RCurl RJSONIO simone VennDiagram]; }; - stringi = derive2 { name="stringi"; version="1.0-1"; sha256="1ld38536sswyywp6pyys3v8vkngbk5cksrhdxp8jyr6bz7qf8j77"; depends=[]; }; - stringr = derive2 { name="stringr"; version="1.0.0"; sha256="0jnz6r9yqyf7dschr2fnn1slg4wn6b4ik5q00j4zrh43bfw7s9pq"; depends=[magrittr stringi]; }; - stripless = derive2 { name="stripless"; version="1.0-1"; sha256="0r5vi6hybw3z7lrsmnjnrjl1gj9b7zf2iqfk2nqwxw4cky17i4cd"; depends=[lattice]; }; - strptimer = derive2 { name="strptimer"; version="0.1.0"; sha256="0fyrapai58rarf6xy9vlg3lmkzgdcpfchrkdlqj69jkiz7ngh4qv"; depends=[dplyr lazyeval magrittr stringi tidyr]; }; + stringi = derive2 { name="stringi"; version="1.1.2"; sha256="13i1p6j8mx31hsw2s4c2phm2llrrdakzixkm6i0axsxprri722z5"; depends=[]; }; + stringr = derive2 { name="stringr"; version="1.2.0"; sha256="16hj2rmv8x03lp6cp2jk0k2plibvbggf444kp05przdvd03v7l31"; depends=[magrittr stringi]; }; + strip = derive2 { name="strip"; version="0.1.1"; sha256="18pz6ix6d661fvg1k1yyyiiwa1gdixynmpxl725ffd9lpykmfqbw"; depends=[rlist]; }; + stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; + striprtf = derive2 { name="striprtf"; version="0.2.2"; sha256="0y709fcdb12iwwhridbvg4xh0j9kgiz75237caax2wxf01fisahz"; depends=[magrittr Rcpp stringr]; }; strucchange = derive2 { name="strucchange"; version="1.5-1"; sha256="0cdgvl6kphm2i59bmnppn1y3kv65ml111bk7yzpcx7vv8wh2w3kl"; depends=[sandwich zoo]; }; structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; }; + structree = derive2 { name="structree"; version="1.1.3"; sha256="1apiqbmmvqmn0nv5cfflfqlyh0108fvy8sg9gg8z6d6bfqkd4rhb"; depends=[mgcv penalized]; }; strum = derive2 { name="strum"; version="0.6.2"; sha256="0f5cb7cfvqhmnv4sjfr58lns4fclmr8iyka595zddy9f6dv5rqp1"; depends=[graph MASS Matrix pedigree Rcpp RcppArmadillo Rgraphviz]; }; - strvalidator = derive2 { name="strvalidator"; version="1.6.0"; sha256="0hy673c1dgxvkplph9g4iihn78diw98lchfhp5inzr2a8w5syyq3"; depends=[data_table ggplot2 gridExtra gtable gWidgets gWidgetsRGtk2 plyr RGtk2 scales]; }; - stsm = derive2 { name="stsm"; version="1.7"; sha256="080xakf7rf53vzv64g338hz87sk4cqfwd6ly4f122sxvn4xypq3n"; depends=[KFKSDS]; }; + strvalidator = derive2 { name="strvalidator"; version="1.8.0"; sha256="0c87256m6zx0m7qkkcdzfrb2x7gbl364499pj5xnfm274ib9l39x"; depends=[data_table ggplot2 gridExtra gtable gWidgets gWidgetsRGtk2 MASS plyr RGtk2 scales]; }; + stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; - stubthat = derive2 { name="stubthat"; version="0.1.0"; sha256="1k6s3sn3swm6pxbv81kw8p2m60q9m1nw64jgimf08qwsrsbfx11h"; depends=[]; }; - stylo = derive2 { name="stylo"; version="0.6.3"; sha256="18fp9m4sn63icyh5bn2f7xjjjk5c0a55i1b76vc1ydxkxipy9nvc"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; + stubthat = derive2 { name="stubthat"; version="1.1.0"; sha256="0x4sy808pq7nqnprqrcpss0v3r8sa1z8bbs759jmybqs1b0ihnqf"; depends=[testthat]; }; + stylo = derive2 { name="stylo"; version="0.6.4"; sha256="1z4db5p83b3fb3cfy4y8a4pi5hybda283988ri7215fk7rifg1jk"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; + subcopem2D = derive2 { name="subcopem2D"; version="1.2"; sha256="1yrjqg3y6i5m6k0zljq1p1pciicmc1vig3qd0wxaicz708rbp3yq"; depends=[]; }; + subdetect = derive2 { name="subdetect"; version="1.1"; sha256="1bcc13avs5w9vmwyf71cnjd2kwmcavmzpwyv8gvsn61n7b4j8wlk"; depends=[]; }; subgroup = derive2 { name="subgroup"; version="1.1"; sha256="1n3qw7vih1rngmp4fwjbs050ngby840frj28i8x7d7aa52ha2syf"; depends=[]; }; - subplex = derive2 { name="subplex"; version="1.1-6"; sha256="0camqd0n468h93jxvvcnclki66glr39rb87nvrkrbiklbqd0s1fp"; depends=[]; }; - subrank = derive2 { name="subrank"; version="0.9.6"; sha256="0a467lihs9njf7sx032cip1r1g7x2rlwk7220c499kl0h3zg9p0j"; depends=[]; }; - subscore = derive2 { name="subscore"; version="1.2"; sha256="0q96n7bplzb8hhaq48bnkq7wvgryf815qc5iql5780jsixwhgn04"; depends=[CTT]; }; - subselect = derive2 { name="subselect"; version="0.12-5"; sha256="00wlkj6p0p2x057zwwk1xdvji25yakgagf98ggixmvfrk1m1saa4"; depends=[]; }; + sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; }; + subniche = derive2 { name="subniche"; version="0.9.2"; sha256="05grwm3g2l8sarybrybn6010769y76m4bp5df69r94p7v10wmd29"; depends=[ade4]; }; + subplex = derive2 { name="subplex"; version="1.2-2"; sha256="10g1hv41w9g0pzj0k071zb3wglk7jl5p99v5maqpkr2v75mfkyry"; depends=[]; }; + subprocess = derive2 { name="subprocess"; version="0.8.0"; sha256="0hvja2gacr84izlsvxcbw1xmm57ycx0n9k5yn62p1v40d135wk9p"; depends=[]; }; + subrank = derive2 { name="subrank"; version="0.9.7"; sha256="0f1m4zk7s49f3kg8gz8g5af8r1x00m4zybdy5fmzvgnx9cx6crkc"; depends=[]; }; + subscore = derive2 { name="subscore"; version="2.0"; sha256="1vscmzw6ama2kc7ic6b2rfbbczcpyhp0m4dd5khg9vkyihww5b5h"; depends=[CTT irtoys]; }; + subselect = derive2 { name="subselect"; version="0.12-6"; sha256="157vkfxy570sl1q9nylpw0vs51h39zjx0m2yxiwdgvzvd6h4s3kr"; depends=[corpcor ISwR MASS]; }; subsemble = derive2 { name="subsemble"; version="0.0.9"; sha256="0vzjmxpdwagqb9p2r4f2xyghmrprx3nk58bd6zfskdgj0ymfgz5z"; depends=[SuperLearner]; }; subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; }; + subspaceMOA = derive2 { name="subspaceMOA"; version="0.5.2"; sha256="051zlpqpxxhhryzv03bb0dz8m7ijhwahagpcwngvh0ccdpi32m7h"; depends=[fields ggplot2 gridExtra magrittr rJava shiny stream streamMOA]; }; subtype = derive2 { name="subtype"; version="1.0"; sha256="1094q46j0njkkqv09slliclp3jf8hkg4147hmisggy433xwd19xh"; depends=[penalized ROCR]; }; sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; }; - sudokuAlt = derive2 { name="sudokuAlt"; version="0.1-6"; sha256="1x3h6si0g4k5xc327daa85k74qh3dqbql7b4ynmasrb5xpcnb92b"; depends=[]; }; - summarytools = derive2 { name="summarytools"; version="0.4"; sha256="1hf20fddi128jv083ljylwqg1ij39hyf6kdnzfxalczl9572wih9"; depends=[htmltools pander pryr rapportools rstudioapi xtable]; }; + sudokuAlt = derive2 { name="sudokuAlt"; version="0.1-9"; sha256="1m4ggvg1nyx3l96zfg826sarfmwxcbjwpipqk5q2qsnhd12wymbd"; depends=[]; }; + summarytools = derive2 { name="summarytools"; version="0.6.5"; sha256="1ddvwn0rfyrlfar1kpwggxnpp9dpswdy8v5alcv3kanp540hnmb1"; depends=[Hmisc htmltools matrixStats pander pryr rapportools rstudioapi xtable]; }; + sunburstR = derive2 { name="sunburstR"; version="0.6.3"; sha256="0lirf37kb0vgsd3hijhx4pcmx1v59nw3ng53k0kyhgq24r3hzvxw"; depends=[d3r htmltools htmlwidgets]; }; supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; }; supcluster = derive2 { name="supcluster"; version="1.0"; sha256="1rkd4bpzzvzbmqaj907pqv53hxcgic0jklbsf5iayf0ra768b5w6"; depends=[gtools mvtnorm]; }; superMDS = derive2 { name="superMDS"; version="1.0.2"; sha256="0jxbwm3izk7bc3bd01ygisn6ihnapg9k5lr6nbkr96d3blpikk04"; depends=[]; }; superbiclust = derive2 { name="superbiclust"; version="1.1"; sha256="1gzjbzbl8y1nzdfhyd6dlrwjq8mwj43a26qav84s1bdzwx6dra48"; depends=[biclust fabia Matrix]; }; superdiag = derive2 { name="superdiag"; version="1.1"; sha256="0pa3mv74riabpm7j4587zww2364fszzlw48ijj1apcgz8y6pyqbw"; depends=[boa coda]; }; + superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; }; + supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; support_BWS = derive2 { name="support.BWS"; version="0.1-3"; sha256="1qlh2zgmr3b6gz3xmncjawgg08c6kgfg3d2m9x78iw95x7p3p5h8"; depends=[]; }; + support_BWS2 = derive2 { name="support.BWS2"; version="0.1-0"; sha256="0r5b7arcab2brcq3maizcy53vbbkzcs5n0zirjj3n1id5cdb36zl"; depends=[]; }; support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; + supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; surface = derive2 { name="surface"; version="0.4-1"; sha256="0z7fh09hjmxfmqzi588gjwqqlpj1a475aixrnvy911lkx3zfk146"; depends=[ape geiger MASS ouch]; }; + surrosurv = derive2 { name="surrosurv"; version="1.1.5"; sha256="1mga3xi41rhnpci7zb224j1jdzf4nli4mbr7jy8nibjyjw4ccdz9"; depends=[copula eha lme4 MASS msm mvmeta optextras optimx parfm SurvCorr survival]; }; surv2sampleComp = derive2 { name="surv2sampleComp"; version="1.0-4"; sha256="1ihz71vzrkd5ksy7421myrgkbww0z5k0ywcb2bfalxx2bd2cs2wf"; depends=[flexsurv plotrix survC1 survival]; }; survAUC = derive2 { name="survAUC"; version="1.0-5"; sha256="0bcj982ib1h0sjql09zbvx3h1m96jy9q37krmk6kfzw25ms6bzzr"; depends=[survival]; }; + survAWKMT2 = derive2 { name="survAWKMT2"; version="1.0.0"; sha256="1cv39rf1ia4nwrri9d9izy6lxndnfwqy2vzrb9rrxga2qplxl79k"; depends=[survival]; }; survAccuracyMeasures = derive2 { name="survAccuracyMeasures"; version="1.2"; sha256="1i41xkvqpxpq9spryh1syp57ymlzw71ygdjqn41rv8jjc9q52x9g"; depends=[Rcpp RcppArmadillo survival]; }; survC1 = derive2 { name="survC1"; version="1.0-2"; sha256="1bidjhq3k5ab7gqj1b2afngip7pp6c9c7q0m6ww7h7i2vg505l7v"; depends=[survival]; }; survIDINRI = derive2 { name="survIDINRI"; version="1.1-1"; sha256="03lsypx189zm28gv764gdq24a18jj3kpdk91ssa501qxj5jv7v29"; depends=[survC1 survival]; }; survJamda = derive2 { name="survJamda"; version="1.1.4"; sha256="14ly1g548ysm8jgsyrhj12zmd6i2lca7rsgby3jbwikyqyk1mx5q"; depends=[ecodist survcomp survival survivalROC survJamda_data]; }; survJamda_data = derive2 { name="survJamda.data"; version="1.0.2"; sha256="0a010v2ar48i5m0jiqjvdyqm93ckfgfmcmym9a02h0rclnizd75r"; depends=[]; }; - survMisc = derive2 { name="survMisc"; version="0.5.0"; sha256="1dkjbxlnad77awb0cj2qkw7n6i55rfc56v5aa3yb3fmixk6qw73v"; depends=[data_table ggplot2 gridExtra km_ci KMsurv knitr survival zoo]; }; + survMisc = derive2 { name="survMisc"; version="0.5.4"; sha256="1m24vnhxk410h117mz056j8xkhp1ivjn5wvpprc0rqnd374z6c84"; depends=[data_table ggplot2 gridExtra km_ci KMsurv knitr survival xtable zoo]; }; survPresmooth = derive2 { name="survPresmooth"; version="1.1-9"; sha256="146ni0xnqd4kfxfxm8nkrgk6v4nrf2hpbb957zh10kmvaa5f9mij"; depends=[]; }; - survRM2 = derive2 { name="survRM2"; version="1.0-1"; sha256="1qcjdx4a9b9dg8jkzak6rq4d4byf9377h43f1m3icdgf79vghlhr"; depends=[survival]; }; - survSNP = derive2 { name="survSNP"; version="0.23.2"; sha256="0vpk5qdvsagv5pnap7ja7smqvibvfp5v7smhikbbwl0h6l83jjw4"; depends=[foreach lattice Rcpp survival xtable]; }; - surveillance = derive2 { name="surveillance"; version="1.11.0"; sha256="0mnnr3cq4ksa9jrqmky96byxag8vv0ak95x2sfm7ppfcymcpb2ya"; depends=[MASS Matrix polyCub Rcpp sp spatstat xtable]; }; + survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; }; + survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; + surveillance = derive2 { name="surveillance"; version="1.13.0"; sha256="1451lcw4hr1np0hmghvkb7q3iwm7jfn8zfi85fr5qdkwsvkivsd1"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; - survey = derive2 { name="survey"; version="3.30-3"; sha256="0vcyph1vpnl4xaqd85ffh1gm0dqhvgr3343q0mlycmyq485x0idy"; depends=[]; }; + survey = derive2 { name="survey"; version="3.31-5"; sha256="1ijlxcslzpy9aqgj1hkr4axhyga6ll4ybzqdw2y07adyz1fwvkpj"; depends=[lattice Matrix survival]; }; + surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; surveydata = derive2 { name="surveydata"; version="0.1-14"; sha256="1zcp3wb7yhsa59cl4bdw7p08vpviypvfa9hggwc60w7ashpky73i"; depends=[plyr stringr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; surveyoutliers = derive2 { name="surveyoutliers"; version="0.1"; sha256="03nqw0zir3x57gg23hgsr2s99pv958kfsygqfwly96rvfdhr5p3v"; depends=[]; }; - surveyplanning = derive2 { name="surveyplanning"; version="1.2"; sha256="0ha0q1d47iwdfxlgjs13ahhghwsmq4xqiiqk8ynkgdq7bfp88a7z"; depends=[data_table]; }; - survival = derive2 { name="survival"; version="2.38-3"; sha256="1hkji557sz4q86pp7xj3h4cdwsnfl1mlj4c6c917mnbijj3bm215"; depends=[]; }; + surveyplanning = derive2 { name="surveyplanning"; version="2.6"; sha256="1nxxyny9bzb8p65vgrlfqq9x3r275d8vl99f6yg621hyzpbyz6gf"; depends=[data_table laeken]; }; + survival = derive2 { name="survival"; version="2.40-1"; sha256="10pf0kq0g66k5rgizrvh29mq3r84acljw2jgrv5yp6z38xw23mci"; depends=[Matrix]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.1.1"; sha256="0c4hr2q50snd5qm2drg4qzfkcz4klxr4jba6xpc8n2i8wn573cvc"; depends=[survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; - survminer = derive2 { name="survminer"; version="0.2.0"; sha256="1id65p2q963an9lfp6pb9bm6h213hpa40pmar4h6x982a3dbjfzl"; depends=[ggplot2 gridExtra scales survival]; }; + survminer = derive2 { name="survminer"; version="0.2.4"; sha256="083hja5zid3ndfpx77vxm7vyqnjrq8c18vil8mch721fafhajrcd"; depends=[ggplot2 ggpubr gridExtra magrittr maxstat scales survival tidyr]; }; survrec = derive2 { name="survrec"; version="1.2-2"; sha256="0b77ncr1wg2xqqg1bv1bvb48kmd9h3ja2dysiggvprzjrj7hdlmx"; depends=[boot]; }; survsim = derive2 { name="survsim"; version="1.1.4"; sha256="16njbqlzmk34zrh485kc0a52yacdyj9z4z4a9zcq1z5psm87c58m"; depends=[eha statmod]; }; svDialogs = derive2 { name="svDialogs"; version="0.9-57"; sha256="1qwnimzqz7jam3jnhpr90bgwp9zlsswy2jl17brdpsrpiwcg6jlr"; depends=[svGUI]; }; @@ -7586,493 +9502,636 @@ in with self; { svd = derive2 { name="svd"; version="0.4"; sha256="06bw4nypj9p57py2vw26yhzn3gw7clvby1mxbg2s2wj3jyay47p5"; depends=[]; }; svdvis = derive2 { name="svdvis"; version="0.1"; sha256="1z3z86izl2gpxllpx56vn6kkdg9cjjikfd90hdjnfi4bmmpx50dn"; depends=[GGally ggplot2 gridExtra RColorBrewer reshape2 scales]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; - svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.2"; sha256="0hj4z6znp02p7gwadrqh9sagn8ydcwl52cckhinlycawjinzqcgs"; depends=[htmlwidgets]; }; - svgViewR = derive2 { name="svgViewR"; version="1.0.1"; sha256="1ggw5w5xjqp33z6nzszimcab3vkv4rliiilhcqbhppqlnhjb8nab"; depends=[]; }; - svglite = derive2 { name="svglite"; version="1.1.0"; sha256="11ryicjglfi6jvkk4jgg5kra42qbs5z2zid7jjhlslpjcljfwc70"; depends=[BH gdtools Rcpp]; }; - svmadmm = derive2 { name="svmadmm"; version="0.2"; sha256="0g4q96gzd4h6ykc6ny1v06zabyyw6vm2slsfbsnnkxk4gah46zyj"; depends=[kernlab]; }; - svmpath = derive2 { name="svmpath"; version="0.953"; sha256="0hqga4cwy1az8cckh3nkknbq1ag67f4m5xdg271f2jxvnmhdv6wv"; depends=[]; }; + svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.3"; sha256="09gfa2943bvmjpnhnc2nr85wddkv662k30pxsqvvvq1va64rzpkc"; depends=[htmlwidgets]; }; + svgViewR = derive2 { name="svgViewR"; version="1.2"; sha256="0h3smaplnkkvbl9c6lwl67jbk34m6sygkh2d82xz66hbyw2i6q7k"; depends=[]; }; + svglite = derive2 { name="svglite"; version="1.2.0"; sha256="1s1gvmlmmna5y4jsn9h6438pg5b86fl4nwfvkgm6n4h6ljfgqyx3"; depends=[BH gdtools Rcpp]; }; + svmadmm = derive2 { name="svmadmm"; version="0.3"; sha256="15ccda1r9cc6v30j37i052rdwxgw0wg37hwyn2vp8c7bkr0ybgkm"; depends=[kernlab]; }; + svmpath = derive2 { name="svmpath"; version="0.955"; sha256="02j5xs4gg8k16imnwk6aram168cv1dqdrky3bszyc98l7xd0nlrj"; depends=[]; }; svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; + swCRTdesign = derive2 { name="swCRTdesign"; version="2.1"; sha256="0c5pya5jgpj5ncrvpzahhrbhl7b39w19f3vl06r8q0nandbn7rwq"; depends=[]; }; swamp = derive2 { name="swamp"; version="1.2.3"; sha256="1xpnq5yrmmsx3d48x411p7nx6zmwmfc9hz6m3v9avvpjkbc3glkg"; depends=[amap gplots impute MASS]; }; - sweidnumbr = derive2 { name="sweidnumbr"; version="1.1.0"; sha256="0ym7rnfd8wcab1vwpm64yh6day3ypzrlpvdrw5agc1nckhl9xp1p"; depends=[lubridate stringr]; }; - swirl = derive2 { name="swirl"; version="2.2.21"; sha256="0lpin7frm1a6y9lz0nyykhvydr1qbx85iqy24sm52r1vxycv2r8h"; depends=[digest httr RCurl stringr testthat yaml]; }; - swirlify = derive2 { name="swirlify"; version="0.4.1"; sha256="15xd18jgrqsq9w0qa64qxfcinrsy87mjbwc0s22x06yzhpcvcmdk"; depends=[rmarkdown stringr swirl whisker yaml]; }; + sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; }; + swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; }; + swirl = derive2 { name="swirl"; version="2.4.2"; sha256="1dmjpjyk1a76vyya2x47sakj7xspma0i20zhryraf52mavb5qnw9"; depends=[digest httr RCurl stringr testthat yaml]; }; + swirlify = derive2 { name="swirlify"; version="0.5.0"; sha256="1j5xrv9nbfxmwxr77qa545fcm0vg76zwv1l5msgykq2g6cc9vc4z"; depends=[base64enc rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; - switchr = derive2 { name="switchr"; version="0.9.19"; sha256="1x8vf6nmy1rsy25ijl2ycxcpwzwkmhffvlmmg5p30m7y4zmcm200"; depends=[]; }; + switchr = derive2 { name="switchr"; version="0.11.2"; sha256="0kwkadw1hfkjvlpgr8lfx9qknlml3alk8ka2yhbga019y7ifbm7y"; depends=[RCurl RJSONIO]; }; switchrGist = derive2 { name="switchrGist"; version="0.2.1"; sha256="0n8fzzsxm0m4yic133q07vki803zywhijadymrgyq7qlx3d1m97d"; depends=[gistr httpuv RJSONIO switchr]; }; - sybil = derive2 { name="sybil"; version="1.3.2"; sha256="1wpn5dmvhr6va3bh0pgrlv9sg8fmiy3h39jrm1391h5pkc65g0f1"; depends=[lattice Matrix]; }; - sybilDynFBA = derive2 { name="sybilDynFBA"; version="0.0.2"; sha256="1sqk6dwwfrwvgkwk6mra0i1dszhhvcwm58ax6m89sxk8n0nbmr4b"; depends=[sybil]; }; + sybil = derive2 { name="sybil"; version="2.0.0"; sha256="0nb5k5mpqpk1i83s0a8k4npi72imsywwm1jn1hh2vr5bx3sjwflw"; depends=[lattice Matrix]; }; + sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.1"; sha256="1zyhvlzkcwnq3sh6gvi0v1crq94mr16bc5jnh0g9c8rbdl4v8r4x"; depends=[sybil]; }; sybilEFBA = derive2 { name="sybilEFBA"; version="1.0.2"; sha256="07c32xwql7sr217j8ixqd2pj43hhyr99vjdh7c106lsmqd1pifa4"; depends=[Matrix sybil]; }; - sybilSBML = derive2 { name="sybilSBML"; version="2.0.10"; sha256="0zw41lcq3b1qbs4ik7v3jjjqgm3hhi35mmxvq9vm78rrz1cz59b5"; depends=[Matrix sybil]; }; + sybilSBML = derive2 { name="sybilSBML"; version="3.0.1"; sha256="1dzx1cdvi4fvdqf5hliwwk3gn5ig2wzzxv2gr92760p9c84hmmrj"; depends=[Matrix sybil]; }; sybilccFBA = derive2 { name="sybilccFBA"; version="2.0.0"; sha256="0x0is1a56jyahaba6dk9inj5v248m8n46f70ynqyqp1xpiax1fkr"; depends=[Matrix sybil]; }; - sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="1.0.1"; sha256="0ffmgnr239xz8864vmrqlhwwc97fqzzib6kwrsm7bszdnw1kkv3r"; depends=[MASS Matrix sybil]; }; + sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.0"; sha256="0p3w7ipyrqrh7nf52h8qmr4fikyinm8an7npmcb7kwjd59rcy554"; depends=[MASS Matrix sybil]; }; + syllable = derive2 { name="syllable"; version="0.1.3"; sha256="1ymnczwx58h720hsm0s9zq3ddwg6gn6bgg0m8zw24i0nlivx0yjg"; depends=[data_table stringi textclean textshape]; }; symbolicDA = derive2 { name="symbolicDA"; version="0.4-2"; sha256="1vn7r7b7yyn2kp8j3ghw50z49yzvwhm0izc6wgc7a99300xrr77s"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; }; symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; - synbreed = derive2 { name="synbreed"; version="0.11-29"; sha256="05f690d3gyr6zmp3s8ld5vy4a0ng8ikxpr28xi9l7m62j9c4pcic"; depends=[abind BGLR doBy igraph lattice LDheatmap MASS regress]; }; + synbreed = derive2 { name="synbreed"; version="0.11-41"; sha256="077ixxfipc7msrmg0p4v5nhqwn276bj2766h6y5m9gj208xz5d91"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS regress]; }; synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; }; synchronicity = derive2 { name="synchronicity"; version="1.1.9.1"; sha256="0d9skpwmsnkn4xb3f2kgyyv8bhdi0r9p1kj3cvi0s92fjjnpi00c"; depends=[BH bigmemory_sri Rcpp]; }; synchrony = derive2 { name="synchrony"; version="0.2.3"; sha256="0fi9a3j8dfslf1nqx8d53fi635y3aq8isxw0dbjbpgk7rc71nzby"; depends=[]; }; synlik = derive2 { name="synlik"; version="0.1.1"; sha256="0g4n78amydihsq4jg2i9barjm9g40zczasb31fj10yn6wir1dhv7"; depends=[Matrix Rcpp RcppArmadillo]; }; - synthpop = derive2 { name="synthpop"; version="1.2-1"; sha256="0siwgg16zky0dlw0wvl3n20y4pr94q3was8gw4llrla7jkh0g4pj"; depends=[foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; + synthACS = derive2 { name="synthACS"; version="1.0.1"; sha256="0jbhiadgc8f6h7ga685cm5i8y59lf76r8sgd629xfjj4jxn8ckdm"; depends=[acs data_table Rcpp]; }; + synthpop = derive2 { name="synthpop"; version="1.3-1"; sha256="0vp79jxp4hr9wrc4dlh9ckkcpwiffdixr9jh1w6w1wkii3bjcani"; depends=[foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; + sys = derive2 { name="sys"; version="1.1"; sha256="1wik7rbnd0a1mq52ziknil6rjyrsmwgyhkzr9pb5c7vxqydp0jnj"; depends=[]; }; sysfonts = derive2 { name="sysfonts"; version="0.5"; sha256="1vppj3jnag88351f8xfk9ds8gbbij3m55iq5rxbnrzy89c04zpzp"; depends=[]; }; + sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; systemfit = derive2 { name="systemfit"; version="1.1-18"; sha256="0sy0v0iz4qzrmazp5j63d62xvlyi9mw5ryd4msd1xmppdl7r453p"; depends=[car lmtest MASS Matrix sandwich]; }; - systemicrisk = derive2 { name="systemicrisk"; version="0.3"; sha256="07i3pjghx2v8brx0k6xy5bk1d263wwyh5mbg7bzs4vwn4dh5k08f"; depends=[lpSolve Rcpp]; }; - syuzhet = derive2 { name="syuzhet"; version="0.2.0"; sha256="1l83wjiv1xsxw4wrcgcj3ryisi7zn4sbdl0sail0rhw0g9y9cz76"; depends=[NLP openNLP]; }; + systemicrisk = derive2 { name="systemicrisk"; version="0.4"; sha256="1qpimrfr75l6phr425m7av02l57yyn1n2if7h26cndf9ynmv6vz1"; depends=[lpSolve Rcpp]; }; + syuzhet = derive2 { name="syuzhet"; version="1.0.0"; sha256="15qkjnnyf8fsiknr5jb550v34xs55x6psskbrkvr1vfwvbivkzcf"; depends=[dtt NLP openNLP zoo]; }; taRifx = derive2 { name="taRifx"; version="1.0.6"; sha256="10kp06hkdx1qrzh2zs9mkrgcnn6d31cldjczmk5h9n98r34hmirx"; depends=[plyr reshape2]; }; - taRifx_geo = derive2 { name="taRifx.geo"; version="1.0.6"; sha256="0w7nwp3kvidqhwaxaiq267h99akkrj6xgkviwj0w01511m2lzghs"; depends=[RCurl rgdal rgeos RJSONIO sp taRifx]; }; - tab = derive2 { name="tab"; version="3.1.1"; sha256="05wypi4v9r2qlgwafd9f58vnxn2c4fnz18l8xpb24nhdgm35adqy"; depends=[gee survey survival]; }; + tab = derive2 { name="tab"; version="3.1.2"; sha256="1vc5swfy9p3bsv5bqqgk4w81apzk6d0m1xz0cbhii7rpn7x6zh1h"; depends=[gee survey survival xtable]; }; taber = derive2 { name="taber"; version="0.1.0"; sha256="07a18kn65b4cxxf1z568n7adp6y3qx96nrff3a3714x241sd5p6i"; depends=[dplyr magrittr]; }; - tablaxlsx = derive2 { name="tablaxlsx"; version="1.0.8"; sha256="06l4rw6snhpkx6i74hh7i34mp9p1y7dwkpsmkq4083cm94hz308d"; depends=[openxlsx]; }; - table1xls = derive2 { name="table1xls"; version="0.3.1"; sha256="0zd93wrdj4q0ph375qlgdhpqm3n8s941vks5h07ks9gc8id1bnx5"; depends=[XLConnect]; }; + tablaxlsx = derive2 { name="tablaxlsx"; version="1.2.0"; sha256="1wrjasa4bdcv9pcfardm3v3k5f2lm7hrbm7xpyz0gy2ibm3b15pk"; depends=[openxlsx]; }; + table1xls = derive2 { name="table1xls"; version="0.3.2"; sha256="0b8j4gl4w3jz8hg89ja90sjvigjkqnrh4hpmky5q4a9swgwhmgf6"; depends=[XLConnect]; }; + tableHTML = derive2 { name="tableHTML"; version="0.2.12"; sha256="02a0j75d6praxp44m9idv116grzw6k9lhhgdjcxl2r9ci9cak1bn"; depends=[htmltools magrittr shiny]; }; + tableMatrix = derive2 { name="tableMatrix"; version="0.8"; sha256="00l03blrrkwdrihqnwz8afx6s3d7a19laj44584546yd3prqx5dy"; depends=[data_table]; }; tableone = derive2 { name="tableone"; version="0.7.3"; sha256="0ffir00gzrx4fxci018vra7m8hfiqmvlib52wlxikksna2ha51qv"; depends=[e1071 gmodels MASS survey zoo]; }; tableplot = derive2 { name="tableplot"; version="0.3-5"; sha256="1jkkl2jw7lwm5zkx2yaiwnq1s3li81vidjkyl393g1aqm9jf129l"; depends=[]; }; - tables = derive2 { name="tables"; version="0.7.79"; sha256="05f23y5ff961ksx4fnmwpf6zvc9573if8s2cmz9bwki66h2g9xb7"; depends=[Hmisc]; }; - tabplot = derive2 { name="tabplot"; version="1.1"; sha256="0vyc6b6h540sqwhrza2ijg7ghw2x8rla827b8qy2sh0ckm0ybjrx"; depends=[ffbase]; }; + tables = derive2 { name="tables"; version="0.8"; sha256="0a8ks6gs4n25khs51dr55z1665zbsyzv2849h7h9xwz8izv8l6za"; depends=[Hmisc]; }; + tabplot = derive2 { name="tabplot"; version="1.3-1"; sha256="0yz3npn36q93gr0k9a4x5swap5fwxfc22b131kif3dfxkgklna06"; depends=[bit ff ffbase]; }; tabplotd3 = derive2 { name="tabplotd3"; version="0.3.3"; sha256="0mbj45vb17wlnndpkhvq7xaawsb814x7zxa4rqbfgidvbm1p3abv"; depends=[brew httpuv RJSONIO Rook tabplot]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1"; sha256="0bri03jksm314xy537dldbdvgyq6sywfmpmj2g2acdcli31kkpq0"; depends=[]; }; - tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.9.0"; sha256="0p0bnmycqkbg2zq0hlanap09pn7jl90l4pmmkfs2i7l58pql3cr9"; depends=[broom car dplyr ggplot2 haven lazyeval pixiedust pwr ryouready sjmisc vcd]; }; + tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.10.0"; sha256="1n3fq68gk20bivkybdls3c6vdwlyxqg8rfsksskv0i4aj1vdvbdw"; depends=[broom car cowplot dplyr ggplot2 haven lazyeval nortest pixiedust pwr ryouready sjmisc vcd]; }; tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; }; + tailDepFun = derive2 { name="tailDepFun"; version="1.0.0"; sha256="1z2jrzly1adiwi8y0pndyfggpr0li6sjv9rkrc5mi47s0qjvr5qj"; depends=[copula cubature mvtnorm SpatialExtremes]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; - tau = derive2 { name="tau"; version="0.0-18"; sha256="04rj3jrcz4h60dqm1xmnmpr52csz1s7rf2wv6ivybgyvbq0w2ijf"; depends=[]; }; - tawny = derive2 { name="tawny"; version="2.1.2"; sha256="0ihg3qlng8swak1dfpbnlx5xc45d1i9rgqawmqa97v5m91smfa71"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; + tau = derive2 { name="tau"; version="0.0-19"; sha256="0z7ylw590r7jrw4rlmhahxiwqrnw3124fssnzqs36qa7pa3zqhq2"; depends=[]; }; + tawny = derive2 { name="tawny"; version="2.1.6"; sha256="0s6p0nnz1rpcnn2yfj1vvl54g57d8rv5s4y09azwz1z5ls7vnnlv"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.3"; sha256="1v0k6nn45rdczjn5ymsp2fqq0ijnlniyf3bc08ibd8yd1jcdyjnj"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; - taxize = derive2 { name="taxize"; version="0.7.4"; sha256="17gpd471awjr798q4973kj4xgrdqlgjdxp7fzpr9sf969vaz1jq8"; depends=[ape bold data_table foreach httr jsonlite plyr reshape2 rredlist stringr xml2]; }; + taxize = derive2 { name="taxize"; version="0.8.4"; sha256="03zfrkcpkbzqkm3w9m9g34nhrrp36l630l8rhpnsnkqnfxybb3yv"; depends=[ape bold data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble worrms xml2]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; - tcR = derive2 { name="tcR"; version="2.2.1.7"; sha256="1m37ndk73y267q6byzpf8kfx8vsd5j2xdspcgkz6743fkaj1myam"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; + tcR = derive2 { name="tcR"; version="2.2.1.11"; sha256="1wyxjwyba08m80g2c40sdg3d5brs3qmq8azb6vzwh2wmgqlb5400"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; + tcgsaseq = derive2 { name="tcgsaseq"; version="1.4.1"; sha256="09hswqmj7svyiqdbbg7shimhkgxmz0m8w6bknx9qd987hik9asx8"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; }; tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; }; tclust = derive2 { name="tclust"; version="1.2-3"; sha256="0a1b7yp4l9wf6ic5czizyl2cnxrc1virj0icr8i6m1vv23jd8jfp"; depends=[cluster mclust mvtnorm sn]; }; + tcpl = derive2 { name="tcpl"; version="1.2.2"; sha256="1f32qq5816qkyx3n16vgf13g2piv2pqn2nki3c91vg51bwfap7z1"; depends=[data_table DBI numDeriv RColorBrewer RMySQL RSQLite]; }; + tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; tdr = derive2 { name="tdr"; version="0.11"; sha256="1ga1lczqj5pka2yz7igxfm83xmkx7lla8pz6ryij0ybn284agszs"; depends=[ggplot2 lattice RColorBrewer]; }; tdthap = derive2 { name="tdthap"; version="1.1-7"; sha256="0lqcw4bzjd995pwn2yrmzay82gnkxnmxxsqplpbn5gg8p6sf5qqk"; depends=[]; }; - teigen = derive2 { name="teigen"; version="2.1.0"; sha256="1b9vkz812jsvzxs4751q8zmkvbc1bh4zbi4pd0550b181vxnn8wa"; depends=[]; }; + tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; + teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; + teigen = derive2 { name="teigen"; version="2.2.0"; sha256="0ljm8dz4hndnc37psr7mnl1gbxs1kghygz3cyqzld1xpjwsjc2cz"; depends=[]; }; + telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; + tempR = derive2 { name="tempR"; version="0.9.9.9"; sha256="1g2rj26a9zm4qbq2k325h112bb6w8qgifhzd1zhc2vql0bk6i18k"; depends=[]; }; tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; - tempdisagg = derive2 { name="tempdisagg"; version="0.24.0"; sha256="02ld14mppyyqvgz537sypr3mqc758cchfcmpj46b7wswwa2y7fyz"; depends=[]; }; + tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; }; + templates = derive2 { name="templates"; version="0.1.0"; sha256="133gzc7hz0dh1myv7b0rmcz14x0n1gy7pj948gci70sikvdvbvp5"; depends=[dat magrittr modules stringr]; }; tensor = derive2 { name="tensor"; version="1.5"; sha256="19mfsgr6vz4lgwidm80i4yw0y1dr3n8i6qz7g4n2xa0k74zc5pp1"; depends=[]; }; tensorA = derive2 { name="tensorA"; version="0.36"; sha256="1xpczn94a6vfkfibfvr71a7wccksg16pc22h0inpafna4qpygcwp"; depends=[]; }; + tensorBF = derive2 { name="tensorBF"; version="1.0.1"; sha256="1rnsff1ypwhn5z0xsxyk2z7jl6igscma1a0w613i81qf37iy81ba"; depends=[tensor]; }; + tensorBSS = derive2 { name="tensorBSS"; version="0.2"; sha256="0bwqv5cxr5lf2p6xa2p03kwhanrzskz8k3xif1myfjhdw1vzyqib"; depends=[JADE Rcpp RcppArmadillo tensor tsBSS]; }; tensr = derive2 { name="tensr"; version="1.0.0"; sha256="05gclhljflkz98hgiq5bgbqjz8icxbdq6b84bn2995cx7v0x85ds"; depends=[]; }; - tergm = derive2 { name="tergm"; version="3.3.1"; sha256="1k10pmm3b62naw4mcy7318yzjq1j1s5qqjsmz90vnh0dajfhvhbw"; depends=[coda ergm network networkDynamic nlme robustbase statnet_common]; }; + tergm = derive2 { name="tergm"; version="3.4.0"; sha256="19658k5570z8yxpklbbl87a7pd8i4yygi0ky8lgzb8qymds90v4s"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; termstrc = derive2 { name="termstrc"; version="1.3.7"; sha256="12bycwhjrhkadafcckc30jr0md0ssj21n4v75yjhy21yvqjx1d7a"; depends=[lmtest Rcpp rgl sandwich urca zoo]; }; ternvis = derive2 { name="ternvis"; version="1.1"; sha256="16q1a1ns7q0d46js2m1hr6zm8msg3ncgp8w7yrwch11xq0759sb4"; depends=[dichromat mapdata maps maptools quadprog]; }; + tesseract = derive2 { name="tesseract"; version="1.3"; sha256="17rk3m4rd2qk8vhnkrnn6sffdlvg1amvawdkfp0fi2ip3p0qcrs4"; depends=[curl digest Rcpp]; }; + testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; - testit = derive2 { name="testit"; version="0.5"; sha256="1v39mz4qrcml90p5d1z9x0cs2llj2pgfpymdwndh9r94ndlzs5hl"; depends=[]; }; - testthat = derive2 { name="testthat"; version="0.11.0"; sha256="1fks5d4sbh4ya1va1p2815kwrklflm8ifplp6kjx1d1y09hrx9i4"; depends=[crayon digest praise]; }; - testthatsomemore = derive2 { name="testthatsomemore"; version="0.1"; sha256="0j9sszm4l0mn7nqz47li6fq5ycb3yawc2yrad9ngb75cvp47ikkk"; depends=[testthat]; }; - texmex = derive2 { name="texmex"; version="2.1"; sha256="17x4xw2h4g9a10zk4mvi3jz3gf4rf81b29hg2g3gq6a6nrxsj8sy"; depends=[mvtnorm]; }; - texmexseq = derive2 { name="texmexseq"; version="0.1"; sha256="18lpihiwpjkjkc1n7ka6rzasrwv8npn4939s1gl8g1jb27vnhzb5"; depends=[]; }; - texreg = derive2 { name="texreg"; version="1.36.4"; sha256="11iivv5pslwqd0nbi533jyigwd16yx2mx1gl22ip8ghqvllfzxmk"; depends=[]; }; - text2vec = derive2 { name="text2vec"; version="0.2.0"; sha256="0s73phk4dzm1f9wcj5b1iha1g6rv3hvd6iwy97kgwxqd308cas48"; depends=[digest iterators magrittr Matrix Rcpp RcppParallel readr stringr]; }; - textcat = derive2 { name="textcat"; version="1.0-4"; sha256="0mxxs2zq6zijh954r7zxvh2l416k49jghzbdzwcm55mf133lb07z"; depends=[slam tau]; }; + testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; + testit = derive2 { name="testit"; version="0.6"; sha256="05ll0vg30gbb2x7pal6a5ms94nmxj86fzx4ahggrr96cpxyhy8lv"; depends=[]; }; + testthat = derive2 { name="testthat"; version="1.0.2"; sha256="0pj1r01x4ny4capr83dfa19hi5i2sjjxky99schzip8zrq5dzxqf"; depends=[crayon digest magrittr praise R6]; }; + texmex = derive2 { name="texmex"; version="2.3"; sha256="0hh633hlzmjrlind51kjs7s1zpx8bwcwfa93yl4swfvn501j1hy9"; depends=[ggplot2 mvtnorm]; }; + texmexseq = derive2 { name="texmexseq"; version="0.3"; sha256="08zjsb541xqqs3lj7avx5147g2d0bh3v036x615srjx2pbxzhsvg"; depends=[dplyr ggplot2 testthat]; }; + texreg = derive2 { name="texreg"; version="1.36.18"; sha256="1lzjs651b4mmjjgzkbdzdl3nk3g3kd5bzzj7ssfqvbkk7kp6g3rq"; depends=[]; }; + text2vec = derive2 { name="text2vec"; version="0.4.0"; sha256="1ipggg63s16gb72fr7kpmc4z8v6ylp4kw7kb9bk6pccg9iz54i5a"; depends=[data_table digest foreach irlba magrittr Matrix R6 Rcpp RcppParallel]; }; + textTinyR = derive2 { name="textTinyR"; version="1.0.3"; sha256="09wiql4fiw5zzilvfa3y6cqxpgifilf52kvvc7svmjc2abh3afz3"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + textcat = derive2 { name="textcat"; version="1.0-5"; sha256="039bzyz4jvh1hl2a2pfp328kr2mpb1a07j79yqf5cbqk3d5a197b"; depends=[slam tau]; }; + textclean = derive2 { name="textclean"; version="0.3.1"; sha256="1k8wjzzh6nplrnyxq4cd7q4q0sn2fa5p5r2kaq2rd4j9sqrrypp0"; depends=[english qdapRegex stringi textshape]; }; + textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; textir = derive2 { name="textir"; version="2.0-4"; sha256="1ky22xar980afyydddahppad9m263mxnrdqpj1fcbmdhg8flwjgz"; depends=[distrom gamlr Matrix]; }; - textmineR = derive2 { name="textmineR"; version="1.6.0"; sha256="1cgpy0hk73jigag4x48ygkvks8k2x3m1amf34li2ffbx2g6066jb"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RWeka tm]; }; + textmineR = derive2 { name="textmineR"; version="2.0.4"; sha256="127ngmzvzsb8pbwv6f4k76jv3aqrmpwpbx29cic39m05zxjxxm7k"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; }; + textmining = derive2 { name="textmining"; version="0.0.1"; sha256="16wiykhrjs4djwa7q2wm4g8b3mrhh6hq9d9876w1j7c2s6zx69gd"; depends=[caret dplyr koRpus mallet networkD3 NLP rJava slam SnowballC stylo tm topicmodels wordcloud]; }; textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; + textreadr = derive2 { name="textreadr"; version="0.3.1"; sha256="0l8aiad16m7lgak61lwi7j03mkrzkjvp1fwi8b4xmgfn3mg797zq"; depends=[curl pdftools readxl textshape XML]; }; textreg = derive2 { name="textreg"; version="0.1.3"; sha256="0wp1yybhcybb77aykk9frrylk4kjn0jc98q488195qzx7m5n7ccw"; depends=[NLP Rcpp tm]; }; - textreuse = derive2 { name="textreuse"; version="0.1.2"; sha256="174gh9f4bfgpf8vnwcciq2y70rnzwln5yygzif28x5h960yckv5x"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; + textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; + textshape = derive2 { name="textshape"; version="1.0.2"; sha256="0p9n003z98aqk272wcj02z0c5dzaw01iyfbd0fjyccgkidyaz49h"; depends=[data_table slam stringi]; }; + textutils = derive2 { name="textutils"; version="0.1-6"; sha256="0xvsd6pfg4kv40l14xcvmirqiq8rmky4s8v8diagzri3a7i45nqn"; depends=[]; }; tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; }; tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; tframe = derive2 { name="tframe"; version="2015.12-1"; sha256="0k0favda3z6zdg7ykc2nnl28gxz7sfzbyr5pcifiyi984pa2zgfx"; depends=[]; }; - tframePlus = derive2 { name="tframePlus"; version="2015.1-2"; sha256="043ay79x520lbh4jm2nb3331pwd7dvwfw20k1kc9cxbplxiy8pnb"; depends=[tframe timeSeries]; }; - tgcd = derive2 { name="tgcd"; version="1.8"; sha256="0bq2swfz29dl1d745pprx9c3b8nplpb7d64v24nzxrj7yvjfwj90"; depends=[]; }; + tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; + tgcd = derive2 { name="tgcd"; version="2.0"; sha256="1553f464jpmngdj8fmbjn9cpmrcp4ysgsfx4w7q4pm4csslsqvlr"; depends=[]; }; tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; }; tglm = derive2 { name="tglm"; version="1.0"; sha256="1gv33jq3bzd5wlrqjvcfb1ax258q9asawkdi64rbj18qp7fg2dbx"; depends=[BayesLogit coda mvtnorm truncnorm]; }; tgp = derive2 { name="tgp"; version="2.4-14"; sha256="1l3kssjkh5sbrh75qdpmynjfnidgz8vmzq1jml1qm1yfwval8ak1"; depends=[maptree]; }; tgram = derive2 { name="tgram"; version="0.2-2"; sha256="091g6j5ry1gmjff1kprk5vi2lirl8zbynqxkkywaqpifz302p39q"; depends=[zoo]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; - thgenetics = derive2 { name="thgenetics"; version="0.3-4"; sha256="1316nx0s52y12j9499mvi050p3qvp6b8i01v82na01vidl54b9c2"; depends=[]; }; + thgenetics = derive2 { name="thgenetics"; version="0.3-4.1"; sha256="05g5rwdpnd1b4h1lay2l1s0ns2q6a7sav8d4zrxaqgzhaafnpxyv"; depends=[]; }; + thief = derive2 { name="thief"; version="0.2"; sha256="14xl5l7iw0nwbz5zzd00c8ihfclvhfcazvysr8rapsq1j2r5dfck"; depends=[forecast forecTheta ggplot2 hts]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; - threejs = derive2 { name="threejs"; version="0.2.1"; sha256="01zfv5lm11i2nkb876f3fg8vsff2wk271jqs6xw1njjdhbnnihs1"; depends=[base64enc htmlwidgets]; }; + threejs = derive2 { name="threejs"; version="0.2.2"; sha256="1i8ca99ys0m0njf5f9yhc5rvs9x43mwl98dh74gggq7vj2a99zj1"; depends=[base64enc htmlwidgets jsonlite Matrix]; }; threewords = derive2 { name="threewords"; version="0.1.0"; sha256="083y5i4qyl1wj017wy5ywl2yx9wvrpjl9g9k9clvnrbwzbycx2cg"; depends=[httr]; }; threg = derive2 { name="threg"; version="1.0.3"; sha256="1ja0w4hhdkw3b1cipbpw8ym27k5lh2m7gibd74mj6gij7rpixrnb"; depends=[Formula survival]; }; - thregI = derive2 { name="thregI"; version="1.0.1"; sha256="1ng13f08zj0sglh99ixr0afzwj1fag8b88046bzdzq4vf3vq5v36"; depends=[Formula survival]; }; + thregI = derive2 { name="thregI"; version="1.0.2"; sha256="1r2p4mcj1myay5qgwvdprh3qvb2gzg2lbcci24hfx5c8dmsc39fd"; depends=[Formula survival]; }; thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; - tibble = derive2 { name="tibble"; version="1.0"; sha256="105iammxmhm2mlv3fq0gvrglz6gqyvm4iiiilsvq54fw0z68a4n6"; depends=[assertthat lazyeval Rcpp]; }; - tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.0-71"; sha256="0d8gy126hzzardcwr9ydagdb0dy9bdw30l8s2wwi7zaxx2lpii6q"; depends=[RCurl rjson]; }; + tibble = derive2 { name="tibble"; version="1.2"; sha256="011i352ylq9b4xfcj7h10h7qsqd9qkc1rzc0pr1gf8qjb788p2pd"; depends=[assertthat lazyeval Rcpp]; }; + tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; + tictactoe = derive2 { name="tictactoe"; version="0.2.0"; sha256="1n8lbw3g9x1i6rjj3gsyzwnb0ailw9vb6vgr0s0h21c0g1z66a74"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; tidyjson = derive2 { name="tidyjson"; version="0.2.1"; sha256="178lc4ii4vjzvrkxfdf5cd9ryxva9h2vv4wl6xgxgaixkab9yv9w"; depends=[assertthat dplyr jsonlite]; }; - tidyr = derive2 { name="tidyr"; version="0.4.1"; sha256="0xp6lyr2l4ix2mrilx4qmca7wm5qmbhvi24m4nf7qsgwp54gnv2h"; depends=[dplyr lazyeval magrittr Rcpp stringi]; }; + tidyquant = derive2 { name="tidyquant"; version="0.3.0"; sha256="1fn78ibi9c0a14kr54yca489xjac1j58w8g77il61czqq8bn5hdv"; depends=[curl devtools dplyr ggplot2 lubridate magrittr purrr quantmod readr rvest scales stringr tibble tidyr tidyverse timeSeries tseries TTR xml2 xts zoo]; }; + tidyr = derive2 { name="tidyr"; version="0.6.1"; sha256="11hs3gqpbaw3w281as4m7j9n594ix5axfpwbyjsd0l62pwnzj217"; depends=[dplyr lazyeval magrittr Rcpp stringi tibble]; }; + tidytext = derive2 { name="tidytext"; version="0.1.2"; sha256="1pmr7bajlcv2s42qmiz1c6723scqmlfky1ajb7hrp8h3bf7sv0cm"; depends=[broom dplyr hunspell janeaustenr Matrix purrr stringr tokenizers]; }; + tidyverse = derive2 { name="tidyverse"; version="1.1.1"; sha256="1ahxs7xzik27xdbzc1ccrkq5knzrn8xf82x3dhh94xi5c8p3ysqx"; depends=[broom dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl rvest stringr tibble tidyr xml2]; }; + tidyxl = derive2 { name="tidyxl"; version="0.2.1"; sha256="10b6bl2yr11mzajkzj6xzfyfb0mgglzxm8hpsqxkmd9dp4x96035"; depends=[Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; }; tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; - tigerstats = derive2 { name="tigerstats"; version="0.2.7"; sha256="1jgglgdv1xjyyc376ggydvna26lb4f7l7lv82xn56fa8asdssd91"; depends=[abd ggplot2 lattice manipulate MASS mosaic mosaicData]; }; + tigerhitteR = derive2 { name="tigerhitteR"; version="1.1.0"; sha256="0inyi12lf8bn7nbklf2rjixk6wrgrjcp8njv7knai4dgvv7v0rfa"; depends=[Hmisc magrittr openxlsx zoo]; }; + tigerstats = derive2 { name="tigerstats"; version="0.3"; sha256="12wrghipgypkhwwkmaxb6n0qx9fgxk82dc6wlh56rblsvciv2hj0"; depends=[abd ggplot2 lattice manipulate MASS mosaic mosaicData]; }; + tigger = derive2 { name="tigger"; version="0.2.8"; sha256="1qck72fnsivmc8gq8n5c18b6nzxp2kn3vs9kfziqr04hpwhz4266"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.0"; sha256="0psyzk6d33qkql8v6hzkp8mfwb678r95vfycz2gh6fky7m5k3yyz"; depends=[]; }; - tigris = derive2 { name="tigris"; version="0.2.2"; sha256="0pc9fg6p7qsdmq1pjp0mqaxmdqxcskp3hcn6sgabpa40q37gb77z"; depends=[httr magrittr maptools rappdirs rgdal rgeos sp stringr uuid]; }; + tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.4"; sha256="0c733mb2fzskrfa4664w6psp80wdr5hc7f9rp516y59a8rr3xzr0"; depends=[DBI RSQLite]; }; + tigris = derive2 { name="tigris"; version="0.3.3"; sha256="11wpxzh7045n9ss5rjhiz2b6cmgj7rnfwrxwnp9kqf0dcaaqx0hv"; depends=[httr magrittr maptools rappdirs rgdal rgeos sp stringr uuid]; }; tikzDevice = derive2 { name="tikzDevice"; version="0.10-1"; sha256="1fjxzmp9wrf9bigzb4hkp2cb64sd6x4yhrjd6gryw17cqrblhicg"; depends=[filehash png]; }; tileHMM = derive2 { name="tileHMM"; version="1.0-7"; sha256="1ks4b6h15982jh3ls9fz8hq9ac1wf5hfjsvdqcmnba8n3m5zm651"; depends=[corpcor st]; }; + tilegramsR = derive2 { name="tilegramsR"; version="0.1.4"; sha256="1flwi9vxq5l92j47z88s50m6k3av2af43bpcmy8j1xkaygic2dlv"; depends=[sp]; }; + tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; }; + time2event = derive2 { name="time2event"; version="0.1.0"; sha256="1xkvarw53lcn07wqq7ly5znr6vjq7x72xb0piq5igdmwqmg2y26g"; depends=[survival timereg]; }; timeDate = derive2 { name="timeDate"; version="3012.100"; sha256="0cn4h23y2y2bbg62qgm79xx4cvfla5xbpmi9hbdvkvpmm5yfyqk2"; depends=[]; }; timeROC = derive2 { name="timeROC"; version="0.3"; sha256="0xl6gpb5ayppzp08wwry4i051rm40lzfx43jw2yn3jy2p3nrcakb"; depends=[mvtnorm pec]; }; - timeSeq = derive2 { name="timeSeq"; version="1.0.1"; sha256="054r5lnvl3wj92sx78qwh0mgrcncwqn94ph941knjwnbds4g2arj"; depends=[doParallel edgeR foreach gss lattice pheatmap reshape]; }; + timeSeq = derive2 { name="timeSeq"; version="1.0.2"; sha256="05ncs12afww2apa9sm71x30kjp3ns2l6c5dzrbc2inmy2bss5fy6"; depends=[doParallel foreach gss lattice pheatmap reshape]; }; timeSeries = derive2 { name="timeSeries"; version="3022.101.2"; sha256="0yr5j8w6p0k05g76hjhkrbx3vb166p5916grigc1yag6baj6nsij"; depends=[timeDate]; }; - timedelay = derive2 { name="timedelay"; version="1.0.2"; sha256="15hmby937zf7gs8lhbaxkpdjbg6vrfz7jg41p25mik1d5q8qf2v0"; depends=[mnormt]; }; + timedelay = derive2 { name="timedelay"; version="1.0.5"; sha256="1b3qm46xyrssla11kcxmy9j5bhy9bzcqfvalwny3cgbjmzsc0pa9"; depends=[mnormt]; }; timeit = derive2 { name="timeit"; version="0.2.1"; sha256="0fsa67jyk4yizyd079265jg6fvjsifkb60y3fkkxsqm7ffqi6568"; depends=[microbenchmark]; }; timeline = derive2 { name="timeline"; version="0.9"; sha256="0zkanz3ac6cgsfl80sydgwnjrj9rm7pcfph7wzl3xkh4k0inyjq3"; depends=[ggplot2]; }; + timelineS = derive2 { name="timelineS"; version="0.1.1"; sha256="076w8ckzzl59bc1gnwjgdwynnz86320hyfmzb0k26hl3k13jlmxs"; depends=[dplyr ggplot2 lubridate magrittr]; }; timeordered = derive2 { name="timeordered"; version="0.9.8"; sha256="1j0x2v22ybyl3l9r3aaz5a3bxh0zq81rbga9gh63zads2xy5axmf"; depends=[igraph plyr]; }; - timereg = derive2 { name="timereg"; version="1.8.9"; sha256="12l8sz10ic8d34jd7ik8szg2d51pr949nsss20c5l5g3kfnvqkkh"; depends=[lava numDeriv survival]; }; + timereg = derive2 { name="timereg"; version="1.9.0"; sha256="1rhnbi2gs1pc2nsqcf1qs3x6v1c83l21p1yq8invzgikwdmg4dhy"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.2.1"; sha256="0150zs8c8184jzry33aki21prmpnxp3rclp84q6igwxi4grdhlr0"; depends=[DBI reshape2 RJSONIO RPostgreSQL shiny xts zoo]; }; - timetools = derive2 { name="timetools"; version="1.7.3"; sha256="0mdj2sm72wv3mswfib8svpyai735z59917bk33pzb7rz246g3hb8"; depends=[]; }; + timetools = derive2 { name="timetools"; version="1.9.1"; sha256="12q3lbma8w3961apsifikngm17lw9vj2xl29rygdiizmk61ll4ha"; depends=[]; }; timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; }; + timevis = derive2 { name="timevis"; version="0.4"; sha256="08caa5gilh1c0z41lm3ghf6cpnlsdjfm1v7ha73jxv1655kznmpx"; depends=[htmltools htmlwidgets jsonlite magrittr rmarkdown shiny]; }; timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; }; - timsac = derive2 { name="timsac"; version="1.3.3"; sha256="0jg9mjzzfl94z4dqb2kz0aiccpclnbyf9p08x3a3cw1y6wqmzrmy"; depends=[]; }; + timsac = derive2 { name="timsac"; version="1.3.5"; sha256="1p2fwizq95fhbw0jk23sy0qgkkkab0iy37sw71krpm0dzrgi6lj0"; depends=[]; }; + tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; + tint = derive2 { name="tint"; version="0.0.3"; sha256="1ffysnp2q4g123lgyhjw92j9dwh8b1yfqsrpqfv4s9qnjb6bqr7z"; depends=[htmltools knitr rmarkdown]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; - tis = derive2 { name="tis"; version="1.30"; sha256="0bqvnaxqqq4962wfw4s9rf0qil613mplqcjwjlq1s9yfxl78gzzw"; depends=[]; }; + tis = derive2 { name="tis"; version="1.32"; sha256="1qiywhsqgshs5v7780wlyic9ykxdpf26rsywakmb4y6fc3pjrhi7"; depends=[]; }; titan = derive2 { name="titan"; version="1.0-16"; sha256="0x30a877vj99z3fh3cw9762j5ci56964j2466xfbwcywhn9njz5r"; depends=[boot lattice MASS]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; tkrgl = derive2 { name="tkrgl"; version="0.7"; sha256="1kpq5p6izqrn1zr53firis3rmifq9lf6326lf3z7l1p82nf2yps5"; depends=[rgl]; }; tkrplot = derive2 { name="tkrplot"; version="0.0-23"; sha256="1cnyszn3rmr1kwvi5a178dr3074skdijfixf5ln8av5wwcy35947"; depends=[]; }; tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; - tlm = derive2 { name="tlm"; version="0.1.3"; sha256="1jj8yihq4b13wavflkkv91m9ba2l5ar3vcwp1ss6iymyf3hzdgiv"; depends=[boot]; }; + tlm = derive2 { name="tlm"; version="0.1.4"; sha256="041ydlbsn0dxggrvfjfpg2jmns3c4z021f64cl2k1lwmxvqrp265"; depends=[boot]; }; tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; }; - tlnise = derive2 { name="tlnise"; version="2.0"; sha256="1vh998vqj359249n9zmw04rsivb7nlbdfgzf20pgh2sndm3rh8qz"; depends=[]; }; tm = derive2 { name="tm"; version="0.6-2"; sha256="0q7plaqgc2ypihnz3dyjv2pwa0aimd4kv5i2z6m7aycc4wkmc7j4"; depends=[NLP slam]; }; tm_plugin_alceste = derive2 { name="tm.plugin.alceste"; version="1.1"; sha256="0wid51bbbx01mjfhnaiv50vfyxxmjxw8alb73c1hq9wlsh3x3vjf"; depends=[NLP tm]; }; tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-8"; sha256="0z843i2wlmx75748p95jz3j45d9bzmlmqa3awgya24k7bdhpd6kd"; depends=[DSL NLP slam tm]; }; - tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.3"; sha256="04sqaqmi00xm85732sk5iqv6ywfqh52qkkk0wv8xzqxwsixf3hyc"; depends=[NLP tm XML]; }; - tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.5"; sha256="06s75rwx9fzld1dw0nw6q5phc1h0zsdzhy1dcdcvmsf97d4s2qdr"; depends=[NLP tm XML]; }; - tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.2"; sha256="0cjw705czzzhd8ybfxkrv0f9kvmv9pcswisc7n9hkx8lxi942h19"; depends=[ISOcodes NLP tm XML]; }; + tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; }; + tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.6"; sha256="1g4gqhha4936whnir1j31jlcbg9x6jhay7yl1c2pzhldldqj98ih"; depends=[NLP tm XML]; }; + tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.3"; sha256="056fvhd7m1z7pqmllq2l36v1zm2iwrmii3andhr22894qk99kck1"; depends=[ISOcodes NLP tm XML]; }; tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.1"; sha256="0ca2w2p5zv3qr4zi0cj3lfz36g6xkgkbck8pdxq5k65kqi5ndzyp"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; - tmap = derive2 { name="tmap"; version="1.4"; sha256="1krdp213j26xr6a5pdb6a5d2pgx521a718kp2rcrrbw9ifgh4j1q"; depends=[classInt geosphere htmltools htmlwidgets KernSmooth leaflet osmar raster RColorBrewer rgdal rgeos sp spdep XML]; }; + tmap = derive2 { name="tmap"; version="1.8-1"; sha256="193mkyby2rwx917b4bh0fg1ds6hc67ml1ch6wva1dssnkasn2x5i"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; + tmaptools = derive2 { name="tmaptools"; version="1.2"; sha256="1ljqrajzjl2qcxp55awy79p4d8z4phlkj2kmlqd8fk00lfbig2qp"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; - tmle = derive2 { name="tmle"; version="1.2.0-4"; sha256="11hjp2vak1zv73326yzzv99wg8a2xyvfgvbyvx3jfxkgk33mybbm"; depends=[SuperLearner]; }; + tmle = derive2 { name="tmle"; version="1.2.0-5"; sha256="06pan7kf1ffs587kayrscqcp4d613ismpzxp8fhfzga02vzvc3a2"; depends=[SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; tmlenet = derive2 { name="tmlenet"; version="0.1.0"; sha256="1pg9w7yci9j0m1cxi0nwdpp6jwap0b7ql4xkh25kjbq3w5r8w8pr"; depends=[assertthat data_table Matrix R6 Rcpp simcausal speedglm stringr]; }; - tmod = derive2 { name="tmod"; version="0.24"; sha256="1v3yc2x9kchj8mg3h9111g55j2vzz484qx2k3kydsa1a77lv0rdf"; depends=[beeswarm pca3d tagcloud XML]; }; + tmod = derive2 { name="tmod"; version="0.31"; sha256="1qqzngqnj4vk170ild34fpzsnpb1125zisf6xx5hp8q899z88q81"; depends=[beeswarm pca3d plotwidgets tagcloud XML]; }; tmpm = derive2 { name="tmpm"; version="1.0.3"; sha256="1fqk39zyc07gh0ygi7pfljlnj6ih37jsb7bcxm05zcd4796wil8j"; depends=[reshape2]; }; - tmvnsim = derive2 { name="tmvnsim"; version="1.0-1"; sha256="1zl1adx5klhg33j87kx8hqvn7mdyfqi12xxljf29abdqmr4pkp95"; depends=[]; }; + tmvnsim = derive2 { name="tmvnsim"; version="1.0-2"; sha256="03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp"; depends=[]; }; tmvtnorm = derive2 { name="tmvtnorm"; version="1.4-10"; sha256="1w3kmpx25l7rb80vpclqq4pbbv12qgysyqxjq3lp55l9nklkb7qs"; depends=[gmm Matrix mvtnorm]; }; - tnam = derive2 { name="tnam"; version="1.6"; sha256="138jn4qdhk1c0mk43b8n5rr2zb20svli82kj1vkl75gxri0d5i26"; depends=[igraph lme4 network Rcpp sna vegan xergm_common]; }; + tnam = derive2 { name="tnam"; version="1.6.2"; sha256="09wqsqjssnzirx387y2mdd6qa38hlbf1d8s0dwzsz2jxx4w8xp01"; depends=[igraph lme4 network Rcpp sna vegan xergm_common]; }; tnet = derive2 { name="tnet"; version="3.0.14"; sha256="05cc6jrkjbwxzmgzq30h63xzhlgq8f0l3wx2q54vrv0wpvlvfphn"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="0.0-6"; sha256="13mp6sxjbn1piw2q018nb4hznzsa2c7pkvmlv74f8qsjrvvw1h4x"; depends=[]; }; - toaster = derive2 { name="toaster"; version="0.4.2"; sha256="0jz3gi8cblwqgl6kq6glhf2cb6r16davm850gz9s2i5synk4p2v7"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; }; + toaster = derive2 { name="toaster"; version="0.5.5"; sha256="0ga4l3zp422scrgvz701rjznn013vhsbp4gh7v1inqp7kpxafky9"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise network plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; }; + tokenizers = derive2 { name="tokenizers"; version="0.1.4"; sha256="1qcsmcd74i39wql9p49g3pzc4flpi8jq9sxia5mcdx054viijgk9"; depends=[Rcpp SnowballC stringi]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; - tolerance = derive2 { name="tolerance"; version="1.2.0"; sha256="0qvbmv4pq4mczr0ikhha52l0wc6rsb4h9mggsv8dg7g6snrrjb0h"; depends=[rgl]; }; - topicmodels = derive2 { name="topicmodels"; version="0.2-3"; sha256="1jhz4455p1bnw8cm11xnj5w3v1v9dgmzq9zmxl6a4l6x4v12di88"; depends=[modeltools slam tm]; }; + tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; + topicmodels = derive2 { name="topicmodels"; version="0.2-4"; sha256="0hqgq8lkaj5p4lvjgyyw8vh8j85khqvvrm8vw172dbj997x2izi4"; depends=[modeltools slam tm]; }; topmodel = derive2 { name="topmodel"; version="0.7.2-2"; sha256="1nqa8fnpxcn373v6qcd9ma8qzcqwl2md347yql3c8bpqlm9ggz16"; depends=[]; }; - topologyGSA = derive2 { name="topologyGSA"; version="1.4.5"; sha256="1v6plj7v0i5fr6khl0ls34xc0hfd61cpabqpw5s1z3mqmqnma56a"; depends=[fields graph gRbase qpgraph]; }; + topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; + touch = derive2 { name="touch"; version="0.1-3"; sha256="1zzc4h6y0xmr3p7jl0vlvn4yswxz5akgvz8laxgmjgqzk926g9jl"; depends=[stringr]; }; tourr = derive2 { name="tourr"; version="0.5.4"; sha256="11xg5slvx7rgyzrc0lzandw7vr7wzk3w2pplsnyrqq3d990qp40d"; depends=[]; }; tourrGui = derive2 { name="tourrGui"; version="0.4"; sha256="1g9928q3x9rrd9k3k84r201wss3vjd2pngvbaflk5dqh9yf75jpq"; depends=[Cairo colorspace gWidgets RGtk2 tourr]; }; + toxboot = derive2 { name="toxboot"; version="0.1.1"; sha256="0sw0mxhcq5k11swlhfpn6xk0nfsambh2yx1721zx75lya27wkmq1"; depends=[data_table tcpl]; }; toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; }; + tpAUC = derive2 { name="tpAUC"; version="2.0.1"; sha256="066fzlkcdma3id56i9qm3bpq9a9lamqkq00qlz7paqxsfph1rn5k"; depends=[pROC]; }; tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; }; tpr = derive2 { name="tpr"; version="0.3-1"; sha256="0nxl0m39zaii6rwm35hxcdk6iy2f729jjmhc2cpr8h0mgvgqf19d"; depends=[lgtdl]; }; + tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; - track = derive2 { name="track"; version="1.1.8"; sha256="0scrww0ba1lrv39fh416wcbzblxnd9f7lp2w24hyp0zbbf1nxs68"; depends=[]; }; - trackeR = derive2 { name="trackeR"; version="0.0.1"; sha256="06c5k7c12nnhy00xly4j0f2hn4wl8i9gm1fiy3q9j6g7hyyrgvx5"; depends=[ggplot2 zoo]; }; - tractor_base = derive2 { name="tractor.base"; version="2.5.0"; sha256="17s4iyp67w7m8gslm87p3ic5r9iq7x1ifpxqrmnin3y5a3d04f5v"; depends=[reportr]; }; + track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; + trackeR = derive2 { name="trackeR"; version="0.0.5"; sha256="0c1wfc41a0n9ldz7mmcss3m2c7lz5wjmv5ifwn9h6ih7wng9d707"; depends=[colorspace fda ggmap ggplot2 gridExtra gtable jsonlite leaflet raster RSQLite scam XML zoo]; }; + tractor_base = derive2 { name="tractor.base"; version="3.0.7"; sha256="19rnsk0v34zlic12839zfp1rrmv7dq4pl1wq5c6hcnsjrbw731wn"; depends=[ore reportr]; }; traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; }; traits = derive2 { name="traits"; version="0.2.0"; sha256="0qsnlp96ilwmaimph0bvkjw4kaqd3wpfy6knd7k5s321b68hqaam"; depends=[data_table dplyr httr jsonlite readr rvest taxize xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; trajectories = derive2 { name="trajectories"; version="0.1-4"; sha256="0vwfbx5s8ywasxwv8cld4s6r96vlyknxipp49rsfpqn94nawhwnx"; depends=[lattice sp spacetime]; }; + tranSurv = derive2 { name="tranSurv"; version="1.1-4"; sha256="1vsp12x4h0s1lba1kf7n0v71kgm1dz6cjfp8lffm4ps80nahs63l"; depends=[rootSolve SQUAREM survival]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; translateR = derive2 { name="translateR"; version="1.0"; sha256="11kh9hjpsj5rfmzybnh345n1gzb0pdksrjp04nzlv948yc0mg5gm"; depends=[httr RCurl RJSONIO textcat]; }; translateSPSS2R = derive2 { name="translateSPSS2R"; version="1.0.0"; sha256="11qnf44aq0dykcsv29faa9r4fcw9cc9rkgczsqx3mngvg3bilada"; depends=[car data_table e1071 foreign Hmisc plyr stringr tidyr zoo]; }; translation_ko = derive2 { name="translation.ko"; version="0.0.1.5.2"; sha256="1w5xibg4znhd39f3i0vsqckp6iia43nblqxnzgj0ny6s7zmdq1wd"; depends=[]; }; - transport = derive2 { name="transport"; version="0.7-3"; sha256="1rgbpj8n88fqw2ivdjhfl9jggazhh7hpalnpfv1rmf96khm76cc0"; depends=[]; }; + transport = derive2 { name="transport"; version="0.8-1"; sha256="1lz5gn9rrg1lyxl6l0r2b0vj4756xq0gb41mfg2darww6b4ifx5v"; depends=[]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; treatSens = derive2 { name="treatSens"; version="2.0.1"; sha256="0gb14f9dfa9slppl2a2bchkli51rprw6wzyzrkxlfqlski0piymf"; depends=[dbarts]; }; tree = derive2 { name="tree"; version="1.0-37"; sha256="091297qhvqhgjmnyr96jkwaghz8dkbf03rnhwfhks8bsgax6jl13"; depends=[]; }; - treeClust = derive2 { name="treeClust"; version="1.1-1"; sha256="06293w4r1h845jqzdqfnh7w5nsvyz4d0h6nn0w2aj4addj3sbp9y"; depends=[cluster rpart]; }; - treebase = derive2 { name="treebase"; version="0.1.2"; sha256="0rn47gd1kggwwgzxqkjq364l1dcnw8ilqzmnr2cnkyzlx1afk5f3"; depends=[ape RCurl XML]; }; - treeclim = derive2 { name="treeclim"; version="1.0.16"; sha256="0fn79hmn266473ygi0pdkqgcycs7wy2fmvh974xl8bv1rh42sml0"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; + treeClust = derive2 { name="treeClust"; version="1.1-6"; sha256="07cw8mnfrkw733ga3aq4am1pj50g8vk0rw6b3lflnb4wdhm2fgbi"; depends=[cluster rpart]; }; + treeHFM = derive2 { name="treeHFM"; version="1.0.3"; sha256="10pyvyyz9ia4dpj8zkil56ipbvbks5xh0n9hkdy0hcinsyq0ba29"; depends=[mclust]; }; + treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; + treeclim = derive2 { name="treeclim"; version="2.0.0"; sha256="0hiba5xc6rp5zzka31k5klmlllpgbnla4pm920zk12jxn796953l"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; - treemap = derive2 { name="treemap"; version="2.4"; sha256="097w7zn1dkv0whs2hsysvk7c05aj1a862sxnpk8ackdi2rmdj4xa"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; + treeman = derive2 { name="treeman"; version="1.0"; sha256="0nbcvyqqd75vvms1bvalm7bq59wfg4fdcql7ydhkrjdv0mf0753m"; depends=[plyr]; }; + treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; - treeplyr = derive2 { name="treeplyr"; version="0.1"; sha256="0y13m5ky3wyxf2d8np1xrd2ffrh814apyqkhd637mqwj58nnwbgy"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; - treescape = derive2 { name="treescape"; version="1.8.15"; sha256="12lhv1qlpj5c8k76zh7mvz3h6xqjp6ri7rfsawz4wzmhzfmagllz"; depends=[ade4 adegenet adegraphics adephylo ape combinat phangorn Rcpp RLumShiny shiny shinyBS shinyRGL]; }; - treethresh = derive2 { name="treethresh"; version="0.1-8"; sha256="1xkbqlr9gkpw6axzl7v5aipackhvy873yrpwn2b9zqr35pj06pr6"; depends=[EbayesThresh wavethresh]; }; - trend = derive2 { name="trend"; version="0.1.0"; sha256="0nxayjs542lszl2vj1xi54fbl8h72rm0k7d92l7w7h7ldvqksiiz"; depends=[]; }; + treeplyr = derive2 { name="treeplyr"; version="0.1.2"; sha256="03bfl7pqhw2isffnfli82bw6la41rfqcshh9dhlbnlwr7yj69m4x"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; + treescape = derive2 { name="treescape"; version="1.10.18"; sha256="1vfyqap1696pz212x7jqrga94a8vs61r6fr7vh86nxiayf6fz7b3"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; + treethresh = derive2 { name="treethresh"; version="0.1-9"; sha256="1fmnmfgaysbnqn002zgcm1d2kpzc7is2k2z859hj0h0ll3yjp592"; depends=[EbayesThresh wavethresh]; }; + trelliscope = derive2 { name="trelliscope"; version="0.9.7"; sha256="1hczmi3hjlk1nqd4p2m2hs89a86jrg59rraxw5z5fm0pa92xnzqy"; depends=[base64enc curl data_table datadr digest DistributionUtils ggplot2 hexbin htmltools htmlwidgets jpeg jsonlite lattice png rsconnect shiny]; }; + trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; + trend = derive2 { name="trend"; version="0.2.0"; sha256="0kq2j9rky8kad3rfkwqys2s9hivrqy4yb03q80dvgz856bsh5fiw"; depends=[]; }; triangle = derive2 { name="triangle"; version="0.10"; sha256="02s7iblk3fdrjhz0sns76bqrfwi0y0l6vbjfsb5mzq6pn45n0nkv"; depends=[]; }; + triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; }; trib = derive2 { name="trib"; version="1.2.0"; sha256="0bvz1cvi2fx40b5rdv4gfama11dn20rz4506k4fjsny32yswpqyw"; depends=[zoo]; }; + triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; trifield = derive2 { name="trifield"; version="1.1"; sha256="0xk48fkd5xa3mfn3pwdya0ihpkwnh20sgj3rc7fmzjil47kqscvy"; depends=[]; }; trimTrees = derive2 { name="trimTrees"; version="1.2"; sha256="0v75xf5186dy76332x4w7vdwcz7zpqga8mxrb5all2miq2v45fi8"; depends=[mlbench randomForest]; }; trimcluster = derive2 { name="trimcluster"; version="0.1-2"; sha256="0lsgbg93hm0w1rdb813ry0ks2l0jfpyqzqkf3h3bj6fch0avcbv2"; depends=[]; }; trimr = derive2 { name="trimr"; version="1.0.1"; sha256="0gcn18nwxmax9c35is0nldyh74cw8rg3gj60cixzs9qjnpb9xx3d"; depends=[]; }; trioGxE = derive2 { name="trioGxE"; version="0.1-1"; sha256="1ra86l3i7fhb6nsy8izixyvm6z23shv7fcjmnnpil54995j15ax4"; depends=[gtools mgcv msm]; }; - trip = derive2 { name="trip"; version="1.1-21"; sha256="0rawckw3xd8kz2jn6xgspgl5axabjcp4xh4kp93n3h41xlarv9xa"; depends=[maptools MASS raster sp spatstat]; }; + trip = derive2 { name="trip"; version="1.5.0"; sha256="1qdq3hbqqaa0cmb47ssg3pr3jksni7g4xsc7bsj6wwdw62d9wzf6"; depends=[maptools MASS raster sp spatstat]; }; tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; - tripack = derive2 { name="tripack"; version="1.3-7"; sha256="1kp3zxs1b6mjbrk0bbsz3jjvkxwm97jb0vvr66dpm57abyl1snly"; depends=[]; }; + tripack = derive2 { name="tripack"; version="1.3-8"; sha256="0pf707z6xysxvcs508nadga3mglpvmfk6r061qda8acn58ll1cvb"; depends=[]; }; trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; }; trueskill = derive2 { name="trueskill"; version="0.1"; sha256="0mqvm64fcsxjlh789lqdk6l28q31yhh6jjirwjlgbpxxb90c5107"; depends=[]; }; truncSP = derive2 { name="truncSP"; version="1.2.2"; sha256="1hdi518j3sg9273g01l1jqlmqya3ppim82ma7zakwqpmsjmzw18q"; depends=[boot truncreg]; }; - truncdist = derive2 { name="truncdist"; version="1.0-1"; sha256="0aszs6rz8nydyf2dw1m4fj9fclb0r4vpgqywyaqjkdnhzmyn593g"; depends=[evd]; }; + truncdist = derive2 { name="truncdist"; version="1.0-2"; sha256="02ihw4ixhadwr3sqm6r264i8vpcaz8pn69vkzabd8fwqvn5vcj5q"; depends=[evd]; }; truncgof = derive2 { name="truncgof"; version="0.6-0"; sha256="0b499i9zjwvva5jfl9fj02jjrgy8myxqfjwa0cjg0jrpgxczgwg8"; depends=[MASS]; }; truncnorm = derive2 { name="truncnorm"; version="1.0-7"; sha256="1qac05z50618y4bw1d7yznsli1bv82s0g8h37iacrjrdkv87bmy7"; depends=[]; }; - truncreg = derive2 { name="truncreg"; version="0.2-1"; sha256="0qvdfj93phk1s2p4n0rmpf8x9gj5n1j75h4z424mrg10r24699rd"; depends=[maxLik]; }; + truncreg = derive2 { name="truncreg"; version="0.2-4"; sha256="1rmf1v2khsx82yzyyk51k7fbnbchf21lj9yqrays1z2mx3p1l1fc"; depends=[maxLik]; }; trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; }; trustOptim = derive2 { name="trustOptim"; version="0.8.5"; sha256="1y9krw2z5skkwgfdjagl8l04l9sbiqbk1fbxp30wrf4qj3pba5w6"; depends=[Matrix Rcpp RcppEigen]; }; - tsBSS = derive2 { name="tsBSS"; version="0.1"; sha256="1r2hcfki53kvngm1vp209z1aqp082a98jr42bzvxgix62wmh2cfj"; depends=[JADE Rcpp RcppArmadillo]; }; - tsDyn = derive2 { name="tsDyn"; version="0.9-43"; sha256="0fhqfwhac1ac1vakwll41m54l88b1c5y34hln5i1y2ngvhy277l1"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; + tsBSS = derive2 { name="tsBSS"; version="0.2"; sha256="1rnfkrmfmha6pjcsl5zicafj5s2agr048j1rmqficyh3km0kz3i7"; depends=[JADE Rcpp RcppArmadillo]; }; + tsDyn = derive2 { name="tsDyn"; version="0.9-44"; sha256="09vxp2zir0vidzfm57j4cgkigsiyqwvr6ssy15ydfjxha30523a7"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.1"; sha256="0sdlcymhljw0di7mi5n4jmgqhfgvqix0jpp07f6wgjbqxkas4wr5"; depends=[KFAS]; }; + tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-2"; sha256="19535zlr6gjg45f8z6hm98pamgn20z19m8qb63997vbj4azsrjfv"; depends=[]; }; tsbridge = derive2 { name="tsbridge"; version="1.1"; sha256="0mry3ia54cdfydpzm8asrq1ldj70gnpb5dqzj51w0jiyps2zlw6f"; depends=[mvtnorm tsbugs]; }; tsbugs = derive2 { name="tsbugs"; version="1.2"; sha256="130v4x6cfy7ddvhijsnvipm4ycrispkj1j0z5f326yb4v5lrk91x"; depends=[]; }; tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; }; - tscount = derive2 { name="tscount"; version="1.0.0"; sha256="0n01biifzjfvnj3zhrn87qigf4l1kij2zfqf6876qz8rps1jz626"; depends=[ltsa]; }; - tseries = derive2 { name="tseries"; version="0.10-34"; sha256="068mjgjcsvgpynkvga8lv430cg8zhlr9frj5yapsxni2vj534pqj"; depends=[quadprog zoo]; }; + tscount = derive2 { name="tscount"; version="1.3.0"; sha256="0zbm096z8nlbk9rd5qkvw5285wpz7qx8avi1md3zv64zmqmny7qa"; depends=[ltsa]; }; + tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; + tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; }; + tseries = derive2 { name="tseries"; version="0.10-38"; sha256="1gs6i28v1v349z7ficzyy9pfrm3aw5x8pldrihm3wg8wvs22jwv5"; depends=[quadprog zoo]; }; tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13"; sha256="0f2hycxyvcaj3s1lmva1qy46xr6qi43k8fvnm4md5qj8jp2zkazg"; depends=[deSolve]; }; tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.5-12"; sha256="0z9354mlj0nh829ccwwhs53q5myfp31x9n6kv1k8gmvz5xma40kh"; depends=[cubature]; }; tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; }; + tsiR = derive2 { name="tsiR"; version="0.1.0"; sha256="1h14qpg542zr41dr5vrd34aj6ss3z7c4lzvb5bfaha72zbca1l6s"; depends=[ggplot2 kernlab reshape2]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; - tsna = derive2 { name="tsna"; version="0.1.3"; sha256="10iflkmc1ym01pvj42gxqsdj3ph44jnqc0j4c42c6xl3365xgdfy"; depends=[ergm network networkDynamic statnet_common]; }; - tsne = derive2 { name="tsne"; version="0.1-2"; sha256="12q5s79r2949zhm61byd4dbgw6sz3bmxzcwr8b0wlp8g1xg4bhy6"; depends=[]; }; - tsoutliers = derive2 { name="tsoutliers"; version="0.6"; sha256="1cyh56i7dsnclphi81fab6k8vkdqv8ing2zmpfsjq4gvq76p7piw"; depends=[forecast KFKSDS polynom stsm]; }; + tsna = derive2 { name="tsna"; version="0.2.0"; sha256="09q01jzj1rnv2f2jf7djnq5xrkp7lvykdbf4bfswsy0f95j0asx2"; depends=[network networkDynamic statnet_common]; }; + tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; + tsoutliers = derive2 { name="tsoutliers"; version="0.6-5"; sha256="1d2m51mlqw4npm7vmbaayj4s3rvsrf33abld947ryqvzi5zrwpim"; depends=[forecast KFKSDS stsm]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; + tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; ttScreening = derive2 { name="ttScreening"; version="1.5"; sha256="0qn8lkvgvqpmm368fwpqkm09yaj9mw42mjlikyiwpv2wrgbpmg9n"; depends=[corpcor limma MASS matrixStats sva]; }; - tth = derive2 { name="tth"; version="4.3-2"; sha256="1gs8xjljklvs0pavvn9f59y09hw7x2da58a46b5x01g08i0j8h1d"; depends=[]; }; - tttplot = derive2 { name="tttplot"; version="1.0"; sha256="0kiahy9f4d6cwzj2k3agrgn12z1fkwmy06ldrl064pbx57ky0wnw"; depends=[]; }; + ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; + tth = derive2 { name="tth"; version="4.3-2-1"; sha256="19rvmyprl1nk9mmngk6dax8rnli10msfvm3vzp86pbdjxnsh3hjc"; depends=[]; }; + tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; ttutils = derive2 { name="ttutils"; version="1.0-1"; sha256="18mk30070mcplybg320vjbk9v5flxnbqi5gx0yyr1z6ymjmnrxbc"; depends=[]; }; ttwa = derive2 { name="ttwa"; version="0.8.5.1"; sha256="1lhypcwssq0dspizvln3w4dg16ad6mz8cj4w34c5vsrayqid7fyn"; depends=[data_table]; }; - tuber = derive2 { name="tuber"; version="0.2"; sha256="1frxjk1yzzcn7sza21qn2905z60vpi9b142jxnslncm2dpd2fh65"; depends=[httr]; }; + tuber = derive2 { name="tuber"; version="0.7.0"; sha256="1fcls8q4ihz50wnar87047i8il32a1nrxw67nv9wjqfi02z74c2p"; depends=[httr plyr]; }; tufte = derive2 { name="tufte"; version="0.2"; sha256="0yh5xdxapqpf5hgdn8c2jkk63817l2w6bxavw8457r89rnj1022p"; depends=[htmltools knitr rmarkdown]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; - tuneR = derive2 { name="tuneR"; version="1.2.1"; sha256="1f6mdkfwfy6r62sbwq37sylvcji6f3mj9w13sgicxjn6swbszf57"; depends=[signal]; }; + tuneR = derive2 { name="tuneR"; version="1.3.1"; sha256="0m0fc8bx7645ddbcsvgwamfsd7rklz05wi8yc9p0kf2k5sbn48r3"; depends=[signal]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; turboEM = derive2 { name="turboEM"; version="2014.8-1"; sha256="0g9nm1m542hslz8272n5qz6h59criyf71l2w218dvq34bcjcd3yy"; depends=[doParallel foreach iterators numDeriv quantreg]; }; turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; }; turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; }; - tutorial = derive2 { name="tutorial"; version="0.2.2"; sha256="0594pgjkx2y14gy54vfccwn30w2szdq1q4l85frjbjf7k2z88x4b"; depends=[markdown rmarkdown]; }; + tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; tvm = derive2 { name="tvm"; version="0.3.0"; sha256="1iv0qrks1zdiq8jaqr1h46snq8wc3g3q017hxc8zc6fqnsz1whf6"; depends=[ggplot2 reshape2]; }; - twang = derive2 { name="twang"; version="1.4-9.3"; sha256="06lgawzq3b2jg84rvg24582ndlk8qji4gcbvxz5acf302cvdnmji"; depends=[gbm lattice latticeExtra survey xtable]; }; - tweedie = derive2 { name="tweedie"; version="2.2.1"; sha256="1fsi0qf901bvvwa8bb6qvp90fkx1svzswljlvw4zirdavy65w0iq"; depends=[]; }; - tweenr = derive2 { name="tweenr"; version="0.1.2"; sha256="1s1q9adqdff79bpr2ypfzbsh51kmzqxk2082s49pw5kmina6bacs"; depends=[Rcpp]; }; - tweet2r = derive2 { name="tweet2r"; version="0.4.1"; sha256="0g2y6bs9211wrn8gaqxcrzka27aqh2wcxi00faqkw61pypy4fyxg"; depends=[ggmap ggplot2 plyr rgdal ROAuth RPostgreSQL RSQLite sp streamR]; }; + twang = derive2 { name="twang"; version="1.4-9.5"; sha256="1haj2aj14n0bk2gf00afrqan67986c8l75ps6ig505c2i0z4ivqd"; depends=[gbm lattice latticeExtra survey xtable]; }; + tweedie = derive2 { name="tweedie"; version="2.2.5"; sha256="1n08xdkqklh020zwgkkj6wbf7gyjghjl5wbs0xj83zi9jcmn08sn"; depends=[]; }; + tweenr = derive2 { name="tweenr"; version="0.1.5"; sha256="06h0vhxlljmvxg4a62sqrq53lpbvl5w19dqcpyw1jqvrb5agidnq"; depends=[Rcpp]; }; + tweet2r = derive2 { name="tweet2r"; version="1.0"; sha256="0v7xshk389k3aws72ww9kqc2ycw6l6q9xmhps47g3bdl64jy8bay"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; twiddler = derive2 { name="twiddler"; version="0.5-0"; sha256="0r16nfk2afcw7w0j0n3g0sjs07dnafrp88abwcqg3jyvldp3kxnx"; depends=[]; }; twitteR = derive2 { name="twitteR"; version="1.1.9"; sha256="1hh055aqb8iddk9bdqw82r3df9rwjqsg5a0d2i0rs1bry8z4kzbr"; depends=[bit64 DBI httr rjson]; }; twoStageGwasPower = derive2 { name="twoStageGwasPower"; version="0.99.0"; sha256="1xvy6v444v47i29aw54y29xiizkmryv8p3mjha93xr3xq9bx2mq7"; depends=[]; }; twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; txtplot = derive2 { name="txtplot"; version="1.0-3"; sha256="1949ab1bzvysdb79g8x1gaknj0ih3d6g63pv9512h5m5l3a6c31h"; depends=[]; }; + types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; + uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; + uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; + ubeR = derive2 { name="ubeR"; version="0.1.4"; sha256="1ilclna04hd1ykcp2b3gcj0v4qznwx0d24yavxnf2yh5d91wr6z2"; depends=[dplyr ggmap ggplot2 ggthemes googleway httpuv httr jsonlite]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; - ucminf = derive2 { name="ucminf"; version="1.1-3"; sha256="19gmbz32rhrdagvhf2s901lvi1r6273wzznry5daryq6w1jx5z3v"; depends=[]; }; - udunits2 = derive2 { name="udunits2"; version="0.8.1"; sha256="0nind45v0ispwz0fgksw64w4y5y6za0r3cx07j02zwg911n32r7c"; depends=[]; }; + ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; + udapi = derive2 { name="udapi"; version="0.1.0"; sha256="0hwnrx9qkazja288m6irmwwybiys9npk6sk60acjdczsfrn1hvl0"; depends=[curl httr]; }; + udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; + uiucthemes = derive2 { name="uiucthemes"; version="0.1.1"; sha256="0d1agg94z0qy6k4pbv01p1xb0zh42gkjl5i9kbqblplnk2swkzyi"; depends=[rmarkdown]; }; ukgasapi = derive2 { name="ukgasapi"; version="0.13"; sha256="0bnblha96ldbxj0nqhcj26d1dk2xm6nkjqqval1jlc2pki20mr9n"; depends=[RCurl XML]; }; ump = derive2 { name="ump"; version="0.5-6"; sha256="1nd6miz9scc6llckafl73pxiqh0ycfhlsmn2l0swcvjxpj3kb0zv"; depends=[]; }; - umx = derive2 { name="umx"; version="1.1.5"; sha256="13diwb8p51vh14pb705sbdn2994ha4dfx20s45aj38sqz7igz2x4"; depends=[knitr MASS Matrix mvtnorm numDeriv OpenMx polycor R2HTML RCurl]; }; + umx = derive2 { name="umx"; version="1.5.0"; sha256="0b011ym5hai9c7r1lgr9y3yhscrwq77h6q6llkhklkz35qbz4056"; depends=[DiagrammeR knitr MASS Matrix mvtnorm numDeriv OpenMx polycor R2HTML RCurl sfsmisc]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; - unfoldr = derive2 { name="unfoldr"; version="0.3"; sha256="1zc2a4c228lhflsiypn8z6yn3fl0hr3dpmpzdxfrrijzbfai9215"; depends=[]; }; + unfoldr = derive2 { name="unfoldr"; version="0.6"; sha256="1chxd6b353s56rl78wxr8zzh2vvnj7wbjl6xnakhcchcfqr4zjqd"; depends=[]; }; + ungeneanno = derive2 { name="ungeneanno"; version="0.1.6"; sha256="0fm47vmzn4z73pn37p94r84lbkg5amk0sl78304ibwz0rhlda0y5"; depends=[httr XML]; }; uniCox = derive2 { name="uniCox"; version="1.0"; sha256="1glgk6k8gwxk3haqaswd2gmr7a2hgwjkwk2i1qc5ya7gg8svyavv"; depends=[survival]; }; - uniReg = derive2 { name="uniReg"; version="1.0"; sha256="1xl19dqnxxibgiiny9ysll2z8j1i70qrszf4xbacq1a6z31vm840"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; - uniah = derive2 { name="uniah"; version="0.4"; sha256="1ryfqkry06xhvjls6hrnggd43x4kbah38xxgrb7bjcwl1r25y2n0"; depends=[ahaz Iso survival]; }; + uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; + uniah = derive2 { name="uniah"; version="1.0"; sha256="19zwy33gwa749i81mi9h05k8k3l4xbbln3k6q70fa7ic5lqbbdzj"; depends=[ahaz Iso survival]; }; uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; }; uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; uniqueAtomMat = derive2 { name="uniqueAtomMat"; version="0.1-2"; sha256="15d6s44n1cvhpjsmwjly3nqq7q2zpi2ws6cw5jrxb97gacma896n"; depends=[]; }; unitedR = derive2 { name="unitedR"; version="0.2"; sha256="0glcyji0cypb2687cvyra0zzlzbq0md7qb60abgi0199hf51q3dj"; depends=[plyr]; }; + units = derive2 { name="units"; version="0.4-2"; sha256="0c7nys38157wimmqqz7hglar343nfqkvbaf0bl6by5lbql0kj2vq"; depends=[udunits2]; }; unittest = derive2 { name="unittest"; version="1.2-0"; sha256="1g3f36kikxrzsiyhwpl73q2si5k28drcwvvrqzsqmfyhbjb14555"; depends=[]; }; unmarked = derive2 { name="unmarked"; version="0.11-0"; sha256="0n5cm17ns464dxd9sdma6f12x1phnvv05aiwgxsj499lk6jazf0l"; depends=[lattice plyr raster Rcpp RcppArmadillo reshape]; }; + unpivotr = derive2 { name="unpivotr"; version="0.1.0"; sha256="01pbmfm94i4z0xx7lj9pipw88d5szqgqa6j23m4i8cv8kx48r3p7"; depends=[data_table dplyr dtplyr lazyeval magrittr purrr tibble tidyr]; }; + unsystation = derive2 { name="unsystation"; version="0.1.1"; sha256="0w5llr2kyv7g5fx5yvlyqwj4da5k5fq1f2y70c9pjdzrny9lpz4q"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-2"; sha256="1ha0xj94sz1r325qb4sb5hla9hw1gbqr76703vk792x9696skhji"; depends=[Brobdingnag partitions polynom]; }; + unvotes = derive2 { name="unvotes"; version="0.1.0"; sha256="128jp2iin0xb7xr21s4sd6yprgzc0qssjbhz3vcslbwfl3jp2ch0"; depends=[]; }; upclass = derive2 { name="upclass"; version="2.0"; sha256="0jkxn6jgglw6pzzbcvi1pnq4hwfach3xbi13zwml4i83s3n5b0vg"; depends=[mclust]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; + upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; }; - urca = derive2 { name="urca"; version="1.2-9"; sha256="0x4mrqqr3hfgf3vy60wz4dngy188di8xccryhck9jqjryzj35i6g"; depends=[nlme]; }; - urltools = derive2 { name="urltools"; version="1.3.2"; sha256="0kzjvvllzp51jnvxh70hilh843shi73jxjq2cg8sq6zbp22wv75q"; depends=[Rcpp]; }; - uroot = derive2 { name="uroot"; version="2.0-5"; sha256="1402s52924vas3h37sb6q3qqff9kk79ynq6s3hgz200klxlbvyxk"; depends=[]; }; + uqr = derive2 { name="uqr"; version="0.2.0"; sha256="03v12w1ssfpp3h2aja4wlv6f2x1rplpm3dpmrq78bpyanban2gwf"; depends=[gtools Hmisc]; }; + urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; }; + urlshorteneR = derive2 { name="urlshorteneR"; version="0.9.2"; sha256="1y5n1rn2c7yj5ncxfnsrj9lvaam2j3vvx8ld1vqyjay1r8flzifd"; depends=[httr jsonlite stringr]; }; + urltools = derive2 { name="urltools"; version="1.6.0"; sha256="1vyv88x5l0hr4jhn7sics11g8j6817gn4yjpk58b40ynija42kkb"; depends=[Rcpp triebeard]; }; + uroot = derive2 { name="uroot"; version="2.0-9"; sha256="0nxc8d4v9v5z3wbnj325iq2yrh0mipqgg2rn8pp2jyyq9vb1cxlv"; depends=[]; }; usdm = derive2 { name="usdm"; version="1.1-15"; sha256="1638fv8if7pcnm6y44w3vbmivgcg4a577zd2jwhmp00vrwml2a9m"; depends=[raster sp]; }; - useful = derive2 { name="useful"; version="1.2.0"; sha256="0k701namh9svdb9ag33vr44af9g07nnd8mqrcd8zm512a6clmyx9"; depends=[dplyr ggplot2 magrittr plyr scales]; }; - userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.4-1"; sha256="1nfj7rydrjwpxvqxxa4996957r2d618h49jy6554f2k3ih0bryaj"; depends=[car fBasics foreign GGally ggplot2 GPArotation gridExtra knitr lavaan MASS MBESS mosaic plyr psych pwr SCRT SuppDists xtable]; }; - uskewFactors = derive2 { name="uskewFactors"; version="1.0"; sha256="1ixcxqw8ai77ndn1cfkq53a090fgs95yzvas1qg2siwpfsm4yix6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; - usl = derive2 { name="usl"; version="1.5.0"; sha256="09gv2r44nnyvf2pvdqmk7whqvivvs67w5lk8kw72zb8y6gsjag57"; depends=[nlmrt]; }; + useful = derive2 { name="useful"; version="1.2.1"; sha256="08ihyvyjrdrfba7zasqkg4204nmql4xgwigzs80dks51bpqcq2mv"; depends=[dplyr ggplot2 magrittr plyr scales]; }; + userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.5-2"; sha256="0i5nrfq7hgq3rx43s6p8bxc4yqqjkvn42bbyv6hndzkagp06d2vj"; depends=[car diptest fBasics GGally ggplot2 ggrepel GPArotation gridExtra knitr lavaan MASS MBESS mosaic pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists XML xtable]; }; + uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; + usl = derive2 { name="usl"; version="1.7.0"; sha256="116h8yfij7fkzd8va5w8v977fj2is86vlwzfnv28g3h0avdwysls"; depends=[nlmrt]; }; + usmap = derive2 { name="usmap"; version="0.1.0"; sha256="1v255hl31rhzzggilnxsy30hwwbhsmsl6wyj3qnhxkygbnax7ncd"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; - utility = derive2 { name="utility"; version="1.3"; sha256="0ng7jc45k9rgj9055ndmgl308zjvxd2cjsk2pn57x44rl1lldcj5"; depends=[]; }; + utf8latex = derive2 { name="utf8latex"; version="1.0.4"; sha256="12isrl056h7y7nr7wk52dnvf3frcp66qqy7si869ark2aj81f959"; depends=[]; }; + utility = derive2 { name="utility"; version="1.4"; sha256="088dgi0ybpcrk6g11fs500ymzwshbypikgjy6hxnx79byiwhrscp"; depends=[]; }; + utiml = derive2 { name="utiml"; version="0.1.1"; sha256="118wa66s3cfp00yc9nngf7khaaswrrfj5pb71n66lnxwynf8mdgm"; depends=[mldr]; }; uuid = derive2 { name="uuid"; version="0.1-2"; sha256="1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx"; depends=[]; }; + uwIntroStats = derive2 { name="uwIntroStats"; version="0.0.3"; sha256="1m8n6bans7kkwriqky92vvv2sbdacyq2pvbv2m5p37q7qk5215c2"; depends=[Exact geepack plyr sandwich survival]; }; vacem = derive2 { name="vacem"; version="0.1-1"; sha256="0lh32hj4g1hsa45v6pmfyj1hw0klk8gr1k451lvs4hzpkkcwkqbn"; depends=[foreach]; }; - validate = derive2 { name="validate"; version="0.1.3"; sha256="1bnxqi9af807g8y81sdgag27c206kgl1f3kmsbdaxigch61472sw"; depends=[settings yaml]; }; + vaersNDvax = derive2 { name="vaersNDvax"; version="1.0.4"; sha256="0hvw7vbxs87c9xkdv3617fkjwz2dbawscbd7dgaixhdhcr3k823a"; depends=[]; }; + vaersvax = derive2 { name="vaersvax"; version="1.0.4"; sha256="15znkwbhr624qgwlcrdhaxpdfl85ym845mr2sy8b016d3ngz7n94"; depends=[]; }; + validann = derive2 { name="validann"; version="1.2.0"; sha256="1g8svbxyy56kmzm8yxwk9jqwnwsmlvxm87ss7l88arjl5kqgvasq"; depends=[moments]; }; + validate = derive2 { name="validate"; version="0.1.5"; sha256="166605h47bgcx1sf1rlvvgay00v8ykzw55zbfc5jnw9h8j8f7wsb"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; + validatejsonr = derive2 { name="validatejsonr"; version="1.0.4"; sha256="1n8jf7j3hvz47z1x3gqz5yj5wxfjzz0zgzkgckdvy1nbsqf7w3cr"; depends=[Rcpp]; }; + valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; + valr = derive2 { name="valr"; version="0.1.1"; sha256="0pzkaljlwqpk7n6z4f5lvy2f06a1bjsj6b20sxpd64rh302vn6hi"; depends=[BH broom dplyr ggplot2 lazyeval purrr Rcpp readr shiny stringr tibble tidyr]; }; + valuer = derive2 { name="valuer"; version="1.1.1"; sha256="1pvzhx5irxww6vb8j4nsanlzgwaa4z96vw4l97h6l27h1403gdkb"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; varComp = derive2 { name="varComp"; version="0.1-360"; sha256="18xazjx102j6v1jgswxjdqjb0hq6hd646yhwb7bcplqyls9hzha0"; depends=[CompQuadForm MASS Matrix mvtnorm nlme quadprog RLRsim SPA3G]; }; + varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; }; varSelRF = derive2 { name="varSelRF"; version="0.7-5"; sha256="1800d9vvkqpxjvmiqdr610hw7ji79j0wsbl823s097dndmv51axk"; depends=[randomForest]; }; - varbvs = derive2 { name="varbvs"; version="1.0"; sha256="0ywgb6ibijffjjzqqb5lvh1lk5qznwwiq7kbsyzkwcxbp8xkabjw"; depends=[]; }; + varband = derive2 { name="varband"; version="0.9.0"; sha256="16z66rx7xq5zan8pnw100c9r5syw1ml4hgzi9mch52aia23v21p9"; depends=[Rcpp RcppArmadillo]; }; + varbvs = derive2 { name="varbvs"; version="2.0.0"; sha256="1bi11qcgnw263p1vv25nhcf9b0vf04bl6hpb9agw1rp1f7c9xsrb"; depends=[lattice latticeExtra]; }; vardiag = derive2 { name="vardiag"; version="0.2-1"; sha256="07i0wv84sw035bpjil3cfw69fdgbcf2j8wq4k22narkrz83iyi2z"; depends=[]; }; - varhandle = derive2 { name="varhandle"; version="1.0.0"; sha256="1bpnzgx7gz95pgn13w7z5gq2lyhm549mc5697kx0625hpk13gddj"; depends=[]; }; + vardpoor = derive2 { name="vardpoor"; version="0.8.4"; sha256="1w2l3pz4qwsx376wd4vzkfs1xajsy10fkkhmn7gmvrvi899afmh3"; depends=[data_table foreach gdata laeken MASS plyr stringr surveyplanning]; }; + varhandle = derive2 { name="varhandle"; version="2.0.1"; sha256="06n13dyq41dr0gsq2bzkqqraqqkab93n7gimln4ckkdnrv0a1crx"; depends=[]; }; variables = derive2 { name="variables"; version="0.0-30"; sha256="182c8c7cwkmrpk01bki94y6f3wgf2zdjvvcfa4paa6bfq8w9ckh3"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; vars = derive2 { name="vars"; version="1.5-2"; sha256="1q45z5b07ww4nafrvjl48z0w1zpck3cd8fssgwgh4pw84id3dyjh"; depends=[lmtest MASS sandwich strucchange urca]; }; - vartors = derive2 { name="vartors"; version="0.2.6"; sha256="04dynqs903clllk9nyynh3dr7msxn5rr5jmw6ql86ppd5w3da0rl"; depends=[]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; - vcd = derive2 { name="vcd"; version="1.4-1"; sha256="1529q8gysqzpgphsnqdwqqr630i4k1kr0zdbmxqq5wpy5r97fk5g"; depends=[colorspace lmtest MASS]; }; + vcd = derive2 { name="vcd"; version="1.4-3"; sha256="05azric2w8mrsdk7y0484cjygcgcmbp96q2v500wvn91fj98kkhp"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-0"; sha256="0ggkv0khn9h6b787dnmkk38fkxgp84k4nn1c3gm12i7n47r58ygr"; depends=[ca gnm MASS vcd]; }; - vcfR = derive2 { name="vcfR"; version="1.0.0"; sha256="0dlypblqa966lgcib3w6sw357w1mdq3nlp9f0c6846alh952j4v4"; depends=[ape memuse Rcpp]; }; - vcrpart = derive2 { name="vcrpart"; version="0.4-1"; sha256="1wrbjxh4kvz6yll9d002y3vpz9p8fa1lmqqvyz3w2nnwq4s9r4hc"; depends=[nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; - vdg = derive2 { name="vdg"; version="1.1.3"; sha256="07lk6q0iqszwcxzbkkyk9ywcs4lxi14w6j3crgd0xvr5x6kh3qcz"; depends=[ggplot2 gridExtra proxy quantreg]; }; - vdmR = derive2 { name="vdmR"; version="0.2.2"; sha256="1z7m7myv6wpmd8i7v5b1r7n4zmjawbj5i5r27jiqw9id33xn1qpi"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr rjson Rook]; }; + vcfR = derive2 { name="vcfR"; version="1.4.0"; sha256="18mgkk8msysb1xahcyp9slj7lvr3xaiwchr8y6sxrvmn1a940wvf"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tidyr vegan viridisLite]; }; + vcrpart = derive2 { name="vcrpart"; version="0.4-2"; sha256="16ai6x9x068s91013k980svarpkr310a4mihmcl00mx7bf5lsww3"; depends=[nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; + vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; + vdiffr = derive2 { name="vdiffr"; version="0.1.1"; sha256="1aqmawwhz67j7rzrd6cabxvma532mndk3iy3wq2xdm9liwpn9yq4"; depends=[devtools fontquiver gdtools htmlwidgets purrr R6 Rcpp shiny svglite testthat xml2]; }; + vdmR = derive2 { name="vdmR"; version="0.2.3"; sha256="1bvll48lc609zdq0y1d2s95ihzj9a14wkg67i4h87d4akd280k6z"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr rjson Rook sp]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; vecsets = derive2 { name="vecsets"; version="1.1"; sha256="0k27g3frc9y9z2qlm19kfpls6wl0422dilhdlk6096f1fp3mc6ij"; depends=[]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; - vegan = derive2 { name="vegan"; version="2.3-4"; sha256="1nggyj8nmm9vf3cj4ldyjand5qmpqbkqypwdrk00lrr18ilfpvxr"; depends=[cluster lattice MASS mgcv permute]; }; - vegan3d = derive2 { name="vegan3d"; version="1.0-0"; sha256="0g9plc9ba51qva5vaa82xkn0izrha44pvsvkh2ppcwgqyaiv9xsd"; depends=[rgl scatterplot3d vegan]; }; - vegclust = derive2 { name="vegclust"; version="1.6.3"; sha256="0l6j4sgzfqvcypx2dszpnsd1sivk33pixlgf9abqifp45skpkwfg"; depends=[sp vegan]; }; - vegdata = derive2 { name="vegdata"; version="0.8.9"; sha256="1hv8l2ynzxmpjq438zqhk59sgiwkvgvqdgp7z0dpx24x6q5rzw6s"; depends=[foreign httr jsonlite XML]; }; + vegan = derive2 { name="vegan"; version="2.4-2"; sha256="12wf64izrpq9z3ix7mgm5421mq0xsm8dw5qblvcrz452nfhjf5w9"; depends=[cluster lattice MASS mgcv permute]; }; + vegan3d = derive2 { name="vegan3d"; version="1.0-1"; sha256="19xwbmnmhdvm8vsfjv17bhbjrlsr2wwgjj0nflw8kgmlz0d2f70k"; depends=[cluster rgl scatterplot3d vegan]; }; + vegclust = derive2 { name="vegclust"; version="1.6.5"; sha256="0y1lh4d2i3nxgc30wp6f14v2p14bx399y4cr5r7gv2gi76c5bhj4"; depends=[sp vegan]; }; + vegdata = derive2 { name="vegdata"; version="0.9"; sha256="0hk56nbzg1c1q6shz9b04d60w9gd71f4fhyy89l98mcr41g8hjbc"; depends=[foreign httr jsonlite XML]; }; vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; - venn = derive2 { name="venn"; version="1.1"; sha256="0anpzavc1pppxb95186v7plr3skv2achhpkc1yav2nx0jhsd5i9h"; depends=[]; }; + velociraptr = derive2 { name="velociraptr"; version="1.0"; sha256="1n7q08i37qbbh5cjq6jb4gmpzzip3wx2wx8xx5wpkln8n3nyiqki"; depends=[RCurl rgdal]; }; + velox = derive2 { name="velox"; version="0.1.0"; sha256="0jiza6myx4fj26agzbqjllr34f5kpmgcidrrv1r8jasljsbqf0n1"; depends=[raster Rcpp rgdal rgeos sp]; }; + vembedr = derive2 { name="vembedr"; version="0.1.2"; sha256="0pqjf55rgylszgmzdhzr7m0lcqw3dw6c49i45r39yiq3wprc55qa"; depends=[htmltools httr magrittr stringr]; }; + venn = derive2 { name="venn"; version="1.2"; sha256="18il18i13p92dm167c6mwppzjldp2blq482l5206lp1gqvxyc7f0"; depends=[]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; verification = derive2 { name="verification"; version="1.42"; sha256="0pdqvg7cm9gam49lhc2xy42w788hh2zd06apydc95q2gj95xnaiw"; depends=[boot CircStats dtw fields MASS]; }; - versions = derive2 { name="versions"; version="0.2"; sha256="0kfbsl2wzwaw7v3vd407zaahkslpm51mp68w87m72nvsqlbhiixw"; depends=[]; }; + versions = derive2 { name="versions"; version="0.3"; sha256="0zm49j785dgv7fyr1yl9q5f0dsk8hhpim5q5bpkgrkzv7pwjribd"; depends=[]; }; vertexenum = derive2 { name="vertexenum"; version="1.0.1"; sha256="060sfa22m35d1hqxqngxhy7bwjihf6b4sqa1kg5r0cqvdw9zg51d"; depends=[numbers]; }; vetools = derive2 { name="vetools"; version="1.3-28"; sha256="1470xgqdq9n5kj86gdfds15k3vqidk3h99zi3g76hhyfl8gyl1c0"; depends=[lubridate maptools plyr scales sp stringr tis xts]; }; - vines = derive2 { name="vines"; version="1.1.4"; sha256="18nsxbi8s325l1bbhqn1y5nx1zdbbfwdlb6bv1xxnc1504sf5xz2"; depends=[ADGofTest copula cubature TSP]; }; + vhica = derive2 { name="vhica"; version="0.2.4"; sha256="0km49lrzn9rm3wxadwxc290dvx3bsblbmna7f9lnkq6g1z5jdqwg"; depends=[]; }; + vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; + vines = derive2 { name="vines"; version="1.1.5"; sha256="057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1"; depends=[ADGofTest copula cubature TSP]; }; violinmplot = derive2 { name="violinmplot"; version="0.2.1"; sha256="1j3hb03y988xa704kp25v1z1pmpxw5k1502zfqjaf8cy4lr3kzsc"; depends=[lattice]; }; vioplot = derive2 { name="vioplot"; version="0.2"; sha256="16wkb26kv6qr34hv5zgqmgq6zzgysg9i78pvy2c097lr60v087v0"; depends=[sm]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; - vipor = derive2 { name="vipor"; version="0.3.2"; sha256="12c4f2f5h6na24dra4sj3p8jssswnx6mx60a9ir8mh584npqjhmp"; depends=[]; }; + vipor = derive2 { name="vipor"; version="0.4.4"; sha256="0p1z9a3fazl78pj8a1i2n62v8hrs8cinq82j9wpawhmfkn3dggss"; depends=[]; }; viridis = derive2 { name="viridis"; version="0.3.4"; sha256="1a9hqn2pccpc51vh8ghw698ni6xzdnp8v0n8kgjh51nlz5hhc87j"; depends=[ggplot2 gridExtra]; }; viridisLite = derive2 { name="viridisLite"; version="0.1.3"; sha256="1b0fhj8i1m9jsz91gzag60k7vy7kk5xkdg31rc3h3spq96l66psp"; depends=[]; }; - virtualspecies = derive2 { name="virtualspecies"; version="1.1"; sha256="0znrb6xqyzddd1r999rhx6ix6wgpj1laf5bcns7zgmq6zb39j74s"; depends=[ade4 dismo raster rworldmap]; }; - visNetwork = derive2 { name="visNetwork"; version="0.2.1"; sha256="1jyxkl0d1r7iqw180xb82nykix4w035pxgbvvvl3x5d0bg1892p6"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; - visreg = derive2 { name="visreg"; version="2.2-2"; sha256="04i7908cqjwqlcggp5fv6w21kp4bhkn0ggy0qw3ff7pfs6dz66x4"; depends=[lattice]; }; + virtualspecies = derive2 { name="virtualspecies"; version="1.4-1"; sha256="02n83j10z7m8bjlavm2c6v58z1flhxn36j0h00c5xm085brzww3y"; depends=[ade4 dismo raster rworldmap]; }; + virustotal = derive2 { name="virustotal"; version="0.2.0"; sha256="0c2ig1wki08cq41ma1bawxgyzlkqv2j6kjlsapdry12vm42rz1yc"; depends=[httr plyr]; }; + visNetwork = derive2 { name="visNetwork"; version="1.0.3"; sha256="0wq37srnra6vzzw3d3c5lfvdqpd5329s73zrr9cd2saa6ski23i1"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; + visreg = derive2 { name="visreg"; version="2.3-0"; sha256="05vs3zs8dpdqgk004lc2dnhqjgbfjh1ak17y5c8gni6wkp27hl7y"; depends=[lattice]; }; + vistime = derive2 { name="vistime"; version="0.3.0"; sha256="07vri3n3wkcng793hcy414x0n2hhjwak98ra9sxh36p969m26h1q"; depends=[plotly RColorBrewer]; }; visualFields = derive2 { name="visualFields"; version="0.4.3"; sha256="0ws3cz71hhhrf4xkdb644li04d31wf51xb2sq789bl2lf50q6a1a"; depends=[flip gridBase Hmisc matrixStats]; }; visualize = derive2 { name="visualize"; version="4.2"; sha256="1jgk7j0f3p72wbqnmplrgpy7hlh7k2cmvx83gr2zfnbhygdi22mk"; depends=[]; }; vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; vitality = derive2 { name="vitality"; version="1.2"; sha256="0vjbf39i7qm3857gyidg2j5hfimpydav1sx2d07n12b8q1cs8k4p"; depends=[]; }; - vmsbase = derive2 { name="vmsbase"; version="2.1"; sha256="0fz4hv08w7bpg906624d5gasd6cnqdsx9pp4194xqvsiygzl4zc4"; depends=[AMORE cairoDevice chron cluster DBI ecodist fields foreign ggmap ggplot2 gmt gsubfn gWidgets gWidgetsRGtk2 intervals mapdata maps maptools marmap outliers PBSmapping plotrix R6 RSQLite sp sqldf VennDiagram]; }; + vkR = derive2 { name="vkR"; version="0.1"; sha256="0rb66am3y009wli8ykl58i02kzm6cdqz5v5d4vvzlbngz8crdkyy"; depends=[httr jsonlite XML]; }; + vmsbase = derive2 { name="vmsbase"; version="2.1.3"; sha256="1y4r1f6miwxx3q8pajyh202wvjz08w6291jvpv723qyxa6z1r69a"; depends=[AMORE cairoDevice chron cluster DBI ecodist fields foreign ggmap ggplot2 gmt gsubfn gWidgets gWidgetsRGtk2 intervals mapdata maps maptools marmap outliers PBSmapping plotrix R6 RSQLite sp sqldf VennDiagram]; }; + vote = derive2 { name="vote"; version="1.0-0"; sha256="1fx5x5248s48n86gdclv8pjnllly89rw0l6d2is263qqndn9fsk9"; depends=[formattable knitr]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; vowels = derive2 { name="vowels"; version="1.2-1"; sha256="0177xysb5y8jzpxn9wdygq2f74gys67g29cd12zw77vlq3c3kkbr"; depends=[]; }; - vows = derive2 { name="vows"; version="0.4"; sha256="0cc0znrnzhfgp47dsyncjh7b072mbwk568n2pshxwdfxzh3kj65q"; depends=[fda gamm4 mgcv oro_nifti RLRsim rpanel shape stringr]; }; + vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; }; + voxel = derive2 { name="voxel"; version="1.2.1"; sha256="00r8diza4frwhizsjg5hfmdkikrbcg598sp09m81vg92nmjni41g"; depends=[gamm4 ggplot2 lmerTest mgcv oro_nifti]; }; vqtl = derive2 { name="vqtl"; version="1.0"; sha256="0zlli79rhcbbjkkf4kjjkscx7vk6kspma5qgywxdiyhkxiq8j2x5"; depends=[dglm dplyr evd gtools plyr qtl RColorBrewer scales stringr]; }; vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; }; vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; }; vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; - vtreat = derive2 { name="vtreat"; version="0.5.22"; sha256="0wgr7k025iylvv3l4pdwsqrblqimmgf5m7lmmb2ns0lg9m62anrp"; depends=[]; }; + vtreat = derive2 { name="vtreat"; version="0.5.30"; sha256="1i61sv47y3g9hs9bkx9wcirapy30hs66013w5k7116wqsp0dy3b2"; depends=[]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; wBoot = derive2 { name="wBoot"; version="1.0.3"; sha256="08qgkkv6jvqmxq5gvfp7jbrc3k8mxajfww7k8a3p8888aq411p7q"; depends=[boot simpleboot]; }; + wCorr = derive2 { name="wCorr"; version="1.8.0"; sha256="0s4nlkjqn85mhxynyk5k1l8yb80af728drq2v4yk0dn7v36a5mzx"; depends=[doBy minqa mnormt Rcpp RcppArmadillo]; }; wPerm = derive2 { name="wPerm"; version="1.0.1"; sha256="0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4"; depends=[]; }; wSVM = derive2 { name="wSVM"; version="0.1-7"; sha256="0c7rblzgagwfb8mmddkc0nd0f9rv6kapw8znpwapv3fv0j2qzq7h"; depends=[MASS quadprog]; }; waffect = derive2 { name="waffect"; version="1.2"; sha256="0r5dvm0ggyxyv81hxdr1an658wkqkhqq2xaqzqpnh4sh4wbak35a"; depends=[Rcpp]; }; - waffle = derive2 { name="waffle"; version="0.5.0"; sha256="0f5gw487vjpaa9rl6x9p1qxvp9rn4s8p4x58y5azalya6v4hyw6y"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; + waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; - wakefield = derive2 { name="wakefield"; version="0.2.1"; sha256="08277iwxgykxbcp1c7ys03vm0amfba7pki0ss69zl0ljv92bgsj9"; depends=[chron dplyr ggplot2 stringi]; }; - walkr = derive2 { name="walkr"; version="0.3.3"; sha256="0gyfhpar667ni5g8g0fwq4zgia3xkf5k9knhgvycq8jf554yxyl6"; depends=[ggplot2 hitandrun limSolve MASS Rcpp RcppEigen shinystan]; }; + wakefield = derive2 { name="wakefield"; version="0.3.0"; sha256="1f74503ar4hw48j13npgzybvwc631xndldidqnyfk72wb11fzi4z"; depends=[chron dplyr ggplot2 stringi]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; - warbleR = derive2 { name="warbleR"; version="1.1.0"; sha256="1zzv9s6i1884j2iybn5bwlyrnzw4ry1s9mvcpq10608nv6bg68pb"; depends=[fftw maps pbapply RCurl rjson seewave tuneR]; }; + wallace = derive2 { name="wallace"; version="0.6.3"; sha256="1kv1svckdgb8rl51qdrn3cc367gklr89fy2lw92992vmsimafxhd"; depends=[devtools dismo dplyr DT ENMeval leaflet magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyBS shinyjs shinythemes spocc spThin]; }; + wand = derive2 { name="wand"; version="0.2.0"; sha256="1p2r96nyr36jv418xi4j2ldarymb4xmpis6d2iz7mq9755kb4fnh"; depends=[dplyr purrr rappdirs Rcpp stringi tibble tidyr]; }; + warbleR = derive2 { name="warbleR"; version="1.1.5"; sha256="1m6hvvf2xji3i3fs19zf54l16wgbi7hwmjxpwfyvh9w6lb6swlnz"; depends=[doParallel dtw fftw foreach jpeg maps pbapply RCurl rjson seewave tuneR]; }; + warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; wasim = derive2 { name="wasim"; version="1.1.2"; sha256="1zydzw7cihhdwv0474fnc4lgaq5fwrv8jinz79vkbidbgcy7i2fd"; depends=[fast MASS qualV tiger]; }; - water = derive2 { name="water"; version="0.3"; sha256="1f75564l6ai69541rcdmbhq7zp1fnprif09k7fvbzapi7hy4aia3"; depends=[raster rgdal sp]; }; - waterData = derive2 { name="waterData"; version="1.0.4"; sha256="0wk49f079jfbjncyirdvq50wswf9g361iivshjfhyndv83gbqrzk"; depends=[lattice latticeExtra XML]; }; + water = derive2 { name="water"; version="0.5"; sha256="0g7h1xgij107l5n3551m3ql5m3hn79a7ajv6grk05xf507fy1bb3"; depends=[raster rgdal sp]; }; + waterData = derive2 { name="waterData"; version="1.0.6"; sha256="1k1paifhngy97ik399dndm7m5hm6r935yipiapgpchzsvl5nwwva"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; }; + waterfall = derive2 { name="waterfall"; version="1.0.2"; sha256="0jy6l9mx0dixwnkychdl18sf4xh73pm0qd1jyxp9rlnv1vcragjp"; depends=[lattice]; }; + waterfalls = derive2 { name="waterfalls"; version="0.1.1"; sha256="0x3f6phlrismivbaf37vqnz30wvz8xzj33qwl2wyg6lijxbmg551"; depends=[ggplot2]; }; waveband = derive2 { name="waveband"; version="4.6"; sha256="1y2qi2zb8l2ap6f8ihnpq2yavic464bl5mp5yv1dscbk0nmfn966"; depends=[wavethresh]; }; waved = derive2 { name="waved"; version="1.1-2"; sha256="17pr9qhz0dbbcr78vwm964d9zd7yrfrqvadr1lwf756bsrscmlg3"; depends=[]; }; wavelets = derive2 { name="wavelets"; version="0.3-0"; sha256="141s7z7wxl5plxp7xp7wczswlcvb18a4h3n881l9qc4ny9p7gfpa"; depends=[]; }; wavemulcor = derive2 { name="wavemulcor"; version="1.2"; sha256="1039y5rakjkx2mvfmykg2z4jpkpbcj7rclyg7ab19wnxmdm8ls81"; depends=[waveslim]; }; + waver = derive2 { name="waver"; version="0.2.0"; sha256="0zxhnrxc68i5jvkc0k2gk11wf0hj92slhb40qiddryx3i7m2yrli"; depends=[geosphere rgdal rgeos sp]; }; waveslim = derive2 { name="waveslim"; version="1.7.5"; sha256="0lqslkihgrd7rbihqhhk57m9vkbnfsznkvk8430cvbcsn7vridii"; depends=[]; }; - wavethresh = derive2 { name="wavethresh"; version="4.6.6"; sha256="1ykhfw1bdibvq2b3rrgqszvwqmzkd3fgxqg7p36ms1cxph68g2r9"; depends=[MASS]; }; + wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; }; wbs = derive2 { name="wbs"; version="1.3"; sha256="1fdf3dj23n63nfnzafq88sxqvi15cbrzsvc8wrljw1raq5z012yv"; depends=[]; }; + wbstats = derive2 { name="wbstats"; version="0.1.1"; sha256="18yws6zgvs773mhml5hn6aqyc2xyas10cg5jvnk4l50wir2qknxq"; depends=[httr jsonlite]; }; wbsts = derive2 { name="wbsts"; version="0.3"; sha256="1h749j20q30lrn3b4ffcap3mvxjpih1gchvv8yag0gbzcs0wc1fm"; depends=[mvtnorm wmtsa]; }; wccsom = derive2 { name="wccsom"; version="1.2.11"; sha256="0f2p7sllp3916lcf02k179pnl17fdmk8s7bjnkwb93kh513rs1yj"; depends=[class kohonen MASS]; }; + wdman = derive2 { name="wdman"; version="0.2.2"; sha256="1a6zav82w0krk0ncm5b79ahy2hc0xakg9i1m2143ih5p6zvcm5m0"; depends=[assertthat binman semver subprocess yaml]; }; weatherData = derive2 { name="weatherData"; version="0.4.1"; sha256="19ynb9w52ay15awaf4bqm9lj2w6pk70lyaipn46jrspwxqsvfhlc"; depends=[plyr]; }; - weathermetrics = derive2 { name="weathermetrics"; version="1.2.0"; sha256="1zhcgpr9r5bhg88mk13k5bskm2q4kw88dh3gphlha5j6yf2zsq6r"; depends=[]; }; + weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; }; - webchem = derive2 { name="webchem"; version="0.1.0.0"; sha256="04w827a3n91avqvnh28dmi5p13ijnmr43qx13p2z1zkr3ashqrnm"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; + webchem = derive2 { name="webchem"; version="0.1.1.1"; sha256="10h01a4slxcc6hllwh4wfayr9wfyaxijs0v875ncm97zb58gwl7h"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; webp = derive2 { name="webp"; version="0.2"; sha256="1nwb30wyff5jynn0ppmg5ybw6q2ha9smnk69fi182grm3znf85as"; depends=[]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; - webshot = derive2 { name="webshot"; version="0.3"; sha256="12gp81kr96hal8wqh6afc01g9sk36m18j00c093z15sxhgd4wgkn"; depends=[magrittr]; }; + webshot = derive2 { name="webshot"; version="0.4.0"; sha256="0qh1669lkxvr98l8sj03pfn41k4kfsy9787df4rxgigfsx3vnj1h"; depends=[jsonlite magrittr]; }; webuse = derive2 { name="webuse"; version="0.1.2"; sha256="0ks3pb9ir778j9x4l0s4ly2xa1jc9syddqm65wkck52q3lrarg3l"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="0.4"; sha256="1y8xs2kyf8g4mqpxp0kwb47cidmaqs4n3ysiy7p4s35imhzi16dc"; depends=[jsonlite]; }; webvis = derive2 { name="webvis"; version="0.0.2"; sha256="1cdn9jrpg2sbx4dsj0xf7m0daqr7fqiw3xy1lg0i0qn9cpvi348f"; depends=[]; }; - wec = derive2 { name="wec"; version="0.1"; sha256="0mg310v066k52g3isxmsgda44sys4pdl9365470z61c7dz2smy5q"; depends=[]; }; + wec = derive2 { name="wec"; version="0.4"; sha256="05mqz7784x0vl6yj79a0ii9l7jzn2s321dk0mrzq766an1s7w7hc"; depends=[dplyr]; }; + weco = derive2 { name="weco"; version="1.0"; sha256="1akn85igd6k5cfj9hzn3g8a77qzhlzwyc2p4l6y8wigyncg7wyqi"; depends=[]; }; weightTAPSPACK = derive2 { name="weightTAPSPACK"; version="0.1"; sha256="0kpfw477qka5qrc6sh73had38xbrwrqp1yv0dj2qiihkiyrp67ks"; depends=[HotDeckImputation mice plyr survey]; }; weightedScores = derive2 { name="weightedScores"; version="0.9.5.1"; sha256="118hzwaarcb8pk2zz83m6zzzndlpbbzb7gz87vc7zggpa998k1gr"; depends=[mvtnorm rootSolve]; }; + weightr = derive2 { name="weightr"; version="1.0.0"; sha256="03f6zif3a9cnshkchi5ak7s6mcsdyrqcij80aamk8cgb4s4nhc2x"; depends=[]; }; weights = derive2 { name="weights"; version="0.85"; sha256="0nsvgx2yn2ynrkqvvy3fxjsi6aw8w3zknm80fyjrih2zmxc7v61f"; depends=[gdata Hmisc mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; wellknown = derive2 { name="wellknown"; version="0.1.0"; sha256="0cin4xi1780hglmcfyjiynvh1lm90yryl1m6z1snpprfzsxx3mmg"; depends=[jsonlite magrittr]; }; wesanderson = derive2 { name="wesanderson"; version="0.3.2"; sha256="17acf9ydi2sw7q887ni9ly12mdmip66ix6gdkh68rncj8sx3csrd"; depends=[]; }; wfe = derive2 { name="wfe"; version="1.3"; sha256="16b39i60x10kw6yz44ff19h638s9lsgnz8azc76zl9b8s64jliya"; depends=[arm MASS Matrix]; }; wfg = derive2 { name="wfg"; version="0.1"; sha256="1r6wb8v42mpapjfhmkmghm9fq21c3s4zmdxy8nlh31nsja71c37d"; depends=[igraph]; }; - wgaim = derive2 { name="wgaim"; version="1.4-10"; sha256="0wf6j7f7hn2cnsb9yi28rjl7sa60zjggg62i00039b7gxcznxj1r"; depends=[lattice qtl]; }; + wfindr = derive2 { name="wfindr"; version="0.1.0"; sha256="0m5xj50hqdjj4lpbgx1kp3my4njr0nz09hd63rf4qf1ls8r7zil9"; depends=[dplyr magrittr]; }; + wgaim = derive2 { name="wgaim"; version="1.4-11"; sha256="1jjyp100dcjjczp61xlvhmy48ynniqcys535vzbgswhr7fvijymg"; depends=[lattice qtl]; }; wgsea = derive2 { name="wgsea"; version="1.8"; sha256="1114wik011sm2n12bwm2bhqvdxagbhbscif45k4pgxdkahy2abpi"; depends=[snpStats]; }; whisker = derive2 { name="whisker"; version="0.3-2"; sha256="0z4cn115gxcl086d6bnqr8afi67b6a7xqg6ivmk3l4ng1x8kcj28"; depends=[]; }; whoami = derive2 { name="whoami"; version="1.1.1"; sha256="1njyjzp9jl5k0vys0ymnvx9vbfckscg4r8hgl1nq7a2q9b9cg06f"; depends=[httr jsonlite]; }; - whoapi = derive2 { name="whoapi"; version="0.1.1"; sha256="0f4szsb30hzihwc5p48f3pi5lvdbchbkynj49drjcdhzds5hwma7"; depends=[httr]; }; + whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; }; + wicket = derive2 { name="wicket"; version="0.2.0"; sha256="0wyd72w1l84kxzfy0hhrzr6ipxgzh2gfwldlmv0h79r5icjk17z3"; depends=[BH Rcpp]; }; widals = derive2 { name="widals"; version="0.5.4"; sha256="1bl59s1r4gkvq4nkf94fk7m0zvhbrszkgmig66lfxhyvk9r84fvb"; depends=[snowfall]; }; widenet = derive2 { name="widenet"; version="0.1-2"; sha256="1nimm8szbg82vg00f5c7b3f3sk0gplssbl4ggasjnh7dl621vfny"; depends=[glmnet relaxnet]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; + wikilake = derive2 { name="wikilake"; version="0.1"; sha256="05fcdrv2splhxkr3xgp14mwn36z3sn5hjq4mjibkgh44x7av4rf8"; depends=[maps rvest selectr sp stringi stringr WikipediR xml2]; }; wikipediatrend = derive2 { name="wikipediatrend"; version="1.1.10"; sha256="10av87jlfn2lfx37bnhlpdnhg657md9jx3c3frc9a4mm4lhl7rbv"; depends=[hellno httr jsonlite rvest stringr xml2]; }; wildlifeDI = derive2 { name="wildlifeDI"; version="0.2"; sha256="0z8zyrl3d73x2j32l6xqz5nwhygzy7c9sjfp6bql5acyfvn7ngjv"; depends=[adehabitatLT rgeos sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; windex = derive2 { name="windex"; version="1.0"; sha256="0ci10x6mm5i03j05fyadxa0ic0ngpyp5nsn05p9m7v1is5jhxci0"; depends=[ape geiger scatterplot3d]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; wiod = derive2 { name="wiod"; version="0.3.0"; sha256="1f151xmc6bm5d28w5123nm0hv7j1v8hay4jk5fk8pwn6yljl1pah"; depends=[decompr gvc]; }; - withr = derive2 { name="withr"; version="1.0.1"; sha256="0zbj3rd7dc0ycknmay7y7rm1qvnh9n05jw93gjggz46j2zfmy93y"; depends=[]; }; - wkb = derive2 { name="wkb"; version="0.2-0"; sha256="04mljw7mw6cgmvzhcqw15pmqbmm61w8ylgh9f4r4k23c4qcpbmjl"; depends=[sp]; }; + wiqid = derive2 { name="wiqid"; version="0.1.0"; sha256="0vnwalknb2w6fhgbm3iqvniajy31if0rilzd16sms0qr3i1wk7xj"; depends=[coda HDInterval MASS truncnorm]; }; + withr = derive2 { name="withr"; version="1.0.2"; sha256="042z8nmqqilgrvhmbqrjc05qys3gzwq1rqy2wxp2bi5d41859493"; depends=[]; }; + wkb = derive2 { name="wkb"; version="0.3-0"; sha256="0s7libkg27jdmcw5qmk5j0cmz3nqq7ny4q8gy4vhbgsgj4gbbdn9"; depends=[sp]; }; wle = derive2 { name="wle"; version="0.9-91"; sha256="18gqwrrw618f1xx93n0lk95gpi3lxvfkr6fmlb82v2wiibb7k7ak"; depends=[circular]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; - wmtsa = derive2 { name="wmtsa"; version="2.0-0"; sha256="0y2bv166xwwpb1wf6897qybyf84f34qjsmygdbv90r637c050yk5"; depends=[ifultools MASS splus2R]; }; - wnominate = derive2 { name="wnominate"; version="0.99"; sha256="19pis0p4kkwyddn8f93p4ff7l1hvcdr7m3hrv4bzmm9nd8iy8mk1"; depends=[pscl]; }; + wmtsa = derive2 { name="wmtsa"; version="2.0-2"; sha256="14znrylyazsj3d8nxgh3nvr94ifckan6gwy12b43zsyskzqp9zbg"; depends=[ifultools MASS splus2R]; }; + wnominate = derive2 { name="wnominate"; version="1.2"; sha256="0kkdlhliihv45hc0fd25kairxd9r71hcx04ri9l0iy8cyhjs2n12"; depends=[pscl]; }; woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; }; - wordbankr = derive2 { name="wordbankr"; version="0.1"; sha256="0r2wv2vpf4xpalhpnfkyg4qznd83m8nz105xiq5dhwfx78wzvsyr"; depends=[assertthat dplyr magrittr RMySQL stringr tidyr]; }; + woeBinning = derive2 { name="woeBinning"; version="0.1.1"; sha256="00fmbz8vdvf712plm2ip0jfiq3wpj7f4l6wn3i0x0d7fggkfhm1r"; depends=[]; }; + word_alignment = derive2 { name="word.alignment"; version="1.0.4"; sha256="0riz61wib1dbm5zb087xd31vkmw73nz3g82gh59mp673ancfahpd"; depends=[data_table openxlsx quanteda]; }; + wordbankr = derive2 { name="wordbankr"; version="0.2.0"; sha256="041d5v3gm7bihx85k7kxwlqgg6vs24wzs2h59zf3l3cs39mhrhs5"; depends=[assertthat dplyr magrittr RMySQL stringr tidyr]; }; wordcloud = derive2 { name="wordcloud"; version="2.5"; sha256="1ajqdkm8h1wid3d41zd8v7xzf2swid998w31zrghd45a5lcp7qcm"; depends=[RColorBrewer Rcpp slam]; }; + wordcloud2 = derive2 { name="wordcloud2"; version="0.2.0"; sha256="0ylsmijrym61s1vhvf8csimznd1yg497xa3yign4bgi5jx4k64ny"; depends=[base64enc htmlwidgets]; }; wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-11"; sha256="0c04wda7im5jzvsb3bhql2krlpvbsv7cc5gdw3dshfqz33knyy9i"; depends=[rJava]; }; + wordspace = derive2 { name="wordspace"; version="0.2-0"; sha256="0rrnbimf68ax1qxsyn7g0kd76abijzxg5i11h93l0fnzi2g2a9xn"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; + worldmet = derive2 { name="worldmet"; version="0.7.5"; sha256="08mj3m0r9rnljlsk3x25cp4da3bdv9qc1jgy1wrd1zg5908j6dis"; depends=[dplyr leaflet openair plyr RCurl readr zoo]; }; + worrms = derive2 { name="worrms"; version="0.1.0"; sha256="0wxdn960gqqbilg2xs9jjks8z1j6rslb8qwj1s9678hw3h8ymfgx"; depends=[crul jsonlite tibble]; }; wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; }; wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; - wpp2015 = derive2 { name="wpp2015"; version="1.0-1"; sha256="1vm194b4zccg9sldsmjaf5a95zr5lrdbbg1iwby5a6w06v7g5762"; depends=[]; }; - wppExplorer = derive2 { name="wppExplorer"; version="1.7-1"; sha256="1scxvx0kl1s9yhwrynd65c73b6q3lrz9n26kxcw2zwfzb0c5i1j7"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny wpp2015]; }; - wq = derive2 { name="wq"; version="0.4.6"; sha256="1j5ghd40dzai647v44kxinqc5wx7bsc93sgxd9f3hb6h4ggfj1ka"; depends=[ggplot2 knitr reshape2 zoo]; }; + wpp2015 = derive2 { name="wpp2015"; version="1.1-0"; sha256="01vsdma2fgh0vd96ly4f704hl200v0w8ksz60gjxhm44ih3qszh3"; depends=[]; }; + wppExplorer = derive2 { name="wppExplorer"; version="2.0-2"; sha256="0mja5bgw6b0dsxi3dpm87y9qbv5b9cgp81yfjkywqc5wdjpirxk7"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2015]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; - wrassp = derive2 { name="wrassp"; version="0.1.3"; sha256="1xza4w5dgc6gda9ybmq386jnb1gkahdi6sds5dqay7pm5mjql6fl"; depends=[]; }; + wrangle = derive2 { name="wrangle"; version="0.3"; sha256="1xmb245ps02s43r0ysx87wqjdr174163x5cn4x1y226qbbdclmmk"; depends=[dplyr lazyeval magrittr tidyr]; }; + wrapr = derive2 { name="wrapr"; version="0.1.0"; sha256="1kssir24az6l39lp26g13gacmgarmhdgmc2vlpgfjv37x5lpxk3y"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="0.1.4"; sha256="0w1hzxwk00lk1hkdxxz6vqa6xzw5sf60y54xzfr510yd02x3r1gn"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; wrspathrow = derive2 { name="wrspathrow"; version="0.1"; sha256="1xkh12aal85qhk8d0pdj2qbi6pp4jnr6zbxkhdw2zwav57ly3f4i"; depends=[raster rgdal rgeos sp wrspathrowData]; }; wrspathrowData = derive2 { name="wrspathrowData"; version="1.0"; sha256="0a1aggcll0fmkwfg4h7rs4j5h3v1bh95dkbriwrb0bx0cikg63x3"; depends=[]; }; wrswoR = derive2 { name="wrswoR"; version="1.0-1"; sha256="1czw3g2j6as024wwvxiizvvxjmsxmxhz86jbw2lh95nh61znb7l8"; depends=[logging Rcpp]; }; wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.1-1"; sha256="1a2ymyf1yww43i79hc912jpyqvbx44qn5bfnjwf4hq3mp707731j"; depends=[curl lazyeval]; }; - wru = derive2 { name="wru"; version="0.0-2"; sha256="0k8dsih952jkigl1b0f1gbc475jm9926k4gx8sjnx433asda1maa"; depends=[devtools]; }; + wru = derive2 { name="wru"; version="0.1-1"; sha256="103i3a741ik61jzp5zbhf0f6lfchlafq1gyjyy98jgw0cxc6ckcv"; depends=[devtools]; }; wskm = derive2 { name="wskm"; version="1.4.28"; sha256="0d9hcriakg6fxzc8wjsahc4zkyjza31mb9dv2h4xcf8298xa96i4"; depends=[clv lattice latticeExtra]; }; - wsrf = derive2 { name="wsrf"; version="1.5.29"; sha256="1lp1yv5p2c0yq8znwzwj76gri02ip3zh0vzidlzi2fz4vh3z5ck3"; depends=[Rcpp]; }; + wsrf = derive2 { name="wsrf"; version="1.7.0"; sha256="1q4slnwn690z6ham0b2vy1rc0vkbrlj9bf0wkd6v86jag7wjr4fw"; depends=[Rcpp]; }; wtcrsk = derive2 { name="wtcrsk"; version="1.6"; sha256="048gs469rdj85sid1gfj6yhh37w7zf9xv4fj8pd48c8ww3v7f61p"; depends=[]; }; - wux = derive2 { name="wux"; version="2.2-0"; sha256="1sfx1mh4pb5xxkij5738r69cr8h32h1g6004k3s5lk6s8s0rs349"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; - x_ent = derive2 { name="x.ent"; version="1.1.2"; sha256="0wbbhsnlm5yln72h648nz3y5w83kq9qvpw0pk56lsc1bafps712p"; depends=[ggplot2 jsonlite opencpu rJava statmod stringr venneuler xtable]; }; + wtest = derive2 { name="wtest"; version="1.0"; sha256="0rn2wp4xqd1b95asc1ppscfm21p3r85za778f88kgqax2lx7kq96"; depends=[]; }; + wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; + wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; + x_ent = derive2 { name="x.ent"; version="1.1.6"; sha256="1b4skjai9rivkb86md4k8qmwqbqy8adq9c31d1jq8x04dsm3z0j7"; depends=[ggplot2 jsonlite opencpu rJava statmod stringr venneuler xtable]; }; x12 = derive2 { name="x12"; version="1.6.0"; sha256="0bl50nva4ai8p24f9hr622m0fc5nmbjakn3rsvl79g050gjsd4i3"; depends=[stringr]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; x13binary = derive2 { name="x13binary"; version="0.1.2"; sha256="1cvbqbg9bck9dlsj929wysg8frkc70p0hwpwy1rj4qwyw8czi4bs"; depends=[]; }; - xVA = derive2 { name="xVA"; version="0.8"; sha256="05hw886pdi0gqvv3x3nn4a757nfc6cc6p3z8p4lp5f72ynbrlia8"; depends=[SACCR]; }; - xergm = derive2 { name="xergm"; version="1.7.0"; sha256="04ng0mdlzc182ijn0c7ln7zscm9w4631vhzqzhfayjf3ik264nns"; depends=[btergm rem tnam xergm_common]; }; - xergm_common = derive2 { name="xergm.common"; version="1.7.1"; sha256="0l8jjz883358w704lw7rrr1z8pxk5fj78rgamsh942d0m9yp4lls"; depends=[ergm network]; }; - xgboost = derive2 { name="xgboost"; version="0.4-3"; sha256="1gq8h03hpvm2w7ninb4qpbyl9h1gvwjzcz9jnnwi0dnqknm5b26q"; depends=[data_table magrittr Matrix stringr]; }; + xLLiM = derive2 { name="xLLiM"; version="1.0"; sha256="005y3xgfac047lga3dbckkz4ba781vd7dab867515yj18q5rllp7"; depends=[abind corpcor MASS Matrix]; }; + xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; + xaringan = derive2 { name="xaringan"; version="0.2"; sha256="0nlys4gakgj73826yvzk5yy38kj7h33a3970vwls8n06fc68xksn"; depends=[htmltools knitr rmarkdown servr]; }; + xergm = derive2 { name="xergm"; version="1.7.3"; sha256="0pr6qm8q039j9c9vibm7inb5qsvl4x54djckm7087zymvriyfmvl"; depends=[btergm GERGM rem tnam xergm_common]; }; + xergm_common = derive2 { name="xergm.common"; version="1.7.4"; sha256="1mrd5sa6bwv5lw6q0q9xj6zacs41522r69bm1ijd14gx5k1gwn7s"; depends=[ergm network]; }; + xgboost = derive2 { name="xgboost"; version="0.6-4"; sha256="1vfiz44prcjx2y442zc4x1b50k57qwd7sqbz6lq0kiqhp78ivicz"; depends=[data_table magrittr Matrix stringi]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; xhmmScripts = derive2 { name="xhmmScripts"; version="1.1"; sha256="1qryyb34jx9c64l8bnwp40b08y81agdj5w0icj8dk052x50ip1hl"; depends=[gplots plotrix]; }; xkcd = derive2 { name="xkcd"; version="0.0.5"; sha256="1cq4n7w4adj24qq658z15jkqvrn4pd5abxpcsdkzb2cq98m69iis"; depends=[extrafont ggplot2 Hmisc]; }; + xkcdcolors = derive2 { name="xkcdcolors"; version="1.0"; sha256="07fnjv01r3b951dqca2zs9b9f6hsgbpbpsrggvb8rps53kpid0i7"; depends=[FNN]; }; xlsx = derive2 { name="xlsx"; version="0.5.7"; sha256="0qxkdpf1dvi0x7fy65abjx2j60rdx7fv5yi8l2wdm0f2631pnwin"; depends=[rJava xlsxjars]; }; xlsxjars = derive2 { name="xlsxjars"; version="0.6.1"; sha256="1rka5smm7yqnhhlblpihhciydfap4i6kjaa4a7isdg7qjmzm3h9p"; depends=[rJava]; }; - xmeta = derive2 { name="xmeta"; version="1.0-2"; sha256="0b6swqlhiyhkwh5d0rvn1r9bslhnxx34yfw37l1m0bx9cndcalkz"; depends=[aod glmmML metafor mvmeta numDeriv]; }; - xml2 = derive2 { name="xml2"; version="0.1.2"; sha256="0jjilz36h7vbdbkpvjnja1vgjf6d1imql3z4glqn2m2b74w5qm4c"; depends=[BH Rcpp]; }; + xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; + xmeta = derive2 { name="xmeta"; version="1.1-3"; sha256="18m28zf4rg0czxagqp2f0c36qkan7s17414vkrknc6s1xja44gaq"; depends=[aod glmmML metafor mvmeta numDeriv]; }; + xml2 = derive2 { name="xml2"; version="1.1.1"; sha256="05iifrcgzx53w5ciw8bbm4vdwc3giv4xsvazv8chqxkndfvf7wq0"; depends=[BH Rcpp]; }; + xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.1"; sha256="0q9d4l3p4ypc0qswnjwrd3as9bx9f1niixsc19y1msva51sg5h39"; depends=[]; }; xoi = derive2 { name="xoi"; version="0.66-9"; sha256="1kd9s9afq5shsaqhrxai9yz60a9imyy5np76fjpkjgyz56kbk6nr"; depends=[qtl]; }; xpose4 = derive2 { name="xpose4"; version="4.5.3"; sha256="02m3ad4287ljsi4qrzwd84lfj1y6rz9nias2zk4cbqm14gf19pdf"; depends=[gam Hmisc lattice survival]; }; xseq = derive2 { name="xseq"; version="0.2.1"; sha256="0bsakbfvkfv39q2ch2g21b17g84470sq4v73355cljlshsi6404i"; depends=[e1071 gptk impute preprocessCore RColorBrewer sfsmisc]; }; + xslt = derive2 { name="xslt"; version="1.0"; sha256="0qsllagbib1a5ahxsk4s1fib4lyw45axi2c2d187mnpzpsy3pzfn"; depends=[Rcpp xml2]; }; xtable = derive2 { name="xtable"; version="1.8-2"; sha256="0398qkpvlw3dv0myz4mjcyqwpwc2m31l127r8vdzwc71wb6s28qn"; depends=[]; }; xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; }; xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; + xtractomatic = derive2 { name="xtractomatic"; version="3.2.0"; sha256="04gng8y7606fvyj767f9vja33fh0xcwj2v2jy3nacybjwwr9yrx0"; depends=[httr ncdf4 sp]; }; xts = derive2 { name="xts"; version="0.9-7"; sha256="163hzcnxrdb4lbsnwwv7qa00h4qlg4jm289acgvbg4jbiywpq7zi"; depends=[zoo]; }; + xxIRT = derive2 { name="xxIRT"; version="2.0.0"; sha256="140dp3chsd9mlnbysachck3547zgcpsbrgqhnrdxp348pny0l94b"; depends=[ggplot2 lpSolveAPI reshape2 shiny]; }; + xyloplot = derive2 { name="xyloplot"; version="1.3"; sha256="1pgxsmghpy9am1smdfc0d8hi2l9gb15ssfpf4z84cc2chhaghc7w"; depends=[]; }; + xyz = derive2 { name="xyz"; version="0.1"; sha256="0hynmrbi1f0ijv2g0va8bnr84ls2d8prl32f76mmfq6a3laqrj9i"; depends=[Rcpp]; }; yCrypticRNAs = derive2 { name="yCrypticRNAs"; version="0.99.2"; sha256="130zp8na3d50b49bcsqzsmjy2sif865h6vfpc5zmp1fhvkyykkfd"; depends=[biomaRt data_table IRanges mclust MESS Rcpp Rsamtools]; }; yaImpute = derive2 { name="yaImpute"; version="1.0-26"; sha256="00w127wnwnhkfkrn4764l1ap3d3njlidglk9izcxm0n4kqj0zb49"; depends=[]; }; yacca = derive2 { name="yacca"; version="1.1"; sha256="0wg2wgvh1najmccmgzyigj11mshrdb8w4r2pqq360dracpn0ak6x"; depends=[]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; - yaml = derive2 { name="yaml"; version="2.1.13"; sha256="18kz5mfn7qpif5pn91w4vbrc5bkycsj85vwm5wxwzjlb02i9mxi6"; depends=[]; }; + yaml = derive2 { name="yaml"; version="2.1.14"; sha256="0x88xicrf7vwp77xgan27mnpdljhpkn0pz5kphnwqi3ddy25k9a1"; depends=[]; }; + yarrr = derive2 { name="yarrr"; version="0.1.4"; sha256="171z69jgva1afzmcjk62g9mr18z9r955rizvsp46bcljj74vfq39"; depends=[BayesFactor jpeg]; }; ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; }; + yesno = derive2 { name="yesno"; version="0.0.2"; sha256="0aa8kqcqlix9a9a2l4fnl2qv25dgdn4m7cfsh7m0kk76y8q5gbc9"; depends=[]; }; yhat = derive2 { name="yhat"; version="2.0-0"; sha256="0vdhkknmms7zy7iha894jn1hr1h5w67pr53r0q67m7p404w21iza"; depends=[boot miscTools plotrix yacca]; }; - yhatr = derive2 { name="yhatr"; version="0.13.10"; sha256="1hlab1x44xld634ha36y66znfpl3a8v77281c07i954d9sqm893p"; depends=[httr jsonlite rjson stringr]; }; + yhatr = derive2 { name="yhatr"; version="0.15.0"; sha256="0irgc26ds8fs8lwgghkhzrvx9drx338vxsphwia4wspd2i0yyzsk"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; - yuima = derive2 { name="yuima"; version="1.0.81"; sha256="171ma8j8x7adwfiixihjp6bwg7w5xij38fvmkazsxd39aw7gkz7z"; depends=[cubature expm mvtnorm zoo]; }; + yorkr = derive2 { name="yorkr"; version="0.0.7"; sha256="035pmvignq4lip3y5670kxj1n70ff04yy2jwi4837pimr9d0qjhv"; depends=[dplyr ggplot2 gridExtra reshape2 rpart_plot yaml]; }; + yuima = derive2 { name="yuima"; version="1.5.9"; sha256="04s96zkyccb2nkgzh07jxa8lpyrvzigyiynis2ifiql12yw5c960"; depends=[cubature expm mvtnorm Rcpp zoo]; }; + yuimaGUI = derive2 { name="yuimaGUI"; version="1.0.0"; sha256="12mr9icngrrghn0j1dpyx2njr7sn9zc5nm3imrqq3qxz7wv45fg8"; depends=[DT ggplot2 quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; - zCompositions = derive2 { name="zCompositions"; version="1.0.3"; sha256="0lxy201ys9dvv8c09q8wbks1c2jkjyd1bbrxhjr7zi9j7m0parl7"; depends=[MASS NADA truncnorm]; }; + zCompositions = derive2 { name="zCompositions"; version="1.0.3-1"; sha256="1408bb5nfipsxskgpjzixnxndg7hf48nq27k0pwrcxx16wykmlcy"; depends=[MASS NADA truncnorm]; }; + zTree = derive2 { name="zTree"; version="1.0.4"; sha256="058vjvxn1lw07nxw8rs1b8vnw6ccxh3swrmvjicvr35xmakj8qa0"; depends=[plyr]; }; + zeallot = derive2 { name="zeallot"; version="0.0.2"; sha256="0rksacqasiq9xxxmkdqi5c844xhbnda6f6hr8mz37vg9zxqzfbdj"; depends=[]; }; + zebu = derive2 { name="zebu"; version="0.1.0"; sha256="1s9lm90yhyhflikvrwpbx94gysc7wazpi4v3vh3fibiyna0a9sgj"; depends=[ggplot2 pbapply plyr reshape2]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; - zetadiv = derive2 { name="zetadiv"; version="0.1"; sha256="1p9mxy70mgqxjn7szh44217nvhjh90237kp5znli1r01ch64mx6b"; depends=[car mgcv vegan]; }; + zenplots = derive2 { name="zenplots"; version="0.0-1"; sha256="0agm81rrn4ip6sljrwm1a9i2q9rwdwamnxm0smz757kypgyll8c2"; depends=[graph MASS PairViz]; }; + zetadiv = derive2 { name="zetadiv"; version="1.0"; sha256="1r33v97viqq6r3afszclq45rcm4sfxy86lk13ljr6bxns47xpfii"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zic = derive2 { name="zic"; version="0.9"; sha256="0i39983blc46vjbb4y36rypg9q3zammxahk63p089m43gi22ycxh"; depends=[coda Rcpp RcppArmadillo]; }; zipcode = derive2 { name="zipcode"; version="1.0"; sha256="1lvlf1h5fv412idpdssjfh4fki933dm5nhr41ppl1mf45b9j7azn"; depends=[]; }; zipfR = derive2 { name="zipfR"; version="0.6-6"; sha256="1y3nqfjg5m89mdvcmqwjmwlc8p3hpcqnwv4ji1a7ggg4n63lwl3j"; depends=[]; }; + ziphsmm = derive2 { name="ziphsmm"; version="1.0.3"; sha256="0x7l4sgbixlz6x28gm3sk7x65n3p8jcm5ck3i10vy49f1fsvkf80"; depends=[Rcpp RcppArmadillo]; }; zoeppritz = derive2 { name="zoeppritz"; version="1.0-5"; sha256="0a501411gjs02vvhxdy8z3a5449arkamdidf2q6qswkkiv68qq04"; depends=[]; }; - zoib = derive2 { name="zoib"; version="1.3.3"; sha256="0j183jyx9qirdyg03rpv6q30rxbb68cs6g2qpi53arpfk2v9f445"; depends=[abind coda Formula matrixcalc rjags]; }; - zoo = derive2 { name="zoo"; version="1.7-12"; sha256="1n64pdmk2vrmiprwkncaaf936c97nlc1l78bvmzp991rijr9vqg5"; depends=[lattice]; }; + zoib = derive2 { name="zoib"; version="1.4.2"; sha256="0gdbcnxlm9m88c2av4zy0k3yvm2cvg24804xnsi0mwfgwmnngdh5"; depends=[abind coda Formula matrixcalc rjags]; }; + zoo = derive2 { name="zoo"; version="1.7-14"; sha256="167m142rwwfy8b9hnfc3fi28dcsdjk61g1crqhll6sh5xmgnfn28"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; + zoocat = derive2 { name="zoocat"; version="0.2.0"; sha256="1xqi90jnpqjdf3zr4pldh1a2gjppjwjrgkq71rvdhmcrf5s8jav0"; depends=[plyr reshape2 scales zoo]; }; zooimage = derive2 { name="zooimage"; version="3.0-5"; sha256="1r3slmyw0dyqfa40dr5xga814z09ibhmmby8p1cii5lh61xm4c39"; depends=[filehash jpeg mlearning png svDialogs svMisc]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; - zoon = derive2 { name="zoon"; version="0.4.23"; sha256="0y8jmlqfdnf5j7dzcz2y4dspxlzl6nvsa9ly97myg461ypicm8sc"; depends=[dismo raster RCurl rfigshare]; }; + zoon = derive2 { name="zoon"; version="0.6"; sha256="0dyl8fnzjncxb9q322xsdmvbm0wwzl1w9750vmvndpd8c05qi1n0"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 SDMTools sp testthat]; }; ztable = derive2 { name="ztable"; version="0.1.5"; sha256="1jfqnqy9544gfvz3bsb48v4177nwp4b4n9l2743asq8sbq305b5r"; depends=[]; }; + ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; zyp = derive2 { name="zyp"; version="0.10-1"; sha256="0f1fqqxysf3psnvn08s5qly2c958h1hhznjjj8mvpjr5g6hqlr1k"; depends=[Kendall]; }; } diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 49273e34c7e..494cffb86f7 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -245,7 +245,6 @@ let BiocCheck = [ pkgs.which ]; Biostrings = [ pkgs.zlib ]; bnpmr = [ pkgs.gsl_1 ]; - BNSP = [ pkgs.gsl_1 ]; cairoDevice = [ pkgs.gtk2.dev ]; Cairo = [ pkgs.libtiff pkgs.libjpeg pkgs.cairo.dev pkgs.x11 pkgs.fontconfig.lib ]; Cardinal = [ pkgs.which ]; @@ -642,7 +641,6 @@ let "rsgcc" "RSurvey" "RunuranGUI" - "sdcMicroGUI" "sharpshootR" "simba" "Simile" @@ -766,7 +764,6 @@ let "Metab" # broken build "Crossover" # broken build "CardinalWorkflows" # broken build - "spoccutils" # depends on broken package spocc "mapr" # depends on broken package spocc "vmsbase" # broken build "vcfR" # broken build @@ -833,7 +830,6 @@ let "SQDA" # depends on broken package limma "ADaCGH2" # depends on broken package limma "snapCGH" # depends on broken package limma - "Shrinkage" # depends on broken package limma "SafeQuant" # depends on broken package limma "RTopper" # depends on broken package limma "RTCGAToolbox" # depends on broken package limma @@ -875,7 +871,6 @@ let "stepNorm" # depends on broken package limma "RBM" # depends on broken package limma "saps" # depends on broken package limma - "PharmacoGx" # depends on broken package limma "piano" # depends on broken package limma "OLINgui" # depends on broken package limma "OLIN" # depends on broken package limma @@ -993,7 +988,6 @@ let "clippda" # depends on broken package limma "REDseq" # depends on broken package limma "GUIDEseq" # depends on broken package limma - "ggtut" # depends on broken package limma "FunciSNP" # depends on broken package limma "ChIPpeakAnno" # depends on broken package limma "ChIPComp" # depends on broken package limma @@ -1161,7 +1155,6 @@ let "tadaatoolbox" # depends on broken package car "lavaan_shiny" # depends on broken package car "RcmdrPlugin_GWRM" # depends on broken package car - "TextoMineR" # depends on broken package car "pcaBootPlot" # depends on broken package car "ClustGeo" # depends on broken package car "preproviz" # depends on broken package car @@ -1278,7 +1271,6 @@ let "daff" # depends on broken package V8 "dagbag" # build is broken "DAMisc" # depends on broken package nlopt - "datafsm" # depends on broken package caret "dbConnect" # broken build "DBKGrad" # depends on broken package rpanel #"dcmle" # broken build @@ -1367,7 +1359,6 @@ let "gmatrix" # depends on broken package cudatoolkit "gMCP" # build is broken "gmum_r" # broken build - "Goslate" # depends on broken package PythonInR "GPC" # broken build "gplm" # depends on broken package nlopt "gpuR" # depends on GPU-specific header files @@ -1687,7 +1678,6 @@ let "sampleSelection" # depends on broken package nlopt "sapFinder" # depends on broken package rTANDEM "sdcMicro" # depends on broken package nlopt - "sdcMicroGUI" # depends on broken package nlopt "SDD" # depends on broken package rpanel "seeg" # depends on broken package nlopt "Sejong" # broken build @@ -1723,7 +1713,6 @@ let "specmine" # depends on broken package caret "splm" # depends on broken package car "spocc" # depends on broken package V8 - "spoccutils" # depends on broken spocc "ssmrob" # depends on broken package nlopt "StatMethRank" # broken build "stepp" # depends on broken package nlopt @@ -1734,7 +1723,6 @@ let "systemfit" # depends on broken package nlopt "TcGSA" # depends on broken package nlopt "TDMR" # depends on broken package nlopt - "TextoMineR" # depends on broken package FactoMineR "TFBSTools" # depends on broken package DirichletMultinomial "tigerstats" # depends on broken package nlopt "TLBC" # depends on broken package caret diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R index 4d6a69b27aa..9aec419c0f8 100755 --- a/pkgs/development/r-modules/generate-r-packages.R +++ b/pkgs/development/r-modules/generate-r-packages.R @@ -4,7 +4,7 @@ library(parallel) cl <- makeCluster(10) rVersion <- paste(R.Version()$major, strsplit(R.Version()$minor, ".", fixed=TRUE)[[1]][1], sep=".") -snapshotDate <- Sys.Date() +snapshotDate <- Sys.Date()-1 mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/bioc/src/contrib/") , "bioc-annotation"=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", rVersion, "/data/annotation/src/contrib/") @@ -45,16 +45,20 @@ nixPrefetch <- function(name, version) { } formatPackage <- function(name, version, sha256, depends, imports, linkingTo) { + name <- ifelse(name == "import", "r_import", name) attr <- gsub(".", "_", name, fixed=TRUE) + options(warn=5) depends <- paste( if (is.na(depends)) "" else gsub("[ \t\n]+", "", depends) , if (is.na(imports)) "" else gsub("[ \t\n]+", "", imports) , if (is.na(linkingTo)) "" else gsub("[ \t\n]+", "", linkingTo) , sep="," ) depends <- unlist(strsplit(depends, split=",", fixed=TRUE)) - depends <- sapply(depends, gsub, pattern="([^ \t\n(]+).*", replacement="\\1") - depends <- sapply(depends, gsub, pattern=".", replacement="_", fixed=TRUE) + depends <- lapply(depends, gsub, pattern="([^ \t\n(]+).*", replacement="\\1") + depends <- lapply(depends, gsub, pattern=".", replacement="_", fixed=TRUE) depends <- depends[depends %in% knownPackages] + depends <- lapply(depends, function(d) ifelse(d == "import", "r_import", d)) + depends <- paste(depends) depends <- paste(sort(unique(depends)), collapse=" ") paste0(" ", attr, " = derive2 { name=\"", name, "\"; version=\"", version, "\"; sha256=\"", sha256, "\"; depends=[", depends, "]; };") } From 4c2d75f58c8e0133e8148ea1191e52f70d88dc4d Mon Sep 17 00:00:00 2001 From: Justin Bedo Date: Fri, 24 Feb 2017 15:52:10 +1100 Subject: [PATCH 031/216] R: unmark edgeR and limma as broken --- pkgs/development/r-modules/default.nix | 268 ------------------------- 1 file changed, 268 deletions(-) diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 494cffb86f7..24b1a8df123 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -801,272 +801,6 @@ let "AnthropMMD" # depends on broken package euroMix "ilc" # depends on broken package demography "demography" # broken build - "webbioc" # depends on broken package limma - "davidTiling" # depends on broken package limma - "tilingArray" # depends on broken package limma - "NAPPA" # depends on broken package limma - "NanoStringNorm" # depends on broken package limma - "synapterdata" # depends on broken package limma - "synapter" # depends on broken package limma - "RforProteomics" # depends on broken package limma - "pRolocdata" # depends on broken package limma - "ProCoNA" # depends on broken package limma - "Pbase" # depends on broken package limma - "MSnID" # depends on broken package limma - "msmsEDA" # depends on broken package limma - "MSnbase" # depends on broken package limma - "staRank" # depends on broken package limma - "phenoDist" # depends on broken package limma - "imageHTS" # depends on broken package limma - "Mulder2012" # depends on broken package limma - "HTSanalyzeR" # depends on broken package limma - "gespeR" # depends on broken package limma - "cellHTS2" # depends on broken package limma - "affyPara" # depends on broken package limma - "vsn" # depends on broken package limma - "ttScreening" # depends on broken package limma - "metaX" # depends on broken package limma - "SSPA" # depends on broken package limma - "SQDA" # depends on broken package limma - "ADaCGH2" # depends on broken package limma - "snapCGH" # depends on broken package limma - "SafeQuant" # depends on broken package limma - "RTopper" # depends on broken package limma - "RTCGAToolbox" # depends on broken package limma - "RPPanalyzer" # depends on broken package limma - "Rnits" # depends on broken package limma - "RNAinteractMAPK" # depends on broken package limma - "RNAinteract" # depends on broken package limma - "SimBindProfiles" # depends on broken package limma - "ccTutorial" # depends on broken package limma - "Ringo" # depends on broken package limma - "rCGH" # depends on broken package limma - "qusage" # depends on broken package limma - "qpcrNorm" # depends on broken package limma - "prot2D" # depends on broken package limma - "polyester" # depends on broken package limma - "plmDE" # depends on broken package limma - "phenoTest" # depends on broken package limma - "RANKS" # depends on broken package limma - "PerfMeas" # depends on broken package limma - "pepStat" # depends on broken package limma - "PECA" # depends on broken package limma - "PADOG" # depends on broken package limma - "OGSA" # depends on broken package limma - "nethet" # depends on broken package limma - "lpNet" # depends on broken package limma - "nem" # depends on broken package limma - "monocle" # depends on broken package limma - "MmPalateMiRNA" # depends on broken package limma - "miRtest" # depends on broken package limma - "miRLAB" # depends on broken package limma - "mGSZ" # depends on broken package limma - "MAMA" # depends on broken package limma - "metaMA" # depends on broken package limma - "msd16s" # depends on broken package limma - "metagenomeSeq" # depends on broken package limma - "metabolomics" # depends on broken package limma - "maSigPro" # depends on broken package limma - "timecourse" # depends on broken package limma - "stepNorm" # depends on broken package limma - "RBM" # depends on broken package limma - "saps" # depends on broken package limma - "piano" # depends on broken package limma - "OLINgui" # depends on broken package limma - "OLIN" # depends on broken package limma - "nnNorm" # depends on broken package limma - "ListerEtAlBSseq" # depends on broken package limma - "compEpiTools" # depends on broken package limma - "methylPipe" # depends on broken package limma - "dyebiasexamples" # depends on broken package limma - "dyebias" # depends on broken package limma - "CluMix" # depends on broken package limma - "HCsnip" # depends on broken package limma - "sigaR" # depends on broken package limma - "plrs" # depends on broken package limma - "CGHregions" # depends on broken package limma - "QDNAseq_mm10" # depends on broken package limma - "QDNAseq_hg19" # depends on broken package limma - "QDNAseq" # depends on broken package limma - "GeneBreak" # depends on broken package limma - "focalCall" # depends on broken package limma - "CGHnormaliter" # depends on broken package limma - "CGHcall" # depends on broken package limma - "CGHbase" # depends on broken package limma - "beta7" # depends on broken package limma - "marray" # depends on broken package limma - "LVSmiRNA" # depends on broken package limma - "lmdme" # depends on broken package limma - "limmaGUI" # depends on broken package limma - "InPAS" # depends on broken package limma - "iChip" # depends on broken package limma - "unifiedWMWqPCR" # depends on broken package limma - "nondetects" # depends on broken package limma - "HTqPCR" # depends on broken package limma - "HD2013SGI" # depends on broken package limma - "vtpnet" # depends on broken package limma - "gwascat" # depends on broken package limma - "gQTLstats" # depends on broken package limma - "GOsummaries" # depends on broken package limma - "yri1kgv" # depends on broken package limma - "hmyriB36" # depends on broken package limma - "cheung2010" # depends on broken package limma - "GGtools" # depends on broken package limma - "GGdata" # depends on broken package limma - "encoDnaseI" # depends on broken package limma - "dsQTL" # depends on broken package limma - "ceuhm3" # depends on broken package limma - "ceu1kgv" # depends on broken package limma - "ceu1kg" # depends on broken package limma - "GGBase" # depends on broken package limma - "GeneSelector" # depends on broken package limma - "GeneSelectMMD" # depends on broken package limma - "gCMAPWeb" # depends on broken package limma - "gCMAP" # depends on broken package limma - "flowBin" # depends on broken package limma - "Fletcher2013a" # depends on broken package limma - "FEM" # depends on broken package limma - "explorase" # depends on broken package limma - "ExiMiR" # depends on broken package limma - "tweeDEseq" # depends on broken package limma - "tRanslatome" # depends on broken package limma - "ToPASeq" # depends on broken package limma - "timeSeq" # depends on broken package limma - "TCGAbiolinks" # depends on broken package limma - "TCC" # depends on broken package limma - "systemPipeR" # depends on broken package limma - "STATegRa" # depends on broken package limma - "ssizeRNA" # depends on broken package limma - "RUVSeq" # depends on broken package limma - "RnaSeqSampleSizeData" # depends on broken package limma - "RnaSeqSampleSize" # depends on broken package limma - "rnaSeqMap" # depends on broken package limma - "ReportingTools" # depends on broken package limma - "QuasiSeq" # depends on broken package limma - "PROPER" # depends on broken package limma - "myTAI" # depends on broken package limma - "msmsTests" # depends on broken package limma - "methylMnM" # depends on broken package limma - "metaseqR" # depends on broken package limma - "MEDIPS" # depends on broken package limma - "manta" # depends on broken package limma - "HTSFilter" # depends on broken package limma - "HTSCluster" # depends on broken package limma - "GSAgm" # depends on broken package limma - "fdrDiscreteNull" # depends on broken package limma - "erccdashboard" # depends on broken package limma - "EnrichmentBrowser" # depends on broken package limma - "edgeRun" # depends on broken package limma - "EDDA" # depends on broken package limma - "RnaSeqTutorial" # depends on broken package limma - "easyRNASeq" # depends on broken package limma - "DEGreport" # depends on broken package limma - "Imetagene" # depends on broken package limma - "metagene" # depends on broken package limma - "DBChIP" # depends on broken package limma - "babel" # depends on broken package limma - "apmsWAPP" # depends on broken package limma - "ampliQueso" # depends on broken package limma - "edgeR" # depends on broken package limma - "MMDiff" # depends on broken package limma - "ChIPQC" # depends on broken package limma - "DiffBind" # depends on broken package limma - "DCGL" # depends on broken package limma - "Prostar" # depends on broken package limma - "DAPAR" # depends on broken package limma - "DAAGbio" # depends on broken package limma - "csaw" # depends on broken package limma - "cp4p" # depends on broken package limma - "coRNAi" # depends on broken package limma - "Cormotif" # depends on broken package limma - "CORM" # depends on broken package limma - "TurboNorm" # depends on broken package limma - "maigesPack" # depends on broken package limma - "convert" # depends on broken package limma - "compcodeR" # depends on broken package limma - "codelink" # depends on broken package limma - "clippda" # depends on broken package limma - "REDseq" # depends on broken package limma - "GUIDEseq" # depends on broken package limma - "FunciSNP" # depends on broken package limma - "ChIPpeakAnno" # depends on broken package limma - "ChIPComp" # depends on broken package limma - "ChimpHumanBrainData" # depends on broken package limma - "charmData" # depends on broken package limma - "charm" # depends on broken package limma - "cghMCR" # depends on broken package limma - "CCl4" # depends on broken package limma - "casper" # depends on broken package limma - "CancerMutationAnalysis" # depends on broken package limma - "CALIB" # depends on broken package limma - "quantro" # depends on broken package limma - "RnBeads" # depends on broken package limma - "mvoutData" # depends on broken package limma - "MineICA" # depends on broken package limma - "methyAnalysis" # depends on broken package limma - "MAQCsubsetILM" # depends on broken package limma - "MAQCsubset" # depends on broken package limma - "lumiRatIDMapping" # depends on broken package limma - "lumiMouseIDMapping" # depends on broken package limma - "lumiHumanIDMapping" # depends on broken package limma - "lumiBarnes" # depends on broken package limma - "iCheck" # depends on broken package limma - "ffpeExampleData" # depends on broken package limma - "arrayMvout" # depends on broken package limma - "lumi" # depends on broken package limma - "ffpe" # depends on broken package limma - "methylumi" # depends on broken package limma - "shinyMethyl" # depends on broken package limma - "MethylAidData" # depends on broken package limma - "MethylAid" # depends on broken package limma - "IlluminaHumanMethylation450kmanifest" # depends on broken package limma - "skewr" # depends on broken package limma - "wateRmelon" # depends on broken package limma - "missMethyl" # depends on broken package limma - "minfiData" # depends on broken package limma - "IlluminaHumanMethylation450kanno_ilmn12_hg19" # depends on broken package limma - "IlluminaHumanMethylation27kmanifest" # depends on broken package limma - "FlowSorted_DLPFC_450k" # depends on broken package limma - "FlowSorted_Blood_450k" # depends on broken package limma - "ENmix" # depends on broken package limma - "ELMER" # depends on broken package limma - "MEAL" # depends on broken package limma - "DMRcate" # depends on broken package limma - "CopyNumber450kData" # depends on broken package limma - "CopyNumber450k" # depends on broken package limma - "conumee" # depends on broken package limma - "ChAMP" # depends on broken package limma - "minfi" # depends on broken package limma - "regionReport" # depends on broken package limma - "derfinderPlot" # depends on broken package limma - "derfinder" # depends on broken package limma - "bumphunter" # depends on broken package limma - "birta" # depends on broken package limma - "betr" # depends on broken package limma - "beadarrayMSV" # depends on broken package limma - "RobLoxBioC" # depends on broken package limma - "maGUI" # depends on broken package limma - "epigenomix" # depends on broken package limma - "blima" # depends on broken package limma - "BeadArrayUseCases" # depends on broken package limma - "beadarrayFilter" # depends on broken package limma - "beadarrayExampleData" # depends on broken package limma - "beadarray" # depends on broken package limma - "ballgown" # depends on broken package limma - "attract" # depends on broken package limma - "ArrayTools" # depends on broken package limma - "arrayQuality" # depends on broken package limma - "DrugVsDisease" # depends on broken package limma - "ArrayExpress" # depends on broken package limma - "oneChannelGUI" # depends on broken package limma - "affylmGUI" # depends on broken package limma - "AffyExpress" # depends on broken package limma - "AgiMicroRna" # depends on broken package limma - "affycoretools" # depends on broken package limma - "ABSSeq" # depends on broken package limma - "a4" # depends on broken package limma - "a4Base" # depends on broken package limma - "limma" # broken build "TransView" # broken build "Starr" # broken build "SICtools" # broken build @@ -1285,7 +1019,6 @@ let "DEGraph" # depends on broken package RCytoscape "destiny" # depends on broken package VIM "DiagTest3Grp" # depends on broken package nlopt - "diffHic" # depends on broken package edgeR "difR" # depends on broken package nlopt "DirichletMultinomial" # Build Is Broken "DistatisR" # depends on broken package nlopt @@ -1300,7 +1033,6 @@ let "easyanova" # depends on broken package nlopt "ecd" # depends on broken package polynom "edge" # depends on broken package nlopt - "edgeR" # broken url "eeptools" # depends on broken package nlopt "EffectLiteR" # depends on broken package nlopt "effects" # depends on broken package nlopt From 1fe6ed53925f316752f78638e4d0c920a5909295 Mon Sep 17 00:00:00 2001 From: Michiel Leenaars Date: Fri, 24 Feb 2017 10:12:24 +0100 Subject: [PATCH 032/216] hexio: unstable -> 1.0-RC1 --- pkgs/development/tools/hexio/default.nix | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/pkgs/development/tools/hexio/default.nix b/pkgs/development/tools/hexio/default.nix index 6d75c7256ee..7078e2a3727 100644 --- a/pkgs/development/tools/hexio/default.nix +++ b/pkgs/development/tools/hexio/default.nix @@ -1,18 +1,19 @@ -{ stdenv, fetchFromGitHub, fetchurl, python, pcsclite, pth, glibc }: +{ stdenv, fetchFromGitHub, fetchurl, python, pcsclite, pth }: stdenv.mkDerivation rec { pname = "hexio"; name = "${pname}-${version}"; - version = "201605"; + version = "1.0-RC1"; src = fetchFromGitHub { sha256 = "08jxkdi0gjsi8s793f9kdlad0a58a0xpsaayrsnpn9bpmm5cgihq"; - rev = "f6f963bd0fcd2808977e0ad82dcb3100691cdd7c"; + rev = "version-${version}"; owner = "vanrein"; repo = "hexio"; }; - buildInputs = [ python pcsclite pth glibc ]; + propagatedBuildInputs = [ python ]; + buildInputs = [ pcsclite pth ]; patchPhase = '' substituteInPlace Makefile \ From dec7ecbbbcc5f68ab8c96d39ba3c62eaf0326242 Mon Sep 17 00:00:00 2001 From: Antoine Eiche Date: Fri, 24 Feb 2017 22:17:52 +0100 Subject: [PATCH 033/216] nova-image: refactoring The nova image configuration is separated from the image build. --- .../scripts/openstack/nova-image.nix | 24 +++++++ nixos/modules/virtualisation/nova-config.nix | 51 +++++++++++++++ nixos/modules/virtualisation/nova-image.nix | 65 ------------------- 3 files changed, 75 insertions(+), 65 deletions(-) create mode 100644 nixos/maintainers/scripts/openstack/nova-image.nix create mode 100644 nixos/modules/virtualisation/nova-config.nix delete mode 100644 nixos/modules/virtualisation/nova-image.nix diff --git a/nixos/maintainers/scripts/openstack/nova-image.nix b/nixos/maintainers/scripts/openstack/nova-image.nix new file mode 100644 index 00000000000..fa9cfb74bd6 --- /dev/null +++ b/nixos/maintainers/scripts/openstack/nova-image.nix @@ -0,0 +1,24 @@ +{ config, lib, pkgs, ... }: + +with lib; + +{ + imports = + [ ../../../modules/installer/cd-dvd/channel.nix + ../../../modules/virtualisation/nova-config.nix + ]; + + system.build.novaImage = import ../../../lib/make-disk-image.nix { + inherit lib config; + pkgs = import ../../../.. { inherit (pkgs) system; }; # ensure we use the regular qemu-kvm package + diskSize = 8192; + format = "qcow2"; + configFile = pkgs.writeText "configuration.nix" + '' + { + imports = [ ]; + } + ''; + }; + +} diff --git a/nixos/modules/virtualisation/nova-config.nix b/nixos/modules/virtualisation/nova-config.nix new file mode 100644 index 00000000000..6bcc05d3c1e --- /dev/null +++ b/nixos/modules/virtualisation/nova-config.nix @@ -0,0 +1,51 @@ +{ config, lib, pkgs, ... }: + +with lib; + +{ + imports = [ + ../profiles/qemu-guest.nix + ../profiles/headless.nix + ]; + + config = { + fileSystems."/".device = "/dev/disk/by-label/nixos"; + + boot.kernelParams = [ "console=ttyS0" ]; + boot.loader.grub.device = "/dev/vda"; + boot.loader.timeout = 0; + + # Allow root logins + services.openssh.enable = true; + services.openssh.permitRootLogin = "prohibit-password"; + + # Put /tmp and /var on /ephemeral0, which has a lot more space. + # Unfortunately we can't do this with the `fileSystems' option + # because it has no support for creating the source of a bind + # mount. Also, "move" /nix to /ephemeral0 by layering a unionfs-fuse + # mount on top of it so we have a lot more space for Nix operations. + + /* + boot.initrd.postMountCommands = + '' + mkdir -m 1777 -p $targetRoot/ephemeral0/tmp + mkdir -m 1777 -p $targetRoot/tmp + mount --bind $targetRoot/ephemeral0/tmp $targetRoot/tmp + + mkdir -m 755 -p $targetRoot/ephemeral0/var + mkdir -m 755 -p $targetRoot/var + mount --bind $targetRoot/ephemeral0/var $targetRoot/var + + mkdir -p /unionfs-chroot/ro-nix + mount --rbind $targetRoot/nix /unionfs-chroot/ro-nix + + mkdir -p /unionfs-chroot/rw-nix + mkdir -m 755 -p $targetRoot/ephemeral0/nix + mount --rbind $targetRoot/ephemeral0/nix /unionfs-chroot/rw-nix + unionfs -o allow_other,cow,nonempty,chroot=/unionfs-chroot,max_files=32768 /rw-nix=RW:/ro-nix=RO $targetRoot/nix + ''; + + boot.initrd.supportedFilesystems = [ "unionfs-fuse" ]; + */ + }; +} diff --git a/nixos/modules/virtualisation/nova-image.nix b/nixos/modules/virtualisation/nova-image.nix deleted file mode 100644 index e253c77ebb4..00000000000 --- a/nixos/modules/virtualisation/nova-image.nix +++ /dev/null @@ -1,65 +0,0 @@ -# Usage: -# $ NIXOS_CONFIG=`pwd`/nixos/modules/virtualisation/nova-image.nix nix-build '' -A config.system.build.novaImage - -{ config, lib, pkgs, ... }: - -with lib; - -{ - system.build.novaImage = import ../../lib/make-disk-image.nix { - inherit pkgs lib config; - partitioned = true; - diskSize = 1 * 1024; - configFile = pkgs.writeText "configuration.nix" - '' - { - imports = [ ]; - } - ''; - }; - - imports = [ - ../profiles/qemu-guest.nix - ../profiles/headless.nix - ]; - - fileSystems."/".device = "/dev/disk/by-label/nixos"; - - boot.kernelParams = [ "console=ttyS0" ]; - boot.loader.grub.device = "/dev/vda"; - boot.loader.timeout = 0; - - # Allow root logins - services.openssh.enable = true; - services.openssh.permitRootLogin = "prohibit-password"; - - # Put /tmp and /var on /ephemeral0, which has a lot more space. - # Unfortunately we can't do this with the `fileSystems' option - # because it has no support for creating the source of a bind - # mount. Also, "move" /nix to /ephemeral0 by layering a unionfs-fuse - # mount on top of it so we have a lot more space for Nix operations. - - /* - boot.initrd.postMountCommands = - '' - mkdir -m 1777 -p $targetRoot/ephemeral0/tmp - mkdir -m 1777 -p $targetRoot/tmp - mount --bind $targetRoot/ephemeral0/tmp $targetRoot/tmp - - mkdir -m 755 -p $targetRoot/ephemeral0/var - mkdir -m 755 -p $targetRoot/var - mount --bind $targetRoot/ephemeral0/var $targetRoot/var - - mkdir -p /unionfs-chroot/ro-nix - mount --rbind $targetRoot/nix /unionfs-chroot/ro-nix - - mkdir -p /unionfs-chroot/rw-nix - mkdir -m 755 -p $targetRoot/ephemeral0/nix - mount --rbind $targetRoot/ephemeral0/nix /unionfs-chroot/rw-nix - unionfs -o allow_other,cow,nonempty,chroot=/unionfs-chroot,max_files=32768 /rw-nix=RW:/ro-nix=RO $targetRoot/nix - ''; - - boot.initrd.supportedFilesystems = [ "unionfs-fuse" ]; - */ - -} From 386c19a224b12c3ed0c6150c5a1d39dd69cdc532 Mon Sep 17 00:00:00 2001 From: Antoine Eiche Date: Fri, 24 Feb 2017 22:19:53 +0100 Subject: [PATCH 034/216] nova-image: support partition resizing --- nixos/modules/virtualisation/nova-config.nix | 8 +++++++- 1 file changed, 7 insertions(+), 1 deletion(-) diff --git a/nixos/modules/virtualisation/nova-config.nix b/nixos/modules/virtualisation/nova-config.nix index 6bcc05d3c1e..aac11ec8a17 100644 --- a/nixos/modules/virtualisation/nova-config.nix +++ b/nixos/modules/virtualisation/nova-config.nix @@ -6,10 +6,16 @@ with lib; imports = [ ../profiles/qemu-guest.nix ../profiles/headless.nix + ./grow-partition.nix ]; config = { - fileSystems."/".device = "/dev/disk/by-label/nixos"; + fileSystems."/" = { + device = "/dev/disk/by-label/nixos"; + autoResize = true; + }; + + virtualisation.growPartition = true; boot.kernelParams = [ "console=ttyS0" ]; boot.loader.grub.device = "/dev/vda"; From 19e65c4c46d1464488fe1fab6265803ba279d5d5 Mon Sep 17 00:00:00 2001 From: mingchuan Date: Wed, 22 Feb 2017 21:39:29 +0800 Subject: [PATCH 035/216] crystal: 0.20.5 -> 0.21.0 --- pkgs/development/compilers/crystal/default.nix | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/pkgs/development/compilers/crystal/default.nix b/pkgs/development/compilers/crystal/default.nix index 6202a8e968b..b8cbceb9767 100644 --- a/pkgs/development/compilers/crystal/default.nix +++ b/pkgs/development/compilers/crystal/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, boehmgc, libatomic_ops, pcre, libevent, libiconv, llvm_39, makeWrapper }: stdenv.mkDerivation rec { - version = "0.20.5"; + version = "0.21.0"; name = "crystal-${version}-1"; arch = { @@ -14,15 +14,15 @@ stdenv.mkDerivation rec { url = "https://github.com/crystal-lang/crystal/releases/download/${version}/crystal-${version}-1-${arch}.tar.gz"; sha256 = { - "x86_64-linux" = "fd077c0a727419e131b1be6198a5aa5820ecbdaafd2d2bb38be5716ba75b5100"; - "i686-linux" = "e3a890f11833c57c9004655d108f981c7c630cd7a939f828d9a6c571705bc3e7"; - "x86_64-darwin" = "79462c8ff994b36cff219c356967844a17e8cb2817bb24a196a960a08b8c9e47"; + "x86_64-linux" = "0a44539df3813baea4381c314ad5f782b13cf1596e478851c52cd84193cc7a1f"; + "i686-linux" = "9a45287f94d329f5ebe77f5a0d71cd0e09c3db79b0b56f6fe4a5166beed707ef"; + "x86_64-darwin" = "e92abb33a9a592febb4e629ad68375b2577acd791a71220b8dc407904be469ee"; }."${stdenv.system}" or (throw "system ${stdenv.system} not supported"); }; src = fetchurl { url = "https://github.com/crystal-lang/crystal/archive/${version}.tar.gz"; - sha256 = "ee1e5948c6e662ccb1e62671cf2c91458775b559b23d74ab226dc2a2d23f7707"; + sha256 = "4dd01703f5304a0eda7f02fc362fba27ba069666097c0f921f8a3ee58808779c"; }; # crystal on Darwin needs libiconv to build From 1aaf2be2a022f7cc2dcced364b8725da544f6ff7 Mon Sep 17 00:00:00 2001 From: Christoph Hrdinka Date: Sat, 25 Feb 2017 16:14:35 +0100 Subject: [PATCH 036/216] retroarch: libretro-mednafen-* -> libretro-beetle-* Rename all mednafen-* libretro ports to beetle-* due #23163. Closes #23163. Signed-off-by: Christoph Hrdinka --- pkgs/misc/emulators/retroarch/cores.nix | 75 +++++++++++++------------ pkgs/top-level/all-packages.nix | 14 ++++- 2 files changed, 50 insertions(+), 39 deletions(-) diff --git a/pkgs/misc/emulators/retroarch/cores.nix b/pkgs/misc/emulators/retroarch/cores.nix index 50f73d6f4e6..8d02fbfc9bd 100644 --- a/pkgs/misc/emulators/retroarch/cores.nix +++ b/pkgs/misc/emulators/retroarch/cores.nix @@ -62,6 +62,45 @@ in buildPhase = "make"; }; + beetle-pce-fast = (mkLibRetroCore rec { + core = "mednafen-pce-fast"; + src = fetchRetro { + repo = "beetle-pce-fast-libretro"; + rev = "6e2eaf75da2eb3dfcf2fd64413f471c8c90cf885"; + sha256 = "0m946108wzawg0c4xvqpv6yzfmjngz6lji5hn4swgk0z5f2bj5a5"; + }; + description = "Port of Mednafen's PC Engine core to libretro"; + }).override { + buildPhase = "make"; + name = "beetle-pce-fast"; + }; + + beetle-psx = (mkLibRetroCore rec { + core = "mednafen-psx"; + src = fetchRetro { + repo = "beetle-psx-libretro"; + rev = "20c9b0eb0062b8768cc40aca0e2b2d626f1002a2"; + sha256 = "192xzvdbjjqlxrnxxn45hmrr6yjpxw3gapkbax6nhrabnxhva43k"; + }; + description = "Port of Mednafen's PSX Engine core to libretro"; + }).override { + buildPhase = "make"; + name = "beetle-psx"; + }; + + beetle-saturn = (mkLibRetroCore rec { + core = "mednafen-saturn"; + src = fetchRetro { + repo = "beetle-saturn-libretro"; + rev = "bb5d0c126feb25cf980f5cc1fc57d6a5a6f6e7ab"; + sha256 = "0bnsdy27378b71y6aa65k4jxxy2xw6ky2ici3z53hkky2jnnjq0b"; + }; + description = "Port of Mednafen's Saturn core to libretro"; + }).override { + buildPhase = "make"; + name = "beetle-saturn"; + }; + bsnes-mercury = let bname = "bsnes-mercury"; in (mkLibRetroCore rec { core = bname + "-accuracy"; src = fetchRetro { @@ -146,42 +185,6 @@ in extraBuildInputs = [ alsaLib portaudio python27 ]; }; - mednafen-pce-fast = (mkLibRetroCore rec { - core = "mednafen-pce-fast"; - src = fetchRetro { - repo = "beetle-pce-fast-libretro"; - rev = "6e2eaf75da2eb3dfcf2fd64413f471c8c90cf885"; - sha256 = "0m946108wzawg0c4xvqpv6yzfmjngz6lji5hn4swgk0z5f2bj5a5"; - }; - description = "Port of Mednafen's PC Engine core to libretro"; - }).override { - buildPhase = "make"; - }; - - mednafen-psx = (mkLibRetroCore rec { - core = "mednafen-psx"; - src = fetchRetro { - repo = "beetle-psx-libretro"; - rev = "20c9b0eb0062b8768cc40aca0e2b2d626f1002a2"; - sha256 = "192xzvdbjjqlxrnxxn45hmrr6yjpxw3gapkbax6nhrabnxhva43k"; - }; - description = "Port of Mednafen's PSX Engine core to libretro"; - }).override { - buildPhase = "make"; - }; - - mednafen-saturn = (mkLibRetroCore rec { - core = "mednafen-saturn"; - src = fetchRetro { - repo = "beetle-saturn-libretro"; - rev = "bb5d0c126feb25cf980f5cc1fc57d6a5a6f6e7ab"; - sha256 = "0bnsdy27378b71y6aa65k4jxxy2xw6ky2ici3z53hkky2jnnjq0b"; - }; - description = "Port of Mednafen's Saturn core to libretro"; - }).override { - buildPhase = "make"; - }; - mgba = mkLibRetroCore rec { core = "mgba"; src = fetchRetro { diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 2ca20f74b26..186cc7dddd5 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -15719,6 +15719,9 @@ with pkgs; in with libretro; ([ ] ++ optional (cfg.enable4do or false) _4do + ++ optional (cfg.enableBeetlePCEFast or false) beetle-pce-fast + ++ optional (cfg.enableBeetlePSX or false) beetle-psx + ++ optional (cfg.enableBeetleSaturn or false) beetle-saturn ++ optional (cfg.enableBsnesMercury or false) bsnes-mercury ++ optional (cfg.enableDesmume or false) desmume ++ optional (cfg.enableFBA or false) fba @@ -15726,9 +15729,6 @@ with pkgs; ++ optional (cfg.enableGambatte or false) gambatte ++ optional (cfg.enableGenesisPlusGX or false) genesis-plus-gx ++ optional (cfg.enableMAME or false) mame - ++ optional (cfg.enableMednafenPCEFast or false) mednafen-pce-fast - ++ optional (cfg.enableMednafenPSX or false) mednafen-psx - ++ optional (cfg.enableMednafenSaturn or false) mednafen-saturn ++ optional (cfg.enableMGBA or false) mgba ++ optional (cfg.enableMupen64Plus or false) mupen64plus ++ optional (cfg.enableNestopia or false) nestopia @@ -15743,6 +15743,14 @@ with pkgs; ++ optional (cfg.enableStella or false) stella ++ optional (cfg.enableVbaNext or false) vba-next ++ optional (cfg.enableVbaM or false) vba-m + + # added on 2017-02-25 due #23163 + ++ optional (cfg.enableMednafenPCEFast or false) + (throw "nix config option enableMednafenPCEFast has been renamed to enableBeetlePCEFast") + ++ optional (cfg.enableMednafenPSX or false) + (throw "nix config option enableMednafenPSX has been renamed to enableBeetlePSX") + ++ optional (cfg.enableMednafenSaturn or false) + (throw "nix config option enableMednafenSaturn has been renamed to enableBeetleSaturn") ); wrapRetroArch = { retroarch }: callPackage ../misc/emulators/retroarch/wrapper.nix { From 5af221e6f33cc2fd727d7936750b8693b35d4484 Mon Sep 17 00:00:00 2001 From: Daiderd Jordan Date: Sat, 25 Feb 2017 20:25:51 +0100 Subject: [PATCH 037/216] opusfile: enable on darwin --- pkgs/applications/audio/opusfile/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/applications/audio/opusfile/default.nix b/pkgs/applications/audio/opusfile/default.nix index f840ba278cf..8a7ab8889a6 100644 --- a/pkgs/applications/audio/opusfile/default.nix +++ b/pkgs/applications/audio/opusfile/default.nix @@ -13,11 +13,11 @@ stdenv.mkDerivation rec { patches = [ ./include-multistream.patch ]; configureFlags = [ "--disable-examples" ]; - meta = { + meta = with stdenv.lib; { description = "High-level API for decoding and seeking in .opus files"; homepage = http://www.opus-codec.org/; - license = stdenv.lib.licenses.bsd3; - platforms = stdenv.lib.platforms.linux; - maintainers = with stdenv.lib.maintainers; [ fuuzetsu ]; + license = licenses.bsd3; + platforms = platforms.linux ++ platforms.darwin; + maintainers = with maintainers; [ fuuzetsu ]; }; } From bbc9b1ab2c92c7d695ac70068ac8bbf433790a36 Mon Sep 17 00:00:00 2001 From: Daiderd Jordan Date: Sat, 25 Feb 2017 21:34:54 +0100 Subject: [PATCH 038/216] mpv: disable drmSupport on darwin --- pkgs/applications/video/mpv/default.nix | 9 ++++----- 1 file changed, 4 insertions(+), 5 deletions(-) diff --git a/pkgs/applications/video/mpv/default.nix b/pkgs/applications/video/mpv/default.nix index 960dabd7569..021c09a47e6 100644 --- a/pkgs/applications/video/mpv/default.nix +++ b/pkgs/applications/video/mpv/default.nix @@ -31,7 +31,7 @@ , libpngSupport ? true, libpng ? null , youtubeSupport ? true, youtube-dl ? null , vaapiSupport ? true, libva ? null -, drmSupport ? true, libdrm ? null +, drmSupport ? !stdenv.isDarwin, libdrm ? null , vapoursynthSupport ? false, vapoursynth ? null , jackaudioSupport ? false, libjack2 ? null @@ -114,7 +114,9 @@ in stdenv.mkDerivation rec { buildInputs = [ ffmpeg_3_2 freetype libass libpthreadstubs lua lua5_sockets libuchardet - ] ++ optional alsaSupport alsaLib + ] ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ + libiconv Cocoa CoreAudio ]) + ++ optional alsaSupport alsaLib ++ optional xvSupport libXv ++ optional theoraSupport libtheora ++ optional xineramaSupport libXinerama @@ -122,9 +124,6 @@ in stdenv.mkDerivation rec { ++ optional bluraySupport libbluray ++ optional jackaudioSupport libjack2 ++ optional pulseSupport libpulseaudio - ++ optional stdenv.isDarwin libiconv - ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ - Cocoa CoreAudio ]) ++ optional rubberbandSupport rubberband ++ optional screenSaverSupport libXScrnSaver ++ optional vdpauSupport libvdpau From 7e97cbe5a4cc9f89dd2060eb8791bc7bf032ac29 Mon Sep 17 00:00:00 2001 From: Michael Weiss Date: Sat, 25 Feb 2017 22:15:45 +0100 Subject: [PATCH 039/216] version: Extend /etc/os-release - Provide additional link for support and bug reporting. - Use HTTPS links (related: "The IAB encourages all web servers to employ TLS to protect their content, and use OCSP stapling to improve the efficiency and privacy of revocation checking." [0]. - Add VERSION_CODENAME [0]: https://www.iab.org/documents/correspondence-reports-documents/2017-2/iab-statement-on-ocsp-stapling/ --- nixos/modules/misc/version.nix | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/nixos/modules/misc/version.nix b/nixos/modules/misc/version.nix index 70cd3fb9766..bf20e801f61 100644 --- a/nixos/modules/misc/version.nix +++ b/nixos/modules/misc/version.nix @@ -106,9 +106,12 @@ in NAME=NixOS ID=nixos VERSION="${config.system.nixosVersion} (${config.system.nixosCodeName})" + VERSION_CODENAME=${toLower config.system.nixosCodeName} VERSION_ID="${config.system.nixosVersion}" PRETTY_NAME="NixOS ${config.system.nixosVersion} (${config.system.nixosCodeName})" - HOME_URL="http://nixos.org/" + HOME_URL="https://nixos.org/" + SUPPORT_URL="https://nixos.org/nixos/support.html" + BUG_REPORT_URL="https://github.com/NixOS/nixpkgs/issues" ''; }; From e798f573f07bfb4b88973496e2292558c3c7b405 Mon Sep 17 00:00:00 2001 From: Dan Peebles Date: Sun, 26 Feb 2017 02:02:22 +0000 Subject: [PATCH 040/216] make-disk-image.nix: set last fsck time on ext4 images to enable resize-on-startup --- nixos/lib/make-disk-image.nix | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/nixos/lib/make-disk-image.nix b/nixos/lib/make-disk-image.nix index d9d76b5919a..8c5de22f30f 100644 --- a/nixos/lib/make-disk-image.nix +++ b/nixos/lib/make-disk-image.nix @@ -145,9 +145,11 @@ pkgs.vmTools.runInLinuxVM ( umount /mnt - # Make sure resize2fs works + # Make sure resize2fs works. Note that resize2fs has stricter criteria for resizing than a normal + # mount, so the `-c 0` and `-i 0` don't affect it. Setting it to `now` doesn't produce deterministic + # output, of course, but we can fix that when/if we start making images deterministic. ${optionalString (fsType == "ext4") '' - tune2fs -c 0 -i 0 $rootDisk + tune2fs -T now -c 0 -i 0 $rootDisk ''} '' ) From cc647804f10aedc2a61ce344ab8bf336f55fdd27 Mon Sep 17 00:00:00 2001 From: Gabriel Ebner Date: Sun, 26 Feb 2017 08:50:15 +0100 Subject: [PATCH 041/216] lean: 3.0.0 -> 3.1.0 --- pkgs/applications/science/logic/lean/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/applications/science/logic/lean/default.nix b/pkgs/applications/science/logic/lean/default.nix index b6de57951ca..a863b01f43a 100644 --- a/pkgs/applications/science/logic/lean/default.nix +++ b/pkgs/applications/science/logic/lean/default.nix @@ -1,17 +1,17 @@ -{ stdenv, fetchFromGitHub, cmake, gmp, mpfr, gperftools }: +{ stdenv, fetchFromGitHub, cmake, gmp }: stdenv.mkDerivation rec { name = "lean-${version}"; - version = "3.0.0"; + version = "3.1.0"; src = fetchFromGitHub { owner = "leanprover"; repo = "lean"; rev = "v${version}"; - sha256 = "1ds25213vir8llans7na3laqs8rgr06clgp9xzq8akiwfy87b74i"; + sha256 = "0w4cdai6mzx4wr7gscv4sl5q4mxx1agjbpp4smvrslav7gpbz025"; }; - buildInputs = [ gmp mpfr cmake gperftools ]; + buildInputs = [ gmp cmake ]; enableParallelBuilding = true; preConfigure = '' From e55b829c6925421f732d30d622da4af0681a56ba Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Vladim=C3=ADr=20=C4=8Cun=C3=A1t?= Date: Sun, 26 Feb 2017 09:35:38 +0100 Subject: [PATCH 042/216] llvmPackages: mark 4.0 as lowPrio For example, "nix-env -i clang" should not install the RC version. /cc #22970. --- pkgs/top-level/all-packages.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 95a19240a0a..31f898fb922 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -4730,7 +4730,7 @@ with pkgs; clang = llvmPackages.clang; - clang_40 = llvmPackages_40.clang; + clang_40 = lowPrio llvmPackages_40.clang; clang_39 = llvmPackages_39.clang; clang_38 = llvmPackages_38.clang; clang_37 = llvmPackages_37.clang; @@ -5278,13 +5278,13 @@ with pkgs; lizardfs = callPackage ../tools/filesystems/lizardfs { }; - lld = llvmPackages_40.lld; + lld = lowPrio llvmPackages_40.lld; lldb = llvmPackages.lldb; llvm = llvmPackages.llvm; - llvm_40 = llvmPackages_40.llvm; + llvm_40 = lowPrio llvmPackages_40.llvm; llvm_39 = llvmPackages_39.llvm; llvm_38 = llvmPackages_38.llvm; llvm_37 = llvmPackages_37.llvm; From bfe1d74eb83ff2fca1db158d0e08b404bc9a60e6 Mon Sep 17 00:00:00 2001 From: Matthias Beyer Date: Sun, 26 Feb 2017 09:43:39 +0100 Subject: [PATCH 043/216] mwic: init at 0.7.2 (#23183) * mwic: init at 0.7.2 * mwic: use makefile instead --- pkgs/applications/misc/mwic/default.nix | 31 +++++++++++++++++++++++++ pkgs/top-level/all-packages.nix | 4 ++++ 2 files changed, 35 insertions(+) create mode 100644 pkgs/applications/misc/mwic/default.nix diff --git a/pkgs/applications/misc/mwic/default.nix b/pkgs/applications/misc/mwic/default.nix new file mode 100644 index 00000000000..7b9b04c66c8 --- /dev/null +++ b/pkgs/applications/misc/mwic/default.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchurl, pythonPackages }: + +stdenv.mkDerivation rec { + version = "0.7.2"; + name = "mwic-${version}"; + + src = fetchurl { + url = "https://github.com/jwilk/mwic/releases/download/${version}/${name}.tar.gz"; + sha256 = "1linpagf0i0ggicq02fcvz4rpx7xdpy80ys49wx7fnmz7f3jc6jy"; + }; + + makeFlags=["PREFIX=\${out}"]; + + nativeBuildInputs = [ + pythonPackages.wrapPython + ]; + + propagatedBuildInputs = with pythonPackages; [ pyenchant regex ]; + + postFixup = '' + buildPythonPath "$out" + ''; + + meta = with stdenv.lib; { + homepage = http://jwilk.net/software/mwic; + description = "spell-checker that groups possible misspellings and shows them in their contexts"; + license = licenses.mit; + maintainers = with maintainers; [ matthiasbeyer ]; + }; +} + diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 110d22d345c..e9113258695 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -14449,6 +14449,10 @@ with pkgs; withSidebar = true; }; + mwic = callPackage ../applications/misc/mwic { + pythonPackages = python3Packages; + }; + neomutt = callPackage ../applications/networking/mailreaders/neomutt { }; natron = callPackage ../applications/video/natron { }; From f8cb022feb1dbb19318ad86adbace1d54804dfef Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:27:06 +0100 Subject: [PATCH 044/216] build-support/vm: replace sha256 with sha1 --- pkgs/build-support/vm/default.nix | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix index 562344dfcf7..19a3f24a470 100644 --- a/pkgs/build-support/vm/default.nix +++ b/pkgs/build-support/vm/default.nix @@ -866,7 +866,7 @@ rec { fullName = "Fedora 10 (i386)"; packagesList = fetchurl { url = mirror://fedora/linux/releases/10/Everything/i386/os/repodata/beeea88d162e76993c25b9dd8139868274ee7fa1-primary.xml.gz; - sha1 = "beeea88d162e76993c25b9dd8139868274ee7fa1"; + sha256 = "17lyvzqjsxw3ll7726dpg14f9jc2p3fz5cr5cwd8hp3rkm5nfclv"; }; urlPrefix = mirror://fedora/linux/releases/10/Everything/i386/os; packages = commonFedoraPackages ++ [ "cronie" "util-linux-ng" ]; @@ -877,7 +877,7 @@ rec { fullName = "Fedora 10 (x86_64)"; packagesList = fetchurl { url = mirror://fedora/linux/releases/10/Everything/x86_64/os/repodata/7958210175e86b5cc843cf4bd0bc8659e445e261-primary.xml.gz; - sha1 = "7958210175e86b5cc843cf4bd0bc8659e445e261"; + sha256 = "02pzqmb26zmmzdni11dip3bar4kr54ddsrq9z4vda7ldwwkqd3py"; }; urlPrefix = mirror://fedora/linux/releases/10/Everything/x86_64/os; archs = ["noarch" "x86_64"]; @@ -1325,7 +1325,7 @@ rec { fullName = "Ubuntu 7.10 Gutsy (i386)"; packagesList = fetchurl { url = mirror://ubuntu/dists/gutsy/main/binary-i386/Packages.bz2; - sha1 = "8b52ee3d417700e2b2ee951517fa25a8792cabfd"; + sha256 = "0fmac8svxq86a4w878g6syczvy5ff4jrdc1gajd3xd8z0dypnw27"; }; urlPrefix = mirror://ubuntu; packages = commonDebianPackages; @@ -1336,7 +1336,7 @@ rec { fullName = "Ubuntu 8.04 Hardy (i386)"; packagesList = fetchurl { url = mirror://ubuntu/dists/hardy/main/binary-i386/Packages.bz2; - sha1 = "db74581ee75cb3bee2a8ae62364e97956c723259"; + sha256 = "19132nc9fhdfmgmvn834lk0d8c0n3jv0ndz9inyynh9k6pc8b5hd"; }; urlPrefix = mirror://ubuntu; packages = commonDebianPackages; @@ -1347,7 +1347,7 @@ rec { fullName = "Ubuntu 8.04 Hardy (amd64)"; packagesList = fetchurl { url = mirror://ubuntu/dists/hardy/main/binary-amd64/Packages.bz2; - sha1 = "d1f1d2b3cc62533d6e4337f2696a5d27235d1f28"; + sha256 = "1xjcgh0ydixmim7kgxss0mhfw0sibpgygvgsyac4bdz9m503sj3h"; }; urlPrefix = mirror://ubuntu; packages = commonDebianPackages; @@ -1411,7 +1411,7 @@ rec { ubuntu910x86_64 = { name = "ubuntu-9.10-karmic-amd64"; fullName = "Ubuntu 9.10 Karmic (amd64)"; - packagesList = fetchurl { + packagesList = fetchurl { url = mirror://ubuntu/dists/karmic/main/binary-amd64/Packages.bz2; sha256 = "3a604fcb0c135eeb8b95da3e90a8fd4cfeff519b858cd3c9e62ea808cb9fec40"; }; From 4c11d5fe831106f5ed6f1b93802d6b1f22ff5c62 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:30:03 +0100 Subject: [PATCH 045/216] dtrx: replace sha1 with sha256 --- pkgs/tools/compression/dtrx/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/tools/compression/dtrx/default.nix b/pkgs/tools/compression/dtrx/default.nix index 4e3f7d3d0db..5198cb15a60 100644 --- a/pkgs/tools/compression/dtrx/default.nix +++ b/pkgs/tools/compression/dtrx/default.nix @@ -17,7 +17,7 @@ in pythonPackages.buildPythonApplication rec { src = fetchurl { url = "http://brettcsmith.org/2007/dtrx/dtrx-${version}.tar.gz"; - sha1 = "05cfe705a04a8b84571b0a5647cd2648720791a4"; + sha256 = "15yf4n27zbhvv0byfv3i89wl5zn6jc2wbc69lk5a3m6rx54gx6hw"; }; postInstall = '' From fc2a42b40e431d7104e34ea85e2c246abe627a11 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:31:01 +0100 Subject: [PATCH 046/216] zsync: replace sha1 with sha256 --- pkgs/tools/compression/zsync/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/tools/compression/zsync/default.nix b/pkgs/tools/compression/zsync/default.nix index 4606d5bf79b..89016b3ff40 100644 --- a/pkgs/tools/compression/zsync/default.nix +++ b/pkgs/tools/compression/zsync/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://zsync.moria.org.uk/download/${name}.tar.bz2"; - sha1 = "5e69f084c8adaad6a677b68f7388ae0f9507617a"; + sha256 = "1wjslvfy76szf0mgg2i9y9q30858xyjn6v2acc24zal76d1m778b"; }; meta = { From def0c868eaf7c969968a77b53b637a220662a410 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:37:27 +0100 Subject: [PATCH 047/216] pythonPackages: remove sha1 comment --- pkgs/top-level/python-packages.nix | 1 - 1 file changed, 1 deletion(-) diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 5862289a227..3561a93a2b6 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -28879,7 +28879,6 @@ EOF src = pkgs.fetchurl { url = "https://gdata-python-client.googlecode.com/files/${name}.tar.gz"; - # sha1 = "d2d9f60699611f95dd8c328691a2555e76191c0c"; sha256 = "1dpxl5hwyyqd71avpm5vkvw8fhlvf9liizmhrq9jphhrx0nx5rsn"; }; From 7f5cfd3ec5b7ee5efd894b86a2b82c2ae1744435 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:36:39 +0100 Subject: [PATCH 048/216] samplicator: 1.3.7-beta6 -> 1.3.8rc1 --- pkgs/tools/networking/samplicator/default.nix | 16 ++++++++++------ 1 file changed, 10 insertions(+), 6 deletions(-) diff --git a/pkgs/tools/networking/samplicator/default.nix b/pkgs/tools/networking/samplicator/default.nix index 3daea665929..1b537870b09 100644 --- a/pkgs/tools/networking/samplicator/default.nix +++ b/pkgs/tools/networking/samplicator/default.nix @@ -1,17 +1,21 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchFromGitHub, autoreconfHook }: stdenv.mkDerivation rec { name = "samplicator-${version}"; - version = "1.3.7-beta6"; + version = "1.3.8rc1"; - src = fetchurl { - url = "http://samplicator.googlecode.com/files/${name}.tar.gz"; - sha1 = "2091af1898d6508ad9fd338a07e352e2387522d4"; + buildInputs = [ autoreconfHook ]; + + src = fetchFromGitHub { + owner = "sleinen"; + repo = "samplicator"; + rev = version; + sha256 = "0fv5vldmwd6qrdv2wkk946dk9rn9nrv3c84ldvvqqn1spxfzgirm"; }; meta = { description = "Send copies of (UDP) datagrams to multiple receivers"; - homepage = "http://code.google.com/p/samplicator/"; + homepage = https://github.com/sleinen/samplicator/; license = stdenv.lib.licenses.gpl2Plus; platforms = stdenv.lib.platforms.unix; }; From f4c253ff2f68fbe3e302f944e8347233d9dc8c9d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sat, 25 Feb 2017 00:28:47 +0100 Subject: [PATCH 049/216] jfsutils: replace sha1 with sha256 --- pkgs/tools/filesystems/jfsutils/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/tools/filesystems/jfsutils/default.nix b/pkgs/tools/filesystems/jfsutils/default.nix index 16d95bd1933..244f3e294a8 100644 --- a/pkgs/tools/filesystems/jfsutils/default.nix +++ b/pkgs/tools/filesystems/jfsutils/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://jfs.sourceforge.net/project/pub/${name}.tar.gz"; - sha1 = "291e8bd9d615cf3d27e4000117c81a3602484a50"; + sha256 = "0kbsy2sk1jv4m82rxyl25gwrlkzvl3hzdga9gshkxkhm83v1aji4"; }; patches = [ ./types.patch ./hardening-format.patch ]; From d66aec8237438ecb0aa57a3e0910e844a0f28fa1 Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Sun, 26 Feb 2017 00:58:45 +0100 Subject: [PATCH 050/216] zam-plugins: 3.7 -> 3.8 --- pkgs/applications/audio/zam-plugins/default.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/applications/audio/zam-plugins/default.nix b/pkgs/applications/audio/zam-plugins/default.nix index b79083ee402..ecb7d9bceec 100644 --- a/pkgs/applications/audio/zam-plugins/default.nix +++ b/pkgs/applications/audio/zam-plugins/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "zam-plugins-${version}"; - version = "3.7"; + version = "3.8"; src = fetchgit { url = "https://github.com/zamaudio/zam-plugins.git"; deepClone = true; - rev = "932046905a57f698406318765a60807a1f81257d"; - sha256 = "0zgkmq3jgysrsb6cm6sfbgqpgfpwv8nxlgkqm29zzvb97j56bm7z"; + rev = "830ab2e9dd1db8cf56d12c71057157e5d8e9fd74"; + sha256 = "1hyly5inis59cvh0r7lyi203h8v5jh84ca9jpaljm53cvw6d93px"; }; buildInputs = [ boost libX11 mesa liblo libjack2 ladspaH lv2 pkgconfig rubberband libsndfile ]; From 8bdeca0c15b69626328bfe97545841be50bc5f21 Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Sat, 25 Feb 2017 21:53:11 +0100 Subject: [PATCH 051/216] x42-plugins: 20160825 -> 20161230 --- pkgs/applications/audio/x42-plugins/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/applications/audio/x42-plugins/default.nix b/pkgs/applications/audio/x42-plugins/default.nix index 64ffeced13d..69288880cb2 100644 --- a/pkgs/applications/audio/x42-plugins/default.nix +++ b/pkgs/applications/audio/x42-plugins/default.nix @@ -3,12 +3,12 @@ , mesa_glu, lv2, mesa, gtk2, cairo, pango, fftwFloat, zita-convolver }: stdenv.mkDerivation rec { - version = "20160825"; + version = "20161230"; name = "x42-plugins-${version}"; src = fetchurl { url = "http://gareus.org/misc/x42-plugins/${name}.tar.xz"; - sha256 = "13ln5ccmrrc07ykfp040389av60dlgqz1kh6vfjkga6sq7z51msr"; + sha256 = "1yni9c17kl2pi9lqxip07b6g6lyfii1pch5czp183113gk54fwj5"; }; buildInputs = [ mesa_glu ftgl freefont_ttf libjack2 libltc libsndfile libsamplerate lv2 mesa gtk2 cairo pango fftwFloat pkgconfig zita-convolver]; From 6992824ec107f555326b08b3db8e667c317bd700 Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Sun, 26 Feb 2017 00:59:38 +0100 Subject: [PATCH 052/216] jack2-unstable: 2016-08-18 -> 2017-02-23 --- pkgs/misc/jackaudio/unstable.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/misc/jackaudio/unstable.nix b/pkgs/misc/jackaudio/unstable.nix index deda40e7cba..a2026dacc93 100644 --- a/pkgs/misc/jackaudio/unstable.nix +++ b/pkgs/misc/jackaudio/unstable.nix @@ -24,13 +24,13 @@ let in stdenv.mkDerivation rec { name = "${prefix}jack2-unstable-${version}"; - version = "2016-08-18"; + version = "2017-02-23"; src = fetchFromGitHub { owner = "jackaudio"; repo = "jack2"; - rev = "f2ece2418c875eb7e7ac3d25fbb484ddda47ab46"; - sha256 = "0cvb0m6qz3k8a5njwyw65l4y3izi2rsh512hv5va97kjc6wzzx4j"; + rev = "4cf826c82c8f865c281833f92f8182d457277b3a"; + sha256 = "100pkc324m57ci3fb99d3api6wh6g58lya6ssly9hxyhdsa3i7bk"; }; nativeBuildInputs = [ pkgconfig python makeWrapper ]; From 242f6caac6e4033d0ff2827d87da807a629bc7b4 Mon Sep 17 00:00:00 2001 From: Christopher League Date: Wed, 22 Feb 2017 08:13:01 -0500 Subject: [PATCH 053/216] logisim: use better jar wrapper, closes #23068 --- .../science/logic/logisim/default.nix | 15 +++++---------- 1 file changed, 5 insertions(+), 10 deletions(-) diff --git a/pkgs/applications/science/logic/logisim/default.nix b/pkgs/applications/science/logic/logisim/default.nix index 27c8947b8cc..50ef1edf63e 100644 --- a/pkgs/applications/science/logic/logisim/default.nix +++ b/pkgs/applications/science/logic/logisim/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, jre }: +{ stdenv, fetchurl, jre, makeWrapper }: let version = "2.7.1"; in @@ -11,17 +11,12 @@ stdenv.mkDerivation { }; phases = [ "installPhase" ]; - + + nativeBuildInputs = [makeWrapper]; + installPhase = '' mkdir -pv $out/bin - cp -v $src $out/logisim.jar - - cat > $out/bin/logisim << EOF - #!${stdenv.shell} - ${jre}/bin/java -jar $out/logisim.jar - EOF - - chmod +x $out/bin/logisim + makeWrapper ${jre}/bin/java $out/bin/logisim --add-flags "-jar $src" ''; meta = { From 78d3a11384185bcaeaae195cf8bc757d9ac0a130 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 10:15:30 +0100 Subject: [PATCH 054/216] mpv: 0.23.0 -> 0.24.0 --- pkgs/applications/video/mpv/default.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/applications/video/mpv/default.nix b/pkgs/applications/video/mpv/default.nix index 021c09a47e6..3a5313b7827 100644 --- a/pkgs/applications/video/mpv/default.nix +++ b/pkgs/applications/video/mpv/default.nix @@ -79,13 +79,13 @@ let }; in stdenv.mkDerivation rec { name = "mpv-${version}"; - version = "0.23.0"; + version = "0.24.0"; src = fetchFromGitHub { owner = "mpv-player"; repo = "mpv"; rev = "v${version}"; - sha256 = "02k8p4z1mwxxlg9spwwrlcciia80kyrpp09hpl60g22h85jj1ng9"; + sha256 = "1aq1lvhw4l0i2gc9x6ijaaj2h3894jbcpd4j055n0y9vg9vqm6yy"; }; patchPhase = '' @@ -170,7 +170,7 @@ in stdenv.mkDerivation rec { description = "A media player that supports many video formats (MPlayer and mplayer2 fork)"; homepage = http://mpv.io; license = licenses.gpl2Plus; - maintainers = with maintainers; [ AndersonTorres fuuzetsu ]; + maintainers = with maintainers; [ AndersonTorres fuuzetsu fpletz ]; platforms = platforms.darwin ++ platforms.linux; longDescription = '' From a50222b1a33360c693be5ff558757bc06f339c0d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Vladim=C3=ADr=20=C4=8Cun=C3=A1t?= Date: Sun, 26 Feb 2017 10:31:55 +0100 Subject: [PATCH 055/216] doc/configuration: tidy up text around #23130 changes --- doc/configuration.xml | 18 +++++++++++++----- 1 file changed, 13 insertions(+), 5 deletions(-) diff --git a/doc/configuration.xml b/doc/configuration.xml index 064c72a7630..56950e07ab5 100644 --- a/doc/configuration.xml +++ b/doc/configuration.xml @@ -10,7 +10,7 @@ will prevent installation if any of the following criteria are true: - The packages is thought to be broken, and has had + The package is thought to be broken, and has had its meta.broken set to true. @@ -23,7 +23,14 @@ true: meta.knownVulnerabilities. -Each of these criteria can be altering the nixpkgs +Note that all this is checked during evaluation already, +and the check includes any package that is evaluated. +In particular, all build-time dependencies are checked. +nix-env -qa will (attempt to) hide any packages +that would be refused. + + +Each of these criteria can be altered in the nixpkgs configuration. The nixpkgs configuration for a NixOS system is set in the @@ -68,10 +75,11 @@ configuration file located at add allowBroken = true; to your user's configuration file, like this: - + { allowBroken = true; -} +} + @@ -156,7 +164,7 @@ configuration file located at There are several ways to tweak how Nix handles a package - which has been marked as unfree. + which has been marked as insecure. From de597b03f7953c9740a4c8615b0ab50b94c5e7c9 Mon Sep 17 00:00:00 2001 From: Eric Bailey Date: Sun, 15 Jan 2017 02:16:07 -0600 Subject: [PATCH 056/216] lilypond-unstable: init at 2.19.24 --- pkgs/misc/lilypond/unstable.nix | 20 ++++++++++++++++++++ pkgs/top-level/all-packages.nix | 1 + 2 files changed, 21 insertions(+) create mode 100644 pkgs/misc/lilypond/unstable.nix diff --git a/pkgs/misc/lilypond/unstable.nix b/pkgs/misc/lilypond/unstable.nix new file mode 100644 index 00000000000..d16102df927 --- /dev/null +++ b/pkgs/misc/lilypond/unstable.nix @@ -0,0 +1,20 @@ +{ stdenv, fetchurl, guile, rsync, lilypond }: + +with stdenv.lib; + +overrideDerivation lilypond (p: rec { + majorVersion = "2.19"; + minorVersion = "24"; + version="${majorVersion}.${minorVersion}"; + name = "lilypond-${version}"; + + src = fetchurl { + url = "http://download.linuxaudio.org/lilypond/sources/v${majorVersion}/lilypond-${version}.tar.gz"; + sha256 = "0wd57swrfc2nvkj10ipdbhq6gpnckiafg2b2kpd8aydsyp248iln"; + }; + + configureFlags = [ "--disable-documentation" "--with-fonts-dir=${p.urwfonts}"]; + + buildInputs = p.buildInputs ++ [ rsync ]; + +}) diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index e9113258695..4c5c10bc3f6 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -17569,6 +17569,7 @@ with pkgs; kops = callPackage ../applications/networking/cluster/kops { }; lilypond = callPackage ../misc/lilypond { guile = guile_1_8; }; + lilypond-unstable = callPackage ../misc/lilypond/unstable.nix { guile = guile_1_8; }; mailcore2 = callPackage ../development/libraries/mailcore2 { }; From 57212c947b5a289fe4ee12e58a1246b608ef3fee Mon Sep 17 00:00:00 2001 From: Gavin Rogers Date: Sun, 26 Feb 2017 04:49:56 -0500 Subject: [PATCH 057/216] e2fsprogs: fix on Darwin (#22973) util-linux cowardly refuses to install on all platforms. Therefore we cannot rely on it for external dependancies, in particular luuid. e2fsprogs won't configure without the luuid dependancy being satisfied. --- pkgs/tools/filesystems/e2fsprogs/default.nix | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/pkgs/tools/filesystems/e2fsprogs/default.nix b/pkgs/tools/filesystems/e2fsprogs/default.nix index c44c92efae0..739b7e7c975 100644 --- a/pkgs/tools/filesystems/e2fsprogs/default.nix +++ b/pkgs/tools/filesystems/e2fsprogs/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libuuid }: +{ stdenv, fetchurl, pkgconfig, libuuid, gettext }: stdenv.mkDerivation rec { name = "e2fsprogs-1.43.4"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" "man" ]; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libuuid ]; + buildInputs = [ libuuid gettext ]; crossAttrs = { preConfigure = '' @@ -19,11 +19,12 @@ stdenv.mkDerivation rec { ''; }; - configureFlags = [ - "--enable-elf-shlibs" "--enable-symlink-install" "--enable-relative-symlinks" + configureFlags = + if stdenv.isLinux then ["--enable-elf-shlibs" "--enable-symlink-install" "--enable-relative-symlinks" # libuuid, libblkid, uuidd and fsck are in util-linux-ng (the "libuuid" dependency). - "--disable-libuuid" "--disable-uuidd" "--disable-libblkid" "--disable-fsck" - ]; + "--disable-libuuid" "--disable-uuidd" "--disable-libblkid" "--disable-fsck"] + else ["--enable-libuuid --disable-e2initrd-helper"] + ; # hacky way to make it install *.pc postInstall = '' From 6afdc516b58ce04cea38debbdc816641651f405d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Vladim=C3=ADr=20=C4=8Cun=C3=A1t?= Date: Sun, 26 Feb 2017 10:56:11 +0100 Subject: [PATCH 058/216] e2fsprogs: style nitpicks, add meta.license --- pkgs/tools/filesystems/e2fsprogs/default.nix | 20 ++++++++++++-------- 1 file changed, 12 insertions(+), 8 deletions(-) diff --git a/pkgs/tools/filesystems/e2fsprogs/default.nix b/pkgs/tools/filesystems/e2fsprogs/default.nix index 739b7e7c975..270637f7d37 100644 --- a/pkgs/tools/filesystems/e2fsprogs/default.nix +++ b/pkgs/tools/filesystems/e2fsprogs/default.nix @@ -19,11 +19,14 @@ stdenv.mkDerivation rec { ''; }; - configureFlags = - if stdenv.isLinux then ["--enable-elf-shlibs" "--enable-symlink-install" "--enable-relative-symlinks" - # libuuid, libblkid, uuidd and fsck are in util-linux-ng (the "libuuid" dependency). - "--disable-libuuid" "--disable-uuidd" "--disable-libblkid" "--disable-fsck"] - else ["--enable-libuuid --disable-e2initrd-helper"] + configureFlags = + if stdenv.isLinux then [ + "--enable-elf-shlibs" "--enable-symlink-install" "--enable-relative-symlinks" + # libuuid, libblkid, uuidd and fsck are in util-linux-ng (the "libuuid" dependency). + "--disable-libuuid" "--disable-uuidd" "--disable-libblkid" "--disable-fsck" + ] else [ + "--enable-libuuid --disable-e2initrd-helper" + ] ; # hacky way to make it install *.pc @@ -34,10 +37,11 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - meta = { + meta = with stdenv.lib; { homepage = http://e2fsprogs.sourceforge.net/; description = "Tools for creating and checking ext2/ext3/ext4 filesystems"; - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.eelco ]; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = [ maintainers.eelco ]; }; } From 716c964b216020b65bae5831fd833de3964199dd Mon Sep 17 00:00:00 2001 From: Matthias Beyer Date: Sun, 26 Feb 2017 10:59:40 +0100 Subject: [PATCH 059/216] luakit: remove There was no release for luakit in the last 5 years, so I suggest to remove it. Also because there are alternatives for vi-like browsers. Signed-off-by: Matthias Beyer --- .../networking/browsers/luakit/default.nix | 55 ------------------- pkgs/top-level/all-packages.nix | 7 --- 2 files changed, 62 deletions(-) delete mode 100644 pkgs/applications/networking/browsers/luakit/default.nix diff --git a/pkgs/applications/networking/browsers/luakit/default.nix b/pkgs/applications/networking/browsers/luakit/default.nix deleted file mode 100644 index 163eb8cf589..00000000000 --- a/pkgs/applications/networking/browsers/luakit/default.nix +++ /dev/null @@ -1,55 +0,0 @@ -{ stdenv , fetchurl , git , glib_networking , gsettings_desktop_schemas , gtk, -help2man , libunique , lua5 , luafilesystem , luajit , luasqlite3, makeWrapper, -pkgconfig , sqlite , webkit }: - -let - lualibs = [ luafilesystem luasqlite3 ]; - getPath = lib : type : "${lib}/lib/lua/${lua5.luaversion}/?.${type};${lib}/share/lua/${lua5.luaversion}/?.${type}"; - getLuaPath = lib : getPath lib "lua"; - getLuaCPath = lib : getPath lib "so"; - luaPath = stdenv.lib.concatStringsSep ";" (map getLuaPath lualibs); - luaCPath = stdenv.lib.concatStringsSep ";" (map getLuaCPath lualibs); -in -stdenv.mkDerivation { - - name = "luakit-2012.09.13"; - - meta = with stdenv.lib; { - description = "Fast, small, webkit based browser framework extensible in Lua"; - homepage = "http://luakit.org"; - license = licenses.gpl3; - maintainers = with maintainers; [ matthiasbeyer ]; - platforms = platforms.linux; # I only tested linux - }; - - src = fetchurl { - url = "https://github.com/mason-larobina/luakit/archive/2012.09.13-r1.tar.gz"; - sha256 = "067g3bp5w20jypc8rx54dpbn3ysbgxzchgpq7sld5yh2z36s1l52"; - }; - - buildInputs = [ git gsettings_desktop_schemas gtk help2man libunique lua5 - luafilesystem luajit luasqlite3 makeWrapper pkgconfig sqlite webkit ]; - - postPatch = '' - sed -i -e "s/DESTDIR/INSTALLDIR/" ./Makefile - sed -i -e "s|/etc/xdg/luakit/|$out/etc/xdg/luakit/|" lib/lousy/util.lua - patchShebangs ./build-utils - ''; - - buildPhase = '' - make DEVELOPMENT_PATHS=0 USE_LUAJIT=1 INSTALLDIR=$out DESTDIR=$out PREFIX=$out USE_GTK3=1 - ''; - - installPhase = let - luaKitPath = "$out/share/luakit/lib/?/init.lua;$out/share/luakit/lib/?.lua"; - in '' - make DEVELOPMENT_PATHS=0 INSTALLDIR=$out DESTDIR=$out PREFIX=$out USE_GTK3=1 install - wrapProgram $out/bin/luakit \ - --prefix GIO_EXTRA_MODULES : "${glib_networking.out}/lib/gio/modules" \ - --prefix XDG_DATA_DIRS : "${gsettings_desktop_schemas}/share:$out/usr/share/:$out/share/:$GSETTINGS_SCHEMAS_PATH" \ - --prefix XDG_CONFIG_DIRS : "$out/etc/xdg" \ - --set LUA_PATH '${luaKitPath};${luaPath};' \ - --set LUA_CPATH '${luaCPath};' - ''; - -} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 2a5d95916ee..2fb30f3b406 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -14193,13 +14193,6 @@ with pkgs; lrzsz = callPackage ../tools/misc/lrzsz { }; - luakit = callPackage ../applications/networking/browsers/luakit { - inherit (lua51Packages) luafilesystem luasqlite3; - lua5 = lua5_1; - gtk = gtk3; - webkit = webkitgtk2; - }; - luminanceHDR = qt55.callPackage ../applications/graphics/luminance-hdr { }; lxdvdrip = callPackage ../applications/video/lxdvdrip { }; From 488ece816949bbb92462071255c1c56cdbd74ae2 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Vladim=C3=ADr=20=C4=8Cun=C3=A1t?= Date: Sun, 26 Feb 2017 11:01:44 +0100 Subject: [PATCH 060/216] e2fsprogs: avoid larger rebuild on Linux I didn't notice this. Perhaps it's through libarchive. --- pkgs/tools/filesystems/e2fsprogs/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/tools/filesystems/e2fsprogs/default.nix b/pkgs/tools/filesystems/e2fsprogs/default.nix index 270637f7d37..8703e81fb1d 100644 --- a/pkgs/tools/filesystems/e2fsprogs/default.nix +++ b/pkgs/tools/filesystems/e2fsprogs/default.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" "man" ]; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libuuid gettext ]; + buildInputs = [ libuuid ] ++ stdenv.lib.optional (!stdenv.isLinux) gettext; crossAttrs = { preConfigure = '' From 0b27c74eb2517d307b1c1bbd04567157fba7cb63 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tomasz=20Czy=C5=BC?= Date: Sun, 26 Feb 2017 10:14:32 +0000 Subject: [PATCH 061/216] pgjwt: init at 0.0.1 (#22644) --- nixos/release.nix | 1 + nixos/tests/pgjwt.nix | 42 +++++++++++++++++++ pkgs/servers/sql/postgresql/pgjwt/default.nix | 25 +++++++++++ pkgs/top-level/all-packages.nix | 2 + 4 files changed, 70 insertions(+) create mode 100644 nixos/tests/pgjwt.nix create mode 100644 pkgs/servers/sql/postgresql/pgjwt/default.nix diff --git a/nixos/release.nix b/nixos/release.nix index 0f93deddf26..2bfe8eada0b 100644 --- a/nixos/release.nix +++ b/nixos/release.nix @@ -286,6 +286,7 @@ in rec { tests.pam-oath-login = callTest tests/pam-oath-login.nix {}; #tests.panamax = hydraJob (import tests/panamax.nix { system = "x86_64-linux"; }); tests.peerflix = callTest tests/peerflix.nix {}; + tests.pgjwt = callTest tests/pgjwt.nix {}; tests.postgresql = callTest tests/postgresql.nix {}; tests.printing = callTest tests/printing.nix {}; tests.proxy = callTest tests/proxy.nix {}; diff --git a/nixos/tests/pgjwt.nix b/nixos/tests/pgjwt.nix new file mode 100644 index 00000000000..2cf2963ae31 --- /dev/null +++ b/nixos/tests/pgjwt.nix @@ -0,0 +1,42 @@ +import ./make-test.nix ({ pkgs, ...} : +let + test = pkgs.writeText "test.sql" '' + CREATE EXTENSION pgcrypto; + CREATE EXTENSION pgjwt; + select sign('{"sub":"1234567890","name":"John Doe","admin":true}', 'secret'); + select * from verify('eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJzdWIiOiIxMjM0NTY3ODkwIiwibmFtZSI6IkpvaG4gRG9lIiwiYWRtaW4iOnRydWV9.TJVA95OrM7E2cBab30RMHrHDcEfxjoYZgeFONFh7HgQ', 'secret'); + ''; +in +{ + name = "pgjwt"; + meta = with pkgs.stdenv.lib.maintainers; { + maintainers = [ spinus ]; + }; + + nodes = { + master = + { pkgs, config, ... }: + + { + services.postgresql = let mypg = pkgs.postgresql95; in { + enable = true; + package = mypg; + extraPlugins =[pkgs.pgjwt]; + initialScript = pkgs.writeText "postgresql-init.sql" + '' + CREATE ROLE postgres WITH superuser login createdb; + ''; + }; + }; + }; + + testScript = '' + startAll; + $master->waitForUnit("postgresql"); + $master->succeed("timeout 10 bash -c 'while ! psql postgres -c \"SELECT 1;\";do sleep 1;done;'"); + $master->succeed("cat ${test} | psql postgres"); + # I can't make original test working :[ + # $master->succeed("${pkgs.perlPackages.TAPParserSourceHandlerpgTAP}/bin/pg_prove -d postgres ${pkgs.pgjwt.src}/test.sql"); + + ''; +}) diff --git a/pkgs/servers/sql/postgresql/pgjwt/default.nix b/pkgs/servers/sql/postgresql/pgjwt/default.nix new file mode 100644 index 00000000000..b4955f8184c --- /dev/null +++ b/pkgs/servers/sql/postgresql/pgjwt/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchFromGitHub }: +stdenv.mkDerivation rec { + name = "pgjwt-${version}"; + version = "0.0.1"; + src = fetchFromGitHub { + owner = "michelp"; + repo = "pgjwt"; + rev = "12a41eef15e6d3a22399e03178560d5174d496a3"; + sha256 = "1dgx7kqkf9d7j5qj3xykx238xm8jg0s6c8h7zyl4lx8dmbz9sgsv"; + }; + dontBuild = true; + installPhase = '' + mkdir -p $out/bin # current postgresql extension mechanism in nixos requires bin directory + mkdir -p $out/share/extension + cp pg*sql *.control $out/share/extension + ''; + meta = with stdenv.lib; { + description = "PostgreSQL implementation of JSON Web Tokens"; + longDescription = '' + sign() and verify() functions to create and verify JSON Web Tokens. + ''; + license = licenses.mit; + maintainers = with maintainers; [spinus]; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 2a5d95916ee..a02327d8185 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -2141,6 +2141,8 @@ with pkgs; pgf_graphics = callPackage ../tools/graphics/pgf { }; + pgjwt = callPackage ../servers/sql/postgresql/pgjwt {}; + pigz = callPackage ../tools/compression/pigz { }; pixz = callPackage ../tools/compression/pixz { }; From 289d808dcf811342312091e1a1eb543a3aac1b0d Mon Sep 17 00:00:00 2001 From: edef Date: Sun, 26 Feb 2017 11:16:36 +0100 Subject: [PATCH 062/216] pythonPackages.publicsuffix: 1.0.2 -> 1.1.0 (#23164) --- pkgs/top-level/python-packages.nix | 13 +++++++++++-- 1 file changed, 11 insertions(+), 2 deletions(-) diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 3561a93a2b6..bdc70e8f8d4 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -19389,13 +19389,22 @@ in { publicsuffix = buildPythonPackage rec { name = "publicsuffix-${version}"; - version = "1.0.2"; + version = "1.1.0"; src = pkgs.fetchurl { url = "mirror://pypi/p/publicsuffix/${name}.tar.gz"; - sha256 = "f6dfcb8a33fb3ac4f09e644cd26f8af6a09d1a45a019d105c8da58e289ca0096"; + sha256 = "1adx520249z2cy7ykwjr1k190mn2888wqn9jf8qm27ly4qymjxxf"; }; + # fix the ASCII-mode LICENSE file read + # disable test_fetch and the doctests (which also invoke fetch) + patchPhase = optionalString isPy3k '' + sed -i "s/)\.read(/,encoding='utf-8'\0/" setup.py + '' + '' + sed -i -e "/def test_fetch/i\\ + \\t@unittest.skip('requires internet')" -e "/def additional_tests():/,+1d" tests.py + ''; + meta = { description = "Allows to get the public suffix of a domain name"; homepage = "http://pypi.python.org/pypi/publicsuffix/"; From a85b55e4cddb4ab5eee9af50ea5da973b426b333 Mon Sep 17 00:00:00 2001 From: Peter Hoeg Date: Mon, 30 Jan 2017 18:35:51 +0800 Subject: [PATCH 063/216] microcode-intel: 20160714 -> 20161104 --- pkgs/os-specific/linux/microcode/intel.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/os-specific/linux/microcode/intel.nix b/pkgs/os-specific/linux/microcode/intel.nix index 6fa947fea17..ee9d25dfe20 100644 --- a/pkgs/os-specific/linux/microcode/intel.nix +++ b/pkgs/os-specific/linux/microcode/intel.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "microcode-intel-${version}"; - version = "20160714"; + version = "20161104"; src = fetchurl { - url = "http://downloadmirror.intel.com/26156/eng/microcode-${version}.tgz"; - sha256 = "03l4pkymrgbd5y9m5ys7kq85zvckmjbw7xr6pkzg2nr7jgycdagk"; + url = "http://downloadmirror.intel.com/26400/eng/microcode-${version}.tgz"; + sha256 = "1lg3bvznvwcxf66k038c57brkcxfva8crpnzj5idmczr5yk4q5bh"; }; buildInputs = [ libarchive ]; From 189e7add9ba012e2eee268c9b12595d852f7fd2b Mon Sep 17 00:00:00 2001 From: Herwig Hochleitner Date: Wed, 15 Feb 2017 04:00:28 +0100 Subject: [PATCH 064/216] ja2-stracciatella: init 0.15.1 This is the open-source version of the venerable Jagged Alliance 2. Stracciatella means almost vanilla. This version is only changed for fixes, stability improvements and to host mods. The original data files are non-free and have to be provided by the user. --- pkgs/games/ja2-stracciatella/default.nix | 19 +++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 ++ 2 files changed, 21 insertions(+) create mode 100644 pkgs/games/ja2-stracciatella/default.nix diff --git a/pkgs/games/ja2-stracciatella/default.nix b/pkgs/games/ja2-stracciatella/default.nix new file mode 100644 index 00000000000..682021eee69 --- /dev/null +++ b/pkgs/games/ja2-stracciatella/default.nix @@ -0,0 +1,19 @@ +{ stdenv, fetchFromGitHub, SDL }: + +stdenv.mkDerivation rec { + version = "0.15.1"; + name = "ja2-stracciatella-${version}"; + src = fetchFromGitHub { + owner = "ja2-stracciatella"; + repo = "ja2-stracciatella"; + rev = "v${version}"; + sha256 = "0r7j6k7412b3qfb1rnh80s55zhnriw0v03zn5bp3spcqjxh4xhv1"; + }; + enableParallelBuilding = true; + buildInputs = [ SDL ]; + meta = { + description = "Jagged Alliance 2, with community fixes"; + license = "SFI Source Code license agreement"; + homepage = "https://ja2-stracciatella.github.io/"; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 16ec2896a9f..68356d1f247 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -16301,6 +16301,8 @@ with pkgs; lua = lua5; }; + ja2-stracciatella = callPackage ../games/ja2-stracciatella { }; + klavaro = callPackage ../games/klavaro {}; kobodeluxe = callPackage ../games/kobodeluxe { }; From e3f18ec9a39cfec367d9340a89d3e0081c97f9e3 Mon Sep 17 00:00:00 2001 From: Eric Sagnes Date: Sun, 26 Feb 2017 19:37:17 +0900 Subject: [PATCH 065/216] parsimonious: 0.6.2 -> 0.7.0 --- pkgs/top-level/python-packages.nix | 9 ++++----- 1 file changed, 4 insertions(+), 5 deletions(-) diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index bdc70e8f8d4..240dc484545 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -29698,21 +29698,20 @@ EOF }; parsimonious = buildPythonPackage rec { - version = "0.6.2"; + version = "0.7.0"; name = "parsimonious-${version}"; - disabled = ! isPy27; src = pkgs.fetchFromGitHub { repo = "parsimonious"; owner = "erikrose"; rev = version; - sha256 = "1wf12adzhqjibbhy2m9abfqdgbb6z97s7wydhasir70307rqf9rj"; + sha256 = "087npc8ccryrxabmqifcz56w4wd0hzmv0mc91wrbhc1sil196j0a"; }; - propagatedBuildInputs = with self; [ nose ]; + propagatedBuildInputs = with self; [ nose six ]; meta = { homepage = "https://github.com/erikrose/parsimonious"; - description = "Fast arbitrary-lookahead packrat parser written in pure Python"; + description = "Fast arbitrary-lookahead parser written in pure Python"; license = licenses.mit; }; }; From b4d8eddf48b471008822a033624ef59f8bfaa495 Mon Sep 17 00:00:00 2001 From: Eric Sagnes Date: Sun, 26 Feb 2017 20:21:24 +0900 Subject: [PATCH 066/216] linkchecker: fix darwin build --- pkgs/tools/networking/linkchecker/default.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/tools/networking/linkchecker/default.nix b/pkgs/tools/networking/linkchecker/default.nix index 59699076a3a..d6906fdc554 100644 --- a/pkgs/tools/networking/linkchecker/default.nix +++ b/pkgs/tools/networking/linkchecker/default.nix @@ -26,6 +26,10 @@ python2Packages.buildPythonApplication rec { checkPhase = '' # the mime test fails for me... rm tests/test_mimeutil.py + ${lib.optionalString stdenv.isDarwin '' + # network tests fails on darwin + rm tests/test_network.py + ''} make test PYTESTOPTS="--tb=short" TESTS="tests/test_*.py tests/logger/test_*.py" ''; From 45f3a17785bc3a2effecb36de90d7d6a125d1b9a Mon Sep 17 00:00:00 2001 From: Eric Sagnes Date: Sun, 26 Feb 2017 17:35:55 +0900 Subject: [PATCH 067/216] styx and themes: 0.5.0 -> 0.6.0 --- pkgs/applications/misc/styx/default.nix | 16 +++++++--- pkgs/applications/misc/styx/themes.nix | 40 ++++++++++++------------- 2 files changed, 32 insertions(+), 24 deletions(-) diff --git a/pkgs/applications/misc/styx/default.nix b/pkgs/applications/misc/styx/default.nix index 23761feb0ec..8e3b0e747ae 100644 --- a/pkgs/applications/misc/styx/default.nix +++ b/pkgs/applications/misc/styx/default.nix @@ -1,20 +1,22 @@ { stdenv, fetchFromGitHub, caddy, asciidoctor -, file, lessc, sass, multimarkdown }: +, file, lessc, sass, multimarkdown, linkchecker +, perlPackages, python27 }: stdenv.mkDerivation rec { name = "styx-${version}"; - version = "0.5.0"; + version = "0.6.0"; src = fetchFromGitHub { owner = "styx-static"; repo = "styx"; rev = "v${version}"; - sha256 = "0v36i40cwrajsd02xjfdldih5g493m28lhzgjg1gd3pwk2yd6rm1"; + sha256 = "1dl6zmic8bv17f3ib8by66c2fj7izlnv9dh2cfa2m0ipkxk930vk"; }; setSourceRoot = "cd styx-*/src; export sourceRoot=`pwd`"; server = "${caddy.bin}/bin/caddy"; + linkcheck = "${linkchecker}/bin/linkchecker"; nativeBuildInputs = [ asciidoctor ]; @@ -24,6 +26,8 @@ stdenv.mkDerivation rec { sass asciidoctor multimarkdown + perlPackages.ImageExifTool + (python27.withPackages (ps: [ ps.parsimonious ])) ]; outputs = [ "out" "lib" ]; @@ -34,16 +38,20 @@ stdenv.mkDerivation rec { mkdir -p $out/share/styx cp -r scaffold $out/share/styx - cp builder.nix $out/share/styx + cp -r nix $out/share/styx mkdir -p $out/share/doc/styx asciidoctor doc/index.adoc -o $out/share/doc/styx/index.html asciidoctor doc/styx-themes.adoc -o $out/share/doc/styx/styx-themes.html + asciidoctor doc/library.adoc -o $out/share/doc/styx/library.html + cp -r doc/highlight $out/share/doc/styx/ cp -r doc/imgs $out/share/doc/styx/ + cp -r tools $out/share substituteAllInPlace $out/bin/styx substituteAllInPlace $out/share/doc/styx/index.html substituteAllInPlace $out/share/doc/styx/styx-themes.html + substituteAllInPlace $out/share/doc/styx/library.html mkdir $lib cp -r lib/* $lib diff --git a/pkgs/applications/misc/styx/themes.nix b/pkgs/applications/misc/styx/themes.nix index 86904a73584..e0bea3b23b6 100644 --- a/pkgs/applications/misc/styx/themes.nix +++ b/pkgs/applications/misc/styx/themes.nix @@ -26,12 +26,12 @@ let in { - agency = mkThemeDrv { + agency = mkThemeDrv rec { themeName = "agency"; - version = "2017-01-17"; + version = "0.6.0"; src = { - rev = "3201f65841c9e7f97cc0ab0264cafb01b1620ed7"; - sha256 = "1b3547lzmhs1lmr9gln1yvh5xrsg92m8ngrjwf0ny91y81x04da6"; + rev = "v${version}"; + sha256 = "1i9bajzgmxd3ffvgic6wwnqijsgkfr2mfdijkgw9yf3bxcdq5cb6"; }; meta = { license = stdenv.lib.licenses.asl20; @@ -44,24 +44,24 @@ in }; }; - generic-templates = mkThemeDrv { + generic-templates = mkThemeDrv rec { themeName = "generic-templates"; - version = "2017-01-18"; + version = "0.6.0"; src = { - rev = "af7cd527584322d8731a306a137a1794b18ad71a"; - sha256 = "18zk4qihi8iw5dxkm9sf6cjai1mf22l6q1ykkrgaxjd5709is0li"; + rev = "v${version}"; + sha256 = "0wr2687pffczn0sns1xvqxr2gpf5v9j64zbj6q9f7km6bq0zpiiy"; }; meta = { license = stdenv.lib.licenses.mit; }; }; - hyde = mkThemeDrv { + hyde = mkThemeDrv rec { themeName = "hyde"; - version = "2017-01-17"; + version = "0.6.0"; src = { - rev = "22caf4edc738f399bb1013d8e968d111c7fa2a59"; - sha256 = "1a2j3m941vc2pyb1dz341ww5l3xblg527szfrfqh588lmsrkdqb6"; + rev = "v${version}"; + sha256 = "0yca76p297ymxd049fkcpw8bca5b9yvv36707z31jbijriy50zxb"; }; meta = { license = stdenv.lib.licenses.mit; @@ -72,12 +72,12 @@ in }; }; - orbit = mkThemeDrv { + orbit = mkThemeDrv rec { themeName = "orbit"; - version = "2017-01-17"; + version = "0.6.0"; src = { - rev = "b5896e25561f05e026b34d04ad95a647ddfc3d03"; - sha256 = "11p11f2d0swgjil5hfx153yw13p7pcp6fwx1bnvxrlfmmx9x2yj5"; + rev = "v${version}"; + sha256 = "0qdx1r7dcycr5hzl9ix70pl4xf0426ghpi1lgh61zdpdhcch0xfi"; }; meta = { license = stdenv.lib.licenses.cc-by-30; @@ -87,12 +87,12 @@ in }; }; - showcase = mkThemeDrv { + showcase = mkThemeDrv rec { themeName = "showcase"; - version = "2017-01-17"; + version = "0.6.0"; src = { - rev = "1b4b9d4af29c05aaadfd58233f0e3f61fac726af"; - sha256 = "0mwd1ycwvlv15y431336wwlv8mdv0ikz1aymh3yxhjyxqllc2snk"; + rev = "v${version}"; + sha256 = "1jfhw49yag8l1zr69l01y1p4p88waig3xv3b6c3mfxc8jrchp7pb"; }; meta = { license = stdenv.lib.licenses.mit; From 9c2ac51006db5b74f72f7958de80b0e3d7b2947e Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 12:54:11 +0100 Subject: [PATCH 068/216] youtubeDL: 2017.02.17 -> 2017.02.24.1 --- pkgs/tools/misc/youtube-dl/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/tools/misc/youtube-dl/default.nix b/pkgs/tools/misc/youtube-dl/default.nix index 175281d2a48..b3104d6629d 100644 --- a/pkgs/tools/misc/youtube-dl/default.nix +++ b/pkgs/tools/misc/youtube-dl/default.nix @@ -14,11 +14,11 @@ with stdenv.lib; buildPythonApplication rec { name = "youtube-dl-${version}"; - version = "2017.02.17"; + version = "2017.02.24.1"; src = fetchurl { url = "https://yt-dl.org/downloads/${version}/${name}.tar.gz"; - sha256 = "06k0g3s0c27f0kwhvm2gpk01q0q0cbhqh09zvh19svl1zc2ky72b"; + sha256 = "1m2mmnjf7zw0vsbw6vjl8b4p8wa3jdmdzli970cp26awgkq5c15v"; }; buildInputs = [ zip makeWrapper ] ++ optional generateManPage pandoc; From a0cfe05ebb856de685ee621a388d12a553eb7de3 Mon Sep 17 00:00:00 2001 From: ndowens Date: Tue, 21 Feb 2017 15:52:43 -0600 Subject: [PATCH 069/216] hiawatha: init at 10.5 Removed un-needed phase; re-enabled SSL as default Hiawatha: fix indentation Hiawatha: Removed 'pkgs' fixes #23060 --- pkgs/servers/http/hiawatha/default.nix | 51 ++++++++++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 + 2 files changed, 53 insertions(+) create mode 100644 pkgs/servers/http/hiawatha/default.nix diff --git a/pkgs/servers/http/hiawatha/default.nix b/pkgs/servers/http/hiawatha/default.nix new file mode 100644 index 00000000000..26566b2281c --- /dev/null +++ b/pkgs/servers/http/hiawatha/default.nix @@ -0,0 +1,51 @@ +{ stdenv, fetchurl, cmake, + libxslt, zlib, libxml2, openssl, + enableSSL ? true, + enableMonitor ? false, + enableRproxy ? true, + enableTomahawk ? false, + enableXSLT ? true, + enableToolkit ? true +}: + +assert enableSSL -> openssl !=null; + +stdenv.mkDerivation rec { + name = "hiawatha-${version}"; + version = "10.5"; + + src = fetchurl { + url = "https://github.com/hsleisink/hiawatha/archive/v${version}.tar.gz"; + sha256 = "11nqdmmhq1glgsiza8pfh69wmpgwl51vb3xijmpcxv63a7ywp4fj"; + }; + + buildInputs = [ cmake libxslt zlib libxml2 ] ++ stdenv.lib.optional enableSSL openssl ; + + cmakeFlags = [ + ( if enableSSL then "-DENABLE_TLS=on" else "-DENABLE_TLS=off" ) + ( if enableMonitor then "-DENABLE_MONITOR=on" else "-DENABLE_MONITOR=off" ) + ( if enableRproxy then "-DENABLE_RPROXY=on" else "-DENABLE_RPROXY=off" ) + ( if enableTomahawk then "-DENABLE_TOMAHAWK=on" else "-DENABLE_TOMAHAWK=off" ) + ( if enableXSLT then "-DENABLE_XSLT=on" else "-DENABLE_XSLT=off" ) + ( if enableToolkit then "-DENABLE_TOOLKIT=on" else "-DENABLE_TOOLKIT=off" ) + "-DWEBROOT_DIR=/var/www/hiawatha" + "-DPID_DIR=/run" + "-DWORK_DIR=/var/lib/hiawatha" + "-DLOG_DIR=/var/log/hiawatha" + ]; + + # workaround because cmake tries installs stuff outside of nix store + makeFlags = [ "DESTDIR=$(out)" "PREFIX=" ]; + postInstall = '' + mv $out/$out/* $out + rm -rf $out/{var,run} + ''; + + meta = with stdenv.lib; { + description = "An advanced and secure webserver"; + license = licenses.gpl2; + homepage = "https://www.hiawatha-webserver.org"; + maintainer = [ maintainers.ndowens ]; + }; + +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 68356d1f247..540198d3b04 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -10431,6 +10431,8 @@ with pkgs; hbase = callPackage ../servers/hbase {}; + hiawatha = callPackage ../servers/http/hiawatha {}; + ircdHybrid = callPackage ../servers/irc/ircd-hybrid { }; jboss = callPackage ../servers/http/jboss { }; From 6edbf0ffa6fde6e4616a2e84aefa4e106a57f4a0 Mon Sep 17 00:00:00 2001 From: Tristan Helmich Date: Sun, 26 Feb 2017 13:05:30 +0100 Subject: [PATCH 070/216] sonarr: 2.0.0.4472 -> 2.0.0.4613 --- pkgs/servers/sonarr/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/servers/sonarr/default.nix b/pkgs/servers/sonarr/default.nix index 6f553f70712..1e7ddb53e23 100644 --- a/pkgs/servers/sonarr/default.nix +++ b/pkgs/servers/sonarr/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "sonarr-${version}"; - version = "2.0.0.4472"; + version = "2.0.0.4613"; src = fetchurl { url = "http://download.sonarr.tv/v2/master/mono/NzbDrone.master.${version}.mono.tar.gz"; - sha256 = "0sz03z057pyai151lxsdsgxlv6kvrnd1xxw7i1ss7b79l6xgmpw8"; + sha256 = "1a8wm50aw7yyigvywx7hgy58w60mi4s60dqvwwlgrbavl4z5jphl"; }; buildInputs = [ From b508c1b7926bc8f63c70ca696dcb4e9dcddbd6ee Mon Sep 17 00:00:00 2001 From: Tristan Helmich Date: Sun, 26 Feb 2017 13:22:15 +0100 Subject: [PATCH 071/216] nzbget: 17.1 -> 18.0 --- pkgs/tools/networking/nzbget/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/tools/networking/nzbget/default.nix b/pkgs/tools/networking/nzbget/default.nix index 18995553d0a..5cffb6c5c0e 100644 --- a/pkgs/tools/networking/nzbget/default.nix +++ b/pkgs/tools/networking/nzbget/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "nzbget-${version}"; - version = "17.1"; + version = "18.0"; src = fetchurl { url = "http://github.com/nzbget/nzbget/releases/download/v${version}/nzbget-${version}-src.tar.gz"; - sha256 = "0fcw43bigjmgxcz1jvqpd01sz4vciqsm311cbfv9lvmvv40gag2b"; + sha256 = "0nzm2qbhwrbq02ynfl2vgs6k58bk5fk45d3547a4g1lqhri3dijb"; }; buildInputs = [ pkgconfig libxml2 ncurses libsigcxx libpar2 gnutls From e2c95b46e5fbd9f28cc7714802f9cd3b632fd979 Mon Sep 17 00:00:00 2001 From: Jookia <166291@gmail.com> Date: Thu, 22 Sep 2016 15:45:42 +1000 Subject: [PATCH 072/216] nftables module: Add new module for nftables firewall settings fixes #18842 --- nixos/modules/module-list.nix | 1 + .../modules/services/networking/nftables.nix | 174 ++++++++++++++++++ 2 files changed, 175 insertions(+) create mode 100644 nixos/modules/services/networking/nftables.nix diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 8ec985acae3..3df3e9012ef 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -427,6 +427,7 @@ ./services/networking/namecoind.nix ./services/networking/nat.nix ./services/networking/networkmanager.nix + ./services/networking/nftables.nix ./services/networking/ngircd.nix ./services/networking/nix-serve.nix ./services/networking/nntp-proxy.nix diff --git a/nixos/modules/services/networking/nftables.nix b/nixos/modules/services/networking/nftables.nix new file mode 100644 index 00000000000..54cbba4937c --- /dev/null +++ b/nixos/modules/services/networking/nftables.nix @@ -0,0 +1,174 @@ +{ config, pkgs, lib, ... }: +with lib; +let + cfg = config.networking.nftables; +in +{ + ###### interface + + options = { + networking.nftables.enable = mkOption { + type = types.bool; + default = false; + description = + '' + Whether to enable nftables. nftables is a Linux-based packet + filtering framework intended to replace frameworks like iptables. + + This conflicts with the standard networking firewall, so make sure to + disable it before using nftables. + ''; + }; + networking.nftables.ruleset = mkOption { + type = types.lines; + default = + '' + table inet filter { + # Block all IPv4/IPv6 input traffic except SSH. + chain input { + type filter hook input priority 0; + ct state invalid reject + ct state {established, related} accept + iifname lo accept + tcp dport 22 accept + reject + } + + # Allow anything in. + chain output { + type filter hook output priority 0; + ct state invalid reject + ct state {established, related} accept + oifname lo accept + accept + } + + chain forward { + type filter hook forward priority 0; + accept + } + } + ''; + example = + '' + # Check out http://wiki.nftables.org/ for better documentation. + + define LAN = 192.168.0.1/24 + + # Handle IPv4 traffic. + table ip filter { + chain input { + type filter hook input priority 0; + # Handle existing connections. + ct state invalid reject + ct state {established, related} accept + # Allow loopback for applications. + iifname lo accept + # Allow people to ping us on LAN. + ip protocol icmp ip daddr $LAN accept + # Allow SSH over LAN. + tcp dport 22 ip daddr $LAN accept + # Reject all other output traffic. + reject + } + + chain output { + type filter hook output priority 0; + # Handle existing connections. + ct state invalid reject + ct state {established, related} accept + # Allow loopback for applications. + oifname lo accept + # Allow the Tor user to run its daemon, + # but only on WAN in case of compromise. + skuid tor ip daddr != $LAN accept + # Allowing pinging others on LAN. + ip protocol icmp ip daddr $LAN accept + # Reject all other output traffic. + reject + } + + chain forward { + type filter hook forward priority 0; + reject + } + } + + # Block all IPv6 traffic. + table ip6 filter { + chain input { + type filter hook input priority 0; + reject + } + + chain output { + type filter hook output priority 0; + reject + } + + chain forward { + type filter hook forward priority 0; + reject + } + } + ''; + description = + '' + The ruleset to be used with nftables. Should be in a format that + can be loaded using "/bin/nft -f". The ruleset is updated atomically. + ''; + }; + networking.nftables.rulesetFile = mkOption { + type = types.path; + default = pkgs.writeTextFile { + name = "nftables-rules"; + text = cfg.ruleset; + }; + description = + '' + The ruleset file to be used with nftables. Should be in a format that + can be loaded using "nft -f". The ruleset is updated atomically. + ''; + }; + }; + + ###### implementation + + config = mkIf cfg.enable { + assertions = [{ + assertion = config.networking.firewall.enable == false; + message = "You can not use nftables with services.networking.firewall."; + }]; + boot.blacklistedKernelModules = [ "ip_tables" ]; + environment.systemPackages = [ pkgs.nftables ]; + systemd.services.nftables = { + description = "nftables firewall"; + before = [ "network-pre.target" ]; + wants = [ "network-pre.target" ]; + wantedBy = [ "multi-user.target" ]; + reloadIfChanged = true; + serviceConfig = let + rulesScript = pkgs.writeScript "nftables-rules" '' + #! ${pkgs.nftables}/bin/nft -f + flush ruleset + include "${cfg.rulesetFile}" + ''; + checkScript = pkgs.writeScript "nftables-check" '' + #! ${pkgs.stdenv.shell} -e + if $(${pkgs.kmod}/bin/lsmod | grep -q ip_tables); then + echo "Unload ip_tables before using nftables!" 1>&2 + exit 1 + else + ${rulesScript} + fi + ''; + in { + Type = "oneshot"; + RemainAfterExit = true; + ExecStart = checkScript; + ExecReload = checkScript; + ExecStop = "${pkgs.nftables}/bin/nft flush ruleset"; + }; + }; + }; +} From 0150d9a95cbca2b317cba9bb3c7acd48bd625209 Mon Sep 17 00:00:00 2001 From: Joachim Fasting Date: Sun, 26 Feb 2017 14:01:44 +0100 Subject: [PATCH 073/216] grsecurity: 4.9.11-201702222257 -> 4.9.12-201702231830 --- pkgs/os-specific/linux/kernel/linux-grsecurity.nix | 4 ++-- pkgs/os-specific/linux/kernel/patches.nix | 6 +++--- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/linux-grsecurity.nix b/pkgs/os-specific/linux/kernel/linux-grsecurity.nix index c185442c772..ad26b399a94 100644 --- a/pkgs/os-specific/linux/kernel/linux-grsecurity.nix +++ b/pkgs/os-specific/linux/kernel/linux-grsecurity.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, perl, buildLinux, ... } @ args: import ./generic.nix (args // rec { - version = "4.9.11"; + version = "4.9.12"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha512 = "3lh2nrkq3254diqdjry857gmh39ijxxhd7h8563jdzv9i8awv564zajpdcr6bjpf5swyicjsylifym2b5ww41b0fp6z4pkns9mmppny"; + sha512 = "37riipfdm8xw53598w15l3x0gy06rmp22j1yf5wql2d1fzhgf29x007axdi7swq4jnpihd934mvpfb1sy42srkinps0x5gvv65n00bs"; }; kernelPatches = args.kernelPatches; diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index c5a6b999f85..8ea41ff5937 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -95,9 +95,9 @@ rec { }; grsecurity_testing = grsecPatch - { kver = "4.9.11"; - grrev = "201702222257"; - sha512 = "3yla1fw6iykzb19rpyqg910qhizi3njcywxksxcylf2z2da02i7nkjia0n0qn8n16lwlj44d9f59ka5xsml5r4vha77c850b6w436ni"; + { kver = "4.9.12"; + grrev = "201702231830"; + sha512 = "1455wpdy5lizdibs86llaxf087vggl921dn83pf4cnc9fbzc5mwa46vazahv9g8467bb335vgg5fcba2i0026s1h9vcsvyy6470m4i3"; }; # This patch relaxes grsec constraints on the location of usermode helpers, From 4bb14b23ab971eb4bc607e122d4eaf36dab4f649 Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Sun, 26 Feb 2017 13:18:09 +0100 Subject: [PATCH 074/216] supercollider: 3.7.2 -> 3.8.0 --- pkgs/development/interpreters/supercollider/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/interpreters/supercollider/default.nix b/pkgs/development/interpreters/supercollider/default.nix index dcb1f8e7062..f32cb9db02a 100644 --- a/pkgs/development/interpreters/supercollider/default.nix +++ b/pkgs/development/interpreters/supercollider/default.nix @@ -9,12 +9,12 @@ in stdenv.mkDerivation rec { name = "supercollider-${version}"; - version = "3.7.2"; + version = "3.8.0"; src = fetchurl { url = "https://github.com/supercollider/supercollider/releases/download/Version-${version}/SuperCollider-${version}-Source-linux.tar.bz2"; - sha256 = "1mybxcnl7flliz74kdfnvh18v5dwd9zbdsw2kc7wpl4idcly1n0s"; + sha256 = "053b2xc2x1sczvlb41w6iciqlwy0zyfiv3jrynx4f8jgd6mizsm6"; }; hardeningDisable = [ "stackprotector" ]; From d579b8c88e6a85127ce64e04b9bc1c37f6cce788 Mon Sep 17 00:00:00 2001 From: Tristan Helmich Date: Sun, 26 Feb 2017 13:45:53 +0100 Subject: [PATCH 075/216] emby: 3.1.5 -> 3.2.4 --- pkgs/servers/emby/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/servers/emby/default.nix b/pkgs/servers/emby/default.nix index 9fc0a303ad0..340e376e9ed 100644 --- a/pkgs/servers/emby/default.nix +++ b/pkgs/servers/emby/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "emby-${version}"; - version = "3.1.5"; + version = "3.2.4"; src = fetchurl { url = "https://github.com/MediaBrowser/Emby/releases/download/${version}/Emby.Mono.zip"; - sha256 = "0s0m456rxdrj58zbaby6mdgc1ndc3zx2c07n94hn3hdlgralgwaa"; + sha256 = "0a14wr2yal9q5vlwadyki9w35bn4f3r7r5w3zynp4f7460lfapmf"; }; buildInputs = with pkgs; [ From 8b40d2e305e861c4f18a96af943fa927125b9537 Mon Sep 17 00:00:00 2001 From: Graham Christensen Date: Sun, 26 Feb 2017 09:16:01 -0500 Subject: [PATCH 076/216] mcelog: 144 -> 148 --- pkgs/os-specific/linux/mcelog/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/os-specific/linux/mcelog/default.nix b/pkgs/os-specific/linux/mcelog/default.nix index dee201c1778..64b937390f1 100644 --- a/pkgs/os-specific/linux/mcelog/default.nix +++ b/pkgs/os-specific/linux/mcelog/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "mcelog-${version}"; - version = "144"; + version = "148"; src = fetchFromGitHub { - sha256 = "05b1x9z6x9yz3xmb93qvwwssjbvp28bawy8as9bfm29pyhzdxx6k"; + sha256 = "04mzscvr38r2q9da9wmv3cxb99vrkxks1mzgvwsxk753xan3p42c"; rev = "v${version}"; repo = "mcelog"; owner = "andikleen"; From ec47fac2c3d1a7e30cf403b88c3b6e34f83a7a68 Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Sun, 26 Feb 2017 15:34:49 +0100 Subject: [PATCH 077/216] ir.lv2: 1.2.2 -> 1.2.3 --- pkgs/applications/audio/ir.lv2/default.nix | 25 ++++++++++------------ 1 file changed, 11 insertions(+), 14 deletions(-) diff --git a/pkgs/applications/audio/ir.lv2/default.nix b/pkgs/applications/audio/ir.lv2/default.nix index d6dbc4c55a9..cc613541a25 100644 --- a/pkgs/applications/audio/ir.lv2/default.nix +++ b/pkgs/applications/audio/ir.lv2/default.nix @@ -1,20 +1,21 @@ -{ stdenv, fetchurl, fftw, gtk, lv2, libsamplerate, libsndfile, pkgconfig, zita-convolver }: +{ stdenv, fetchFromGitHub, fftw, gtk2, lv2, libsamplerate, libsndfile, pkgconfig, zita-convolver }: stdenv.mkDerivation rec { name = "ir.lv2-${version}"; - version = "1.2.2"; + version = "1.2.3"; - src = fetchurl { - url = "http://factorial.hu/system/files/${name}.tar.gz"; - sha256 = "17a6h2mv9xv41jpbx6bdakkngin4kqzh2v67l4076ddq609k5a7v"; + src = fetchFromGitHub { + owner = "tomszilagyi"; + repo = "ir.lv2"; + rev = "${version}"; + sha256 = "16vy06qb0vgwg4yx15grzh5m2q3cbzm3jd0p37g2qb8rgvjhladg"; }; - buildInputs = [ fftw gtk lv2 libsamplerate libsndfile pkgconfig zita-convolver ]; + buildInputs = [ fftw gtk2 lv2 libsamplerate libsndfile zita-convolver ]; - buildPhase = '' - make - make convert4chan - ''; + nativeBuildInputs = [ pkgconfig ]; + + postBuild = "make convert4chan"; installPhase = '' mkdir -p "$out/bin" @@ -23,10 +24,6 @@ stdenv.mkDerivation rec { make PREFIX="$out" install install -Dm755 convert4chan "$out/bin/convert4chan" - # fixed location - sed -i 's/, but seem like its gone://' README - sed -i 's@rhythminmind.net/1313@rhythminmind.net/STN@' README - install -Dm644 README "$out/share/doc/README" ''; meta = with stdenv.lib; { From 6c36d9fa208ac1b03966e4349f4850b2ec4301be Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= Date: Sun, 26 Feb 2017 15:23:01 +0100 Subject: [PATCH 078/216] nftables: make default configuration null reason: - We currently have an open discussion regarding a more modular firewall (https://github.com/NixOS/nixpkgs/issues/23181) and leaving null makes future extension easier. - the current default might not cover all use cases (different ssh port) and might break setups, if applied blindly --- .../modules/services/networking/nftables.nix | 115 +++++------------- 1 file changed, 33 insertions(+), 82 deletions(-) diff --git a/nixos/modules/services/networking/nftables.nix b/nixos/modules/services/networking/nftables.nix index 54cbba4937c..029c3df8993 100644 --- a/nixos/modules/services/networking/nftables.nix +++ b/nixos/modules/services/networking/nftables.nix @@ -21,97 +21,48 @@ in }; networking.nftables.ruleset = mkOption { type = types.lines; - default = - '' - table inet filter { - # Block all IPv4/IPv6 input traffic except SSH. - chain input { - type filter hook input priority 0; - ct state invalid reject - ct state {established, related} accept - iifname lo accept - tcp dport 22 accept - reject - } + example = '' + # Check out https://wiki.nftables.org/ for better documentation. + # Table for both IPv4 and IPv6. + table inet filter { + # Block all incomming connections traffic except SSH and "ping". + chain input { + type filter hook input priority 0; - # Allow anything in. - chain output { - type filter hook output priority 0; - ct state invalid reject - ct state {established, related} accept - oifname lo accept - accept - } + # accept any localhost traffic + iifname lo accept - chain forward { - type filter hook forward priority 0; - accept - } - } - ''; - example = - '' - # Check out http://wiki.nftables.org/ for better documentation. + # accept traffic originated from us + ct state {established, related} accept - define LAN = 192.168.0.1/24 + # ICMP + # routers may also want: mld-listener-query, nd-router-solicit + ip6 nexthdr icmpv6 icmpv6 type { destination-unreachable, packet-too-big, time-exceeded, parameter-problem, nd-router-advert, nd-neighbor-solicit, nd-neighbor-advert } accept + ip protocol icmp icmp type { destination-unreachable, router-advertisement, time-exceeded, parameter-problem } accept - # Handle IPv4 traffic. - table ip filter { - chain input { - type filter hook input priority 0; - # Handle existing connections. - ct state invalid reject - ct state {established, related} accept - # Allow loopback for applications. - iifname lo accept - # Allow people to ping us on LAN. - ip protocol icmp ip daddr $LAN accept - # Allow SSH over LAN. - tcp dport 22 ip daddr $LAN accept - # Reject all other output traffic. - reject - } + # allow "ping" + ip6 nexthdr icmp icmpv6 type echo-request accept + ip protocol icmp icmp type echo-request accept - chain output { - type filter hook output priority 0; - # Handle existing connections. - ct state invalid reject - ct state {established, related} accept - # Allow loopback for applications. - oifname lo accept - # Allow the Tor user to run its daemon, - # but only on WAN in case of compromise. - skuid tor ip daddr != $LAN accept - # Allowing pinging others on LAN. - ip protocol icmp ip daddr $LAN accept - # Reject all other output traffic. - reject - } + # accept SSH connections (required for a server) + tcp dport 22 accept - chain forward { - type filter hook forward priority 0; - reject - } + # count and drop any other traffic + counter drop } - # Block all IPv6 traffic. - table ip6 filter { - chain input { - type filter hook input priority 0; - reject - } - - chain output { - type filter hook output priority 0; - reject - } - - chain forward { - type filter hook forward priority 0; - reject - } + # Allow all outgoing connections. + chain output { + type filter hook output priority 0; + accept } - ''; + + chain forward { + type filter hook forward priority 0; + accept + } + } + ''; description = '' The ruleset to be used with nftables. Should be in a format that From 4b6f021251e60af9f61311e116eef043a2ed0d5d Mon Sep 17 00:00:00 2001 From: obadz Date: Sun, 26 Feb 2017 16:22:21 +0000 Subject: [PATCH 079/216] Revert "lightdm: obbey services.xserver.{window/desktop}Manager.default" This reverts commit 29caa185a7e4aaa0d621a4f117f3e8f653261fda. Not clear what the proper thing to do is. cf94cdb59b renders this question mostly moot. Reverting before 17.03 branch to avoid a repeat of #19054. --- nixos/modules/services/x11/display-managers/lightdm.nix | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/nixos/modules/services/x11/display-managers/lightdm.nix b/nixos/modules/services/x11/display-managers/lightdm.nix index 4afef32aaa4..82b9a2fce5a 100644 --- a/nixos/modules/services/x11/display-managers/lightdm.nix +++ b/nixos/modules/services/x11/display-managers/lightdm.nix @@ -46,15 +46,13 @@ let [Seat:*] xserver-command = ${xserverWrapper} session-wrapper = ${dmcfg.session.script} - ${optionalString (elem defaultSessionName dmcfg.session.names) '' - user-session = ${defaultSessionName} - ''} ${optionalString cfg.greeter.enable '' greeter-session = ${cfg.greeter.name} ''} ${optionalString cfg.autoLogin.enable '' autologin-user = ${cfg.autoLogin.user} autologin-user-timeout = ${toString cfg.autoLogin.timeout} + autologin-session = ${defaultSessionName} ''} ${cfg.extraSeatDefaults} ''; From 3a4c851b89040bb9d728659c7090a65b6e7659ea Mon Sep 17 00:00:00 2001 From: Johannes Bornhold Date: Sun, 26 Feb 2017 17:24:52 +0100 Subject: [PATCH 080/216] mysql57: Add developer_cmds as build input on darwin --- pkgs/servers/sql/mysql/5.7.x.nix | 4 ++-- pkgs/top-level/all-packages.nix | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/servers/sql/mysql/5.7.x.nix b/pkgs/servers/sql/mysql/5.7.x.nix index 71867a94ef2..be4ab80f705 100644 --- a/pkgs/servers/sql/mysql/5.7.x.nix +++ b/pkgs/servers/sql/mysql/5.7.x.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, cmake, bison, ncurses, openssl, readline, zlib, perl -, boost, cctools, CoreServices }: +, boost, cctools, CoreServices, developer_cmds }: # Note: zlib is not required; MySQL can use an internal zlib. @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { ''; buildInputs = [ cmake bison ncurses openssl readline zlib boost ] - ++ stdenv.lib.optionals stdenv.isDarwin [ perl cctools CoreServices ]; + ++ stdenv.lib.optionals stdenv.isDarwin [ perl cctools CoreServices developer_cmds ]; enableParallelBuilding = true; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 540198d3b04..b031c201948 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -10620,7 +10620,7 @@ with pkgs; }; mysql57 = callPackage ../servers/sql/mysql/5.7.x.nix { - inherit (darwin) cctools; + inherit (darwin) cctools developer_cmds; inherit (darwin.apple_sdk.frameworks) CoreServices; boost = boost159; }; From 14305066667a59f8b809274182fe7ae120b099bf Mon Sep 17 00:00:00 2001 From: Graham Christensen Date: Sun, 26 Feb 2017 09:50:01 -0500 Subject: [PATCH 081/216] mcelog: init Machine Check Exception Logging Daemon service --- nixos/modules/hardware/mcelog.nix | 37 +++++++++++++++++++++++++++++++ nixos/modules/module-list.nix | 1 + 2 files changed, 38 insertions(+) create mode 100644 nixos/modules/hardware/mcelog.nix diff --git a/nixos/modules/hardware/mcelog.nix b/nixos/modules/hardware/mcelog.nix new file mode 100644 index 00000000000..e4ac7d39053 --- /dev/null +++ b/nixos/modules/hardware/mcelog.nix @@ -0,0 +1,37 @@ +{ config, lib, pkgs, ... }: + +with lib; + +{ + meta.maintainers = [ maintainers.grahamc ]; + options = { + + hardware.mcelog = { + enable = mkOption { + type = types.bool; + default = false; + description = '' + Enable the Machine Check Exception logger. + ''; + }; + }; + + }; + + config = mkIf config.hardware.mcelog.enable { + systemd.services.mcelog = { + description = "Machine Check Exception Logging Daemon"; + wantedBy = [ "multi-user.target" ]; + + serviceConfig = { + ExecStart = "${pkgs.mcelog}/bin/mcelog --daemon --foreground"; + SuccessExitStatus = [ 0 15 ]; + + ProtectHome = true; + PrivateNetwork = true; + PrivateTmp = true; + }; + }; + }; + +} diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 3df3e9012ef..ca4b04be7ad 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -30,6 +30,7 @@ ./hardware/cpu/amd-microcode.nix ./hardware/cpu/intel-microcode.nix ./hardware/ksm.nix + ./hardware/mcelog.nix ./hardware/network/b43.nix ./hardware/network/intel-2100bg.nix ./hardware/network/intel-2200bg.nix From 1d9fa60df014129629eb3b0661d566af10ee09ae Mon Sep 17 00:00:00 2001 From: Michael Raskin <7c6f434c@mail.ru> Date: Sat, 25 Feb 2017 17:05:47 +0100 Subject: [PATCH 082/216] wavefunctioncollapse: 0.0pre20160930 -> 0.0pre20170130 --- pkgs/tools/graphics/wavefunctioncollapse/default.nix | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/pkgs/tools/graphics/wavefunctioncollapse/default.nix b/pkgs/tools/graphics/wavefunctioncollapse/default.nix index 32c2104c0f9..20d07e52f6c 100644 --- a/pkgs/tools/graphics/wavefunctioncollapse/default.nix +++ b/pkgs/tools/graphics/wavefunctioncollapse/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchFromGitHub, mono}: stdenv.mkDerivation rec { name = "wavefunctioncollapse-${version}"; - version = "0.0pre20160930"; + version = "0.0pre20170130"; src = fetchFromGitHub { owner = "mxgmn"; repo = "WaveFunctionCollapse"; - rev = "333f592b6612da43ec475c988c09325378c662e9"; - sha256 = "1cpwn52ka1zsi2yc7rfg5r9ll2kjgzabx4a5axcp9c4ph5qzsza6"; + rev = "ef660c037b1d7c4ebce66efc625af2bb2f2111c0"; + sha256 = "1dr5fvdgn1jqqacby6rrqm951adx3jw0j70r5i8pmrqnnw482l8m"; }; buildPhase = '' mcs *.cs -out:wavefunctioncollapse.exe -r:System.Drawing From a872e222807f11b1ec47d3289eca5bc39953525c Mon Sep 17 00:00:00 2001 From: Michael Raskin <7c6f434c@mail.ru> Date: Sun, 26 Feb 2017 18:09:51 +0100 Subject: [PATCH 083/216] speed_dreams: 2.0.0-a3 -> 2.2.1 --- pkgs/games/speed-dreams/default.nix | 63 ++++++++++++++++++++++------- 1 file changed, 48 insertions(+), 15 deletions(-) diff --git a/pkgs/games/speed-dreams/default.nix b/pkgs/games/speed-dreams/default.nix index e6105eab95b..cb7a345900a 100644 --- a/pkgs/games/speed-dreams/default.nix +++ b/pkgs/games/speed-dreams/default.nix @@ -1,29 +1,62 @@ { fetchurl, stdenv, mesa, freeglut, libX11, plib, openal, freealut, libXrandr, xproto, -libXext, libSM, libICE, libXi, libXt, libXrender, libXxf86vm, -libpng, zlib, bash, p7zip, SDL, enet, libjpeg, cmake}: +libXext, libSM, libICE, libXi, libXt, libXrender, libXxf86vm, openscenegraph, expat, +libpng, zlib, bash, SDL2, enet, libjpeg, cmake, pkgconfig, libvorbis}: stdenv.mkDerivation rec { - version = "2.0.0-a3-r3412"; + version = "2.2.1-r6404"; name = "speed-dreams-${version}"; src = fetchurl { - url = "mirror://sourceforge/speed-dreams/2.0.0/${name}-src.tar.7z"; - sha256 = "0hn5fgn90wmd1xha1la133harx47qc647f4zj8hfdvd7wb3kpjab"; + url = "mirror://sourceforge/speed-dreams/2.2.1/speed-dreams-src-base-${version}.tar.xz"; + sha256 = "0347sk8xbdsyvl48qybbycd7hvzsx5b37zzjx1yx73nzddhmlpbx"; }; - unpackPhase = '' - 7z e -so ${src} | tar -x - cd */ + cars-and-tracks = fetchurl { + url = "mirror://sourceforge/speed-dreams/2.2.1/speed-dreams-src-hq-cars-and-tracks-${version}.tar.xz"; + sha256 = "1h50l110n42nrq6j3kcyhi3swgmrjcg979vb6h0zsf46afwv0z3q"; + }; + + more-cars-and-tracks = fetchurl { + url = "mirror://sourceforge/speed-dreams/2.2.1/speed-dreams-src-more-hq-cars-and-tracks-${version}.tar.xz"; + sha256 = "03m3gwd03jqgsfjdglzmrv613cp4gh50i63fwmnwl282zhxydcwd"; + }; + + wip-cars-and-tracks = fetchurl { + url = "mirror://sourceforge/speed-dreams/2.2.1/speed-dreams-src-wip-cars-and-tracks-${version}.tar.xz"; + sha256 = "0ysk756rd294xzpwvmjh0mb229ngzrc4ry9lpyhyak98rbcp9hxm"; + }; + + sourceRoot = "."; + + postUnpack = '' + echo Unpacking data + tar -xf ${cars-and-tracks} + tar -xf ${more-cars-and-tracks} + tar -xf ${wip-cars-and-tracks} ''; - # Order important; it wants libpng12 and some x libs propagate libpng15 + preBuild = '' + make -C src/libs/portability + make -C src/libs/portability portability.o + ar -rv "$(echo lib*/games/speed-dreams*/lib)"/libportability_static.a src/libs/portability/CMakeFiles/portability.dir/portability.cpp.o + export NIX_LDFLAGS="$NIX_LDFLAGS -L$(echo $PWD/lib*/games/speed-dreams*/lib) -lexpat" + echo "libportability_static.a built" + ''; + + postInstall = '' + mkdir "$out/bin" + for i in "$out"/games/*; do + echo '#!${stdenv.shell}' >> "$out/bin/$(basename "$i")" + echo "$i"' "$@"' >> "$out/bin/$(basename "$i")" + chmod a+x "$out/bin/$(basename "$i")" + done + ''; + + nativeBuildInputs = [ pkgconfig cmake ]; + buildInputs = [ libpng mesa freeglut libX11 plib openal freealut libXrandr xproto - libXext libSM libICE libXi libXt libXrender libXxf86vm zlib bash - p7zip SDL enet libjpeg cmake ]; - - installTargets = "install"; - - dontUseCmakeBuildDir=true; + libXext libSM libICE libXi libXt libXrender libXxf86vm zlib bash expat + SDL2 enet libjpeg openscenegraph libvorbis ]; meta = { description = "Car racing game - TORCS fork with more experimental approach"; From 5e937b173d4f6b9e90784e65c886e7e0f3798817 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 16:21:52 +0100 Subject: [PATCH 084/216] gstreamer: 1.10.3 -> 1.10.4 for multiple CVEs See https://gstreamer.freedesktop.org/releases/1.10/#1.10.4. Fixes: * CVE-2017-5847 * CVE-2017-5848 cc #23072 --- pkgs/development/libraries/gstreamer/bad/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/base/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/core/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/ges/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/good/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/libav/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/python/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/ugly/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/vaapi/default.nix | 4 ++-- pkgs/development/libraries/gstreamer/validate/default.nix | 4 ++-- 10 files changed, 20 insertions(+), 20 deletions(-) diff --git a/pkgs/development/libraries/gstreamer/bad/default.nix b/pkgs/development/libraries/gstreamer/bad/default.nix index f0e88551169..1125bb7bb8a 100644 --- a/pkgs/development/libraries/gstreamer/bad/default.nix +++ b/pkgs/development/libraries/gstreamer/bad/default.nix @@ -14,7 +14,7 @@ let inherit (stdenv.lib) optional optionalString; in stdenv.mkDerivation rec { - name = "gst-plugins-bad-1.10.3"; + name = "gst-plugins-bad-1.10.4"; meta = with stdenv.lib; { description = "Gstreamer Bad Plugins"; @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-plugins-bad/${name}.tar.xz"; - sha256 = "1rwla1p57yzygb68z2xk5l5kvqzj5w3nxq0davkwk139zd8r6294"; + sha256 = "0rk9rlzf2b0hjw5hwbadz53yh4ls7vm3w3cshsa3n8isdd8axp93"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/base/default.nix b/pkgs/development/libraries/gstreamer/base/default.nix index ecb431091ad..960805cdcfc 100644 --- a/pkgs/development/libraries/gstreamer/base/default.nix +++ b/pkgs/development/libraries/gstreamer/base/default.nix @@ -4,7 +4,7 @@ }: stdenv.mkDerivation rec { - name = "gst-plugins-base-1.10.3"; + name = "gst-plugins-base-1.10.4"; meta = { description = "Base plugins and helper libraries"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-plugins-base/${name}.tar.xz"; - sha256 = "040pifl4cgsqqz2si4s1y5khj3zwm39w21siagxwp805swbrcag6"; + sha256 = "1dsyjf6rncsbg4rfj40cvf1wwpjj9h3j3c7bh4zp7jylnfv4blpn"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/core/default.nix b/pkgs/development/libraries/gstreamer/core/default.nix index 72a519ab34f..54ff189caef 100644 --- a/pkgs/development/libraries/gstreamer/core/default.nix +++ b/pkgs/development/libraries/gstreamer/core/default.nix @@ -3,7 +3,7 @@ }: stdenv.mkDerivation rec { - name = "gstreamer-1.10.3"; + name = "gstreamer-1.10.4"; meta = { description = "Open source multimedia framework"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gstreamer/${name}.tar.xz"; - sha256 = "0gdnxg5igbhnpjhrzp31w1ww95j805byqd6mj3x29wli54dxrfc5"; + sha256 = "062jidnw17hkpva6ddygp80gyasyigfkpm1y7w56rk56a2pzbhjh"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/ges/default.nix b/pkgs/development/libraries/gstreamer/ges/default.nix index ab3a0c00e03..cf69fa943a2 100644 --- a/pkgs/development/libraries/gstreamer/ges/default.nix +++ b/pkgs/development/libraries/gstreamer/ges/default.nix @@ -3,7 +3,7 @@ }: stdenv.mkDerivation rec { - name = "gstreamer-editing-services-1.10.3"; + name = "gstreamer-editing-services-1.10.4"; meta = with stdenv.lib; { description = "Library for creation of audio/video non-linear editors"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gstreamer-editing-services/${name}.tar.xz"; - sha256 = "0ax3qbi1m4wcii03ysln3lm8nhw3fr2rd35ndfy4mr4vg2nm5gxw"; + sha256 = "0i11b1rwkjsy9gxrf9vk9lgg8qm60ggfi5lp0ncyh4lxvh16vbgj"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/good/default.nix b/pkgs/development/libraries/gstreamer/good/default.nix index c0d017fcaea..4d9582d1381 100644 --- a/pkgs/development/libraries/gstreamer/good/default.nix +++ b/pkgs/development/libraries/gstreamer/good/default.nix @@ -10,7 +10,7 @@ let inherit (stdenv.lib) optionals optionalString; in stdenv.mkDerivation rec { - name = "gst-plugins-good-1.10.3"; + name = "gst-plugins-good-1.10.4"; meta = with stdenv.lib; { description = "Gstreamer Good Plugins"; @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-plugins-good/${name}.tar.xz"; - sha256 = "0mar8ss8bvpz699ql4kgndvna8qsv7kj372py4435ffl6hzfj1sf"; + sha256 = "0zjdwxn83sp9wjp9rxjbyk8kf284g9av7l2v6rjldi586hacd1la"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/libav/default.nix b/pkgs/development/libraries/gstreamer/libav/default.nix index 32000bb89a0..c67a3c708b3 100644 --- a/pkgs/development/libraries/gstreamer/libav/default.nix +++ b/pkgs/development/libraries/gstreamer/libav/default.nix @@ -9,7 +9,7 @@ assert withSystemLibav -> libav != null; stdenv.mkDerivation rec { - name = "gst-libav-1.10.3"; + name = "gst-libav-1.10.4"; meta = { homepage = "http://gstreamer.freedesktop.org"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-libav/${name}.tar.xz"; - sha256 = "1aajayv63ardkbmcg7pnh2d87r067325a5wzinwihaw6n5jw2sws"; + sha256 = "12r68ri03mgbbwsxyn6yklgfsq32rwvyq83zw0aq7m73fp5gx83c"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/python/default.nix b/pkgs/development/libraries/gstreamer/python/default.nix index 7db887e36be..09c11282058 100644 --- a/pkgs/development/libraries/gstreamer/python/default.nix +++ b/pkgs/development/libraries/gstreamer/python/default.nix @@ -6,14 +6,14 @@ let inherit (pythonPackages) python pygobject3; in stdenv.mkDerivation rec { - name = "gst-python-1.10.3"; + name = "gst-python-1.10.4"; src = fetchurl { urls = [ "${meta.homepage}/src/gst-python/${name}.tar.xz" "mirror://gentoo/distfiles/${name}.tar.xz" ]; - sha256 = "bdfa2d06dfe0ce68f638b04fed6890db506416c1dcf1279e83458269d719a4e8"; + sha256 = "bdfa2d07dfe0ce68f638b04fed6890db506416c1dcf1279e83458269d719a4e8"; }; patches = [ ./different-path-with-pygobject.patch ]; diff --git a/pkgs/development/libraries/gstreamer/ugly/default.nix b/pkgs/development/libraries/gstreamer/ugly/default.nix index 7220acf2d4d..bd034ac13a1 100644 --- a/pkgs/development/libraries/gstreamer/ugly/default.nix +++ b/pkgs/development/libraries/gstreamer/ugly/default.nix @@ -5,7 +5,7 @@ }: stdenv.mkDerivation rec { - name = "gst-plugins-ugly-1.10.3"; + name = "gst-plugins-ugly-1.10.4"; meta = with stdenv.lib; { description = "Gstreamer Ugly Plugins"; @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-plugins-ugly/${name}.tar.xz"; - sha256 = "1lkb8kznc9wxmhbp7k67b50y27nz8jp2x2flb91xzydz7b89f5f9"; + sha256 = "0ngsiwcsz3jd08id4mc0qiy2q1n7h2kkvdnh3r1vm725m1ycg1k3"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/vaapi/default.nix b/pkgs/development/libraries/gstreamer/vaapi/default.nix index ec882a2863a..ae32c8f95ae 100644 --- a/pkgs/development/libraries/gstreamer/vaapi/default.nix +++ b/pkgs/development/libraries/gstreamer/vaapi/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gst-vaapi-${version}"; - version = "1.10.3"; + version = "1.10.4"; src = fetchurl { url = "${meta.homepage}/src/gstreamer-vaapi/gstreamer-vaapi-${version}.tar.xz"; - sha256 = "07ing6z7n0ylz5vknk3d2lw54a6szd6m8hqc3px6lahmd832ga6f"; + sha256 = "0xfyf1mgcxnwf380wxv20hakl2srp34dmiw6bm4zkncl2mi91rh3"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/validate/default.nix b/pkgs/development/libraries/gstreamer/validate/default.nix index 6677926eaa9..d973bc1f3b6 100644 --- a/pkgs/development/libraries/gstreamer/validate/default.nix +++ b/pkgs/development/libraries/gstreamer/validate/default.nix @@ -3,7 +3,7 @@ }: stdenv.mkDerivation rec { - name = "gst-validate-1.10.3"; + name = "gst-validate-1.10.4"; meta = { description = "Integration testing infrastructure for the GStreamer framework"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "${meta.homepage}/src/gst-validate/${name}.tar.xz"; - sha256 = "00icav26pj81cxdykf86rp3jw6lb178ydrqhcck43i94jdb4hsxy"; + sha256 = "0g6px08x4kq5xqlbyxvxn6cm9b1s1gfvhkmlrmvw9afccjzh1775"; }; outputs = [ "out" "dev" ]; From 8a7556961956a77a07886576fa324437c00fcb96 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 16:23:27 +0100 Subject: [PATCH 085/216] linux: 4.10 -> 4.10.1 --- pkgs/os-specific/linux/kernel/linux-4.10.nix | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/linux-4.10.nix b/pkgs/os-specific/linux/kernel/linux-4.10.nix index ff6fac2ac6d..01ee7211ba6 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.10.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.10.nix @@ -1,13 +1,12 @@ { stdenv, fetchurl, perl, buildLinux, ... } @ args: import ./generic.nix (args // rec { - version = "4.10"; + version = "4.10.1"; extraMeta.branch = "4.10"; - modDirVersion = "4.10.0"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "3c95d9f049bd085e5c346d2c77f063b8425f191460fcd3ae9fe7e94e0477dc4b"; + sha256 = "0hrmph137q4j2xfsv1fyayig47g4v8ivd2rqsw03dy7mzasnp83c"; }; kernelPatches = args.kernelPatches; From 62857b1f21b44c1d5686871c41cb06a706e7bfb4 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 16:24:49 +0100 Subject: [PATCH 086/216] linux: 4.4.51 -> 4.4.52 --- pkgs/os-specific/linux/kernel/linux-4.4.nix | 4 ++-- pkgs/top-level/all-packages.nix | 1 - 2 files changed, 2 insertions(+), 3 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix index 2366ffb7c9e..fba52eeaee5 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, perl, buildLinux, ... } @ args: import ./generic.nix (args // rec { - version = "4.4.51"; + version = "4.4.52"; extraMeta.branch = "4.4"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "04drwi5pd8m2wqq1bxr17gq9cc32x5mgl0jhs8d8f246b0faslgf"; + sha256 = "01hz3g7j1m8dis6pyy9p8pi5ixl32g6cvgav0i7a7qbkrspdvlp8"; }; kernelPatches = args.kernelPatches; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 540198d3b04..2ed964c1d49 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -11341,7 +11341,6 @@ with pkgs; kernelPatches = [ kernelPatches.bridge_stp_helper kernelPatches.cpu-cgroup-v2."4.4" - kernelPatches.DCCP_double_free_vulnerability_CVE-2017-6074 ] ++ lib.optionals ((platform.kernelArch or null) == "mips") [ kernelPatches.mips_fpureg_emu From 701544d0a785274a6d38ee894b3251b2632c2317 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 16:25:09 +0100 Subject: [PATCH 087/216] linux: 4.9.12 -> 4.9.13 --- pkgs/os-specific/linux/kernel/linux-4.9.nix | 4 ++-- pkgs/top-level/all-packages.nix | 1 - 2 files changed, 2 insertions(+), 3 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix index e31a2329c29..9290bb125f5 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, perl, buildLinux, ... } @ args: import ./generic.nix (args // rec { - version = "4.9.12"; + version = "4.9.13"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0fvq3gb80awkwsy0ir6njri2kvx52knmj86kjlm8lqwqis3m9bgw"; + sha256 = "0s52hrs3wrsa1chzgcqpxwgb5kjmpfd82i964n9d2bmk9zn4liin"; }; kernelPatches = args.kernelPatches; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 2ed964c1d49..2b12a1d2752 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -11357,7 +11357,6 @@ with pkgs; # !!! 4.7 patch doesn't apply, 4.9 patch not up yet, will keep checking # kernelPatches.cpu-cgroup-v2."4.7" kernelPatches.modinst_arg_list_too_long - kernelPatches.DCCP_double_free_vulnerability_CVE-2017-6074 ] ++ lib.optionals ((platform.kernelArch or null) == "mips") [ kernelPatches.mips_fpureg_emu From 8b5e8b3cdbd3de74cc7e7391c095c066cdda12d3 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Benno=20F=C3=BCnfst=C3=BCck?= Date: Sun, 26 Feb 2017 18:14:33 +0100 Subject: [PATCH 088/216] mod-distortion: fix package (empty $out before) `$out` wasn't expanded, so the install phase was installing to `ut/lib/v2` (because make expanded `$o` to empty). cc: @magnetophon --- pkgs/applications/audio/mod-distortion/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/applications/audio/mod-distortion/default.nix b/pkgs/applications/audio/mod-distortion/default.nix index 7b17f21b613..a1837287079 100644 --- a/pkgs/applications/audio/mod-distortion/default.nix +++ b/pkgs/applications/audio/mod-distortion/default.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { buildInputs = [ lv2 ]; - installFlags = [ "LV2_PATH=$out/lib/lv2" ]; + installFlags = [ "LV2_PATH=$(out)/lib/lv2" ]; meta = with stdenv.lib; { homepage = https://github.com/portalmod/mod-distortion; From f3a6991f3d33b9876a255b019784c0790331f728 Mon Sep 17 00:00:00 2001 From: Joachim Fasting Date: Sun, 26 Feb 2017 18:20:42 +0100 Subject: [PATCH 089/216] grsecurity: 4.9.12-201702231830 -> 4.9.13-201702261126 --- pkgs/os-specific/linux/kernel/linux-grsecurity.nix | 4 ++-- pkgs/os-specific/linux/kernel/patches.nix | 6 +++--- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/linux-grsecurity.nix b/pkgs/os-specific/linux/kernel/linux-grsecurity.nix index ad26b399a94..859385c4e99 100644 --- a/pkgs/os-specific/linux/kernel/linux-grsecurity.nix +++ b/pkgs/os-specific/linux/kernel/linux-grsecurity.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, perl, buildLinux, ... } @ args: import ./generic.nix (args // rec { - version = "4.9.12"; + version = "4.9.13"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha512 = "37riipfdm8xw53598w15l3x0gy06rmp22j1yf5wql2d1fzhgf29x007axdi7swq4jnpihd934mvpfb1sy42srkinps0x5gvv65n00bs"; + sha512 = "2mszr7n212ryaw5q2lj92766aqnjznkfr7ly04g2ggzk7cyiirrf1w37d9arzg3smn5695fb1frikacnbrmz2hsaia48kjhwgjbxn2h"; }; kernelPatches = args.kernelPatches; diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index 8ea41ff5937..a61a6c9e18a 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -95,9 +95,9 @@ rec { }; grsecurity_testing = grsecPatch - { kver = "4.9.12"; - grrev = "201702231830"; - sha512 = "1455wpdy5lizdibs86llaxf087vggl921dn83pf4cnc9fbzc5mwa46vazahv9g8467bb335vgg5fcba2i0026s1h9vcsvyy6470m4i3"; + { kver = "4.9.13"; + grrev = "201702261126"; + sha512 = "18snigndkyw372mp65v3sp9cpz8w4n3d3lzls50a3gl1qgnpp65g0vbf7vsm3spr9a5p5f17n7hl7lxgm0pqnjcgg0xr5ghkwx20z6b"; }; # This patch relaxes grsec constraints on the location of usermode helpers, From 785d303c64c8ab71b947b51e2c168db1386c95ae Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Benno=20F=C3=BCnfst=C3=BCck?= Date: Sun, 26 Feb 2017 18:23:31 +0100 Subject: [PATCH 090/216] sic: fix empty $out Make needs () around variable names, or it'll interpret $out as $o followed by `ut` --- pkgs/applications/networking/irc/sic/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/applications/networking/irc/sic/default.nix b/pkgs/applications/networking/irc/sic/default.nix index 7c13b04e670..6f48f44214c 100644 --- a/pkgs/applications/networking/irc/sic/default.nix +++ b/pkgs/applications/networking/irc/sic/default.nix @@ -4,7 +4,7 @@ stdenv.mkDerivation rec { name = "sic-${version}"; version = "1.2"; - makeFlags = "PREFIX=$out"; + makeFlags = "PREFIX=$(out)"; src = fetchurl { url = "http://dl.suckless.org/tools/sic-${version}.tar.gz"; sha256 = "ac07f905995e13ba2c43912d7a035fbbe78a628d7ba1c256f4ca1372fb565185"; From 0e06c903b51b9319609786803bbe3877a549149f Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 12:53:14 +0000 Subject: [PATCH 091/216] ocamlPackages.sexplib-113.33.00+4.03: fix version number --- pkgs/development/ocaml-modules/janestreet/sexplib-113_33_00.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/development/ocaml-modules/janestreet/sexplib-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/sexplib-113_33_00.nix index 93808a56562..4f86f080738 100644 --- a/pkgs/development/ocaml-modules/janestreet/sexplib-113_33_00.nix +++ b/pkgs/development/ocaml-modules/janestreet/sexplib-113_33_00.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg }: stdenv.mkDerivation { - name = "ocaml${ocaml.version}-sexplib-133.33.00+4.03"; + name = "ocaml${ocaml.version}-sexplib-113.33.00+4.03"; src = fetchurl { url = http://ocaml.janestreet.com/ocaml-core/113.33/files/sexplib-113.33.00+4.03.tar.gz; sha256 = "1dirdrags3z8m80z1vczfnpdfzgcvm2wyy7g61fxdr8h3jgixpl3"; From 3a9ae7e367d23f255c4dde4da7a10db69a9e8b3f Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sat, 25 Feb 2017 21:31:14 +0000 Subject: [PATCH 092/216] ocamlPackages.ppx_compare: init at 113.33.00+4.03 --- .../janestreet/ppx_compare-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_compare-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_compare-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_compare-113_33_00.nix new file mode 100644 index 00000000000..79457040202 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_compare-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_deriving, ppx_type_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_compare-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_compare-113.33.00+4.03.tar.gz; + sha256 = "07drgg6c857lsvxdjscdcb1ncdr5p3183spw32sbfcrbnr12nzys"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_type_conv ppx_deriving ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 5ad601af15d..e7354b92343 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -569,7 +569,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_type_conv-113_33_02.nix { } else callPackage ../development/ocaml-modules/janestreet/ppx-type-conv.nix {}; - ppx_compare = callPackage ../development/ocaml-modules/janestreet/ppx-compare.nix {}; + ppx_compare = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_compare-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-compare.nix {}; ppx_here = callPackage ../development/ocaml-modules/janestreet/ppx-here.nix {}; From b4abe046d7cb33a58a5b85d1ad5d09de496f6f00 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 11:07:24 +0000 Subject: [PATCH 093/216] ocamlPackages.ppx_inline_test: init at 113.33.00+4.03 --- .../janestreet/ppx_inline_test-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix new file mode 100644 index 00000000000..7b9414353a9 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_driver +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_inline_test-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_inline_test-113.33.00+4.03.tar.gz; + sha256 = "1sw71wnwznia1spicilj4bzspgdk1dhp0j4hp57a9xmsscg44i4k"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_driver ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index e7354b92343..e5d5b77d299 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -583,7 +583,10 @@ let ppx_assert = callPackage ../development/ocaml-modules/janestreet/ppx-assert.nix {}; - ppx_inline_test = callPackage ../development/ocaml-modules/janestreet/ppx-inline-test.nix {}; + ppx_inline_test = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-inline-test.nix {}; ppx_bench = callPackage ../development/ocaml-modules/janestreet/ppx-bench.nix {}; From 654dd0aa9614e352d438c4d27d586b4be8ab71d8 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 11:55:52 +0000 Subject: [PATCH 094/216] ocamlPackages.ppx_bench: init at 113.33.00+4.03 --- .../janestreet/ppx_bench-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix new file mode 100644 index 00000000000..3414324a5c8 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_inline_test +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_bench-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_bench-113.33.00+4.03.tar.gz; + sha256 = "00iv0p3cni4r7iimwm04bjg2hzvlvdb0b1kynjw2xav64xc29q01"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_inline_test ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index e5d5b77d299..9630973aec9 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -588,7 +588,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_inline_test-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-inline-test.nix {}; - ppx_bench = callPackage ../development/ocaml-modules/janestreet/ppx-bench.nix {}; + ppx_bench = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-bench.nix {}; ppx_bin_prot = callPackage ../development/ocaml-modules/janestreet/ppx-bin-prot.nix {}; From c4e5f1863147042bd10c5136156029d7fdd283ff Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 12:12:58 +0000 Subject: [PATCH 095/216] ocamlPackages.ppx_custom_printf: init at 113.33.00+4.03 --- .../ppx_custom_printf-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix new file mode 100644 index 00000000000..d75c7f81128 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_sexp_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_custom_printf-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_custom_printf-113.33.00+4.03.tar.gz; + sha256 = "1hw8q4x0hzyg3brlqpdm0bc7z6lnj6qymzw123cf51q9dq0386jb"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ ppx_sexp_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 9630973aec9..d4df47200bf 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -595,7 +595,10 @@ let ppx_bin_prot = callPackage ../development/ocaml-modules/janestreet/ppx-bin-prot.nix {}; - ppx_custom_printf = callPackage ../development/ocaml-modules/janestreet/ppx-custom-printf.nix {}; + ppx_custom_printf = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-custom-printf.nix {}; ppx_enumerate = callPackage ../development/ocaml-modules/janestreet/ppx-enumerate.nix {}; From ecc5dd55718ddab061fea93a491000fb5dc8ff84 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 12:48:16 +0000 Subject: [PATCH 096/216] ocamlPackages.ppx_enumerate: init at 113.33.00+4.03 --- .../janestreet/ppx_enumerate-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix new file mode 100644 index 00000000000..77fde21e8d7 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_deriving, ppx_type_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_enumerate-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_enumerate-113.33.00+4.03.tar.gz; + sha256 = "0b0kvdw6kids4yrzqq2h82gmnx1zfiahr82rrdbwiwkk4g0pxl93"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_deriving ppx_type_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index d4df47200bf..e94b3fc5994 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -600,7 +600,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_custom_printf-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-custom-printf.nix {}; - ppx_enumerate = callPackage ../development/ocaml-modules/janestreet/ppx-enumerate.nix {}; + ppx_enumerate = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-enumerate.nix {}; ppx_fail = callPackage ../development/ocaml-modules/janestreet/ppx-fail.nix {}; From 1aab9f884d690744d69746192e5f7f1499296ad6 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 13:05:04 +0000 Subject: [PATCH 097/216] ocamlpackages.ppx_fields_conv: init at 113.33.00+4.03 --- .../janestreet/ppx_fields_conv-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix new file mode 100644 index 00000000000..70d6ec61b0e --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, fieldslib, ppx_deriving, ppx_type_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_fields_conv-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_fields_conv-113.33.00+4.03.tar.gz; + sha256 = "1wfi8pc0y7wjiscvawhfgbcfx7ypmikmyyagwhzw7jhnldljwrkg"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ fieldslib ppx_deriving ppx_type_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index e94b3fc5994..3bfb194e20a 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -607,7 +607,10 @@ let ppx_fail = callPackage ../development/ocaml-modules/janestreet/ppx-fail.nix {}; - ppx_fields_conv = callPackage ../development/ocaml-modules/janestreet/ppx-fields-conv.nix {}; + ppx_fields_conv = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-fields-conv.nix {}; ppx_let = callPackage ../development/ocaml-modules/janestreet/ppx-let.nix {}; From 0e6e2af219934432cda971a10a1c5db88c174b68 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 13:16:03 +0000 Subject: [PATCH 098/216] ocamlPackages.ppx_variants_conv: init at 113.33.00+4.03 --- .../ppx_variants_conv-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix new file mode 100644 index 00000000000..fb8a994790c --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, variantslib, ppx_deriving, ppx_type_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_variants_conv-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_variants_conv-113.33.00+4.03.tar.gz; + sha256 = "0il0nkdwwsc1ymshj4q9nzw5ixm12ls0jj7z3q16k48bg3z5ibc0"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ variantslib ppx_deriving ppx_type_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 3bfb194e20a..d393233181d 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -622,7 +622,10 @@ let ppx_typerep_conv = callPackage ../development/ocaml-modules/janestreet/ppx-typerep-conv.nix {}; - ppx_variants_conv = callPackage ../development/ocaml-modules/janestreet/ppx-variants-conv.nix {}; + ppx_variants_conv = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-variants-conv.nix {}; ppx_expect = callPackage ../development/ocaml-modules/janestreet/ppx-expect.nix {}; From 8f74b9024fc741b4a1f1d18a486b385f71650883 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 13:43:30 +0000 Subject: [PATCH 099/216] ocamlPackages.ppx_expect: init at 113.33.01+4.03 --- .../janestreet/ppx_expect-113_33_01.nix | 22 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 26 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix b/pkgs/development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix new file mode 100644 index 00000000000..32133dfb689 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix @@ -0,0 +1,22 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_driver, ppx_assert, ppx_custom_printf, ppx_inline_test +, ppx_fields_conv, ppx_variants_conv, re, sexplib, fieldslib +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_expect-113.33.01+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_expect-113.33.01+4.03.tar.gz; + sha256 = "1r358vx3wnkzq8kwgi49400l1fx2bnl6gds4hl7s67lxsqxki2z7"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_assert ppx_custom_printf ppx_fields_conv ppx_variants_conv re ]; + propagatedBuildInputs = [ ppx_driver ppx_inline_test fieldslib sexplib ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index d393233181d..2dff5031f6f 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -627,7 +627,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_variants_conv-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-variants-conv.nix {}; - ppx_expect = callPackage ../development/ocaml-modules/janestreet/ppx-expect.nix {}; + ppx_expect = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-expect.nix {}; ppx_jane = callPackage ../development/ocaml-modules/janestreet/ppx-jane.nix {}; From cf39dba1d8293c9ba005456fb2e35c3e61c7e8f4 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 14:10:02 +0000 Subject: [PATCH 100/216] ocamlPackages.ppx_fail: init at 113.33.00+4.03 --- .../janestreet/ppx_fail-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_fail-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_fail-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_fail-113_33_00.nix new file mode 100644 index 00000000000..ba098b9294f --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_fail-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_here +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_fail-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_fail-113.33.00+4.03.tar.gz; + sha256 = "1fy1aqsylf6yk527w13rm2b20il9vy026c5ww65pj3ks5zykfvx9"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_here ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 2dff5031f6f..8cf09dc6ad3 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -605,7 +605,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_enumerate-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-enumerate.nix {}; - ppx_fail = callPackage ../development/ocaml-modules/janestreet/ppx-fail.nix {}; + ppx_fail = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_fail-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-fail.nix {}; ppx_fields_conv = if lib.versionOlder "4.03" ocaml.version From 3615c47c22846ca63ff99e3cde65f87a0dc63396 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 14:18:59 +0000 Subject: [PATCH 101/216] ocamlPackages.ppx_let: init at 113.33.00+4.03 --- .../janestreet/ppx_let-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_let-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_let-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_let-113_33_00.nix new file mode 100644 index 00000000000..b5f0bd4c932 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_let-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_driver +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_let-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_let-113.33.00+4.03.tar.gz; + sha256 = "012yzayknm9qv8ap9rbwf4fwnmx935mfy7c75ifagbnfl4lh7dmp"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ ppx_driver ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 8cf09dc6ad3..d8659335d2e 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -615,7 +615,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_fields_conv-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-fields-conv.nix {}; - ppx_let = callPackage ../development/ocaml-modules/janestreet/ppx-let.nix {}; + ppx_let = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_let-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-let.nix {}; ppx_pipebang = callPackage ../development/ocaml-modules/janestreet/ppx-pipebang.nix {}; From 758d052990c668fee6fe0d681fd3e6c41e34f74d Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 15:02:35 +0000 Subject: [PATCH 102/216] ocamlPackages.ppx_pipebang: init at 113.33.00+4.03 --- .../janestreet/ppx_pipebang-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix new file mode 100644 index 00000000000..5aa589e250c --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_tools, ppx_driver +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_pipebang-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_pipebang-113.33.00+4.03.tar.gz; + sha256 = "1rjrpbncy8vzwnmc5n0qs4dd40dmg4h75dvd7h7lm8cpxalifivc"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_driver ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index d8659335d2e..abdf50dfa48 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -620,7 +620,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_let-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-let.nix {}; - ppx_pipebang = callPackage ../development/ocaml-modules/janestreet/ppx-pipebang.nix {}; + ppx_pipebang = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-pipebang.nix {}; ppx_sexp_message = callPackage ../development/ocaml-modules/janestreet/ppx-sexp-message.nix {}; From 03be79a01872621fd36844d4958b780730643abc Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 15:15:01 +0000 Subject: [PATCH 103/216] ocamlPackages.ppx_sexp_message: init at 113.33.00+4.03 --- .../janestreet/ppx_sexp_message-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix new file mode 100644 index 00000000000..ddf66364b30 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_sexp_conv, ppx_here +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_sexp_message-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_sexp_message-113.33.00+4.03.tar.gz; + sha256 = "01vrm8dk413gh19i2y6ffpsmscjhayp3asn5hcbcflxsvlaf4klx"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ ppx_here ppx_sexp_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index abdf50dfa48..41cf9138868 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -625,7 +625,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_pipebang-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-pipebang.nix {}; - ppx_sexp_message = callPackage ../development/ocaml-modules/janestreet/ppx-sexp-message.nix {}; + ppx_sexp_message = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-sexp-message.nix {}; ppx_sexp_value = callPackage ../development/ocaml-modules/janestreet/ppx-sexp-value.nix {}; From 3c2c608c2eaa6f61b4d7a6f169f24ded0d69caf6 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 15:29:29 +0000 Subject: [PATCH 104/216] ocamlPackages.ppx_sexp_value: init at 113.33.00+4.03 --- .../janestreet/ppx_sexp_value-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix new file mode 100644 index 00000000000..21b67b9cce7 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_here, ppx_sexp_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_sexp_value-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_sexp_value-113.33.00+4.03.tar.gz; + sha256 = "0pn2v1m479lbdgprv4w9czyv5nim0hz6ailmy1xxlxlhazwbqzwm"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ ppx_sexp_conv ppx_here ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 41cf9138868..cc46350a649 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -630,7 +630,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_sexp_message-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-sexp-message.nix {}; - ppx_sexp_value = callPackage ../development/ocaml-modules/janestreet/ppx-sexp-value.nix {}; + ppx_sexp_value = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-sexp-value.nix {}; ppx_typerep_conv = callPackage ../development/ocaml-modules/janestreet/ppx-typerep-conv.nix {}; From ceabe0d3ddc0743da81c7a81697b55f13a597212 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 15:55:06 +0000 Subject: [PATCH 105/216] ocamlPackages.ppx_typerep_conv: init at 113.33.00+4.03 --- .../janestreet/ppx_typerep_conv-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_typerep_conv-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_typerep_conv-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_typerep_conv-113_33_00.nix new file mode 100644 index 00000000000..69a4ad7e69a --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_typerep_conv-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, typerep, ppx_tools, ppx_type_conv, ppx_deriving +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_typerep_conv-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_typerep_conv-113.33.00+4.03.tar.gz; + sha256 = "0k03wp07jvv3zpsm8n5hvskd5iagjvpcpxj9rpj012nia5iqfaj6"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ ppx_type_conv typerep ppx_deriving ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index cc46350a649..9b38985c7af 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -635,7 +635,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_sexp_value-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-sexp-value.nix {}; - ppx_typerep_conv = callPackage ../development/ocaml-modules/janestreet/ppx-typerep-conv.nix {}; + ppx_typerep_conv = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_typerep_conv-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-typerep-conv.nix {}; ppx_variants_conv = if lib.versionOlder "4.03" ocaml.version From 68998dca58900a89eb63ce3931227cfa5a0eccf0 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 16:03:43 +0000 Subject: [PATCH 106/216] ocamlPackages.ppx_bin_prot: init at 113.33.00+4.03 --- .../janestreet/ppx_bin_prot-113_33_00.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 ++++- 2 files changed, 25 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_bin_prot-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_bin_prot-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_bin_prot-113_33_00.nix new file mode 100644 index 00000000000..43517a82d3b --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_bin_prot-113_33_00.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, bin_prot, ppx_deriving, ppx_tools, ppx_type_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_bin_prot-113.33.00+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_bin_prot-113.33.00+4.03.tar.gz; + sha256 = "1xw1yjgnd5ny1cq0n6rbsdaywyzq2n0jwg4gjsxv14dhv0alav36"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_tools ]; + propagatedBuildInputs = [ bin_prot ppx_deriving ppx_type_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 9b38985c7af..b2760955326 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -593,7 +593,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_bench-113_33_00.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-bench.nix {}; - ppx_bin_prot = callPackage ../development/ocaml-modules/janestreet/ppx-bin-prot.nix {}; + ppx_bin_prot = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_bin_prot-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-bin-prot.nix {}; ppx_custom_printf = if lib.versionOlder "4.03" ocaml.version From 1f1a950cb072c7f01f6bcc4fb47cf81f1552747c Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 16:43:23 +0000 Subject: [PATCH 107/216] ocamlPackages.ppx_jane: init at 113.33.00 --- .../janestreet/ppx_jane-113_33_00.nix | 24 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 5 +++- 2 files changed, 28 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/ppx_jane-113_33_00.nix diff --git a/pkgs/development/ocaml-modules/janestreet/ppx_jane-113_33_00.nix b/pkgs/development/ocaml-modules/janestreet/ppx_jane-113_33_00.nix new file mode 100644 index 00000000000..0a5b19051fc --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/ppx_jane-113_33_00.nix @@ -0,0 +1,24 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_assert, ppx_bench, ppx_bin_prot, ppx_custom_printf, ppx_enumerate, ppx_expect, ppx_fail, ppx_fields_conv, ppx_let, ppx_pipebang, ppx_sexp_message, ppx_sexp_value, ppx_typerep_conv, ppx_variants_conv +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-ppx_jane-113.33.00"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/ppx_jane-113.33.00.tar.gz; + sha256 = "15lbrc9jj83k208gv7knz7mk9xh9mdb657jdjb1006gdsskfmra6"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ]; + propagatedBuildInputs = [ ppx_assert ppx_bench ppx_bin_prot + ppx_custom_printf ppx_enumerate ppx_expect ppx_fail ppx_fields_conv + ppx_let ppx_pipebang ppx_sexp_message ppx_sexp_value ppx_typerep_conv + ppx_variants_conv ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index b2760955326..da4d631013f 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -653,7 +653,10 @@ let then callPackage ../development/ocaml-modules/janestreet/ppx_expect-113_33_01.nix {} else callPackage ../development/ocaml-modules/janestreet/ppx-expect.nix {}; - ppx_jane = callPackage ../development/ocaml-modules/janestreet/ppx-jane.nix {}; + ppx_jane = + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/ppx_jane-113_33_00.nix {} + else callPackage ../development/ocaml-modules/janestreet/ppx-jane.nix {}; # Core sublibs From 0a768bd6c8d19f8f3ed02772ed11cda0e8f91320 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 17:29:01 +0000 Subject: [PATCH 108/216] ocamlPackages.core_kernel: init at 113.33.01+4.03 --- .../janestreet/core_kernel-113_33_01.nix | 25 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 4 ++- 2 files changed, 28 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/core_kernel-113_33_01.nix diff --git a/pkgs/development/ocaml-modules/janestreet/core_kernel-113_33_01.nix b/pkgs/development/ocaml-modules/janestreet/core_kernel-113_33_01.nix new file mode 100644 index 00000000000..d6da9caed7d --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/core_kernel-113_33_01.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg, ppx_jane +, bin_prot, fieldslib, typerep, variantslib +, ppx_assert, ppx_bench, ppx_expect, ppx_inline_test +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-core_kernel-113.33.01+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/core_kernel-113.33.01+4.03.tar.gz; + sha256 = "0ra2frspqjqk1wbb58lrb0anrgsyhja00zsybka85qy71lblamfs"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_jane ]; + propagatedBuildInputs = [ + bin_prot fieldslib typerep variantslib + ppx_assert ppx_bench ppx_expect ppx_inline_test + ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index da4d631013f..5bd8c955736 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -688,7 +688,9 @@ let else bin_prot_p4; core_kernel = - if lib.versionOlder "4.02" ocaml.version + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/core_kernel-113_33_01.nix {} + else if lib.versionOlder "4.02" ocaml.version then callPackage ../development/ocaml-modules/janestreet/core_kernel.nix {} else core_kernel_p4; From 8e1b4b3c4c372c07347eb9106615c8791bcc753b Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 17:42:02 +0000 Subject: [PATCH 109/216] ocamlPackages.core: init at 113.33.02+4.03 --- .../janestreet/core-113_33_02.nix | 21 +++++++++++++++++++ pkgs/top-level/ocaml-packages.nix | 4 +++- 2 files changed, 24 insertions(+), 1 deletion(-) create mode 100644 pkgs/development/ocaml-modules/janestreet/core-113_33_02.nix diff --git a/pkgs/development/ocaml-modules/janestreet/core-113_33_02.nix b/pkgs/development/ocaml-modules/janestreet/core-113_33_02.nix new file mode 100644 index 00000000000..48bafd5c3c5 --- /dev/null +++ b/pkgs/development/ocaml-modules/janestreet/core-113_33_02.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl, ocaml, findlib, ocamlbuild, opam, topkg +, ppx_jane, core_kernel +}: + +stdenv.mkDerivation { + name = "ocaml${ocaml.version}-core-113.33.02+4.03"; + src = fetchurl { + url = http://ocaml.janestreet.com/ocaml-core/113.33/files/core-113.33.02+4.03.tar.gz; + sha256 = "1gvd5saa0sdgyv9w09imqlkw0c21v2ixic8fxx14jxrwck0zn4bc"; + }; + + buildInputs = [ ocaml findlib ocamlbuild opam ppx_jane ]; + propagatedBuildInputs = [ core_kernel ]; + + inherit (topkg) installPhase; + + meta = { + license = stdenv.lib.licenses.asl20; + inherit (ocaml.meta) platforms; + }; +} diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 5bd8c955736..4f5d2929562 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -695,7 +695,9 @@ let else core_kernel_p4; core = - if lib.versionOlder "4.02" ocaml.version + if lib.versionOlder "4.03" ocaml.version + then callPackage ../development/ocaml-modules/janestreet/core-113_33_02.nix {} + else if lib.versionOlder "4.02" ocaml.version then callPackage ../development/ocaml-modules/janestreet/core.nix {} else core_p4; From 8fcd1a063e2564d0f337a41a7db3cd49f5fb031f Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 19:09:29 +0100 Subject: [PATCH 110/216] faac: fix build with glibc-2.25 Use patches from Arch to really build against the provided external mp4v2 library. --- pkgs/development/libraries/faac/default.nix | 20 ++++++++++++++++++-- 1 file changed, 18 insertions(+), 2 deletions(-) diff --git a/pkgs/development/libraries/faac/default.nix b/pkgs/development/libraries/faac/default.nix index 1ab01033f4d..abbe07224b5 100644 --- a/pkgs/development/libraries/faac/default.nix +++ b/pkgs/development/libraries/faac/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl +{ stdenv, fetchurl, fetchpatch, autoreconfHook , mp4v2Support ? true, mp4v2 ? null , drmSupport ? false # Digital Radio Mondiale }: @@ -15,12 +15,28 @@ stdenv.mkDerivation rec { sha256 = "1pqr7nf6p2r283n0yby2czd3iy159gz8rfinkis7vcfgyjci2565"; }; + patches = [ + (fetchpatch { + name = "faac-mp4v2-1.9.patch"; + url = "https://git.archlinux.org/svntogit/packages.git/plain/trunk/mp4v2-1.9.patch?h=packages/faac"; + sha256 = "1pja822zw9q3cg8bjkw5z0bpxsk4q92qix26zpiqbvi7vg314hyc"; + }) + (fetchpatch { + name = "faac-mp4v2-2.0.0.patch"; + url = "https://git.archlinux.org/svntogit/packages.git/plain/trunk/mp4v2-2.0.0.patch?h=packages/faac"; + sha256 = "07kmkrl0600rs01xqpkkw9n8p1215n485xqf8hwimp60dw3vc0wn"; + addPrefixes = true; + }) + ]; + configureFlags = [ ] - ++ optional mp4v2Support "--with-mp4v2" + ++ optional mp4v2Support "--with-external-mp4v2" ++ optional drmSupport "--enable-drm"; hardeningDisable = [ "format" ]; + nativeBuildInputs = [ autoreconfHook ]; + buildInputs = [ ] ++ optional mp4v2Support mp4v2; From daaf8179246705fbfbfe47e5aca3d75a57bd4b2f Mon Sep 17 00:00:00 2001 From: obadz Date: Sun, 26 Feb 2017 18:27:52 +0000 Subject: [PATCH 111/216] SpaceFM: (optionally) remove dependency on ifuse due to broken dep CVEs in libplist prevent ifuse from building (see 30cea5f022) --- pkgs/applications/misc/spacefm/default.nix | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/pkgs/applications/misc/spacefm/default.nix b/pkgs/applications/misc/spacefm/default.nix index 74466d667b3..f4e1eef2836 100644 --- a/pkgs/applications/misc/spacefm/default.nix +++ b/pkgs/applications/misc/spacefm/default.nix @@ -1,6 +1,6 @@ { pkgs, fetchFromGitHub, stdenv, gtk3, udev, desktop_file_utils , shared_mime_info, intltool, pkgconfig, wrapGAppsHook, ffmpegthumbnailer -, jmtpfs, ifuse, lsof, udisks, hicolor_icon_theme, adwaita-icon-theme }: +, jmtpfs, ifuseSupport ? false, ifuse ? null, lsof, udisks, hicolor_icon_theme, adwaita-icon-theme }: stdenv.mkDerivation rec { name = "spacefm-${version}"; @@ -28,8 +28,10 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 udev desktop_file_utils shared_mime_info intltool pkgconfig - wrapGAppsHook ffmpegthumbnailer jmtpfs ifuse lsof udisks - ]; + wrapGAppsHook ffmpegthumbnailer jmtpfs lsof udisks + ] ++ (if ifuseSupport then [ ifuse ] else []); + # Introduced because ifuse doesn't build due to CVEs in libplist + # Revert when libplist builds again… meta = with stdenv.lib; { description = "A multi-panel tabbed file manager"; From edcbb6da11f5dc608aecc2c0ae81c27bf0c0f1d0 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 19:36:04 +0100 Subject: [PATCH 112/216] pass: 1.6.5 -> 1.7 --- pkgs/tools/security/pass/default.nix | 27 +++++++-------- pkgs/tools/security/pass/program-name.patch | 13 -------- .../set-correct-program-name-for-sleep.patch | 33 ------------------- 3 files changed, 12 insertions(+), 61 deletions(-) delete mode 100644 pkgs/tools/security/pass/program-name.patch delete mode 100644 pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch diff --git a/pkgs/tools/security/pass/default.nix b/pkgs/tools/security/pass/default.nix index b0137619f0c..58a7cc30059 100644 --- a/pkgs/tools/security/pass/default.nix +++ b/pkgs/tools/security/pass/default.nix @@ -1,28 +1,27 @@ -{ stdenv, fetchurl -, coreutils, gnused, getopt, pwgen, git, tree, gnupg, which, procps +{ stdenv, lib, fetchurl +, coreutils, gnused, getopt, git, tree, gnupg, which, procps, qrencode , makeWrapper , xclip ? null, xdotool ? null, dmenu ? null , x11Support ? !stdenv.isDarwin }: +with lib; + assert x11Support -> xclip != null && xdotool != null && dmenu != null; stdenv.mkDerivation rec { - version = "1.6.5"; + version = "1.7"; name = "password-store-${version}"; src = fetchurl { url = "http://git.zx2c4.com/password-store/snapshot/${name}.tar.xz"; - sha256 = "05bk3lrp5jwg0v338lvylp7glpliydzz4jf5pjr6k3kagrv3jyik"; + sha256 = "002mw7j0m33bw483rllzhcf41wp3ixka8yma6kqrfaj57jyw66hn"; }; - patches = - [ ./program-name.patch - ./set-correct-program-name-for-sleep.patch - ] ++ stdenv.lib.optional stdenv.isDarwin ./no-darwin-getopt.patch; + patches = stdenv.lib.optional stdenv.isDarwin ./no-darwin-getopt.patch; buildInputs = [ makeWrapper ]; @@ -30,7 +29,7 @@ stdenv.mkDerivation rec { description = "Stores, retrieves, generates, and synchronizes passwords securely"; homepage = http://www.passwordstore.org/; license = licenses.gpl2Plus; - maintainers = with maintainers; [ lovek323 the-kenny ]; + maintainers = with maintainers; [ lovek323 the-kenny fpletz ]; platforms = platforms.unix; longDescription = '' @@ -56,10 +55,8 @@ stdenv.mkDerivation rec { # himself. mkdir -p "$out/share/emacs/site-lisp" cp "contrib/emacs/password-store.el" "$out/share/emacs/site-lisp/" - - ${if x11Support then '' - cp "contrib/dmenu/passmenu" "$out/bin/" - '' else ""} + '' + optionalString x11Support '' + cp "contrib/dmenu/passmenu" "$out/bin/" ''; wrapperPath = with stdenv.lib; makeBinPath ([ @@ -68,16 +65,16 @@ stdenv.mkDerivation rec { git gnupg gnused - pwgen tree which + qrencode ] ++ stdenv.lib.optional stdenv.isLinux procps ++ ifEnable x11Support [ dmenu xclip xdotool ]); postFixup = '' # Fix program name in --help substituteInPlace $out/bin/pass \ - --replace "\$program" "pass" + --replace 'PROGRAM="''${0##*/}"' "PROGRAM=pass" # Ensure all dependencies are in PATH wrapProgram $out/bin/pass \ diff --git a/pkgs/tools/security/pass/program-name.patch b/pkgs/tools/security/pass/program-name.patch deleted file mode 100644 index db01942f638..00000000000 --- a/pkgs/tools/security/pass/program-name.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/password-store.sh b/src/password-store.sh -index 6313384..6607a98 100755 ---- a/src/password-store.sh -+++ b/src/password-store.sh -@@ -573,7 +573,7 @@ cmd_git() { - # END subcommand functions - # - --PROGRAM="${0##*/}" -+PROGRAM="pass" - COMMAND="$1" - - case "$1" in diff --git a/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch b/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch deleted file mode 100644 index f00307307eb..00000000000 --- a/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch +++ /dev/null @@ -1,33 +0,0 @@ -From 6ad29ae97263060c9ec95856e0d8ab18409108c0 Mon Sep 17 00:00:00 2001 -From: Franz Pletz -Date: Sat, 3 Sep 2016 05:45:36 +0200 -Subject: [PATCH] Set correct program name for sleep - ---- - src/password-store.sh | 7 +++++-- - 1 file changed, 5 insertions(+), 2 deletions(-) - -diff --git a/src/password-store.sh b/src/password-store.sh -index 63be840..ca47df3 100755 ---- a/src/password-store.sh -+++ b/src/password-store.sh -@@ -133,11 +133,14 @@ clip() { - # variable. Specifically, it cannot store nulls nor (non-trivally) store - # trailing new lines. - local sleep_argv0="password store sleep on display $DISPLAY" -- pkill -f "^$sleep_argv0" 2>/dev/null && sleep 0.5 -+ pkill -P $(pgrep -f "^$sleep_argv0") 2>/dev/null && sleep 0.5 - local before="$(xclip -o -selection "$X_SELECTION" 2>/dev/null | base64)" - echo -n "$1" | xclip -selection "$X_SELECTION" || die "Error: Could not copy data to the clipboard" - ( -- ( exec -a "$sleep_argv0" sleep "$CLIP_TIME" ) -+ # Execute sleep as a child process of bash because it may be -+ # a symlink to a single binary version of coreutils or busybox -+ # which depends on argv0 correctly set to "sleep" -+ ( exec -a "$sleep_argv0" bash <(echo sleep "$CLIP_TIME") ) - local now="$(xclip -o -selection "$X_SELECTION" | base64)" - [[ $now != $(echo -n "$1" | base64) ]] && before="$now" - --- -2.9.3 - From 6cc50b29763a6afdbd4e375256a08be1d40765be Mon Sep 17 00:00:00 2001 From: Benjamin Herr Date: Sun, 26 Feb 2017 19:26:16 +0100 Subject: [PATCH 113/216] obconf: add libSM to fix build --- pkgs/tools/X11/obconf/default.nix | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/pkgs/tools/X11/obconf/default.nix b/pkgs/tools/X11/obconf/default.nix index cb3749efb44..49bab143fc2 100644 --- a/pkgs/tools/X11/obconf/default.nix +++ b/pkgs/tools/X11/obconf/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk2, libglade, openbox, - imlib2, libstartup_notification, makeWrapper }: + imlib2, libstartup_notification, makeWrapper, libSM }: stdenv.mkDerivation rec { name = "obconf-${version}"; @@ -11,7 +11,8 @@ stdenv.mkDerivation rec { }; buildInputs = [ - pkgconfig gtk2 libglade openbox imlib2 libstartup_notification makeWrapper + pkgconfig gtk2 libglade libSM openbox imlib2 libstartup_notification + makeWrapper ]; postInstall = '' From 9dbeca2240591bf690b5bce6b8fb57a2521b6c80 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 20:54:58 +0100 Subject: [PATCH 114/216] pass: refactor, fix completions install cc #23223 --- pkgs/tools/security/pass/default.nix | 42 ++++++++++++---------------- 1 file changed, 18 insertions(+), 24 deletions(-) diff --git a/pkgs/tools/security/pass/default.nix b/pkgs/tools/security/pass/default.nix index 58a7cc30059..62f1a3a05dd 100644 --- a/pkgs/tools/security/pass/default.nix +++ b/pkgs/tools/security/pass/default.nix @@ -23,31 +23,9 @@ stdenv.mkDerivation rec { patches = stdenv.lib.optional stdenv.isDarwin ./no-darwin-getopt.patch; - buildInputs = [ makeWrapper ]; + nativeBuildInputs = [ makeWrapper ]; - meta = with stdenv.lib; { - description = "Stores, retrieves, generates, and synchronizes passwords securely"; - homepage = http://www.passwordstore.org/; - license = licenses.gpl2Plus; - maintainers = with maintainers; [ lovek323 the-kenny fpletz ]; - platforms = platforms.unix; - - longDescription = '' - pass is a very simple password store that keeps passwords inside gpg2 - encrypted files inside a simple directory tree residing at - ~/.password-store. The pass utility provides a series of commands for - manipulating the password store, allowing the user to add, remove, edit, - synchronize, generate, and manipulate passwords. - ''; - }; - - preInstall = '' - mkdir -p "$out/share/bash-completion/completions" - mkdir -p "$out/share/zsh/site-functions" - mkdir -p "$out/share/fish/vendor_completions.d" - ''; - - installFlags = [ "PREFIX=$(out)" ]; + installFlags = [ "PREFIX=$(out)" "WITH_ALLCOMP=yes" ]; postInstall = '' # Install Emacs Mode. NOTE: We can't install the necessary @@ -85,4 +63,20 @@ stdenv.mkDerivation rec { wrapProgram $out/bin/passmenu \ --prefix PATH : "$out/bin:${wrapperPath}" ''; + + meta = with stdenv.lib; { + description = "Stores, retrieves, generates, and synchronizes passwords securely"; + homepage = http://www.passwordstore.org/; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ lovek323 the-kenny fpletz ]; + platforms = platforms.unix; + + longDescription = '' + pass is a very simple password store that keeps passwords inside gpg2 + encrypted files inside a simple directory tree residing at + ~/.password-store. The pass utility provides a series of commands for + manipulating the password store, allowing the user to add, remove, edit, + synchronize, generate, and manipulate passwords. + ''; + }; } From b2a4eb839a530f84a0b522840a6a4cac51adcba1 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Sun, 26 Feb 2017 21:18:02 +0100 Subject: [PATCH 115/216] =?UTF-8?q?ppx=5Ftools,=20camlp4,=20ocamlify,=20oc?= =?UTF-8?q?amlmod:=20don=E2=80=99t=20strip=20binaries?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- pkgs/development/ocaml-modules/ppx_tools/default.nix | 2 ++ pkgs/development/tools/ocaml/camlp4/default.nix | 2 ++ pkgs/development/tools/ocaml/ocamlify/default.nix | 2 ++ pkgs/development/tools/ocaml/ocamlmod/default.nix | 2 ++ 4 files changed, 8 insertions(+) diff --git a/pkgs/development/ocaml-modules/ppx_tools/default.nix b/pkgs/development/ocaml-modules/ppx_tools/default.nix index 62aa97de5fa..ddc3dec898d 100644 --- a/pkgs/development/ocaml-modules/ppx_tools/default.nix +++ b/pkgs/development/ocaml-modules/ppx_tools/default.nix @@ -26,6 +26,8 @@ in createFindlibDestdir = true; + dontStrip = true; + meta = with stdenv.lib; { description = "Tools for authors of ppx rewriters"; homepage = http://www.lexifi.com/ppx_tools; diff --git a/pkgs/development/tools/ocaml/camlp4/default.nix b/pkgs/development/tools/ocaml/camlp4/default.nix index a257a88287c..cedd35ae6ad 100644 --- a/pkgs/development/tools/ocaml/camlp4/default.nix +++ b/pkgs/development/tools/ocaml/camlp4/default.nix @@ -43,6 +43,8 @@ stdenv.mkDerivation rec { installTargets = "install install-META"; + dontStrip = true; + meta = with stdenv.lib; { description = "A software system for writing extensible parsers for programming languages"; homepage = https://github.com/ocaml/camlp4; diff --git a/pkgs/development/tools/ocaml/ocamlify/default.nix b/pkgs/development/tools/ocaml/ocamlify/default.nix index d5dd0c19d98..2876464ab50 100644 --- a/pkgs/development/tools/ocaml/ocamlify/default.nix +++ b/pkgs/development/tools/ocaml/ocamlify/default.nix @@ -14,6 +14,8 @@ stdenv.mkDerivation { buildPhase = "ocaml setup.ml -build"; installPhase = "ocaml setup.ml -install"; + dontStrip = true; + meta = { homepage = http://forge.ocamlcore.org/projects/ocamlmod/ocamlmod; description = "Generate OCaml modules from source files"; diff --git a/pkgs/development/tools/ocaml/ocamlmod/default.nix b/pkgs/development/tools/ocaml/ocamlmod/default.nix index 0b92a45153c..b24be7ba628 100644 --- a/pkgs/development/tools/ocaml/ocamlmod/default.nix +++ b/pkgs/development/tools/ocaml/ocamlmod/default.nix @@ -15,6 +15,8 @@ stdenv.mkDerivation rec { buildPhase = "ocaml setup.ml -build"; installPhase = "ocaml setup.ml -install"; + dontStrip = true; + meta = { homepage = http://forge.ocamlcore.org/projects/ocamlmod/ocamlmod; description = "Generate OCaml modules from source files"; From 5670d96bbc871ebfd20cb2fa3cfa4d72e0c84717 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Sun, 26 Feb 2017 21:25:40 +0100 Subject: [PATCH 116/216] pythonPackages.libasyncns: fix build with glibc-2.25 --- .../{libasyncns.nix => libasyncns/default.nix} | 2 ++ .../libasyncns/libasyncns-fix-res-consts.patch | 14 ++++++++++++++ pkgs/top-level/python-packages.nix | 2 +- 3 files changed, 17 insertions(+), 1 deletion(-) rename pkgs/development/python-modules/{libasyncns.nix => libasyncns/default.nix} (93%) create mode 100644 pkgs/development/python-modules/libasyncns/libasyncns-fix-res-consts.patch diff --git a/pkgs/development/python-modules/libasyncns.nix b/pkgs/development/python-modules/libasyncns/default.nix similarity index 93% rename from pkgs/development/python-modules/libasyncns.nix rename to pkgs/development/python-modules/libasyncns/default.nix index de0d6ea610d..63bcad285c4 100644 --- a/pkgs/development/python-modules/libasyncns.nix +++ b/pkgs/development/python-modules/libasyncns/default.nix @@ -10,6 +10,8 @@ buildPythonPackage rec { sha256 = "1q4l71b2h9q756x4pjynp6kczr2d8c1jvbdp982hf7xzv7w5gxqg"; }; + patches = [ ./libasyncns-fix-res-consts.patch ]; + buildInputs = [ libasyncns ]; nativeBuildInputs = [ pkgconfig ]; doCheck = false; # requires network access diff --git a/pkgs/development/python-modules/libasyncns/libasyncns-fix-res-consts.patch b/pkgs/development/python-modules/libasyncns/libasyncns-fix-res-consts.patch new file mode 100644 index 00000000000..62877300a27 --- /dev/null +++ b/pkgs/development/python-modules/libasyncns/libasyncns-fix-res-consts.patch @@ -0,0 +1,14 @@ +diff --git a/libasyncns.c b/libasyncns.c +index 99a73de..85709b0 100644 +--- a/libasyncns.c ++++ b/libasyncns.c +@@ -134,9 +134,8 @@ PyMODINIT_FUNC initlibasyncns(void) + ADDNSCONST(ns_t_mailb); + ADDNSCONST(ns_t_maila); + ADDNSCONST(ns_t_any); +- ADDNSCONST(ns_t_zxfr); + ADDNSCONST(ns_t_max); + + ADDNSCONST(ns_c_invalid); + ADDNSCONST(ns_c_in); + ADDNSCONST(ns_c_2); diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index b5c8c2c50d2..3944e48607c 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -28176,7 +28176,7 @@ EOF buildInputs = with self; [ pytest pkgs.glibcLocales ]; }; - libasyncns = callPackage ../development/python-modules/libasyncns.nix { + libasyncns = callPackage ../development/python-modules/libasyncns { inherit (pkgs) libasyncns pkgconfig; }; From 392331ad58a6b5f9164ca59e3e70f3c56d476e16 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 21:17:43 +0100 Subject: [PATCH 117/216] pythonPackages.gst-python: fix source hash Commit 5e937b173d4f6b9e90784e65c886e7e0f3798817 ("gstreamer: 1.10.3 -> 1.10.4 for multiple CVEs") bumped the version but not the hash. --- pkgs/development/libraries/gstreamer/python/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/development/libraries/gstreamer/python/default.nix b/pkgs/development/libraries/gstreamer/python/default.nix index 09c11282058..4c3cdd90127 100644 --- a/pkgs/development/libraries/gstreamer/python/default.nix +++ b/pkgs/development/libraries/gstreamer/python/default.nix @@ -13,7 +13,7 @@ in stdenv.mkDerivation rec { "${meta.homepage}/src/gst-python/${name}.tar.xz" "mirror://gentoo/distfiles/${name}.tar.xz" ]; - sha256 = "bdfa2d07dfe0ce68f638b04fed6890db506416c1dcf1279e83458269d719a4e8"; + sha256 = "04l2hvvz9b0f3nyds1k3yfk5di8a91fpr6maj19c11mwp1s82l2r"; }; patches = [ ./different-path-with-pygobject.patch ]; From 7611525c008408be64b99e5b0517820cc578bde8 Mon Sep 17 00:00:00 2001 From: Tim Steinbach Date: Sat, 25 Feb 2017 08:56:58 -0500 Subject: [PATCH 118/216] git: 2.11.1 -> 2.12.0 --- .../version-management/git-and-tools/git/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/applications/version-management/git-and-tools/git/default.nix b/pkgs/applications/version-management/git-and-tools/git/default.nix index c93015678e2..af5fc8a8be4 100644 --- a/pkgs/applications/version-management/git-and-tools/git/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git/default.nix @@ -11,7 +11,7 @@ }: let - version = "2.11.1"; + version = "2.12.0"; svn = subversionClient.override { perlBindings = true; }; in @@ -20,7 +20,7 @@ stdenv.mkDerivation { src = fetchurl { url = "https://www.kernel.org/pub/software/scm/git/git-${version}.tar.xz"; - sha256 = "05b4jw86w77c3pyh3nm6aw31vhxwzvhnx2x0bcfqmm15wg57k9y0"; + sha256 = "09r0lcjj5v2apj39f0ziqzjq2bi1jpnhszc9q4n0ab86g5j7c88q"; }; hardeningDisable = [ "format" ]; From 8beee1ec2d4103452025efca43e4eb84688786bb Mon Sep 17 00:00:00 2001 From: Gabriel Gonzalez Date: Sun, 26 Feb 2017 13:21:35 -0800 Subject: [PATCH 119/216] Fix `pkgs.haskellPackages.gtk` build Haskell's `gtk` package requires the `have-quartz-gtk` flag to be built on OS X when using the Quartz backend --- pkgs/development/haskell-modules/configuration-common.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix index d9bdf46c0b6..fc0edb9e6f3 100644 --- a/pkgs/development/haskell-modules/configuration-common.nix +++ b/pkgs/development/haskell-modules/configuration-common.nix @@ -689,6 +689,10 @@ self: super: { # Tools that use gtk2hs-buildtools now depend on them in a custom-setup stanza cairo = addBuildTool super.cairo self.gtk2hs-buildtools; pango = disableHardening (addBuildTool super.pango self.gtk2hs-buildtools) ["fortify"]; + gtk = + if pkgs.stdenv.isDarwin + then appendConfigureFlag super.gtk "-fhave-quartz-gtk" + else super.gtk; # https://github.com/commercialhaskell/stack/issues/3001 stack = doJailbreak super.stack; From 442b589b71132f593de9ec5725c1b4cca2cab065 Mon Sep 17 00:00:00 2001 From: Joachim Fasting Date: Sun, 26 Feb 2017 21:04:58 +0100 Subject: [PATCH 120/216] webkitgtk24x: mark as insecure See https://github.com/NixOS/nixpkgs/issues/18312 --- pkgs/development/libraries/webkitgtk/2.4.nix | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/pkgs/development/libraries/webkitgtk/2.4.nix b/pkgs/development/libraries/webkitgtk/2.4.nix index 1db47827abe..33f8fa64a0f 100644 --- a/pkgs/development/libraries/webkitgtk/2.4.nix +++ b/pkgs/development/libraries/webkitgtk/2.4.nix @@ -23,6 +23,13 @@ stdenv.mkDerivation rec { license = licenses.bsd2; platforms = with platforms; linux ++ darwin; maintainers = []; + knownVulnerabilities = [ + "WSA-2016-0004" + "WSA-2016-0005" + "WSA-2016-0006" + "WSA-2017-0001" + "WSA-2017-0002" + ]; }; src = fetchurl { From 78d9414ce534e570853fa3b7920c0906db9f169b Mon Sep 17 00:00:00 2001 From: Tuomas Tynkkynen Date: Mon, 27 Feb 2017 00:04:29 +0200 Subject: [PATCH 121/216] findutils: Fix cross compilation Yes, setting crossAttrs.propagatedBuildInputs is the correct value to set to override a buildInputs from the native drv! --- pkgs/tools/misc/findutils/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/tools/misc/findutils/default.nix b/pkgs/tools/misc/findutils/default.nix index 8bedbeb12fe..f1090bcf457 100644 --- a/pkgs/tools/misc/findutils/default.nix +++ b/pkgs/tools/misc/findutils/default.nix @@ -18,8 +18,8 @@ stdenv.mkDerivation rec { outputs = [ "out" "info" ]; crossAttrs = { - # http://osdir.com/ml/bug-findutils-gnu/2009-08/msg00026.html - configureFlags = [ "gl_cv_func_wcwidth_works=yes" ]; + # Fix the 'buildInputs = [ coreutils ]' above - that adds the cross coreutils to PATH :( + propagatedBuildInputs = [ ]; }; enableParallelBuilding = true; From ae67f060f28028c31b091460167bb598bd8d3e6d Mon Sep 17 00:00:00 2001 From: Fabian Schmitthenner Date: Sun, 26 Feb 2017 13:29:46 +0100 Subject: [PATCH 122/216] phpfpm: eliminate build at evaluation time phpfpm currently uses `readFile` to read the php.ini file from the phpPackage. This causes php to be build at evaluation time. This eliminates the use of readFile and builds the php.ini at build time. --- nixos/modules/services/web-servers/phpfpm/default.nix | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/nixos/modules/services/web-servers/phpfpm/default.nix b/nixos/modules/services/web-servers/phpfpm/default.nix index ed537e7122a..2471a06a3b0 100644 --- a/nixos/modules/services/web-servers/phpfpm/default.nix +++ b/nixos/modules/services/web-servers/phpfpm/default.nix @@ -24,10 +24,11 @@ let ${concatStringsSep "\n" (mapAttrsToList (n: v: "[${n}]\n${v}") cfg.poolConfigs)} ''; - phpIni = pkgs.writeText "php.ini" '' - ${readFile "${cfg.phpPackage}/etc/php.ini"} - - ${cfg.phpOptions} + phpIni = pkgs.runCommand "php.ini" { + inherit (cfg) phpPackage phpOptions; + passAsFile = [ "phpOptions" ]; + } '' + cat $phpPackage/etc/php.ini $phpOptionsFile > $out ''; in { From 1ba97d6ee9795b8c9c6ff25b0baaf988be561781 Mon Sep 17 00:00:00 2001 From: Charles Strahan Date: Mon, 27 Feb 2017 02:10:34 -0500 Subject: [PATCH 123/216] ghcjsHEAD: unbreak --- pkgs/development/compilers/ghcjs/base.nix | 3 ++- pkgs/development/compilers/ghcjs/default.nix | 5 ++++- 2 files changed, 6 insertions(+), 2 deletions(-) diff --git a/pkgs/development/compilers/ghcjs/base.nix b/pkgs/development/compilers/ghcjs/base.nix index 393278be49e..130c9995c8d 100644 --- a/pkgs/development/compilers/ghcjs/base.nix +++ b/pkgs/development/compilers/ghcjs/base.nix @@ -1,4 +1,5 @@ { mkDerivation +, broken ? false , test-framework , test-framework-hunit , test-framework-quickcheck2 @@ -183,5 +184,5 @@ in mkDerivation (rec { license = stdenv.lib.licenses.bsd3; platforms = ghc.meta.platforms; maintainers = with stdenv.lib.maintainers; [ jwiegley cstrahan ]; - broken = true; # http://hydra.nixos.org/build/45110274 + inherit broken; }) diff --git a/pkgs/development/compilers/ghcjs/default.nix b/pkgs/development/compilers/ghcjs/default.nix index 7400057b128..eda724e5947 100644 --- a/pkgs/development/compilers/ghcjs/default.nix +++ b/pkgs/development/compilers/ghcjs/default.nix @@ -1,3 +1,6 @@ { bootPkgs }: -bootPkgs.callPackage ./base.nix { inherit bootPkgs; } +bootPkgs.callPackage ./base.nix { + inherit bootPkgs; + broken = true; # http://hydra.nixos.org/build/45110274 +} From 0680289ef8e3d81198d89a4ff6c89a04901cac92 Mon Sep 17 00:00:00 2001 From: zraexy Date: Fri, 24 Feb 2017 08:10:12 -0900 Subject: [PATCH 124/216] qsyncthingtray: 0.5.5rc2 -> 0.5.7 --- pkgs/applications/misc/qsyncthingtray/default.nix | 8 ++------ 1 file changed, 2 insertions(+), 6 deletions(-) diff --git a/pkgs/applications/misc/qsyncthingtray/default.nix b/pkgs/applications/misc/qsyncthingtray/default.nix index 96d2aa0c85b..ba8b946f3fb 100644 --- a/pkgs/applications/misc/qsyncthingtray/default.nix +++ b/pkgs/applications/misc/qsyncthingtray/default.nix @@ -3,14 +3,14 @@ , qmakeHook }: stdenv.mkDerivation rec { - version = "0.5.5rc2"; + version = "0.5.7"; name = "qsyncthingtray-${version}"; src = fetchFromGitHub { owner = "sieren"; repo = "QSyncthingTray"; rev = "${version}"; - sha256 = "1x7j7ylgm4ih06m7gb5ls3c9bdjwbra675489caq2f04kgw4yxq2"; + sha256 = "0crrdpdmlc4ahkvp5znzc4zhfwsdih655q1kfjf0g231mmynxhvq"; }; buildInputs = [ qtbase qtwebengine ]; @@ -20,10 +20,6 @@ stdenv.mkDerivation rec { postInstall = '' mkdir -p $out/bin cp binary/QSyncthingTray $out/bin - cat > $out/bin/qt.conf < Date: Mon, 27 Feb 2017 08:42:44 +0100 Subject: [PATCH 125/216] hr: init at 1.2 (#23153) * hr: init at 1.2 * hr: simplify build --- pkgs/applications/misc/hr/default.nix | 28 +++++++++++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 ++ 2 files changed, 30 insertions(+) create mode 100644 pkgs/applications/misc/hr/default.nix diff --git a/pkgs/applications/misc/hr/default.nix b/pkgs/applications/misc/hr/default.nix new file mode 100644 index 00000000000..2fd56e3c555 --- /dev/null +++ b/pkgs/applications/misc/hr/default.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + name = "hr-${version}"; + version = "1.2"; + + src = fetchFromGitHub { + owner = "LuRsT"; + repo = "hr"; + rev = version; + sha256 = "162vkip2772jl59lschpinimpg4ssiyg7fq0va5cx4d7wldpqmks"; + }; + + dontBuild = true; + installFlags = [ "PREFIX=$(out)" "MANPREFIX=$(out)/share" ]; + + preInstall = '' + mkdir -p $out/{bin,share} + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/LuRsT/hr; + description = "A horizontal bar for your terminal"; + license = licenses.mit; + maintainers = [ maintainers.matthiasbeyer ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 3c99f958718..9b7fc534b59 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -924,6 +924,8 @@ with pkgs; hexio = callPackage ../development/tools/hexio { }; + hr = callPackage ../applications/misc/hr { }; + interlock = callPackage ../servers/interlock {}; kapacitor = callPackage ../servers/monitoring/kapacitor { }; From 90690e71b0021549dd503bc1f48e02f69ef64cdf Mon Sep 17 00:00:00 2001 From: Bart Brouns Date: Mon, 27 Feb 2017 09:22:32 +0100 Subject: [PATCH 126/216] fftw: 3.3.5 -> 3.3.6-pl1 (#23226) --- pkgs/development/libraries/fftw/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/libraries/fftw/default.nix b/pkgs/development/libraries/fftw/default.nix index e6c55ed1575..4bbc515831e 100644 --- a/pkgs/development/libraries/fftw/default.nix +++ b/pkgs/development/libraries/fftw/default.nix @@ -4,14 +4,14 @@ with lib; assert elem precision [ "single" "double" "long-double" "quad-precision" ]; -let version = "3.3.5"; in +let version = "3.3.6-pl1"; in stdenv.mkDerivation rec { name = "fftw-${precision}-${version}"; src = fetchurl { url = "ftp://ftp.fftw.org/pub/fftw/fftw-${version}.tar.gz"; - sha256 = "1kwbx92ps0r7s2mqy7lxbxanslxdzj7dp7r7gmdkzv1j8yqf3kwf"; + sha256 = "0g8qk98lgq770ixdf7n36yd5xjsgm2v3wzvnphwmhy6r4y2amx0y"; }; outputs = [ "out" "dev" "doc" ]; # it's dev-doc only From b52fa7b6229535f15afcdbd521e32297aa76ec55 Mon Sep 17 00:00:00 2001 From: Peter Hoeg Date: Fri, 24 Feb 2017 22:51:17 +0800 Subject: [PATCH 127/216] uchiwa: 0.21.1 Include script to upgrade. --- .../monitoring/uchiwa/bower-packages.nix | 23 +++++++++ pkgs/servers/monitoring/uchiwa/bower.json | 6 +++ pkgs/servers/monitoring/uchiwa/default.nix | 50 +++++++++++++++++++ pkgs/servers/monitoring/uchiwa/src.nix | 4 ++ pkgs/servers/monitoring/uchiwa/update.sh | 31 ++++++++++++ pkgs/top-level/all-packages.nix | 2 + 6 files changed, 116 insertions(+) create mode 100644 pkgs/servers/monitoring/uchiwa/bower-packages.nix create mode 100644 pkgs/servers/monitoring/uchiwa/bower.json create mode 100644 pkgs/servers/monitoring/uchiwa/default.nix create mode 100644 pkgs/servers/monitoring/uchiwa/src.nix create mode 100755 pkgs/servers/monitoring/uchiwa/update.sh diff --git a/pkgs/servers/monitoring/uchiwa/bower-packages.nix b/pkgs/servers/monitoring/uchiwa/bower-packages.nix new file mode 100644 index 00000000000..80e73d63235 --- /dev/null +++ b/pkgs/servers/monitoring/uchiwa/bower-packages.nix @@ -0,0 +1,23 @@ +# Generated by bower2nix v3.1.1 (https://github.com/rvl/bower2nix) +{ fetchbower, buildEnv }: +buildEnv { name = "bower-env"; ignoreCollisions = true; paths = [ + (fetchbower "uchiwa-web" "0.22.1" "0.22.1" "09rhssb5bpwdahdl2fxkjmax8cqg2m51bbf0m3lhkcrcjfc2w8kj") + (fetchbower "angular" "1.4.14" "~1.4" "1j5d80bxqh9lgcbmd661bsk8xrhnf43ym77jsk9n845gqr02bdkl") + (fetchbower "angular-bootstrap" "2.2.0" "~2.2.0" "0zbimxmrmgbz60xg5rnkhv4gd0zvp5fdjdx5407r6a942irfy2x7") + (fetchbower "angular-cookies" "1.4.14" "~1.4" "10z9azpd228jwdn8p767a93xhb5nrypwa0j6491kbcvm2q1k0g6a") + (fetchbower "angular-gravatar" "0.3.2" "~0.3.1" "17d2sc828dsnlkjc4b9irandpimqwan8hlvk9wlmlv8yiyi685p6") + (fetchbower "angular-mass-autocomplete-uchiwa" "0.4.1" "0.4.1" "1h2ypg35f6nd6gy6yznpiadql13lk1gyccq6qd4mvksbyb5va6l5") + (fetchbower "angular-moment" "0.9.2" "~0.9.0" "143vivplxqd03vg23ynad2yrlgn6dmad7avjmzh0ina2qx7zslgf") + (fetchbower "angular-resource" "1.4.14" "~1.4" "1ll2qd0kn39fl5aa49894n1bfcl8dgrfk0w154rkhg7k732q18bk") + (fetchbower "angular-route" "1.4.14" "~1.4" "0wfdgvvldgzf7c4lba3x8mw38l9zwkm0i9fg8ad7pvjkqz133sqs") + (fetchbower "angular-sanitize" "1.4.14" "~1.4" "072b8dcxjp4cjvcjqxsd0bxa8xd2nqvjb1v878qgfkhf0wz44x32") + (fetchbower "angular-toastr" "1.6.0" "1.6.0" "1yksx3a4c3cva5liq087z4j196p0vxp1mzhbr27qr9wmyy6z84z1") + (fetchbower "angular-ua-parser" "0.0.2" "0.0.2" "0z24747b0sywjyzl5chcwr96mpmyr595bry63c4d35mp186ail5z") + (fetchbower "bootstrap" "3.1.1" "3.1.1" "036xbjpv4621p5r2l9vfm9zys6h1mhkvb0zhvk3irrmkzsl77hwh") + (fetchbower "bootstrap-sass-official" "3.1.1" "3.1.1" "0rfmja15p8kxz6i3liwyqrmbm82azq61d3882w2vmp08vvv2c371") + (fetchbower "fontawesome" "4.4.0" "~4.4.0" "1mbs0vhixvg11vj3n0l3jn3pb6s839rcs416zq2wzfqkbvsc3sf5") + (fetchbower "highlightjs" "9.1.0" "~9.1.0" "1gz4q922sylbbqw1sawmjjq8nw0mk90wq0qq95ap0f31px7bfm3f") + (fetchbower "moment" "2.8.4" "~2.8.3" "1h30g5an2m9dja09m1s93hsfb25pzl0iah8mmab7nispl3mb585z") + (fetchbower "ua-parser-js" "0.7.12" "~0.7.12" "1hrhi7cdf5zd86jz7ipbb23qvkfplghfa92wa3aysca1rpg5zgpd") + (fetchbower "jquery" "3.1.1" ">= 1.9.0" "0rkp1hakimnjh3rvlzi30w7qx9x1j0gzjpaajgljn79kd082sgpd") +]; } diff --git a/pkgs/servers/monitoring/uchiwa/bower.json b/pkgs/servers/monitoring/uchiwa/bower.json new file mode 100644 index 00000000000..1eb94f73e6b --- /dev/null +++ b/pkgs/servers/monitoring/uchiwa/bower.json @@ -0,0 +1,6 @@ +{ + "name": "uchiwa", + "dependencies": { + "uchiwa-web": "0.21.0" + } +} diff --git a/pkgs/servers/monitoring/uchiwa/default.nix b/pkgs/servers/monitoring/uchiwa/default.nix new file mode 100644 index 00000000000..e7cf3e8f70e --- /dev/null +++ b/pkgs/servers/monitoring/uchiwa/default.nix @@ -0,0 +1,50 @@ +{ stdenv, fetchFromGitHub, buildBowerComponents, buildGoPackage, makeWrapper }: + +let + inherit (import ./src.nix) version sha256; + owner = "sensu"; + repo = "uchiwa"; + + src = fetchFromGitHub { + inherit owner repo sha256; + rev = "${version}"; + }; + + backend = buildGoPackage { + name = "uchiwa-backend-${version}"; + goPackagePath = "github.com/${owner}/${repo}"; + inherit src; + postInstall = '' + cp go/src/github.com/sensu/uchiwa/public/index.html $out/ + ''; + }; + + frontend = buildBowerComponents { + name = "uchiwa-frontend-${version}"; + generated = ./bower-packages.nix; + inherit src; + }; + +in stdenv.mkDerivation rec { + name = "uchiwa-${version}"; + + inherit src; + + buildInputs = [ makeWrapper ]; + + buildCommand = '' + mkdir -p $out/bin $out/public + makeWrapper ${backend.bin}/bin/uchiwa $out/bin/uchiwa \ + --add-flags "-p $out/public" + ln -s ${backend.out}/index.html $out/public/index.html + ln -s ${frontend.out}/bower_components $out/public/bower_components + ''; + + meta = with stdenv.lib; { + description = "A Dashboard for the sensu monitoring framework"; + homepage = http://sensuapp.org/; + license = licenses.mit; + maintainers = with maintainers; [ peterhoeg ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/servers/monitoring/uchiwa/src.nix b/pkgs/servers/monitoring/uchiwa/src.nix new file mode 100644 index 00000000000..68aaa4a5249 --- /dev/null +++ b/pkgs/servers/monitoring/uchiwa/src.nix @@ -0,0 +1,4 @@ +{ + version = "0.22.1"; + sha256 = "15wa7zhchis2rh6jcqkindlidmbf3mryr3apnqnr27ydi2vlqn3g"; +} diff --git a/pkgs/servers/monitoring/uchiwa/update.sh b/pkgs/servers/monitoring/uchiwa/update.sh new file mode 100755 index 00000000000..2802037a4f5 --- /dev/null +++ b/pkgs/servers/monitoring/uchiwa/update.sh @@ -0,0 +1,31 @@ +#!/usr/bin/env nix-shell +#!nix-shell -i bash -p nodePackages.bower2nix curl.bin git.out jq.out + +set -euo pipefail +IFS=$'\n\t' + +# set -x + +REPO=sensu/uchiwa + +VERSION=$(curl https://api.github.com/repos/${REPO}/tags -s | jq '.[0]' -r | jq .name -r) + +t=$(mktemp) + +echo "Updating to: ${VERSION}" + +curl https://raw.githubusercontent.com/${REPO}/${VERSION}/bower.json -s > $t +bower2nix $t bower-packages.nix + +pushd $(git rev-parse --show-toplevel) +sha=$(nix-prefetch-url -A uchiwa.src) +popd + +cat <<_EOF > src.nix +{ + version = "${VERSION}"; + sha256 = "${sha}"; +} +_EOF + +rm $t diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 9b7fc534b59..bd0a1da8546 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -10806,6 +10806,8 @@ with pkgs; ruby = ruby_2_1; }; + uchiwa = callPackage ../servers/monitoring/uchiwa { }; + shishi = callPackage ../servers/shishi { pam = if stdenv.isLinux then pam else null; # see also openssl, which has/had this same trick From 136c249e0ba8890c71216373d79274b78e167d06 Mon Sep 17 00:00:00 2001 From: Thomas Strobel <4ZKTUB6TEP74PYJOPWIR013S2AV29YUBW5F9ZH2F4D5UMJUJ6S@hash.domains> Date: Mon, 27 Feb 2017 10:47:36 +0100 Subject: [PATCH 128/216] init: moneyplex at 16.0.22424 --- .../applications/office/moneyplex/default.nix | 117 ++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 + 2 files changed, 119 insertions(+) create mode 100644 pkgs/applications/office/moneyplex/default.nix diff --git a/pkgs/applications/office/moneyplex/default.nix b/pkgs/applications/office/moneyplex/default.nix new file mode 100644 index 00000000000..866fda59d71 --- /dev/null +++ b/pkgs/applications/office/moneyplex/default.nix @@ -0,0 +1,117 @@ +{ stdenv, requireFile, writeScript, patchelf, libredirect, coreutils, pcsclite +, zlib, glib, gdk_pixbuf, gtk2, cairo, pango, libX11, atk, openssl }: + +let + libPath = stdenv.lib.makeLibraryPath [ + stdenv.cc.cc zlib glib gdk_pixbuf gtk2 cairo pango libX11 atk openssl + ]; +in + +stdenv.mkDerivation rec { + name = "moneyplex-${version}"; + version = "1.0"; + + src = requireFile { + message = '' + Unfortunately, Matrica does not provide an installable version of moneyplex. + To work around, install moneyplex on another system, und delete the following files + from the moneyplex installation directory: backups, mdaten, rup, Lnx\ Global.ali, Lnx\ Local ...ali + and settings.ini, and then pack the folder into moneyplex-${version}.tar.gz. + ''; + name = "moneyplex-${version}.tar.gz"; + sha256 = "0wpzwvhybjbqvqi8bpvkvcs3mikvl68gk1hzawihi0xnm28lcxw0"; + }; + + phases = [ "unpackPhase" "installPhase" "postInstall" ]; + + buildInputs = [ ]; + + installPhase = + '' + mkdir -p "$out/opt/moneyplex" + cp -r . $out/opt/moneyplex + + mkdir "$out/bin" + + cat > $out/bin/moneyplex < $out/share/applications/moneyplex.desktop < Date: Mon, 27 Feb 2017 10:47:37 +0100 Subject: [PATCH 129/216] nixos, dhcpd: make machines assignable --- nixos/modules/services/networking/dhcpd.nix | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/nixos/modules/services/networking/dhcpd.nix b/nixos/modules/services/networking/dhcpd.nix index 86bcaa96f34..2eac6dfec5b 100644 --- a/nixos/modules/services/networking/dhcpd.nix +++ b/nixos/modules/services/networking/dhcpd.nix @@ -60,8 +60,9 @@ let }; }; - machineOpts = {...}: { - config = { + machineOpts = { ... }: { + + options = { hostName = mkOption { type = types.str; @@ -156,7 +157,7 @@ let }; machines = mkOption { - type = types.listOf (types.submodule machineOpts); + type = with types; listOf (submodule machineOpts); default = []; example = [ { hostName = "foo"; From 5e44b5e2997925ab4c5d9ba1e5880115370107c1 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Edward=20Tj=C3=B6rnhammar?= Date: Sun, 26 Feb 2017 11:03:27 +0100 Subject: [PATCH 130/216] protobuf3_2: init at 3.2 --- pkgs/development/libraries/protobuf/3.2.nix | 6 ++++++ pkgs/top-level/all-packages.nix | 1 + 2 files changed, 7 insertions(+) create mode 100644 pkgs/development/libraries/protobuf/3.2.nix diff --git a/pkgs/development/libraries/protobuf/3.2.nix b/pkgs/development/libraries/protobuf/3.2.nix new file mode 100644 index 00000000000..338156bbdf9 --- /dev/null +++ b/pkgs/development/libraries/protobuf/3.2.nix @@ -0,0 +1,6 @@ +{ callPackage, lib, ... }: + +lib.overrideDerivation (callPackage ./generic-v3.nix { + version = "3.2.0"; + sha256 = "120g0bg7ichry74allgmqnh7k0z2sdnrrfklb58b7szzn4zcdz14"; +}) (attrs: { NIX_CFLAGS_COMPILE = "-Wno-error"; }) diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index f2fe4d47947..6de7c892d87 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9229,6 +9229,7 @@ with pkgs; # 3.0.0-beta-2 is only introduced for tensorflow. remove this version when tensorflow is moved to 3.0. protobuf3_0_0b2 = lowPrio (callPackage ../development/libraries/protobuf/3.0.0-beta-2.nix { }); protobuf3_1 = callPackage ../development/libraries/protobuf/3.1.nix { }; + protobuf3_2 = callPackage ../development/libraries/protobuf/3.2.nix { }; protobuf2_6 = callPackage ../development/libraries/protobuf/2.6.nix { }; protobuf2_5 = callPackage ../development/libraries/protobuf/2.5.nix { }; From 421db29915d0db88144f0de374f7f2c784c49b37 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Edward=20Tj=C3=B6rnhammar?= Date: Sun, 26 Feb 2017 11:03:27 +0100 Subject: [PATCH 131/216] pythonPackages.pyext: init at 0.7 --- .../python-modules/pyext/default.nix | 19 +++++++++++++++++++ pkgs/top-level/python-packages.nix | 2 ++ 2 files changed, 21 insertions(+) create mode 100644 pkgs/development/python-modules/pyext/default.nix diff --git a/pkgs/development/python-modules/pyext/default.nix b/pkgs/development/python-modules/pyext/default.nix new file mode 100644 index 00000000000..6f03a2edf79 --- /dev/null +++ b/pkgs/development/python-modules/pyext/default.nix @@ -0,0 +1,19 @@ +{ stdenv, buildPythonPackage, fetchPypi }: + +buildPythonPackage rec { + name = pname + "-" + version; + pname = "pyext"; + version = "0.7"; + + src = fetchPypi { + inherit pname version; + sha256 = "1pvwjkrjqajzh4wiiw1mzqp0bb81cqc2gk23nj24m32fpqssc676"; + }; + + meta = with stdenv.lib; { + description = "Simple Python extensions."; + homepage = "https://github.com/kirbyfan64/PyExt"; + license = licenses.mit; + maintainers = with maintainers; [ edwtjo ]; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index a1488740bc7..acb9cd141e9 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -20185,6 +20185,8 @@ in { }; }; + pyext = callPackage ../development/python-modules/pyext { }; + pyfantom = buildPythonPackage rec { name = "pyfantom-${version}"; version = "unstable-2013-12-18"; From a331662930f45f9ca4684dee6748696c57a68601 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Edward=20Tj=C3=B6rnhammar?= Date: Sun, 26 Feb 2017 11:03:27 +0100 Subject: [PATCH 132/216] pythonPackages.protobuf: add pyext dependency --- pkgs/development/python-modules/protobuf.nix | 4 ++-- pkgs/top-level/python-packages.nix | 9 ++++----- 2 files changed, 6 insertions(+), 7 deletions(-) diff --git a/pkgs/development/python-modules/protobuf.nix b/pkgs/development/python-modules/protobuf.nix index 8b9d1ddb03c..f2f0f5025d1 100644 --- a/pkgs/development/python-modules/protobuf.nix +++ b/pkgs/development/python-modules/protobuf.nix @@ -1,5 +1,5 @@ { stdenv, python, buildPythonPackage -, protobuf, google_apputils +, protobuf, google_apputils, pyext , disabled, doCheck ? true }: with stdenv.lib; @@ -9,7 +9,7 @@ buildPythonPackage rec { inherit disabled doCheck; propagatedBuildInputs = [ protobuf google_apputils ]; - buildInputs = [ google_apputils ]; + buildInputs = [ google_apputils pyext ]; prePatch = '' while [ ! -d python ]; do diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index acb9cd141e9..dbec6e2dc79 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -19316,12 +19316,11 @@ in { protobuf = self.protobuf2_6; # only required by tensorflow - protobuf3_0_0b2 = callPackage ../development/python-modules/protobuf.nix { - disabled = isPyPy || isPy3k; - doCheck = isPy3k; - protobuf = pkgs.protobuf3_0_0b2; + protobuf3_2 = callPackage ../development/python-modules/protobuf.nix { + disabled = isPyPy; + doCheck = !isPy3k; + protobuf = pkgs.protobuf3_2; }; - protobuf3_0 = callPackage ../development/python-modules/protobuf.nix { disabled = isPyPy; doCheck = isPy3k; From 7864782d71b3653b7c50da492f5548b3cf3dc0ca Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Edward=20Tj=C3=B6rnhammar?= Date: Sun, 26 Feb 2017 11:03:27 +0100 Subject: [PATCH 133/216] pythonPackages.tensorflow: 0.10.0 -> 1.0.0 --- .../python-modules/tensorflow/cuda.nix | 52 --------- .../python-modules/tensorflow/default.nix | 110 +++++++++++++++--- pkgs/top-level/python-packages.nix | 4 +- 3 files changed, 97 insertions(+), 69 deletions(-) delete mode 100644 pkgs/development/python-modules/tensorflow/cuda.nix diff --git a/pkgs/development/python-modules/tensorflow/cuda.nix b/pkgs/development/python-modules/tensorflow/cuda.nix deleted file mode 100644 index 05a4cc3e4c1..00000000000 --- a/pkgs/development/python-modules/tensorflow/cuda.nix +++ /dev/null @@ -1,52 +0,0 @@ -{ stdenv -, fetchurl -, buildPythonPackage -, swig -, numpy -, six -, protobuf3_0 -, cudatoolkit75 -, cudnn5_cudatoolkit75 -, gcc49 -, zlib -, linuxPackages -, mock -}: - -buildPythonPackage rec { - pname = "tensorflow"; - version = "0.11.0rc0"; - name = "${pname}-${version}"; - format = "wheel"; - - src = fetchurl { - url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow-${version}-cp27-none-linux_x86_64.whl"; - sha256 = "1r8zlz95sw7bnjzg5zdbpa9dj8wmp8cvvgyl9sv3amsscagnnfj5"; - }; - - buildInputs = [ swig ]; - propagatedBuildInputs = [ numpy six protobuf3_0 cudatoolkit75 cudnn5_cudatoolkit75 gcc49 mock ]; - - # Note that we need to run *after* the fixup phase because the - # libraries are loaded at runtime. If we run in preFixup then - # patchelf --shrink-rpath will remove the cuda libraries. - postFixup = let - rpath = stdenv.lib.makeLibraryPath [ - gcc49.cc.lib - zlib cudatoolkit75 - cudnn5_cudatoolkit75 - linuxPackages.nvidia_x11 - ]; - in '' - find $out -name '*.so' -exec patchelf --set-rpath "${rpath}" {} \; - ''; - - doCheck = false; - - meta = with stdenv.lib; { - description = "TensorFlow helps the tensors flow (no gpu support)"; - homepage = http://tensorflow.org; - license = licenses.asl20; - platforms = platforms.linux; - }; -} diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/default.nix index f8bc35eb568..9357ea90b40 100644 --- a/pkgs/development/python-modules/tensorflow/default.nix +++ b/pkgs/development/python-modules/tensorflow/default.nix @@ -1,15 +1,29 @@ { stdenv , fetchurl , buildPythonPackage +, isPy35, isPy27 +, cudaSupport ? false +, cudatoolkit75 ? null +, cudnn5_cudatoolkit75 ? null +, gcc49 ? null +, linuxPackages ? null , numpy , six -, protobuf3_0_0b2 +, protobuf3_2 , swig , mock , gcc , zlib }: +assert cudaSupport -> cudatoolkit75 != null + && cudnn5_cudatoolkit75 != null + && gcc49 != null + && linuxPackages != null; + +# unsupported combination +assert ! (stdenv.isDarwin && cudaSupport); + # tensorflow is built from a downloaded wheel, because the upstream # project's build system is an arcane beast based on # bazel. Untangling it and building the wheel from source is an open @@ -17,32 +31,96 @@ buildPythonPackage rec { pname = "tensorflow"; - version = "0.10.0"; + version = "1.0.0"; name = "${pname}-${version}"; format = "wheel"; + disabled = ! (isPy35 || isPy27); - src = fetchurl { - url = if stdenv.isDarwin then - "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-${version}-py2-none-any.whl" else - "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-${version}-cp27-none-linux_x86_64.whl"; - sha256 = if stdenv.isDarwin then - "1gjybh3j3rn34bzhsxsfdbqgsr4jh50qyx2wqywvcb24fkvy40j9" else - "0g05pa4z6kdy0giz7hjgjgwf4zzr5l8cf1zh247ymixlikn3fnpx"; - }; + src = let + tfurl = sys: proc: pykind: + let + tfpref = if proc == "gpu" + then "gpu/tensorflow_gpu" + else "cpu/tensorflow"; + in + "https://storage.googleapis.com/tensorflow/${sys}/${tfpref}-${version}-${pykind}.whl"; + dls = + { + darwin.cpu = { + py2 = { + url = tfurl "mac" "cpu" "py2-none-any" ; + sha256 = "15ayil28p20wkgpwkr4mz0imjxnf049xx4117jspg1qkjg2bn1b2"; + }; + py3 = { + url = tfurl "mac" "cpu" "py3-none-any" ; + sha256 = "1ynyhbm7yrp421364s49a1r3p83zxy74iiy5c4hx2xm5c4gs29an"; + }; + }; + linux-x86_64.cpu = { + py2 = { + url = tfurl "linux" "cpu" "cp27-none-linux_x86_64"; + sha256 = "1hwhq1qhjrfkqfkxpsrq6mdmdibnqr3n7xvzkxp6gaqj73vn5ch2"; + }; + py3 = { + url = tfurl "linux" "cpu" "cp35-cp35m-linux_x86_64"; + sha256 = "0jx2mmlw0nxah9l25r46i7diqiv31qcz7855n250lsxfwcppy7y3"; + }; + }; + linux-x86_64.cuda = { + py2 = { + url = tfurl "linux" "gpu" "cp27-none-linux_x86_64"; + sha256 = "0l8f71x3ama5a6idj05jrswlmp4yg37fxhz8lx2xmgk14aszbcy5"; + }; + py3 = { + url = tfurl "linux" "gpu" "cp35-cp35m-linux_x86_64"; + sha256 = "12q7s0yk0h3r4glh0fhl1fcdx7jl8xikwwp04a1lcagasr51s36m"; + }; + }; + }; + in + fetchurl ( + if stdenv.isDarwin then + if isPy35 then + dls.darwin.cpu.py3 + else + dls.darwin.cpu.py2 + else if isPy35 then + if cudaSupport then + dls.linux-x86_64.cuda.py3 + else dls.linux-x86_64.cpu.py3 + else + if cudaSupport then + dls.linux-x86_64.cuda.py2 + else + dls.linux-x86_64.cpu.py2 + ); - propagatedBuildInputs = [ numpy six protobuf3_0_0b2 swig mock]; + propagatedBuildInputs = with stdenv.lib; + [ numpy six protobuf3_2 swig mock ] + ++ optionals cudaSupport [ cudatoolkit75 cudnn5_cudatoolkit75 gcc49 ]; - preFixup = '' - RPATH="${stdenv.lib.makeLibraryPath [ gcc.cc.lib zlib ]}" - find $out -name '*.so' -exec patchelf --set-rpath "$RPATH" {} \; + # Note that we need to run *after* the fixup phase because the + # libraries are loaded at runtime. If we run in preFixup then + # patchelf --shrink-rpath will remove the cuda libraries. + postFixup = let + rpath = stdenv.lib.makeLibraryPath + (if cudaSupport then + [ gcc49.cc.lib zlib cudatoolkit75 cudnn5_cudatoolkit75 + linuxPackages.nvidia_x11 ] + else + [ gcc.cc.lib zlib ] + ); + in + '' + find $out -name '*.so' -exec patchelf --set-rpath "${rpath}" {} \; ''; doCheck = false; meta = with stdenv.lib; { - description = "TensorFlow helps the tensors flow (no gpu support)"; + description = "TensorFlow helps the tensors flow"; homepage = http://tensorflow.org; license = licenses.asl20; - platforms = with platforms; linux ++ darwin; + platforms = with platforms; if cudaSupport then linux else linux ++ darwin; }; } diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index dbec6e2dc79..6a51e40d123 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -31254,7 +31254,9 @@ EOF tensorflowWithoutCuda = callPackage ../development/python-modules/tensorflow { }; - tensorflowWithCuda = callPackage ../development/python-modules/tensorflow/cuda.nix { }; + tensorflowWithCuda = callPackage ../development/python-modules/tensorflow { + cudaSupport = true; + }; tflearn = buildPythonPackage rec { name = "tflearn-0.2.1"; From eb073e9cd9c0a8b8d6f7f1901def14afc89341e3 Mon Sep 17 00:00:00 2001 From: Thomas Strobel <4ZKTUB6TEP74PYJOPWIR013S2AV29YUBW5F9ZH2F4D5UMJUJ6S@hash.domains> Date: Mon, 27 Feb 2017 11:03:39 +0100 Subject: [PATCH 134/216] moneyplex: fix: add download link --- .../applications/office/moneyplex/default.nix | 28 +++++++++++-------- 1 file changed, 16 insertions(+), 12 deletions(-) diff --git a/pkgs/applications/office/moneyplex/default.nix b/pkgs/applications/office/moneyplex/default.nix index 866fda59d71..4530305ee12 100644 --- a/pkgs/applications/office/moneyplex/default.nix +++ b/pkgs/applications/office/moneyplex/default.nix @@ -1,26 +1,30 @@ -{ stdenv, requireFile, writeScript, patchelf, libredirect, coreutils, pcsclite +{ stdenv, fetchurl, patchelf, libredirect, coreutils, pcsclite , zlib, glib, gdk_pixbuf, gtk2, cairo, pango, libX11, atk, openssl }: let libPath = stdenv.lib.makeLibraryPath [ stdenv.cc.cc zlib glib gdk_pixbuf gtk2 cairo pango libX11 atk openssl ]; + + src_i686 = { + url = "http://www.matrica.com/download/distribution/moneyplex_16_install32_22424.tar.gz"; + sha256 = "0yfpc6s85r08g796dycl378kagkma865vp7j72npia3hjc4vwamr"; + }; + + src_x86_64 = { + url = "http://www.matrica.com/download/distribution/moneyplex_16_install64_22424.tar.gz"; + sha256 = "03vxbg1yp8qyvcn6bw2a5s134nxzq9cn0vqbmlld7hh4knbsfqzw"; + }; in stdenv.mkDerivation rec { name = "moneyplex-${version}"; - version = "1.0"; + version = "16.0.22424"; + + src = fetchurl (if stdenv.system == "i686-linux" then src_i686 + else if stdenv.system == "x86_64-linux" then src_x86_64 + else throw "moneyplex requires i686-linux or x86_64-linux"); - src = requireFile { - message = '' - Unfortunately, Matrica does not provide an installable version of moneyplex. - To work around, install moneyplex on another system, und delete the following files - from the moneyplex installation directory: backups, mdaten, rup, Lnx\ Global.ali, Lnx\ Local ...ali - and settings.ini, and then pack the folder into moneyplex-${version}.tar.gz. - ''; - name = "moneyplex-${version}.tar.gz"; - sha256 = "0wpzwvhybjbqvqi8bpvkvcs3mikvl68gk1hzawihi0xnm28lcxw0"; - }; phases = [ "unpackPhase" "installPhase" "postInstall" ]; From 9e21b2c5e99a76379d5993b88f2de645ab2a390c Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:30:00 +0100 Subject: [PATCH 135/216] gst-python: align attrname with pkgname --- pkgs/applications/audio/morituri/default.nix | 4 ++-- pkgs/applications/audio/quodlibet/default.nix | 4 ++-- pkgs/applications/video/miro/default.nix | 4 ++-- pkgs/development/libraries/farsight2/default.nix | 4 ++-- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 7 +++---- 6 files changed, 12 insertions(+), 12 deletions(-) diff --git a/pkgs/applications/audio/morituri/default.nix b/pkgs/applications/audio/morituri/default.nix index 0ab0d24c272..44d10957ca6 100644 --- a/pkgs/applications/audio/morituri/default.nix +++ b/pkgs/applications/audio/morituri/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, pythonPackages, cdparanoia, cdrdao -, gst_python, gst_plugins_base, gst_plugins_good +, gst-python, gst_plugins_base, gst_plugins_good , utillinux, makeWrapper, substituteAll, autoreconfHook }: let @@ -17,7 +17,7 @@ in stdenv.mkDerivation rec { }; pythonPath = with pythonPackages; [ - pygobject2 gst_python musicbrainzngs + pygobject2 gst-python musicbrainzngs pycdio pyxdg setuptools CDDB ]; diff --git a/pkgs/applications/audio/quodlibet/default.nix b/pkgs/applications/audio/quodlibet/default.nix index 0546f9a0ad2..1c6bd7783eb 100644 --- a/pkgs/applications/audio/quodlibet/default.nix +++ b/pkgs/applications/audio/quodlibet/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, python2Packages, intltool -, gst_python, withGstPlugins ? false, gst_plugins_base ? null +, gst-python, withGstPlugins ? false, gst_plugins_base ? null , gst_plugins_good ? null, gst_plugins_ugly ? null, gst_plugins_bad ? null }: assert withGstPlugins -> gst_plugins_base != null @@ -48,7 +48,7 @@ in buildPythonApplication { ]; propagatedBuildInputs = [ - mutagen pygtk pygobject2 dbus-python gst_python intltool + mutagen pygtk pygobject2 dbus-python gst-python intltool ]; postInstall = stdenv.lib.optionalString withGstPlugins '' diff --git a/pkgs/applications/video/miro/default.nix b/pkgs/applications/video/miro/default.nix index 0652ac7e664..b0a793dc105 100644 --- a/pkgs/applications/video/miro/default.nix +++ b/pkgs/applications/video/miro/default.nix @@ -2,7 +2,7 @@ , pythonPackages, pyrex096, ffmpeg, boost, glib, gtk2, webkitgtk2, libsoup , taglib, sqlite , libtorrentRasterbar, glib_networking, gsettings_desktop_schemas -, gst_python, gst_plugins_base, gst_plugins_good, gst_ffmpeg +, gst-python, gst_plugins_base, gst_plugins_good, gst_ffmpeg , enableBonjour ? false, avahi ? null }: @@ -77,7 +77,7 @@ in buildPythonApplication rec { propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pycurl mutagen pycairo dbus-python pywebkitgtk] ++ [ libtorrentRasterbar - gst_python gst_plugins_base gst_plugins_good gst_ffmpeg + gst-python gst_plugins_base gst_plugins_good gst_ffmpeg ] ++ optional enableBonjour avahi; meta = { diff --git a/pkgs/development/libraries/farsight2/default.nix b/pkgs/development/libraries/farsight2/default.nix index b7a17c82beb..da6c799ae8b 100644 --- a/pkgs/development/libraries/farsight2/default.nix +++ b/pkgs/development/libraries/farsight2/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, libnice, pkgconfig, python2Packages, gstreamer, gst_plugins_base -, gst_python, gupnp_igd }: +, gst-python, gupnp_igd }: let inherit (python2Packages) python pygobject2; @@ -11,7 +11,7 @@ in stdenv.mkDerivation rec { sha256 = "16qz4x14rdycm4nrn5wx6k2y22fzrazsbmihrxdwafx9cyf23kjm"; }; - buildInputs = [ libnice python pygobject2 gst_python gupnp_igd ]; + buildInputs = [ libnice python pygobject2 gst-python gupnp_igd ]; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 841eb75e905..97a93c17ac4 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -52,6 +52,7 @@ doNotDisplayTwice rec { git-hub = gitAndTools.git-hub; # added 2016-04-29 googleAuthenticator = google-authenticator; # added 2016-10-16 grantlee5 = qt5.grantlee; # added 2015-12-19 + gst_python = gst-python; # added 2017-02 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 htmlTidy = html-tidy; # added 2014-12-06 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 6de7c892d87..bdc71215376 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -7518,7 +7518,7 @@ with pkgs; }); gst_all = { - inherit (pkgs) gstreamer gnonlin gst_python qt_gstreamer; + inherit (pkgs) gstreamer gnonlin gst-python qt_gstreamer; gstPluginsBase = pkgs.gst_plugins_base; gstPluginsBad = pkgs.gst_plugins_bad; gstPluginsGood = pkgs.gst_plugins_good; @@ -7530,8 +7530,7 @@ with pkgs; gst-plugins-bad = pkgs.gst_plugins_bad; gst-plugins-good = pkgs.gst_plugins_good; gst-plugins-ugly = pkgs.gst_plugins_ugly; - gst-ffmpeg = pkgs.gst_ffmpeg; - gst-python = pkgs.gst_python; + gst-ffmpeg = pkgs.gst-ffmpeg; }; gstreamer = callPackage ../development/libraries/gstreamer/legacy/gstreamer { @@ -7552,7 +7551,7 @@ with pkgs; ffmpeg = ffmpeg_0; }; - gst_python = callPackage ../development/libraries/gstreamer/legacy/gst-python {}; + gst-python = callPackage ../development/libraries/gstreamer/legacy/gst-python {}; gstreamermm = callPackage ../development/libraries/gstreamer/legacy/gstreamermm { }; From 4b2c7fe3d1c6f46d5829db0e4b9dab1bdbfd8c1b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:31:29 +0100 Subject: [PATCH 136/216] gst-ffmpeg: align attrname with pkgname --- pkgs/applications/audio/banshee/default.nix | 4 ++-- pkgs/applications/audio/transcribe/default.nix | 4 ++-- .../networking/instant-messengers/baresip/default.nix | 4 ++-- pkgs/applications/video/miro/default.nix | 4 ++-- pkgs/tools/security/tor/torbrowser.nix | 4 ++-- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 6 +++--- 7 files changed, 14 insertions(+), 13 deletions(-) diff --git a/pkgs/applications/audio/banshee/default.nix b/pkgs/applications/audio/banshee/default.nix index 4e5086bdb26..a8669dc957c 100644 --- a/pkgs/applications/audio/banshee/default.nix +++ b/pkgs/applications/audio/banshee/default.nix @@ -1,5 +1,5 @@ { pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst_plugins_base -, gst_plugins_good, gst_plugins_bad, gst_plugins_ugly, gst_ffmpeg, glib +, gst_plugins_good, gst_plugins_bad, gst_plugins_ugly, gst-ffmpeg, glib , mono, mono-addins, dbus-sharp-1_0, dbus-sharp-glib-1_0, notify-sharp, gtk-sharp-2_0 , boo, gdata-sharp, taglib-sharp, sqlite, gnome-sharp, gconf, gtk-sharp-beans, gio-sharp , libmtp, libgpod, mono-zeroconf }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst_plugins_good - gst_plugins_bad gst_plugins_ugly gst_ffmpeg + gst_plugins_bad gst_plugins_ugly gst-ffmpeg mono dbus-sharp-1_0 dbus-sharp-glib-1_0 mono-addins notify-sharp gtk-sharp-2_0 boo gdata-sharp taglib-sharp sqlite gnome-sharp gconf gtk-sharp-beans gio-sharp libmtp libgpod mono-zeroconf diff --git a/pkgs/applications/audio/transcribe/default.nix b/pkgs/applications/audio/transcribe/default.nix index 55e4b8e00b6..2f1ebfb470a 100644 --- a/pkgs/applications/audio/transcribe/default.nix +++ b/pkgs/applications/audio/transcribe/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchzip, lib, makeWrapper, alsaLib, atk, cairo, gdk_pixbuf -, glib, gst_ffmpeg, gst_plugins_bad, gst_plugins_base +, glib, gst-ffmpeg, gst_plugins_bad, gst_plugins_base , gst_plugins_good, gst_plugins_ugly, gstreamer, gtk2, libSM, libX11 , libpng12, pango, zlib }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; buildInputs = [ gst_plugins_base gst_plugins_good - gst_plugins_bad gst_plugins_ugly gst_ffmpeg ]; + gst_plugins_bad gst_plugins_ugly gst-ffmpeg ]; dontPatchELF = true; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index 3ce638e6b58..0ed65b72bfa 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchurl, zlib, openssl, libre, librem, pkgconfig -, cairo, mpg123, gstreamer, gst_ffmpeg, gst_plugins_base, gst_plugins_bad +, cairo, mpg123, gstreamer, gst-ffmpeg, gst_plugins_base, gst_plugins_bad , gst_plugins_good, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg , gsm, speex, portaudio, spandsp, libuuid, ccache }: @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "0dhlgjkqn7jkd1pmdyid41c829clzmi5kczjdwxzh5ygn95lydjc"; }; buildInputs = [zlib openssl libre librem pkgconfig - cairo mpg123 gstreamer gst_ffmpeg gst_plugins_base gst_plugins_bad gst_plugins_good + cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst_plugins_bad gst_plugins_good alsaLib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid ccache ]; diff --git a/pkgs/applications/video/miro/default.nix b/pkgs/applications/video/miro/default.nix index b0a793dc105..443726ecb85 100644 --- a/pkgs/applications/video/miro/default.nix +++ b/pkgs/applications/video/miro/default.nix @@ -2,7 +2,7 @@ , pythonPackages, pyrex096, ffmpeg, boost, glib, gtk2, webkitgtk2, libsoup , taglib, sqlite , libtorrentRasterbar, glib_networking, gsettings_desktop_schemas -, gst-python, gst_plugins_base, gst_plugins_good, gst_ffmpeg +, gst-python, gst_plugins_base, gst_plugins_good, gst-ffmpeg , enableBonjour ? false, avahi ? null }: @@ -77,7 +77,7 @@ in buildPythonApplication rec { propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pycurl mutagen pycairo dbus-python pywebkitgtk] ++ [ libtorrentRasterbar - gst-python gst_plugins_base gst_plugins_good gst_ffmpeg + gst-python gst_plugins_base gst_plugins_good gst-ffmpeg ] ++ optional enableBonjour avahi; meta = { diff --git a/pkgs/tools/security/tor/torbrowser.nix b/pkgs/tools/security/tor/torbrowser.nix index 490864ee2d5..1073fd1cbad 100644 --- a/pkgs/tools/security/tor/torbrowser.nix +++ b/pkgs/tools/security/tor/torbrowser.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeDesktopItem , libXrender, libX11, libXext, libXt, alsaLib, dbus, dbus_glib, glib, gtk2 , atk, pango, freetype, fontconfig, gdk_pixbuf, cairo, zlib -, gstreamer, gst_plugins_base, gst_plugins_good, gst_ffmpeg, gmp, ffmpeg +, gstreamer, gst_plugins_base, gst_plugins_good, gst-ffmpeg, gmp, ffmpeg , libpulseaudio , mediaSupport ? false }: @@ -16,7 +16,7 @@ let ]); # Ignored if !mediaSupport - gstPlugins = [ gstreamer gst_plugins_base gst_plugins_good gst_ffmpeg ]; + gstPlugins = [ gstreamer gst_plugins_base gst_plugins_good gst-ffmpeg ]; gstPluginsPath = stdenv.lib.concatMapStringsSep ":" (x: "${x}/lib/gstreamer-0.10") gstPlugins; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 97a93c17ac4..759d92cd05f 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -52,6 +52,7 @@ doNotDisplayTwice rec { git-hub = gitAndTools.git-hub; # added 2016-04-29 googleAuthenticator = google-authenticator; # added 2016-10-16 grantlee5 = qt5.grantlee; # added 2015-12-19 + gst_ffmpeg = gst-ffmpeg; # added 2017-02 gst_python = gst-python; # added 2017-02 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index bdc71215376..6ff7cb0beba 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -1151,7 +1151,7 @@ with pkgs; clementine = callPackage ../applications/audio/clementine { boost = boost155; - gst_plugins = [ gst_plugins_base gst_plugins_good gst_plugins_ugly gst_ffmpeg ]; + gst_plugins = [ gst_plugins_base gst_plugins_good gst_plugins_ugly gst-ffmpeg ]; }; clementineFree = clementine.free; @@ -7523,7 +7523,7 @@ with pkgs; gstPluginsBad = pkgs.gst_plugins_bad; gstPluginsGood = pkgs.gst_plugins_good; gstPluginsUgly = pkgs.gst_plugins_ugly; - gstFfmpeg = pkgs.gst_ffmpeg; + gstFfmpeg = pkgs.gst-ffmpeg; # aliases with the dashed naming, same as in gst_all_1 gst-plugins-base = pkgs.gst_plugins_base; @@ -7547,7 +7547,7 @@ with pkgs; gst_plugins_ugly = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-ugly {}; - gst_ffmpeg = callPackage ../development/libraries/gstreamer/legacy/gst-ffmpeg { + gst-ffmpeg = callPackage ../development/libraries/gstreamer/legacy/gst-ffmpeg { ffmpeg = ffmpeg_0; }; From 0591cd607b3bcb2af298d978c1cedf8c5d9a1328 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:36:20 +0100 Subject: [PATCH 137/216] gst-plugins-good: align attrname with pkgname --- pkgs/applications/audio/banshee/default.nix | 4 ++-- pkgs/applications/audio/morituri/default.nix | 4 ++-- pkgs/applications/audio/quodlibet/default.nix | 6 +++--- pkgs/applications/audio/transcribe/default.nix | 4 ++-- .../networking/instant-messengers/baresip/default.nix | 4 ++-- pkgs/applications/video/miro/default.nix | 4 ++-- pkgs/desktops/xfce/applications/xfce4-mixer.nix | 4 ++-- pkgs/tools/networking/uget/default.nix | 4 ++-- pkgs/tools/security/tor/torbrowser.nix | 4 ++-- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 8 ++++---- 11 files changed, 24 insertions(+), 23 deletions(-) diff --git a/pkgs/applications/audio/banshee/default.nix b/pkgs/applications/audio/banshee/default.nix index a8669dc957c..ca723e61e06 100644 --- a/pkgs/applications/audio/banshee/default.nix +++ b/pkgs/applications/audio/banshee/default.nix @@ -1,5 +1,5 @@ { pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst_plugins_base -, gst_plugins_good, gst_plugins_bad, gst_plugins_ugly, gst-ffmpeg, glib +, gst-plugins-good, gst_plugins_bad, gst_plugins_ugly, gst-ffmpeg, glib , mono, mono-addins, dbus-sharp-1_0, dbus-sharp-glib-1_0, notify-sharp, gtk-sharp-2_0 , boo, gdata-sharp, taglib-sharp, sqlite, gnome-sharp, gconf, gtk-sharp-beans, gio-sharp , libmtp, libgpod, mono-zeroconf }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ - gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst_plugins_good + gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst-plugins-good gst_plugins_bad gst_plugins_ugly gst-ffmpeg mono dbus-sharp-1_0 dbus-sharp-glib-1_0 mono-addins notify-sharp gtk-sharp-2_0 boo gdata-sharp taglib-sharp sqlite gnome-sharp gconf gtk-sharp-beans diff --git a/pkgs/applications/audio/morituri/default.nix b/pkgs/applications/audio/morituri/default.nix index 44d10957ca6..053c295be52 100644 --- a/pkgs/applications/audio/morituri/default.nix +++ b/pkgs/applications/audio/morituri/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, pythonPackages, cdparanoia, cdrdao -, gst-python, gst_plugins_base, gst_plugins_good +, gst-python, gst_plugins_base, gst-plugins-good , utillinux, makeWrapper, substituteAll, autoreconfHook }: let @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ python cdparanoia cdrdao utillinux makeWrapper - gst_plugins_base gst_plugins_good + gst_plugins_base gst-plugins-good ] ++ pythonPath; patches = [ diff --git a/pkgs/applications/audio/quodlibet/default.nix b/pkgs/applications/audio/quodlibet/default.nix index 1c6bd7783eb..f243d0c15ed 100644 --- a/pkgs/applications/audio/quodlibet/default.nix +++ b/pkgs/applications/audio/quodlibet/default.nix @@ -1,9 +1,9 @@ { stdenv, fetchurl, python2Packages, intltool , gst-python, withGstPlugins ? false, gst_plugins_base ? null -, gst_plugins_good ? null, gst_plugins_ugly ? null, gst_plugins_bad ? null }: +, gst-plugins-good ? null, gst_plugins_ugly ? null, gst_plugins_bad ? null }: assert withGstPlugins -> gst_plugins_base != null - || gst_plugins_good != null + || gst-plugins-good != null || gst_plugins_ugly != null || gst_plugins_bad != null; @@ -44,7 +44,7 @@ in buildPythonApplication { patches = [ ./quodlibet-package-plugins.patch ]; buildInputs = stdenv.lib.optionals withGstPlugins [ - gst_plugins_base gst_plugins_good gst_plugins_ugly gst_plugins_bad + gst_plugins_base gst-plugins-good gst_plugins_ugly gst_plugins_bad ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/audio/transcribe/default.nix b/pkgs/applications/audio/transcribe/default.nix index 2f1ebfb470a..50c022ec004 100644 --- a/pkgs/applications/audio/transcribe/default.nix +++ b/pkgs/applications/audio/transcribe/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchzip, lib, makeWrapper, alsaLib, atk, cairo, gdk_pixbuf , glib, gst-ffmpeg, gst_plugins_bad, gst_plugins_base -, gst_plugins_good, gst_plugins_ugly, gstreamer, gtk2, libSM, libX11 +, gst-plugins-good, gst_plugins_ugly, gstreamer, gtk2, libSM, libX11 , libpng12, pango, zlib }: stdenv.mkDerivation rec { @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ gst_plugins_base gst_plugins_good + buildInputs = [ gst_plugins_base gst-plugins-good gst_plugins_bad gst_plugins_ugly gst-ffmpeg ]; dontPatchELF = true; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index 0ed65b72bfa..eb8aff40528 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -1,6 +1,6 @@ {stdenv, fetchurl, zlib, openssl, libre, librem, pkgconfig , cairo, mpg123, gstreamer, gst-ffmpeg, gst_plugins_base, gst_plugins_bad -, gst_plugins_good, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg +, gst-plugins-good, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg , gsm, speex, portaudio, spandsp, libuuid, ccache }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "0dhlgjkqn7jkd1pmdyid41c829clzmi5kczjdwxzh5ygn95lydjc"; }; buildInputs = [zlib openssl libre librem pkgconfig - cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst_plugins_bad gst_plugins_good + cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst_plugins_bad gst-plugins-good alsaLib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid ccache ]; diff --git a/pkgs/applications/video/miro/default.nix b/pkgs/applications/video/miro/default.nix index 443726ecb85..8a033d7761a 100644 --- a/pkgs/applications/video/miro/default.nix +++ b/pkgs/applications/video/miro/default.nix @@ -2,7 +2,7 @@ , pythonPackages, pyrex096, ffmpeg, boost, glib, gtk2, webkitgtk2, libsoup , taglib, sqlite , libtorrentRasterbar, glib_networking, gsettings_desktop_schemas -, gst-python, gst_plugins_base, gst_plugins_good, gst-ffmpeg +, gst-python, gst_plugins_base, gst-plugins-good, gst-ffmpeg , enableBonjour ? false, avahi ? null }: @@ -77,7 +77,7 @@ in buildPythonApplication rec { propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pycurl mutagen pycairo dbus-python pywebkitgtk] ++ [ libtorrentRasterbar - gst-python gst_plugins_base gst_plugins_good gst-ffmpeg + gst-python gst_plugins_base gst-plugins-good gst-ffmpeg ] ++ optional enableBonjour avahi; meta = { diff --git a/pkgs/desktops/xfce/applications/xfce4-mixer.nix b/pkgs/desktops/xfce/applications/xfce4-mixer.nix index 78c37771811..f14a2037184 100644 --- a/pkgs/desktops/xfce/applications/xfce4-mixer.nix +++ b/pkgs/desktops/xfce/applications/xfce4-mixer.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, pkgconfig, intltool, makeWrapper , glib, gstreamer, gst_plugins_base, gtk , libxfce4util, libxfce4ui, xfce4panel, xfconf, libunique ? null -, pulseaudioSupport ? false, gst_plugins_good +, pulseaudioSupport ? false, gst-plugins-good }: let @@ -10,7 +10,7 @@ let gst_plugins_minimal = gst_plugins_base.override { minimalDeps = true; }; - gst_plugins_pulse = gst_plugins_good.override { + gst_plugins_pulse = gst-plugins-good.override { minimalDeps = true; }; gst_plugins = [ gst_plugins_minimal ] ++ stdenv.lib.optional pulseaudioSupport gst_plugins_pulse; diff --git a/pkgs/tools/networking/uget/default.nix b/pkgs/tools/networking/uget/default.nix index 2408337d819..8a60858526e 100644 --- a/pkgs/tools/networking/uget/default.nix +++ b/pkgs/tools/networking/uget/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, openssl, curl, libnotify, gstreamer, - gst_plugins_base, gst_plugins_good, gnome3, makeWrapper, aria2 ? null }: + gst_plugins_base, gst-plugins-good, gnome3, makeWrapper, aria2 ? null }: stdenv.mkDerivation rec { name = "uget-${version}"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool makeWrapper ]; buildInputs = [ - openssl curl libnotify gstreamer gst_plugins_base gst_plugins_good + openssl curl libnotify gstreamer gst_plugins_base gst-plugins-good gnome3.gtk gnome3.dconf ] ++ (stdenv.lib.optional (aria2 != null) aria2); diff --git a/pkgs/tools/security/tor/torbrowser.nix b/pkgs/tools/security/tor/torbrowser.nix index 1073fd1cbad..12df8db832c 100644 --- a/pkgs/tools/security/tor/torbrowser.nix +++ b/pkgs/tools/security/tor/torbrowser.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeDesktopItem , libXrender, libX11, libXext, libXt, alsaLib, dbus, dbus_glib, glib, gtk2 , atk, pango, freetype, fontconfig, gdk_pixbuf, cairo, zlib -, gstreamer, gst_plugins_base, gst_plugins_good, gst-ffmpeg, gmp, ffmpeg +, gstreamer, gst_plugins_base, gst-plugins-good, gst-ffmpeg, gmp, ffmpeg , libpulseaudio , mediaSupport ? false }: @@ -16,7 +16,7 @@ let ]); # Ignored if !mediaSupport - gstPlugins = [ gstreamer gst_plugins_base gst_plugins_good gst-ffmpeg ]; + gstPlugins = [ gstreamer gst_plugins_base gst-plugins-good gst-ffmpeg ]; gstPluginsPath = stdenv.lib.concatMapStringsSep ":" (x: "${x}/lib/gstreamer-0.10") gstPlugins; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 759d92cd05f..630053463f6 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -53,6 +53,7 @@ doNotDisplayTwice rec { googleAuthenticator = google-authenticator; # added 2016-10-16 grantlee5 = qt5.grantlee; # added 2015-12-19 gst_ffmpeg = gst-ffmpeg; # added 2017-02 + gst_plugins_good = gst-plugins-good; # added 2017-02 gst_python = gst-python; # added 2017-02 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 6ff7cb0beba..57b17b46f11 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -1151,7 +1151,7 @@ with pkgs; clementine = callPackage ../applications/audio/clementine { boost = boost155; - gst_plugins = [ gst_plugins_base gst_plugins_good gst_plugins_ugly gst-ffmpeg ]; + gst_plugins = [ gst_plugins_base gst-plugins-good gst_plugins_ugly gst-ffmpeg ]; }; clementineFree = clementine.free; @@ -7521,14 +7521,14 @@ with pkgs; inherit (pkgs) gstreamer gnonlin gst-python qt_gstreamer; gstPluginsBase = pkgs.gst_plugins_base; gstPluginsBad = pkgs.gst_plugins_bad; - gstPluginsGood = pkgs.gst_plugins_good; + gstPluginsGood = pkgs.gst-plugins-good; gstPluginsUgly = pkgs.gst_plugins_ugly; gstFfmpeg = pkgs.gst-ffmpeg; # aliases with the dashed naming, same as in gst_all_1 gst-plugins-base = pkgs.gst_plugins_base; gst-plugins-bad = pkgs.gst_plugins_bad; - gst-plugins-good = pkgs.gst_plugins_good; + gst-plugins-good = pkgs.gst-plugins-good; gst-plugins-ugly = pkgs.gst_plugins_ugly; gst-ffmpeg = pkgs.gst-ffmpeg; }; @@ -7541,7 +7541,7 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) ApplicationServices; }; - gst_plugins_good = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-good {}; + gst-plugins-good = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-good {}; gst_plugins_bad = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-bad {}; From 1ea4146f66b7751f3bbabc351b18d37f0228a241 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:36:54 +0100 Subject: [PATCH 138/216] gst-plugins-bad: align attrname with pkgname --- pkgs/applications/audio/banshee/default.nix | 4 ++-- pkgs/applications/audio/quodlibet/default.nix | 6 +++--- pkgs/applications/audio/transcribe/default.nix | 4 ++-- .../networking/instant-messengers/baresip/default.nix | 4 ++-- .../networking/instant-messengers/gajim/default.nix | 6 +++--- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 8 ++++---- 7 files changed, 17 insertions(+), 16 deletions(-) diff --git a/pkgs/applications/audio/banshee/default.nix b/pkgs/applications/audio/banshee/default.nix index ca723e61e06..a1f00ace174 100644 --- a/pkgs/applications/audio/banshee/default.nix +++ b/pkgs/applications/audio/banshee/default.nix @@ -1,5 +1,5 @@ { pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst_plugins_base -, gst-plugins-good, gst_plugins_bad, gst_plugins_ugly, gst-ffmpeg, glib +, gst-plugins-good, gst-plugins-bad, gst_plugins_ugly, gst-ffmpeg, glib , mono, mono-addins, dbus-sharp-1_0, dbus-sharp-glib-1_0, notify-sharp, gtk-sharp-2_0 , boo, gdata-sharp, taglib-sharp, sqlite, gnome-sharp, gconf, gtk-sharp-beans, gio-sharp , libmtp, libgpod, mono-zeroconf }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst-plugins-good - gst_plugins_bad gst_plugins_ugly gst-ffmpeg + gst-plugins-bad gst_plugins_ugly gst-ffmpeg mono dbus-sharp-1_0 dbus-sharp-glib-1_0 mono-addins notify-sharp gtk-sharp-2_0 boo gdata-sharp taglib-sharp sqlite gnome-sharp gconf gtk-sharp-beans gio-sharp libmtp libgpod mono-zeroconf diff --git a/pkgs/applications/audio/quodlibet/default.nix b/pkgs/applications/audio/quodlibet/default.nix index f243d0c15ed..ff151eca149 100644 --- a/pkgs/applications/audio/quodlibet/default.nix +++ b/pkgs/applications/audio/quodlibet/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, python2Packages, intltool , gst-python, withGstPlugins ? false, gst_plugins_base ? null -, gst-plugins-good ? null, gst_plugins_ugly ? null, gst_plugins_bad ? null }: +, gst-plugins-good ? null, gst_plugins_ugly ? null, gst-plugins-bad ? null }: assert withGstPlugins -> gst_plugins_base != null || gst-plugins-good != null || gst_plugins_ugly != null - || gst_plugins_bad != null; + || gst-plugins-bad != null; let version = "2.6.3"; @@ -44,7 +44,7 @@ in buildPythonApplication { patches = [ ./quodlibet-package-plugins.patch ]; buildInputs = stdenv.lib.optionals withGstPlugins [ - gst_plugins_base gst-plugins-good gst_plugins_ugly gst_plugins_bad + gst_plugins_base gst-plugins-good gst_plugins_ugly gst-plugins-bad ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/audio/transcribe/default.nix b/pkgs/applications/audio/transcribe/default.nix index 50c022ec004..8bd07df063d 100644 --- a/pkgs/applications/audio/transcribe/default.nix +++ b/pkgs/applications/audio/transcribe/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchzip, lib, makeWrapper, alsaLib, atk, cairo, gdk_pixbuf -, glib, gst-ffmpeg, gst_plugins_bad, gst_plugins_base +, glib, gst-ffmpeg, gst-plugins-bad, gst_plugins_base , gst-plugins-good, gst_plugins_ugly, gstreamer, gtk2, libSM, libX11 , libpng12, pango, zlib }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; buildInputs = [ gst_plugins_base gst-plugins-good - gst_plugins_bad gst_plugins_ugly gst-ffmpeg ]; + gst-plugins-bad gst_plugins_ugly gst-ffmpeg ]; dontPatchELF = true; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index eb8aff40528..a7ddfd1ae41 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchurl, zlib, openssl, libre, librem, pkgconfig -, cairo, mpg123, gstreamer, gst-ffmpeg, gst_plugins_base, gst_plugins_bad +, cairo, mpg123, gstreamer, gst-ffmpeg, gst_plugins_base, gst-plugins-bad , gst-plugins-good, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg , gsm, speex, portaudio, spandsp, libuuid, ccache }: @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "0dhlgjkqn7jkd1pmdyid41c829clzmi5kczjdwxzh5ygn95lydjc"; }; buildInputs = [zlib openssl libre librem pkgconfig - cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst_plugins_bad gst-plugins-good + cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst-plugins-bad gst-plugins-good alsaLib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid ccache ]; diff --git a/pkgs/applications/networking/instant-messengers/gajim/default.nix b/pkgs/applications/networking/instant-messengers/gajim/default.nix index d78bd759ea6..ae318e64424 100644 --- a/pkgs/applications/networking/instant-messengers/gajim/default.nix +++ b/pkgs/applications/networking/instant-messengers/gajim/default.nix @@ -4,7 +4,7 @@ # Test requirements , xvfb_run -, enableJingle ? true, farstream ? null, gst_plugins_bad ? null +, enableJingle ? true, farstream ? null, gst-plugins-bad ? null , libnice ? null , enableE2E ? true , enableRST ? true @@ -14,7 +14,7 @@ , extraPythonPackages ? pkgs: [] }: -assert enableJingle -> farstream != null && gst_plugins_bad != null +assert enableJingle -> farstream != null && gst-plugins-bad != null && libnice != null; assert enableE2E -> pythonPackages.pycrypto != null; assert enableRST -> pythonPackages.docutils != null; @@ -77,7 +77,7 @@ stdenv.mkDerivation rec { buildInputs = [ python libX11 - ] ++ optionals enableJingle [ farstream gst_plugins_bad libnice ]; + ] ++ optionals enableJingle [ farstream gst-plugins-bad libnice ]; nativeBuildInputs = [ autoreconfHook pythonPackages.wrapPython intltool pkgconfig diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 630053463f6..2518bff1d78 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -54,6 +54,7 @@ doNotDisplayTwice rec { grantlee5 = qt5.grantlee; # added 2015-12-19 gst_ffmpeg = gst-ffmpeg; # added 2017-02 gst_plugins_good = gst-plugins-good; # added 2017-02 + gst_plugins_bad = gst-plugins-bad; # added 2017-02 gst_python = gst-python; # added 2017-02 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 57b17b46f11..e21f413f1d0 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -7520,14 +7520,14 @@ with pkgs; gst_all = { inherit (pkgs) gstreamer gnonlin gst-python qt_gstreamer; gstPluginsBase = pkgs.gst_plugins_base; - gstPluginsBad = pkgs.gst_plugins_bad; + gstPluginsBad = pkgs.gst-plugins-bad; gstPluginsGood = pkgs.gst-plugins-good; gstPluginsUgly = pkgs.gst_plugins_ugly; gstFfmpeg = pkgs.gst-ffmpeg; # aliases with the dashed naming, same as in gst_all_1 gst-plugins-base = pkgs.gst_plugins_base; - gst-plugins-bad = pkgs.gst_plugins_bad; + gst-plugins-bad = pkgs.gst-plugins-bad; gst-plugins-good = pkgs.gst-plugins-good; gst-plugins-ugly = pkgs.gst_plugins_ugly; gst-ffmpeg = pkgs.gst-ffmpeg; @@ -7543,7 +7543,7 @@ with pkgs; gst-plugins-good = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-good {}; - gst_plugins_bad = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-bad {}; + gst-plugins-bad = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-bad {}; gst_plugins_ugly = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-ugly {}; @@ -14922,7 +14922,7 @@ with pkgs; quodlibet = callPackage ../applications/audio/quodlibet { withGstPlugins = true; - gst_plugins_bad = null; + gst-plugins-bad = null; }; qutebrowser = qt5.callPackage ../applications/networking/browsers/qutebrowser { From 6b73e57e561ad5da21cd93b82674a5249ee6a391 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:37:41 +0100 Subject: [PATCH 139/216] gst-plugins-ugly: align attrname with pkgname --- pkgs/applications/audio/banshee/default.nix | 4 ++-- pkgs/applications/audio/quodlibet/default.nix | 6 +++--- pkgs/applications/audio/transcribe/default.nix | 4 ++-- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 8 ++++---- 5 files changed, 12 insertions(+), 11 deletions(-) diff --git a/pkgs/applications/audio/banshee/default.nix b/pkgs/applications/audio/banshee/default.nix index a1f00ace174..1907d621e49 100644 --- a/pkgs/applications/audio/banshee/default.nix +++ b/pkgs/applications/audio/banshee/default.nix @@ -1,5 +1,5 @@ { pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst_plugins_base -, gst-plugins-good, gst-plugins-bad, gst_plugins_ugly, gst-ffmpeg, glib +, gst-plugins-good, gst-plugins-bad, gst-plugins-ugly, gst-ffmpeg, glib , mono, mono-addins, dbus-sharp-1_0, dbus-sharp-glib-1_0, notify-sharp, gtk-sharp-2_0 , boo, gdata-sharp, taglib-sharp, sqlite, gnome-sharp, gconf, gtk-sharp-beans, gio-sharp , libmtp, libgpod, mono-zeroconf }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst-plugins-good - gst-plugins-bad gst_plugins_ugly gst-ffmpeg + gst-plugins-bad gst-plugins-ugly gst-ffmpeg mono dbus-sharp-1_0 dbus-sharp-glib-1_0 mono-addins notify-sharp gtk-sharp-2_0 boo gdata-sharp taglib-sharp sqlite gnome-sharp gconf gtk-sharp-beans gio-sharp libmtp libgpod mono-zeroconf diff --git a/pkgs/applications/audio/quodlibet/default.nix b/pkgs/applications/audio/quodlibet/default.nix index ff151eca149..2d97ba1d763 100644 --- a/pkgs/applications/audio/quodlibet/default.nix +++ b/pkgs/applications/audio/quodlibet/default.nix @@ -1,10 +1,10 @@ { stdenv, fetchurl, python2Packages, intltool , gst-python, withGstPlugins ? false, gst_plugins_base ? null -, gst-plugins-good ? null, gst_plugins_ugly ? null, gst-plugins-bad ? null }: +, gst-plugins-good ? null, gst-plugins-ugly ? null, gst-plugins-bad ? null }: assert withGstPlugins -> gst_plugins_base != null || gst-plugins-good != null - || gst_plugins_ugly != null + || gst-plugins-ugly != null || gst-plugins-bad != null; let @@ -44,7 +44,7 @@ in buildPythonApplication { patches = [ ./quodlibet-package-plugins.patch ]; buildInputs = stdenv.lib.optionals withGstPlugins [ - gst_plugins_base gst-plugins-good gst_plugins_ugly gst-plugins-bad + gst_plugins_base gst-plugins-good gst-plugins-ugly gst-plugins-bad ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/audio/transcribe/default.nix b/pkgs/applications/audio/transcribe/default.nix index 8bd07df063d..3eca141ee62 100644 --- a/pkgs/applications/audio/transcribe/default.nix +++ b/pkgs/applications/audio/transcribe/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchzip, lib, makeWrapper, alsaLib, atk, cairo, gdk_pixbuf , glib, gst-ffmpeg, gst-plugins-bad, gst_plugins_base -, gst-plugins-good, gst_plugins_ugly, gstreamer, gtk2, libSM, libX11 +, gst-plugins-good, gst-plugins-ugly, gstreamer, gtk2, libSM, libX11 , libpng12, pango, zlib }: stdenv.mkDerivation rec { @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; buildInputs = [ gst_plugins_base gst-plugins-good - gst-plugins-bad gst_plugins_ugly gst-ffmpeg ]; + gst-plugins-bad gst-plugins-ugly gst-ffmpeg ]; dontPatchELF = true; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 2518bff1d78..3ed1a721af5 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -55,6 +55,7 @@ doNotDisplayTwice rec { gst_ffmpeg = gst-ffmpeg; # added 2017-02 gst_plugins_good = gst-plugins-good; # added 2017-02 gst_plugins_bad = gst-plugins-bad; # added 2017-02 + gst_plugins_ugly = gst-plugins-ugly; # added 2017-02 gst_python = gst-python; # added 2017-02 gupnptools = gupnp-tools; # added 2015-12-19 gnustep-make = gnustep.make; # added 2016-7-6 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index e21f413f1d0..80127160a21 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -1151,7 +1151,7 @@ with pkgs; clementine = callPackage ../applications/audio/clementine { boost = boost155; - gst_plugins = [ gst_plugins_base gst-plugins-good gst_plugins_ugly gst-ffmpeg ]; + gst_plugins = [ gst_plugins_base gst-plugins-good gst-plugins-ugly gst-ffmpeg ]; }; clementineFree = clementine.free; @@ -7522,14 +7522,14 @@ with pkgs; gstPluginsBase = pkgs.gst_plugins_base; gstPluginsBad = pkgs.gst-plugins-bad; gstPluginsGood = pkgs.gst-plugins-good; - gstPluginsUgly = pkgs.gst_plugins_ugly; + gstPluginsUgly = pkgs.gst-plugins-ugly; gstFfmpeg = pkgs.gst-ffmpeg; # aliases with the dashed naming, same as in gst_all_1 gst-plugins-base = pkgs.gst_plugins_base; gst-plugins-bad = pkgs.gst-plugins-bad; gst-plugins-good = pkgs.gst-plugins-good; - gst-plugins-ugly = pkgs.gst_plugins_ugly; + gst-plugins-ugly = pkgs.gst-plugins-ugly; gst-ffmpeg = pkgs.gst-ffmpeg; }; @@ -7545,7 +7545,7 @@ with pkgs; gst-plugins-bad = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-bad {}; - gst_plugins_ugly = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-ugly {}; + gst-plugins-ugly = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-ugly {}; gst-ffmpeg = callPackage ../development/libraries/gstreamer/legacy/gst-ffmpeg { ffmpeg = ffmpeg_0; From 512bd7c52248b7a7a10d256c3ac68bd3aa9fc9ec Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:39:32 +0100 Subject: [PATCH 140/216] qt-gstreamer: align attrname with pkgname --- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 4 ++-- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 3ed1a721af5..cf30289a126 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -98,6 +98,7 @@ doNotDisplayTwice rec { poppler_qt5 = qt5.poppler; # added 2015-12-19 qca-qt5 = qt5.qca-qt5; # added 2015-12-19 QmidiNet = qmidinet; # added 2016-05-22 + qt_gstreamer = qt-gstreamer; # added 2017-02 quake3game = ioquake3; # added 2016-01-14 qwt6 = qt5.qwt; # added 2015-12-19 rdiff_backup = rdiff-backup; # added 2014-11-23 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 80127160a21..028068a9544 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -7518,7 +7518,7 @@ with pkgs; }); gst_all = { - inherit (pkgs) gstreamer gnonlin gst-python qt_gstreamer; + inherit (pkgs) gstreamer gnonlin gst-python qt-gstreamer; gstPluginsBase = pkgs.gst_plugins_base; gstPluginsBad = pkgs.gst-plugins-bad; gstPluginsGood = pkgs.gst-plugins-good; @@ -7563,7 +7563,7 @@ with pkgs; qt-mobility = callPackage ../development/libraries/qt-mobility {}; - qt_gstreamer = callPackage ../development/libraries/gstreamer/legacy/qt-gstreamer {}; + qt-gstreamer = callPackage ../development/libraries/gstreamer/legacy/qt-gstreamer {}; qt_gstreamer1 = callPackage ../development/libraries/gstreamer/qt-gstreamer { boost = boost155;}; From c49533a4949b5fc7d3511dce7df4c27f811df4d7 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 20:40:56 +0100 Subject: [PATCH 141/216] qt-gstreamer1: align attrname with pkgname --- .../instant-messengers/telepathy/kde/default.nix | 8 ++++---- .../science/robotics/qgroundcontrol/default.nix | 2 +- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 2 +- 4 files changed, 7 insertions(+), 6 deletions(-) diff --git a/pkgs/applications/networking/instant-messengers/telepathy/kde/default.nix b/pkgs/applications/networking/instant-messengers/telepathy/kde/default.nix index c79f939dc73..592fc2b5934 100644 --- a/pkgs/applications/networking/instant-messengers/telepathy/kde/default.nix +++ b/pkgs/applications/networking/instant-messengers/telepathy/kde/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchgit, automoc4, cmake, gettext, perl, pkgconfig , telepathy_qt, kdelibs4, kde_workspace, dbus_glib, dbus_libs, farstream -, qt_gstreamer1, telepathy_glib, telepathy_logger +, qt-gstreamer1, telepathy_glib, telepathy_logger , qjson, flex, bison, qca2 }: let @@ -21,10 +21,10 @@ let extraBuildInputs = { auth_handler = [ qjson qca2 ]; - call_ui = [ qt_gstreamer1 telepathy_glib farstream ]; + call_ui = [ qt-gstreamer1 telepathy_glib farstream ]; contact_applet = [ kde_workspace ]; - telepathy_logger_qt = [ telepathy_logger qt_gstreamer1 ]; - text_ui = [ qt_gstreamer1 telepathy_logger qjson ]; + telepathy_logger_qt = [ telepathy_logger qt-gstreamer1 ]; + text_ui = [ qt-gstreamer1 telepathy_logger qjson ]; common_internals = [ telepathy_qt ]; }; diff --git a/pkgs/applications/science/robotics/qgroundcontrol/default.nix b/pkgs/applications/science/robotics/qgroundcontrol/default.nix index 4222336fe9b..98567c340bc 100644 --- a/pkgs/applications/science/robotics/qgroundcontrol/default.nix +++ b/pkgs/applications/science/robotics/qgroundcontrol/default.nix @@ -2,7 +2,7 @@ , qtbase, qtlocation, qtserialport, qtdeclarative, qtconnectivity, qtxmlpatterns , qtsvg, qtquick1, qtquickcontrols, qtgraphicaleffects, qmakeHook , makeQtWrapper, lndir - , gst_all_1, qt_gstreamer1, pkgconfig, glibc + , gst_all_1, qt-gstreamer1, pkgconfig, glibc , version ? "2.9.4" }: diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index cf30289a126..efeb14eb417 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -99,6 +99,7 @@ doNotDisplayTwice rec { qca-qt5 = qt5.qca-qt5; # added 2015-12-19 QmidiNet = qmidinet; # added 2016-05-22 qt_gstreamer = qt-gstreamer; # added 2017-02 + qt_gstreamer1 = qt-gstreamer1; # added 2017-02 quake3game = ioquake3; # added 2016-01-14 qwt6 = qt5.qwt; # added 2015-12-19 rdiff_backup = rdiff-backup; # added 2014-11-23 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 028068a9544..acd872768a2 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -7565,7 +7565,7 @@ with pkgs; qt-gstreamer = callPackage ../development/libraries/gstreamer/legacy/qt-gstreamer {}; - qt_gstreamer1 = callPackage ../development/libraries/gstreamer/qt-gstreamer { boost = boost155;}; + qt-gstreamer1 = callPackage ../development/libraries/gstreamer/qt-gstreamer { boost = boost155;}; gnet = callPackage ../development/libraries/gnet { }; From 3d104ab2b3e578cb4599b6fffbcc019b09547521 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Sun, 26 Feb 2017 21:25:29 +0100 Subject: [PATCH 142/216] gst-plugins-base: align attrname with pkgname --- pkgs/applications/audio/banshee/default.nix | 4 ++-- .../applications/audio/clementine/default.nix | 4 ++-- pkgs/applications/audio/morituri/default.nix | 4 ++-- pkgs/applications/audio/quodlibet/default.nix | 6 ++--- .../applications/audio/transcribe/default.nix | 6 ++--- .../browsers/firefox-bin/default.nix | 4 ++-- .../networking/browsers/firefox/default.nix | 4 ++-- .../networking/browsers/palemoon/default.nix | 4 ++-- .../networking/browsers/vivaldi/default.nix | 4 ++-- .../instant-messengers/baresip/default.nix | 4 ++-- .../instant-messengers/zoom-us/default.nix | 4 ++-- .../mailreaders/thunderbird-bin/default.nix | 4 ++-- .../mailreaders/thunderbird/default.nix | 2 +- pkgs/applications/video/miro/default.nix | 4 ++-- .../gnome-3/3.22/misc/pomodoro/default.nix | 2 +- .../xfce/applications/xfce4-mixer.nix | 4 ++-- .../xfce/applications/xfce4-volumed.nix | 4 ++-- .../haskell-modules/hackage-packages.nix | 24 +++++++++---------- .../libraries/farsight2/default.nix | 4 ++-- .../gstreamer/legacy/gnonlin/default.nix | 4 ++-- .../gstreamer/legacy/gst-ffmpeg/default.nix | 4 ++-- .../legacy/gst-plugins-bad/default.nix | 4 ++-- .../legacy/gst-plugins-good/default.nix | 4 ++-- .../legacy/gst-plugins-ugly/default.nix | 4 ++-- .../gstreamer/legacy/gst-python/default.nix | 4 ++-- .../gstreamer/legacy/gstreamermm/default.nix | 4 ++-- .../gstreamer/legacy/qt-gstreamer/default.nix | 4 ++-- .../libraries/libcanberra/default.nix | 4 ++-- .../libraries/qt-4.x/4.8/default.nix | 4 ++-- .../libraries/wxGTK-2.8/default.nix | 4 ++-- .../libraries/wxGTK-2.9/default.nix | 4 ++-- .../libraries/wxGTK-3.0/default.nix | 4 ++-- pkgs/games/steam/runtime-wrapped.nix | 2 +- pkgs/os-specific/linux/bluez/bluez5.nix | 2 +- pkgs/os-specific/linux/bluez/bluez5_28.nix | 2 +- pkgs/os-specific/linux/bluez/default.nix | 2 +- pkgs/tools/networking/uget/default.nix | 4 ++-- pkgs/tools/security/tor/torbrowser.nix | 6 ++--- pkgs/top-level/aliases.nix | 1 + pkgs/top-level/all-packages.nix | 8 +++---- 40 files changed, 88 insertions(+), 87 deletions(-) diff --git a/pkgs/applications/audio/banshee/default.nix b/pkgs/applications/audio/banshee/default.nix index 1907d621e49..d1c0c2afa83 100644 --- a/pkgs/applications/audio/banshee/default.nix +++ b/pkgs/applications/audio/banshee/default.nix @@ -1,4 +1,4 @@ -{ pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst_plugins_base +{ pkgs, stdenv, lib, fetchurl, intltool, pkgconfig, gstreamer, gst-plugins-base , gst-plugins-good, gst-plugins-bad, gst-plugins-ugly, gst-ffmpeg, glib , mono, mono-addins, dbus-sharp-1_0, dbus-sharp-glib-1_0, notify-sharp, gtk-sharp-2_0 , boo, gdata-sharp, taglib-sharp, sqlite, gnome-sharp, gconf, gtk-sharp-beans, gio-sharp @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool ]; buildInputs = [ - gtk-sharp-2_0.gtk gstreamer gst_plugins_base gst-plugins-good + gtk-sharp-2_0.gtk gstreamer gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-ffmpeg mono dbus-sharp-1_0 dbus-sharp-glib-1_0 mono-addins notify-sharp gtk-sharp-2_0 boo gdata-sharp taglib-sharp sqlite gnome-sharp gconf gtk-sharp-beans diff --git a/pkgs/applications/audio/clementine/default.nix b/pkgs/applications/audio/clementine/default.nix index cf58dffef02..01c8ecaced0 100644 --- a/pkgs/applications/audio/clementine/default.nix +++ b/pkgs/applications/audio/clementine/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, boost, cmake, gettext, gstreamer, gst_plugins_base +{ stdenv, fetchurl, boost, cmake, gettext, gstreamer, gst-plugins-base , liblastfm, qt4, taglib, fftw, glew, qjson, sqlite, libgpod, libplist , usbmuxd, libmtp, gvfs, libcdio, libspotify, protobuf, qca2, pkgconfig , sparsehash, config, makeWrapper, runCommand, gst_plugins }: @@ -27,7 +27,7 @@ let fftw gettext glew - gst_plugins_base + gst-plugins-base gstreamer gvfs libcdio diff --git a/pkgs/applications/audio/morituri/default.nix b/pkgs/applications/audio/morituri/default.nix index 053c295be52..d4c67bb5622 100644 --- a/pkgs/applications/audio/morituri/default.nix +++ b/pkgs/applications/audio/morituri/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchgit, pythonPackages, cdparanoia, cdrdao -, gst-python, gst_plugins_base, gst-plugins-good +, gst-python, gst-plugins-base, gst-plugins-good , utillinux, makeWrapper, substituteAll, autoreconfHook }: let @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ python cdparanoia cdrdao utillinux makeWrapper - gst_plugins_base gst-plugins-good + gst-plugins-base gst-plugins-good ] ++ pythonPath; patches = [ diff --git a/pkgs/applications/audio/quodlibet/default.nix b/pkgs/applications/audio/quodlibet/default.nix index 2d97ba1d763..fa582d85215 100644 --- a/pkgs/applications/audio/quodlibet/default.nix +++ b/pkgs/applications/audio/quodlibet/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchurl, python2Packages, intltool -, gst-python, withGstPlugins ? false, gst_plugins_base ? null +, gst-python, withGstPlugins ? false, gst-plugins-base ? null , gst-plugins-good ? null, gst-plugins-ugly ? null, gst-plugins-bad ? null }: -assert withGstPlugins -> gst_plugins_base != null +assert withGstPlugins -> gst-plugins-base != null || gst-plugins-good != null || gst-plugins-ugly != null || gst-plugins-bad != null; @@ -44,7 +44,7 @@ in buildPythonApplication { patches = [ ./quodlibet-package-plugins.patch ]; buildInputs = stdenv.lib.optionals withGstPlugins [ - gst_plugins_base gst-plugins-good gst-plugins-ugly gst-plugins-bad + gst-plugins-base gst-plugins-good gst-plugins-ugly gst-plugins-bad ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/audio/transcribe/default.nix b/pkgs/applications/audio/transcribe/default.nix index 3eca141ee62..5ec5087b9f2 100644 --- a/pkgs/applications/audio/transcribe/default.nix +++ b/pkgs/applications/audio/transcribe/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchzip, lib, makeWrapper, alsaLib, atk, cairo, gdk_pixbuf -, glib, gst-ffmpeg, gst-plugins-bad, gst_plugins_base +, glib, gst-ffmpeg, gst-plugins-bad, gst-plugins-base , gst-plugins-good, gst-plugins-ugly, gstreamer, gtk2, libSM, libX11 , libpng12, pango, zlib }: @@ -21,14 +21,14 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ gst_plugins_base gst-plugins-good + buildInputs = [ gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-ffmpeg ]; dontPatchELF = true; libPath = lib.makeLibraryPath [ stdenv.cc.cc glib gtk2 atk pango cairo gdk_pixbuf alsaLib - libX11 libSM libpng12 gstreamer gst_plugins_base zlib + libX11 libSM libpng12 gstreamer gst-plugins-base zlib ]; installPhase = '' diff --git a/pkgs/applications/networking/browsers/firefox-bin/default.nix b/pkgs/applications/networking/browsers/firefox-bin/default.nix index 80197999f5a..01cd7a1df38 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/default.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/default.nix @@ -12,7 +12,7 @@ , gdk_pixbuf , glib , glibc -, gst_plugins_base +, gst-plugins-base , gstreamer , gtk2 , gtk3 @@ -94,7 +94,7 @@ stdenv.mkDerivation { gdk_pixbuf glib glibc - gst_plugins_base + gst-plugins-base gstreamer gtk2 gtk3 diff --git a/pkgs/applications/networking/browsers/firefox/default.nix b/pkgs/applications/networking/browsers/firefox/default.nix index a01cde4d6de..f2da6257efd 100644 --- a/pkgs/applications/networking/browsers/firefox/default.nix +++ b/pkgs/applications/networking/browsers/firefox/default.nix @@ -3,7 +3,7 @@ , freetype, fontconfig, file, alsaLib, nspr, nss, libnotify , yasm, mesa, sqlite, unzip, makeWrapper , hunspell, libevent, libstartup_notification, libvpx -, cairo, gstreamer, gst_plugins_base, icu, libpng, jemalloc, libpulseaudio +, cairo, gstreamer, gst-plugins-base, icu, libpng, jemalloc, libpulseaudio , autoconf213, which , writeScript, xidel, common-updater-scripts, coreutils, gnused, gnugrep, curl , enableGTK3 ? false @@ -42,7 +42,7 @@ common = { pname, version, sha512, updateScript }: stdenv.mkDerivation rec { libpulseaudio # only headers are needed ] ++ lib.optional enableGTK3 gtk3 - ++ lib.optionals (!passthru.ffmpegSupport) [ gstreamer gst_plugins_base ]; + ++ lib.optionals (!passthru.ffmpegSupport) [ gstreamer gst-plugins-base ]; nativeBuildInputs = [ autoconf213 which gnused ]; diff --git a/pkgs/applications/networking/browsers/palemoon/default.nix b/pkgs/applications/networking/browsers/palemoon/default.nix index de21c37bc79..73a82841360 100644 --- a/pkgs/applications/networking/browsers/palemoon/default.nix +++ b/pkgs/applications/networking/browsers/palemoon/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, makeDesktopItem , pkgconfig, autoconf213, alsaLib, bzip2, cairo , dbus, dbus_glib, file, fontconfig, freetype -, gstreamer, gst_plugins_base, gst_all_1 +, gstreamer, gst-plugins-base, gst_all_1 , gtk2, hunspell, icu, libevent, libjpeg, libnotify , libstartup_notification, libvpx, makeWrapper, mesa , nspr, nss, pango, perl, python, libpulseaudio, sqlite @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { buildInputs = [ alsaLib bzip2 cairo dbus dbus_glib file fontconfig freetype - gst_plugins_base gstreamer gst_all_1.gst-plugins-base gtk2 + gst-plugins-base gstreamer gst_all_1.gst-plugins-base gtk2 hunspell icu libevent libjpeg libnotify libstartup_notification libvpx makeWrapper mesa nspr nss pango perl pkgconfig python libpulseaudio sqlite unzip which yasm zip zlib diff --git a/pkgs/applications/networking/browsers/vivaldi/default.nix b/pkgs/applications/networking/browsers/vivaldi/default.nix index 0531a58f0a2..ab010653c64 100644 --- a/pkgs/applications/networking/browsers/vivaldi/default.nix +++ b/pkgs/applications/networking/browsers/vivaldi/default.nix @@ -3,7 +3,7 @@ , alsaLib, dbus_libs, cups, libexif, ffmpeg, systemd , freetype, fontconfig, libXft, libXrender, libxcb, expat, libXau, libXdmcp , libuuid, xz -, gstreamer, gst_plugins_base, libxml2 +, gstreamer, gst-plugins-base, libxml2 , glib, gtk2, pango, gdk_pixbuf, cairo, atk, gnome3 , nss, nspr , patchelf @@ -41,7 +41,7 @@ in stdenv.mkDerivation rec { libXi libXft libXcursor libXfixes libXScrnSaver libXcomposite libXdamage libXtst libXrandr atk alsaLib dbus_libs cups gtk2 gdk_pixbuf libexif ffmpeg systemd freetype fontconfig libXrender libuuid expat glib nss nspr - gstreamer libxml2 gst_plugins_base pango cairo gnome3.gconf + gstreamer libxml2 gst-plugins-base pango cairo gnome3.gconf patchelf ]; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index a7ddfd1ae41..2b831cdcaaf 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -1,5 +1,5 @@ {stdenv, fetchurl, zlib, openssl, libre, librem, pkgconfig -, cairo, mpg123, gstreamer, gst-ffmpeg, gst_plugins_base, gst-plugins-bad +, cairo, mpg123, gstreamer, gst-ffmpeg, gst-plugins-base, gst-plugins-bad , gst-plugins-good, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg , gsm, speex, portaudio, spandsp, libuuid, ccache }: @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "0dhlgjkqn7jkd1pmdyid41c829clzmi5kczjdwxzh5ygn95lydjc"; }; buildInputs = [zlib openssl libre librem pkgconfig - cairo mpg123 gstreamer gst-ffmpeg gst_plugins_base gst-plugins-bad gst-plugins-good + cairo mpg123 gstreamer gst-ffmpeg gst-plugins-base gst-plugins-bad gst-plugins-good alsaLib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid ccache ]; diff --git a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix index 85dbd5f8d8f..067b1c7884a 100644 --- a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix +++ b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix @@ -2,7 +2,7 @@ , fetchurl , gcc , glib -, gst_plugins_base +, gst-plugins-base , gstreamer , icu , libpulseaudio @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { alsaLib gcc.cc glib - gst_plugins_base + gst-plugins-base gstreamer icu libpulseaudio diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix index 2bc65226c5f..1b9c1ac1622 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix @@ -13,7 +13,7 @@ , gdk_pixbuf , glib , glibc -, gst_plugins_base +, gst-plugins-base , gstreamer , gtk2 , kerberos @@ -91,7 +91,7 @@ stdenv.mkDerivation { gdk_pixbuf glib glibc - gst_plugins_base + gst-plugins-base gstreamer gtk2 kerberos diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix index f71a6dff37c..d4ddfcfc4a6 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix @@ -3,7 +3,7 @@ , freetype, fontconfig, file, alsaLib, nspr, nss, libnotify , yasm, mesa, sqlite, unzip, makeWrapper , hunspell, libevent, libstartup_notification, libvpx -, cairo, gstreamer, gst_plugins_base, icu +, cairo, gstreamer, gst-plugins-base, icu , writeScript, xidel, common-updater-scripts, coreutils, gnused, gnugrep, curl , debugBuild ? false , # If you want the resulting program to call itself "Thunderbird" diff --git a/pkgs/applications/video/miro/default.nix b/pkgs/applications/video/miro/default.nix index 8a033d7761a..0efa4aba276 100644 --- a/pkgs/applications/video/miro/default.nix +++ b/pkgs/applications/video/miro/default.nix @@ -2,7 +2,7 @@ , pythonPackages, pyrex096, ffmpeg, boost, glib, gtk2, webkitgtk2, libsoup , taglib, sqlite , libtorrentRasterbar, glib_networking, gsettings_desktop_schemas -, gst-python, gst_plugins_base, gst-plugins-good, gst-ffmpeg +, gst-python, gst-plugins-base, gst-plugins-good, gst-ffmpeg , enableBonjour ? false, avahi ? null }: @@ -77,7 +77,7 @@ in buildPythonApplication rec { propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pycurl mutagen pycairo dbus-python pywebkitgtk] ++ [ libtorrentRasterbar - gst-python gst_plugins_base gst-plugins-good gst-ffmpeg + gst-python gst-plugins-base gst-plugins-good gst-ffmpeg ] ++ optional enableBonjour avahi; meta = { diff --git a/pkgs/desktops/gnome-3/3.22/misc/pomodoro/default.nix b/pkgs/desktops/gnome-3/3.22/misc/pomodoro/default.nix index 8c1ab41de52..3ceabe70ad8 100644 --- a/pkgs/desktops/gnome-3/3.22/misc/pomodoro/default.nix +++ b/pkgs/desktops/gnome-3/3.22/misc/pomodoro/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, which, automake113x, intltool, pkgconfig, libtool, makeWrapper, - dbus_glib, libcanberra_gtk2, gst_all_1, vala_0_32, gnome3, gtk3, gst_plugins_base, + dbus_glib, libcanberra_gtk2, gst_all_1, vala_0_32, gnome3, gtk3, gst-plugins-base, glib, gobjectIntrospection, telepathy_glib }: diff --git a/pkgs/desktops/xfce/applications/xfce4-mixer.nix b/pkgs/desktops/xfce/applications/xfce4-mixer.nix index f14a2037184..05a5fa4a6fc 100644 --- a/pkgs/desktops/xfce/applications/xfce4-mixer.nix +++ b/pkgs/desktops/xfce/applications/xfce4-mixer.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, makeWrapper -, glib, gstreamer, gst_plugins_base, gtk +, glib, gstreamer, gst-plugins-base, gtk , libxfce4util, libxfce4ui, xfce4panel, xfconf, libunique ? null , pulseaudioSupport ? false, gst-plugins-good }: @@ -7,7 +7,7 @@ let # The usual Gstreamer plugins package has a zillion dependencies # that we don't need for a simple mixer, so build a minimal package. - gst_plugins_minimal = gst_plugins_base.override { + gst_plugins_minimal = gst-plugins-base.override { minimalDeps = true; }; gst_plugins_pulse = gst-plugins-good.override { diff --git a/pkgs/desktops/xfce/applications/xfce4-volumed.nix b/pkgs/desktops/xfce/applications/xfce4-volumed.nix index b603229e938..8e4f952438f 100644 --- a/pkgs/desktops/xfce/applications/xfce4-volumed.nix +++ b/pkgs/desktops/xfce/applications/xfce4-volumed.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pkgconfig, makeWrapper -, gstreamer, gtk2, gst_plugins_base, libnotify +, gstreamer, gtk2, gst-plugins-base, libnotify , keybinder, xfconf }: let # The usual Gstreamer plugins package has a zillion dependencies # that we don't need for a simple mixer, so build a minimal package. - gst_plugins_minimal = gst_plugins_base.override { + gst_plugins_minimal = gst-plugins-base.override { minimalDeps = true; }; diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix index 6feed8f5c98..d31dc82822c 100644 --- a/pkgs/development/haskell-modules/hackage-packages.nix +++ b/pkgs/development/haskell-modules/hackage-packages.nix @@ -69335,7 +69335,7 @@ self: { "gi-gstaudio" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, gi-gst, gi-gstbase, gobjectIntrospection - , gst_plugins_base, haskell-gi, haskell-gi-base, text, transformers + , gst-plugins-base, haskell-gi, haskell-gi-base, text, transformers }: mkDerivation { pname = "gi-gstaudio"; @@ -69347,18 +69347,18 @@ self: { haskell-gi haskell-gi-base text transformers ]; librarySystemDepends = [ gobjectIntrospection ]; - libraryPkgconfigDepends = [ gst_plugins_base ]; + libraryPkgconfigDepends = [ gst-plugins-base ]; doHaddock = false; homepage = "https://github.com/haskell-gi/haskell-gi"; description = "GStreamerAudio bindings"; license = stdenv.lib.licenses.lgpl21; hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) gobjectIntrospection; - gst_plugins_base = pkgs.gst_all_1.gst-plugins-base;}; + gst-plugins-base = pkgs.gst_all_1.gst-plugins-base;}; "gi-gstbase" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, gi-gst, gobjectIntrospection, gst_plugins_base + , gi-gobject, gi-gst, gobjectIntrospection, gst-plugins-base , haskell-gi, haskell-gi-base, text, transformers }: mkDerivation { @@ -69371,19 +69371,19 @@ self: { haskell-gi-base text transformers ]; librarySystemDepends = [ gobjectIntrospection ]; - libraryPkgconfigDepends = [ gst_plugins_base ]; + libraryPkgconfigDepends = [ gst-plugins-base ]; doHaddock = false; homepage = "https://github.com/haskell-gi/haskell-gi"; description = "GStreamerBase bindings"; license = stdenv.lib.licenses.lgpl21; hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) gobjectIntrospection; - gst_plugins_base = pkgs.gst_all_1.gst-plugins-base;}; + gst-plugins-base = pkgs.gst_all_1.gst-plugins-base;}; "gi-gstvideo" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, gi-gst, gi-gstbase, gobjectIntrospection - , gst_plugins_base, haskell-gi, haskell-gi-base, text, transformers + , gst-plugins-base, haskell-gi, haskell-gi-base, text, transformers }: mkDerivation { pname = "gi-gstvideo"; @@ -69395,14 +69395,14 @@ self: { haskell-gi haskell-gi-base text transformers ]; librarySystemDepends = [ gobjectIntrospection ]; - libraryPkgconfigDepends = [ gst_plugins_base ]; + libraryPkgconfigDepends = [ gst-plugins-base ]; doHaddock = false; homepage = "https://github.com/haskell-gi/haskell-gi"; description = "GStreamerVideo bindings"; license = stdenv.lib.licenses.lgpl21; hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) gobjectIntrospection; - gst_plugins_base = pkgs.gst_all_1.gst-plugins-base;}; + gst-plugins-base = pkgs.gst_all_1.gst-plugins-base;}; "gi-gtk" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk @@ -76588,7 +76588,7 @@ self: { "gstreamer" = callPackage ({ mkDerivation, array, base, bytestring, Cabal, directory, glib - , gst_plugins_base, gstreamer, gtk2hs-buildtools, mtl + , gst-plugins-base, gstreamer, gtk2hs-buildtools, mtl }: mkDerivation { pname = "gstreamer"; @@ -76598,11 +76598,11 @@ self: { libraryHaskellDepends = [ array base bytestring directory glib mtl ]; - libraryPkgconfigDepends = [ gst_plugins_base gstreamer ]; + libraryPkgconfigDepends = [ gst-plugins-base gstreamer ]; homepage = "http://projects.haskell.org/gtk2hs/"; description = "Binding to the GStreamer open source multimedia framework"; license = stdenv.lib.licenses.lgpl21; - }) {inherit (pkgs) gst_plugins_base; inherit (pkgs) gstreamer;}; + }) {inherit (pkgs) gst-plugins-base; inherit (pkgs) gstreamer;}; "gt-tools" = callPackage ({ mkDerivation, base, containers, extensible-exceptions, haskeline diff --git a/pkgs/development/libraries/farsight2/default.nix b/pkgs/development/libraries/farsight2/default.nix index da6c799ae8b..9ff57257e03 100644 --- a/pkgs/development/libraries/farsight2/default.nix +++ b/pkgs/development/libraries/farsight2/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, libnice, pkgconfig, python2Packages, gstreamer, gst_plugins_base +{ stdenv, fetchurl, libnice, pkgconfig, python2Packages, gstreamer, gst-plugins-base , gst-python, gupnp_igd }: let @@ -15,7 +15,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ]; - propagatedBuildInputs = [ gstreamer gst_plugins_base ]; + propagatedBuildInputs = [ gstreamer gst-plugins-base ]; meta = { homepage = http://farsight.freedesktop.org/wiki/; diff --git a/pkgs/development/libraries/gstreamer/legacy/gnonlin/default.nix b/pkgs/development/libraries/gstreamer/legacy/gnonlin/default.nix index 2e30782f44b..0e8dfec65f4 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gnonlin/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gnonlin/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, gst_plugins_base, gstreamer }: +{ stdenv, fetchurl, pkgconfig, gst-plugins-base, gstreamer }: stdenv.mkDerivation rec { name = "gnonlin-0.10.17"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "0dc9kvr6i7sh91cyhzlbx2bchwg84rfa4679ccppzjf0y65dv8p4"; }; - buildInputs = [ gst_plugins_base gstreamer pkgconfig ]; + buildInputs = [ gst-plugins-base gstreamer pkgconfig ]; meta = { homepage = "http://gstreamer.freedesktop.org/modules/gnonlin.html"; diff --git a/pkgs/development/libraries/gstreamer/legacy/gst-ffmpeg/default.nix b/pkgs/development/libraries/gstreamer/legacy/gst-ffmpeg/default.nix index 18d483594ef..484075f73f7 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gst-ffmpeg/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gst-ffmpeg/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, pkgconfig, gst_plugins_base, bzip2, yasm, orc +{ fetchurl, stdenv, pkgconfig, gst-plugins-base, bzip2, yasm, orc , useInternalFfmpeg ? false, ffmpeg ? null }: stdenv.mkDerivation rec { @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { configureFlags = stdenv.lib.optionalString (!useInternalFfmpeg) "--with-system-ffmpeg"; buildInputs = - [ pkgconfig bzip2 gst_plugins_base orc ] + [ pkgconfig bzip2 gst-plugins-base orc ] ++ (if useInternalFfmpeg then [ yasm ] else [ ffmpeg ]); meta = { diff --git a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-bad/default.nix b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-bad/default.nix index 988d1bba258..fecc77b2a54 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-bad/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-bad/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, pkgconfig, glib, gstreamer, gst_plugins_base +{ fetchurl, stdenv, pkgconfig, glib, gstreamer, gst-plugins-base , libdvdnav, libdvdread, orc }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = - [ pkgconfig glib gstreamer gst_plugins_base libdvdnav libdvdread orc ]; + [ pkgconfig glib gstreamer gst-plugins-base libdvdnav libdvdread orc ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-good/default.nix b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-good/default.nix index af6e3be401b..9339de3d9ed 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-good/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-good/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, lib, pkgconfig, gst_plugins_base, aalib, cairo +{ fetchurl, stdenv, lib, pkgconfig, gst-plugins-base, aalib, cairo , flac, libjpeg, zlib, speex, libpng, libdv, libcaca, libvpx , libiec61883, libavc1394, taglib, libpulseaudio, gdk_pixbuf, orc , glib, gstreamer, bzip2, libsoup, libshout, ncurses, libintlOrEmpty @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--enable-experimental" "--disable-oss" ]; buildInputs = - [ pkgconfig glib gstreamer gst_plugins_base ] + [ pkgconfig glib gstreamer gst-plugins-base ] ++ lib.optional stdenv.isLinux libpulseaudio ++ libintlOrEmpty ++ lib.optionals (!minimalDeps) diff --git a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-ugly/default.nix b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-ugly/default.nix index 8e4e662dc3b..9863b3e0128 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gst-plugins-ugly/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gst-plugins-ugly/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, pkgconfig, glib, gstreamer, gst_plugins_base +{ fetchurl, stdenv, pkgconfig, glib, gstreamer, gst-plugins-base , libmad, libdvdread, libmpeg2, libcdio, a52dec, x264, orc, lame, libintlOrEmpty }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { }; buildInputs = - [ pkgconfig glib gstreamer gst_plugins_base libmad libdvdread a52dec x264 orc lame ] ++ libintlOrEmpty; + [ pkgconfig glib gstreamer gst-plugins-base libmad libdvdread a52dec x264 orc lame ] ++ libintlOrEmpty; NIX_LDFLAGS = if stdenv.isDarwin then "-lintl" else null; diff --git a/pkgs/development/libraries/gstreamer/legacy/gst-python/default.nix b/pkgs/development/libraries/gstreamer/legacy/gst-python/default.nix index d78b50a7821..fd01aa5c1dc 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gst-python/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gst-python/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, pkgconfig, python2Packages, gstreamer, gst_plugins_base +{ fetchurl, stdenv, pkgconfig, python2Packages, gstreamer, gst-plugins-base }: let @@ -21,7 +21,7 @@ in stdenv.mkDerivation rec { patches = [ ./disable-testFake.patch ]; buildInputs = - [ pkgconfig gst_plugins_base pygobject2 ] + [ pkgconfig gst-plugins-base pygobject2 ] ; propagatedBuildInputs = [ gstreamer python ]; diff --git a/pkgs/development/libraries/gstreamer/legacy/gstreamermm/default.nix b/pkgs/development/libraries/gstreamer/legacy/gstreamermm/default.nix index ce6ae931836..f181aa029bd 100644 --- a/pkgs/development/libraries/gstreamer/legacy/gstreamermm/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/gstreamermm/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, glibmm, gstreamer, gst_plugins_base, libsigcxx, libxmlxx, pkgconfig }: +{ stdenv, fetchurl, glibmm, gstreamer, gst-plugins-base, libsigcxx, libxmlxx, pkgconfig }: let ver_maj = "0.10"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { doCheck = false; # Tests require pulseaudio in /homeless-shelter propagatedBuildInputs = [ - glibmm gstreamer gst_plugins_base libsigcxx libxmlxx + glibmm gstreamer gst-plugins-base libsigcxx libxmlxx ]; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/gstreamer/legacy/qt-gstreamer/default.nix b/pkgs/development/libraries/gstreamer/legacy/qt-gstreamer/default.nix index c0cab607062..d298fbd7fc3 100644 --- a/pkgs/development/libraries/gstreamer/legacy/qt-gstreamer/default.nix +++ b/pkgs/development/libraries/gstreamer/legacy/qt-gstreamer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, gstreamer, gst_plugins_base, boost, glib, qt4, cmake +{ stdenv, fetchurl, gstreamer, gst-plugins-base, boost, glib, qt4, cmake , automoc4, flex, bison, pkgconfig }: stdenv.mkDerivation rec { @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "1pqg9sxzk8sdrf7pazb5v21hasqai9i4l203gbdqz29w2ll1ybsl"; }; - buildInputs = [ gstreamer gst_plugins_base glib qt4 ]; + buildInputs = [ gstreamer gst-plugins-base glib qt4 ]; propagatedBuildInputs = [ boost ]; nativeBuildInputs = [ cmake automoc4 flex bison pkgconfig ]; diff --git a/pkgs/development/libraries/libcanberra/default.nix b/pkgs/development/libraries/libcanberra/default.nix index 8e3523a27e9..25be4802699 100644 --- a/pkgs/development/libraries/libcanberra/default.nix +++ b/pkgs/development/libraries/libcanberra/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, libtool, gtk ? null, libcap -, alsaLib, libpulseaudio, gstreamer, gst_plugins_base, libvorbis }: +, alsaLib, libpulseaudio, gstreamer, gst-plugins-base, libvorbis }: stdenv.mkDerivation rec { name = "libcanberra-0.30"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig libtool alsaLib libpulseaudio libvorbis gtk libcap - /*gstreamer gst_plugins_base*/ # ToDo: gstreamer not found (why?), add (g)udev? + /*gstreamer gst-plugins-base*/ # ToDo: gstreamer not found (why?), add (g)udev? ]; configureFlags = "--disable-oss"; diff --git a/pkgs/development/libraries/qt-4.x/4.8/default.nix b/pkgs/development/libraries/qt-4.x/4.8/default.nix index 8c8e311a93e..0860a90192f 100644 --- a/pkgs/development/libraries/qt-4.x/4.8/default.nix +++ b/pkgs/development/libraries/qt-4.x/4.8/default.nix @@ -3,7 +3,7 @@ , libXfixes, libXrandr, libSM, freetype, fontconfig, zlib, libjpeg, libpng , libmng, which, mesaSupported, mesa, mesa_glu, openssl, dbus, cups, pkgconfig , libtiff, glib, icu, mysql, postgresql, sqlite, perl, coreutils, libXi -, buildMultimedia ? stdenv.isLinux, alsaLib, gstreamer, gst_plugins_base +, buildMultimedia ? stdenv.isLinux, alsaLib, gstreamer, gst-plugins-base , buildWebkit ? (stdenv.isLinux || stdenv.isDarwin) , flashplayerFix ? false, gdk_pixbuf , gtkStyle ? false, libgnomeui, gtk2, GConf, gnome_vfs @@ -138,7 +138,7 @@ stdenv.mkDerivation rec { # Qt doesn't directly need GLU (just GL), but many apps use, it's small and doesn't remain a runtime-dep if not used ++ optional mesaSupported mesa_glu ++ optional ((buildWebkit || buildMultimedia) && stdenv.isLinux ) alsaLib - ++ optionals (buildWebkit || buildMultimedia) [ gstreamer gst_plugins_base ]; + ++ optionals (buildWebkit || buildMultimedia) [ gstreamer gst-plugins-base ]; # The following libraries are only used in plugins buildInputs = diff --git a/pkgs/development/libraries/wxGTK-2.8/default.nix b/pkgs/development/libraries/wxGTK-2.8/default.nix index 6b9aa458735..cbfdf876dba 100644 --- a/pkgs/development/libraries/wxGTK-2.8/default.nix +++ b/pkgs/development/libraries/wxGTK-2.8/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk2, libXinerama, libSM, libXxf86vm, xf86vidmodeproto -, gstreamer, gst_plugins_base, GConf, libX11, cairo +, gstreamer, gst-plugins-base, GConf, libX11, cairo , withMesa ? true, mesa ? null, compat24 ? false, compat26 ? true, unicode ? true, }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { sha256 = "1l1w4i113csv3bd5r8ybyj0qpxdq83lj6jrc5p7cc10mkwyiagqz"; }; - buildInputs = [ gtk2 libXinerama libSM libXxf86vm xf86vidmodeproto gstreamer gst_plugins_base GConf libX11 cairo ] + buildInputs = [ gtk2 libXinerama libSM libXxf86vm xf86vidmodeproto gstreamer gst-plugins-base GConf libX11 cairo ] ++ optional withMesa mesa; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/wxGTK-2.9/default.nix b/pkgs/development/libraries/wxGTK-2.9/default.nix index b2f40978f51..e19f0bc3a76 100644 --- a/pkgs/development/libraries/wxGTK-2.9/default.nix +++ b/pkgs/development/libraries/wxGTK-2.9/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, gtk2, libXinerama, libSM, libXxf86vm, xf86vidmodeproto -, gstreamer, gst_plugins_base, GConf, setfile +, gstreamer, gst-plugins-base, GConf, setfile , withMesa ? true, mesa ? null, compat24 ? false, compat26 ? true, unicode ? true , Carbon ? null, Cocoa ? null, Kernel ? null, QuickTime ? null, AGL ? null }: @@ -21,7 +21,7 @@ stdenv.mkDerivation { buildInputs = [ gtk2 libXinerama libSM libXxf86vm xf86vidmodeproto gstreamer - gst_plugins_base GConf ] + gst-plugins-base GConf ] ++ optional withMesa mesa ++ optionals stdenv.isDarwin [ setfile Carbon Cocoa Kernel QuickTime ]; diff --git a/pkgs/development/libraries/wxGTK-3.0/default.nix b/pkgs/development/libraries/wxGTK-3.0/default.nix index ed937272514..f40595d4eac 100644 --- a/pkgs/development/libraries/wxGTK-3.0/default.nix +++ b/pkgs/development/libraries/wxGTK-3.0/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, fetchpatch, pkgconfig, gtk2, libXinerama, libSM, libXxf86vm -, xf86vidmodeproto , gstreamer, gst_plugins_base, GConf, setfile +, xf86vidmodeproto , gstreamer, gst-plugins-base, GConf, setfile , withMesa ? true, mesa ? null, compat24 ? false, compat26 ? true, unicode ? true , withWebKit ? false, webkitgtk2 ? null , AGL ? null, Carbon ? null, Cocoa ? null, Kernel ? null, QTKit ? null @@ -24,7 +24,7 @@ stdenv.mkDerivation { buildInputs = [ gtk2 libXinerama libSM libXxf86vm xf86vidmodeproto gstreamer - gst_plugins_base GConf ] + gst-plugins-base GConf ] ++ optional withMesa mesa ++ optional withWebKit webkitgtk2 ++ optionals stdenv.isDarwin [ setfile Carbon Cocoa Kernel QTKit ]; diff --git a/pkgs/games/steam/runtime-wrapped.nix b/pkgs/games/steam/runtime-wrapped.nix index d9d6e0ecf0d..1988463d61a 100644 --- a/pkgs/games/steam/runtime-wrapped.nix +++ b/pkgs/games/steam/runtime-wrapped.nix @@ -78,7 +78,7 @@ let SDL2_ttf SDL2_mixer gstreamer - gst_plugins_base + gst-plugins-base ] ++ lib.optional (!newStdcpp) gcc48.cc; overridePkgs = with pkgs; [ diff --git a/pkgs/os-specific/linux/bluez/bluez5.nix b/pkgs/os-specific/linux/bluez/bluez5.nix index b5429812441..6185e22fb87 100644 --- a/pkgs/os-specific/linux/bluez/bluez5.nix +++ b/pkgs/os-specific/linux/bluez/bluez5.nix @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { readline libsndfile udev libical # Disables GStreamer; not clear what it gains us other than a # zillion extra dependencies. - # gstreamer gst_plugins_base + # gstreamer gst-plugins-base ]; outputs = [ "out" "dev" "test" ]; diff --git a/pkgs/os-specific/linux/bluez/bluez5_28.nix b/pkgs/os-specific/linux/bluez/bluez5_28.nix index 8cd5e064e1e..11aee0d88f2 100644 --- a/pkgs/os-specific/linux/bluez/bluez5_28.nix +++ b/pkgs/os-specific/linux/bluez/bluez5_28.nix @@ -22,7 +22,7 @@ in stdenv.mkDerivation rec { readline libsndfile udev libical # Disables GStreamer; not clear what it gains us other than a # zillion extra dependencies. - # gstreamer gst_plugins_base + # gstreamer gst-plugins-base ]; preConfigure = '' diff --git a/pkgs/os-specific/linux/bluez/default.nix b/pkgs/os-specific/linux/bluez/default.nix index d0a875516fa..20b8d01db2d 100644 --- a/pkgs/os-specific/linux/bluez/default.nix +++ b/pkgs/os-specific/linux/bluez/default.nix @@ -20,7 +20,7 @@ in stdenv.mkDerivation rec { readline libsndfile # Disables GStreamer; not clear what it gains us other than a # zillion extra dependencies. - # gstreamer gst_plugins_base + # gstreamer gst-plugins-base ]; configureFlags = [ diff --git a/pkgs/tools/networking/uget/default.nix b/pkgs/tools/networking/uget/default.nix index 8a60858526e..b5119bc594b 100644 --- a/pkgs/tools/networking/uget/default.nix +++ b/pkgs/tools/networking/uget/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, pkgconfig, intltool, openssl, curl, libnotify, gstreamer, - gst_plugins_base, gst-plugins-good, gnome3, makeWrapper, aria2 ? null }: + gst-plugins-base, gst-plugins-good, gnome3, makeWrapper, aria2 ? null }: stdenv.mkDerivation rec { name = "uget-${version}"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig intltool makeWrapper ]; buildInputs = [ - openssl curl libnotify gstreamer gst_plugins_base gst-plugins-good + openssl curl libnotify gstreamer gst-plugins-base gst-plugins-good gnome3.gtk gnome3.dconf ] ++ (stdenv.lib.optional (aria2 != null) aria2); diff --git a/pkgs/tools/security/tor/torbrowser.nix b/pkgs/tools/security/tor/torbrowser.nix index 12df8db832c..fc77628a3c6 100644 --- a/pkgs/tools/security/tor/torbrowser.nix +++ b/pkgs/tools/security/tor/torbrowser.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeDesktopItem , libXrender, libX11, libXext, libXt, alsaLib, dbus, dbus_glib, glib, gtk2 , atk, pango, freetype, fontconfig, gdk_pixbuf, cairo, zlib -, gstreamer, gst_plugins_base, gst-plugins-good, gst-ffmpeg, gmp, ffmpeg +, gstreamer, gst-plugins-base, gst-plugins-good, gst-ffmpeg, gmp, ffmpeg , libpulseaudio , mediaSupport ? false }: @@ -11,12 +11,12 @@ let stdenv.cc.cc zlib glib alsaLib dbus dbus_glib gtk2 atk pango freetype fontconfig gdk_pixbuf cairo libXrender libX11 libXext libXt ] ++ stdenv.lib.optionals mediaSupport [ - gstreamer gst_plugins_base gmp ffmpeg + gstreamer gst-plugins-base gmp ffmpeg libpulseaudio ]); # Ignored if !mediaSupport - gstPlugins = [ gstreamer gst_plugins_base gst-plugins-good gst-ffmpeg ]; + gstPlugins = [ gstreamer gst-plugins-base gst-plugins-good gst-ffmpeg ]; gstPluginsPath = stdenv.lib.concatMapStringsSep ":" (x: "${x}/lib/gstreamer-0.10") gstPlugins; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index efeb14eb417..eaf6813263a 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -53,6 +53,7 @@ doNotDisplayTwice rec { googleAuthenticator = google-authenticator; # added 2016-10-16 grantlee5 = qt5.grantlee; # added 2015-12-19 gst_ffmpeg = gst-ffmpeg; # added 2017-02 + gst_plugins_base = gst-plugins-base; # added 2017-02 gst_plugins_good = gst-plugins-good; # added 2017-02 gst_plugins_bad = gst-plugins-bad; # added 2017-02 gst_plugins_ugly = gst-plugins-ugly; # added 2017-02 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index acd872768a2..61949c9b4d9 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -1151,7 +1151,7 @@ with pkgs; clementine = callPackage ../applications/audio/clementine { boost = boost155; - gst_plugins = [ gst_plugins_base gst-plugins-good gst-plugins-ugly gst-ffmpeg ]; + gst_plugins = [ gst-plugins-base gst-plugins-good gst-plugins-ugly gst-ffmpeg ]; }; clementineFree = clementine.free; @@ -7519,14 +7519,14 @@ with pkgs; gst_all = { inherit (pkgs) gstreamer gnonlin gst-python qt-gstreamer; - gstPluginsBase = pkgs.gst_plugins_base; + gstPluginsBase = pkgs.gst-plugins-base; gstPluginsBad = pkgs.gst-plugins-bad; gstPluginsGood = pkgs.gst-plugins-good; gstPluginsUgly = pkgs.gst-plugins-ugly; gstFfmpeg = pkgs.gst-ffmpeg; # aliases with the dashed naming, same as in gst_all_1 - gst-plugins-base = pkgs.gst_plugins_base; + gst-plugins-base = pkgs.gst-plugins-base; gst-plugins-bad = pkgs.gst-plugins-bad; gst-plugins-good = pkgs.gst-plugins-good; gst-plugins-ugly = pkgs.gst-plugins-ugly; @@ -7537,7 +7537,7 @@ with pkgs; bison = bison2; }; - gst_plugins_base = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-base { + gst-plugins-base = callPackage ../development/libraries/gstreamer/legacy/gst-plugins-base { inherit (darwin.apple_sdk.frameworks) ApplicationServices; }; From 5dde5ded099969e0e75a9ee0f1d4b5bcd5301245 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 12:37:42 +0100 Subject: [PATCH 143/216] zkfuse: remove applied patch --- pkgs/servers/zookeeper/default.nix | 3 ++- pkgs/tools/filesystems/zkfuse/default.nix | 11 +++-------- .../tools/filesystems/zkfuse/zookeeper-1929.patch | 15 --------------- 3 files changed, 5 insertions(+), 24 deletions(-) delete mode 100644 pkgs/tools/filesystems/zkfuse/zookeeper-1929.patch diff --git a/pkgs/servers/zookeeper/default.nix b/pkgs/servers/zookeeper/default.nix index 4eecfa41810..16807a6571c 100644 --- a/pkgs/servers/zookeeper/default.nix +++ b/pkgs/servers/zookeeper/default.nix @@ -1,7 +1,8 @@ { stdenv, fetchurl, jre, makeWrapper, bash }: stdenv.mkDerivation rec { - name = "zookeeper-3.4.9"; + name = "zookeeper-${version}"; + version = "3.4.9"; src = fetchurl { url = "mirror://apache/zookeeper/${name}/${name}.tar.gz"; diff --git a/pkgs/tools/filesystems/zkfuse/default.nix b/pkgs/tools/filesystems/zkfuse/default.nix index 04755108bc0..0738ee84cab 100644 --- a/pkgs/tools/filesystems/zkfuse/default.nix +++ b/pkgs/tools/filesystems/zkfuse/default.nix @@ -1,15 +1,10 @@ { stdenv, lib, zookeeper, zookeeper_mt, fuse, pkgconfig, autoreconfHook, log4cxx, boost, tree }: stdenv.mkDerivation rec { - name = "zkfuse"; + name = "zkfuse-${version}"; + inherit (zookeeper) version src; - src = zookeeper.src; - patches = [ - # see: https://issues.apache.org/jira/browse/ZOOKEEPER-1929 - ./zookeeper-1929.patch - ]; - - setSourceRoot = "export sourceRoot=${zookeeper.name}/src/contrib/zkfuse"; + sourceRoot = "${zookeeper.name}/src/contrib/zkfuse"; buildInputs = [ autoreconfHook zookeeper_mt log4cxx boost fuse ]; diff --git a/pkgs/tools/filesystems/zkfuse/zookeeper-1929.patch b/pkgs/tools/filesystems/zkfuse/zookeeper-1929.patch deleted file mode 100644 index e99dbdf33e0..00000000000 --- a/pkgs/tools/filesystems/zkfuse/zookeeper-1929.patch +++ /dev/null @@ -1,15 +0,0 @@ -diff --git a/src/contrib/zkfuse/src/zkadapter.cc b/src/contrib/zkfuse/src/zkadapter.cc -index 886051d..93dbef5 100644 ---- a/src/zkadapter.cc -+++ b/src/zkadapter.cc -@@ -845,7 +845,10 @@ ZooKeeperAdapter::getNodeData(const string &path, - string("Unable to get data of node ") + path, rc - ); - } else { -- return string( buffer, buffer + len ); -+ if (len == -1) { -+ len = 0; -+ }; -+ return string( buffer, len ); - } - } From aadc5abb6ec34265bd52f4f80b17de789fd5570b Mon Sep 17 00:00:00 2001 From: Lancelot SIX Date: Mon, 27 Feb 2017 12:41:51 +0100 Subject: [PATCH 144/216] httpie: 0.9.8 -> 0.9.9 --- pkgs/tools/networking/httpie/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/tools/networking/httpie/default.nix b/pkgs/tools/networking/httpie/default.nix index fe30fd94967..09200f40c93 100644 --- a/pkgs/tools/networking/httpie/default.nix +++ b/pkgs/tools/networking/httpie/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pythonPackages }: pythonPackages.buildPythonApplication rec { - name = "httpie-0.9.8"; + name = "httpie-0.9.9"; namePrefix = ""; src = fetchurl { url = "mirror://pypi/h/httpie/${name}.tar.gz"; - sha256 = "1qgn1mpkk8wxxhvgxw3fnscqg3klh42ijr11zrb0ylriaaqp0n2i"; + sha256 = "1jsgfkyzzizgfy1b0aicb4cp34d5pwskz9c4a8kf4rq3lrpjw87i"; }; propagatedBuildInputs = with pythonPackages; [ pygments requests2 ]; From 56e624b155fd3eb7116af140b844aecfdda24f57 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 12:43:58 +0100 Subject: [PATCH 145/216] xorg.xf86videoxgi: fix build with upstream patch --- pkgs/servers/x11/xorg/overrides.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/servers/x11/xorg/overrides.nix b/pkgs/servers/x11/xorg/overrides.nix index 0afbb21ea22..310bebd382a 100644 --- a/pkgs/servers/x11/xorg/overrides.nix +++ b/pkgs/servers/x11/xorg/overrides.nix @@ -568,6 +568,10 @@ in url = "https://cgit.freedesktop.org/xorg/driver/xf86-video-xgi/patch/?id=bd94c475035739b42294477cff108e0c5f15ef67"; sha256 = "0myfry07655adhrpypa9rqigd6rfx57pqagcwibxw7ab3wjay9f6"; }) + (args.fetchpatch { + url = "https://cgit.freedesktop.org/xorg/driver/xf86-video-xgi/patch/?id=78d1138dd6e214a200ca66fa9e439ee3c9270ec8"; + sha256 = "0z3643afgrync280zrp531ija0hqxc5mrwjif9nh9lcnzgnz2d6d"; + }) ]; }; From 20372739d246f03565781c47fe5013dc9014adbc Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 12:51:26 +0100 Subject: [PATCH 146/216] xfce4_windowck_plugin: fix build --- pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin.nix | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin.nix b/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin.nix index 523283b453a..37ad643930a 100644 --- a/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin.nix +++ b/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin.nix @@ -16,7 +16,10 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig intltool python3 imagemagick libwnck gtk2 exo libxfce4ui libxfce4util xfce4panel xfconf xfce4_dev_tools ]; - preConfigure = "./autogen.sh"; + preConfigure = '' + ./autogen.sh + patchShebangs . + ''; enableParallelBuilding = true; From fdd9d7fe4c184a94de50b9ecfee74be0295f4a1b Mon Sep 17 00:00:00 2001 From: Joe Hermaszewski Date: Mon, 27 Feb 2017 11:47:00 +0000 Subject: [PATCH 147/216] haskell-packages: Add minimal benchDepends support See also: https://github.com/NixOS/cabal2nix/pull/262 --- pkgs/development/haskell-modules/generic-builder.nix | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/pkgs/development/haskell-modules/generic-builder.nix b/pkgs/development/haskell-modules/generic-builder.nix index 1998b090687..a75392bef74 100644 --- a/pkgs/development/haskell-modules/generic-builder.nix +++ b/pkgs/development/haskell-modules/generic-builder.nix @@ -13,6 +13,7 @@ , configureFlags ? [] , description ? "" , doCheck ? !isCross && (stdenv.lib.versionOlder "7.4" ghc.version) +, doBench ? false , doHoogle ? true , editedCabalFile ? null , enableLibraryProfiling ? false @@ -38,6 +39,7 @@ , passthru ? {} , pkgconfigDepends ? [], libraryPkgconfigDepends ? [], executablePkgconfigDepends ? [], testPkgconfigDepends ? [] , testDepends ? [], testHaskellDepends ? [], testSystemDepends ? [] +, benchDepends ? [] , testTarget ? "" , broken ? false , preCompileBuildDriver ? "", postCompileBuildDriver ? "" @@ -145,7 +147,8 @@ let otherBuildInputs = extraLibraries ++ librarySystemDepends ++ executableSystemDepends ++ setupHaskellDepends ++ buildTools ++ libraryToolDepends ++ executableToolDepends ++ optionals (allPkgconfigDepends != []) ([pkgconfig] ++ allPkgconfigDepends) ++ - optionals doCheck (testDepends ++ testHaskellDepends ++ testSystemDepends ++ testToolDepends); + optionals doCheck (testDepends ++ testHaskellDepends ++ testSystemDepends ++ testToolDepends) ++ + optionals doBench benchDepends; allBuildInputs = propagatedBuildInputs ++ otherBuildInputs; haskellBuildInputs = stdenv.lib.filter isHaskellPkg allBuildInputs; @@ -341,6 +344,7 @@ stdenv.mkDerivation ({ // optionalAttrs (preBuild != "") { inherit preBuild; } // optionalAttrs (postBuild != "") { inherit postBuild; } // optionalAttrs (doCheck) { inherit doCheck; } +// optionalAttrs (doBench) { inherit doBench; } // optionalAttrs (checkPhase != "") { inherit checkPhase; } // optionalAttrs (preCheck != "") { inherit preCheck; } // optionalAttrs (postCheck != "") { inherit postCheck; } From 4ab570a6d0be024a89febe6834e6a02061b3ce27 Mon Sep 17 00:00:00 2001 From: Joe Hermaszewski Date: Mon, 27 Feb 2017 11:47:00 +0000 Subject: [PATCH 148/216] haskell-packages: Add minimal benchDepends support See also: https://github.com/NixOS/cabal2nix/pull/262 --- pkgs/development/haskell-modules/generic-builder.nix | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/pkgs/development/haskell-modules/generic-builder.nix b/pkgs/development/haskell-modules/generic-builder.nix index a75392bef74..a22d2c67dfd 100644 --- a/pkgs/development/haskell-modules/generic-builder.nix +++ b/pkgs/development/haskell-modules/generic-builder.nix @@ -9,7 +9,7 @@ , src ? fetchurl { url = "mirror://hackage/${pname}-${version}.tar.gz"; inherit sha256; } , buildDepends ? [], setupHaskellDepends ? [], libraryHaskellDepends ? [], executableHaskellDepends ? [] , buildTarget ? "" -, buildTools ? [], libraryToolDepends ? [], executableToolDepends ? [], testToolDepends ? [] +, buildTools ? [], libraryToolDepends ? [], executableToolDepends ? [], testToolDepends ? [], benchToolDepends ? [] , configureFlags ? [] , description ? "" , doCheck ? !isCross && (stdenv.lib.versionOlder "7.4" ghc.version) @@ -37,9 +37,9 @@ # TODO Do we care about haddock when cross-compiling? , doHaddock ? !isCross && (!stdenv.isDarwin || stdenv.lib.versionAtLeast ghc.version "7.8") , passthru ? {} -, pkgconfigDepends ? [], libraryPkgconfigDepends ? [], executablePkgconfigDepends ? [], testPkgconfigDepends ? [] +, pkgconfigDepends ? [], libraryPkgconfigDepends ? [], executablePkgconfigDepends ? [], testPkgconfigDepends ? [], benchPkgconfigDepends ? [] , testDepends ? [], testHaskellDepends ? [], testSystemDepends ? [] -, benchDepends ? [] +, benchDepends ? [], benchHaskellDepends ? [], benchSystemDepends ? [] , testTarget ? "" , broken ? false , preCompileBuildDriver ? "", postCompileBuildDriver ? "" @@ -141,14 +141,14 @@ let isSystemPkg = x: !isHaskellPkg x; allPkgconfigDepends = pkgconfigDepends ++ libraryPkgconfigDepends ++ executablePkgconfigDepends ++ - optionals doCheck testPkgconfigDepends; + optionals doCheck testPkgconfigDepends ++ optionals doBench benchPkgconfigDepends; propagatedBuildInputs = buildDepends ++ libraryHaskellDepends ++ executableHaskellDepends; otherBuildInputs = extraLibraries ++ librarySystemDepends ++ executableSystemDepends ++ setupHaskellDepends ++ buildTools ++ libraryToolDepends ++ executableToolDepends ++ optionals (allPkgconfigDepends != []) ([pkgconfig] ++ allPkgconfigDepends) ++ optionals doCheck (testDepends ++ testHaskellDepends ++ testSystemDepends ++ testToolDepends) ++ - optionals doBench benchDepends; + optionals doBench (benchDepends ++ benchHaskellDepends ++ benchSystemDepends ++ benchToolDepends); allBuildInputs = propagatedBuildInputs ++ otherBuildInputs; haskellBuildInputs = stdenv.lib.filter isHaskellPkg allBuildInputs; From 8d95889fe67777859b1af1579e0a26a32c28a7df Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 13:16:33 +0100 Subject: [PATCH 149/216] xf86_input_multitouch: fix build --- pkgs/os-specific/linux/xf86-input-multitouch/default.nix | 7 ++++++- pkgs/top-level/all-packages.nix | 3 +-- 2 files changed, 7 insertions(+), 3 deletions(-) diff --git a/pkgs/os-specific/linux/xf86-input-multitouch/default.nix b/pkgs/os-specific/linux/xf86-input-multitouch/default.nix index 80ff9922845..e1bafa93ea6 100644 --- a/pkgs/os-specific/linux/xf86-input-multitouch/default.nix +++ b/pkgs/os-specific/linux/xf86-input-multitouch/default.nix @@ -7,6 +7,7 @@ , xextproto , inputproto , randrproto +, xorg , libpciaccess }: @@ -30,7 +31,11 @@ stdenv.mkDerivation { EndSection ''; - buildInputs = [ mtdev xproto xextproto inputproto libpciaccess randrproto ]; + buildInputs = with xorg; [ + mtdev xproto xextproto inputproto libpciaccess randrproto renderproto + xineramaproto resourceproto scrnsaverproto kbproto libxcb videoproto + dri3proto presentproto + ]; buildPhase = '' make INCLUDE="$NIX_CFLAGS_COMPILE -I${xorgserver.dev}/include/xorg -I${pixman}/include/pixman-1 -Iinclude" diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 61949c9b4d9..c7d9be8a185 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -12065,8 +12065,7 @@ with pkgs; xf86_input_mtrack = callPackage ../os-specific/linux/xf86-input-mtrack { }; - xf86_input_multitouch = - callPackage ../os-specific/linux/xf86-input-multitouch { }; + xf86_input_multitouch = callPackage ../os-specific/linux/xf86-input-multitouch { }; xf86_input_wacom = callPackage ../os-specific/linux/xf86-input-wacom { }; From e001b729e1db5c3dcb683ca725c757dcbb6e2aa0 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 13:34:16 +0100 Subject: [PATCH 150/216] wv2: fix build --- pkgs/tools/misc/wv2/default.nix | 2 ++ 1 file changed, 2 insertions(+) diff --git a/pkgs/tools/misc/wv2/default.nix b/pkgs/tools/misc/wv2/default.nix index 1c2c94ff89c..f39eaf0b047 100644 --- a/pkgs/tools/misc/wv2/default.nix +++ b/pkgs/tools/misc/wv2/default.nix @@ -11,6 +11,8 @@ stdenv.mkDerivation rec { buildInputs = [ pkgconfig cmake libgsf glib libxml2 ]; + NIX_CFLAGS_COMPILE = "-I${libxml2.dev}/include/libxml2"; + meta = { description = "Excellent MS Word filter lib, used in most Office suites"; license = stdenv.lib.licenses.lgpl2; From bbefb5d06a087e495104b1c385ba06b69c3f5504 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 13:39:11 +0100 Subject: [PATCH 151/216] warmux: fix build --- pkgs/games/warmux/gcc-fix.patch | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pkgs/games/warmux/gcc-fix.patch b/pkgs/games/warmux/gcc-fix.patch index 913b912af7d..6b683aa782f 100644 --- a/pkgs/games/warmux/gcc-fix.patch +++ b/pkgs/games/warmux/gcc-fix.patch @@ -45,7 +45,7 @@ Author: Robin Gloster { if (!show) - return false; -+ return nullptr; ++ return NULL; const std::vector& items = poly->GetItem(); WeaponMenuItem * tmp; Interface::GetInstance()->SetCurrentOverflyWeapon(NULL); From 7ed28a0b78f07eff2dba32bbc84ee4de9870f4e1 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Domen=20Ko=C5=BEar?= Date: Mon, 27 Feb 2017 13:51:55 +0100 Subject: [PATCH 152/216] R: fix bio3d build --- pkgs/development/r-modules/default.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 49273e34c7e..ec01d65bf37 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -242,6 +242,7 @@ let BayesVarSel = [ pkgs.gsl_1 ]; BayesXsrc = [ pkgs.readline.dev pkgs.ncurses ]; bigGP = [ pkgs.openmpi ]; + bio3d = [ pkgs.zlib ]; BiocCheck = [ pkgs.which ]; Biostrings = [ pkgs.zlib ]; bnpmr = [ pkgs.gsl_1 ]; From 0c2f96a81f848b28fd343e2fe9e0e7cb397cbbc8 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:29:58 -0500 Subject: [PATCH 153/216] appstream-glib: propagate gtk3 --- pkgs/development/libraries/appstream-glib/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/libraries/appstream-glib/default.nix b/pkgs/development/libraries/appstream-glib/default.nix index caaa826ae67..03853192531 100644 --- a/pkgs/development/libraries/appstream-glib/default.nix +++ b/pkgs/development/libraries/appstream-glib/default.nix @@ -17,8 +17,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoconf automake libtool pkgconfig intltool autoconf-archive ]; buildInputs = [ glib gtk_doc gettext sqlite libsoup gcab attr acl docbook_xsl libuuid json_glib - libarchive libyaml gtk3 gobjectIntrospection ]; - + libarchive libyaml gobjectIntrospection ]; + propagatedBuildInputs = [ gtk3 ]; configureScript = "./autogen.sh"; meta = with stdenv.lib; { From fa84ad2593cde6494a8212078bd971237e5981a5 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:30:20 -0500 Subject: [PATCH 154/216] gusb: 0.2.4 -> 0.2.9 --- pkgs/development/libraries/gusb/default.nix | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/pkgs/development/libraries/gusb/default.nix b/pkgs/development/libraries/gusb/default.nix index ac0425b54ad..5116e39562c 100644 --- a/pkgs/development/libraries/gusb/default.nix +++ b/pkgs/development/libraries/gusb/default.nix @@ -4,22 +4,23 @@ }: stdenv.mkDerivation rec { name = "gusb-${version}"; - version = "0.2.4"; + version = "0.2.9"; enableParallelBuilding = true; src = fetchurl { url = "http://people.freedesktop.org/~hughsient/releases/libgusb-${version}.tar.xz"; - sha256 = "10w0sdq7505iwd8y305aylmx4zafbnphs81cgdsqw2z38pxncya3"; + sha256 = "056yxlppgycsfw1l8c9j6givk1n15jylhvx89wqhsxdi1b6vs83k"; }; preConfigure = "./autogen.sh"; buildInputs = [ pkgconfig autoconf automake libtool which gtkdoc gettext gobjectIntrospection libxslt - systemd libusb1 vala_0_23 - glib + systemd vala_0_23 glib ]; + propagatedBuildInputs = [ libusb1 ]; + meta = { description = "GLib libusb wrapper"; homepage = http://people.freedesktop.org/~hughsient/releases/; From 72ff466de351b1689fcb140f9d5251439144d394 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:30:46 -0500 Subject: [PATCH 155/216] libsmbios: 2.2.28 -> 2.3.2 --- pkgs/os-specific/linux/libsmbios/default.nix | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/pkgs/os-specific/linux/libsmbios/default.nix b/pkgs/os-specific/linux/libsmbios/default.nix index a3d212dda53..e2b675fb4ff 100644 --- a/pkgs/os-specific/linux/libsmbios/default.nix +++ b/pkgs/os-specific/linux/libsmbios/default.nix @@ -1,24 +1,24 @@ -{ stdenv, fetchurl, pkgconfig, libxml2, perl }: +{ stdenv, fetchurl, pkgconfig, libxml2, perl, autoreconfHook, doxygen }: let - name = "libsmbios-2.2.28"; + version = "2.3.2"; in stdenv.mkDerivation { - inherit name; + name = "libsmbios-${version}"; src = fetchurl { - url = "http://linux.dell.com/libsmbios/download/libsmbios/${name}/${name}.tar.gz"; - sha256 = "03m0n834w49acwbf5cf9ync1ksnn2jkwaysvy7584y60qpmngb91"; + url = "https://github.com/dell/libsmbios/archive/v${version}.tar.gz"; + sha256 = "0kvi36jrvhspyyq0pjfdyvzvimdn27fvbdpf429qm3xdmfi78y2j"; }; - buildInputs = [ pkgconfig libxml2 perl ]; + buildInputs = [ pkgconfig libxml2 perl autoreconfHook doxygen ]; # It tries to install some Python stuff even when Python is disabled. installFlags = "pkgpythondir=$(TMPDIR)/python"; - # It forgets to install headers. postInstall = '' + mkdir -p $out/include cp -va "src/include/"* "$out/include/" cp -va "out/public-include/"* "$out/include/" ''; From 40e136542ecce03ce23ae1c8c35fa69ff075922d Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:35:08 -0500 Subject: [PATCH 156/216] fwupdate: init at 8 --- .../linux/firmware/fwupdate/default.nix | 35 +++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 ++ 2 files changed, 37 insertions(+) create mode 100644 pkgs/os-specific/linux/firmware/fwupdate/default.nix diff --git a/pkgs/os-specific/linux/firmware/fwupdate/default.nix b/pkgs/os-specific/linux/firmware/fwupdate/default.nix new file mode 100644 index 00000000000..3fc7af91636 --- /dev/null +++ b/pkgs/os-specific/linux/firmware/fwupdate/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchurl, gnu-efi, efivar, libsmbios, popt, pkgconfig +, gettext }: +let version = "8"; in + stdenv.mkDerivation + { name = "fwupdate-${version}"; + src = fetchurl + { url = "https://github.com/rhinstaller/fwupdate/releases/download/${version}/fwupdate-${version}.tar.bz2"; + sha256 = "10q8k1kghvbcb5fwcl2smzp8vqdfzimx9dkk0c3hz39py1phy4n8"; + }; + makeFlags = + [ "EFIDIR=nixos" + "LIBDIR=$(out)/lib" + "GNUEFIDIR=${gnu-efi}/lib" + "TARGETDIR=$(out)/boot/efi/nixos/" + "prefix=$(out)/" + ]; + buildInputs = [ gnu-efi libsmbios popt pkgconfig gettext ]; + propagatedBuildInputs = [ efivar ]; + # TODO: Just apply the disable to the efi subdir + hardeningDisable = "all"; + patchPhase = '' + sed -i 's|/usr/include/smbios_c/token.h|smbios_c/token.h|' \ + linux/libfwup.c + sed -i 's|/usr/share|$(prefix)share|' linux/Makefile + sed -i "s|/usr/include|$out/include|" linux/fwup.pc.in + ''; + configurePhase = '' + arch=$(cc -dumpmachine | cut -f1 -d- | sed 's,i[3456789]86,ia32,' ) + export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${gnu-efi}/include/efi -I${efivar}/include/efivar -I${gnu-efi}/include/efi/$arch" + ''; + meta = + { license = [ stdenv.lib.licenses.gpl2 ]; + platforms = stdenv.lib.platforms.linux; + }; + } diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index c7d9be8a185..d625c0cb3f7 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -11089,6 +11089,8 @@ with pkgs; dstat = callPackage ../os-specific/linux/dstat { }; + fwupdate = callPackage ../os-specific/linux/firmware/fwupdate { }; + libossp_uuid = callPackage ../development/libraries/libossp-uuid { }; libuuid = From 8307307e4e96c7947efdb1b337071df30ac7bfe6 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:38:49 -0500 Subject: [PATCH 157/216] fwupd: Init at 0.8.0 --- .../linux/firmware/fwupd/default.nix | 36 +++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 ++ 2 files changed, 38 insertions(+) create mode 100644 pkgs/os-specific/linux/firmware/fwupd/default.nix diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix new file mode 100644 index 00000000000..610d12b551d --- /dev/null +++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix @@ -0,0 +1,36 @@ +{ stdenv, fetchurl, gtk_doc, pkgconfig, gobjectIntrospection, intltool +, libgudev, polkit, gcab, appstream-glib, gusb, sqlite, libarchive +, libsoup, docbook2x, gpgme, libxslt, libelf, libsmbios, efivar +, fwupdate, libgpgerror, libyaml +}: +let version = "0.8.0"; in + stdenv.mkDerivation + { name = "fwupd-${version}"; + src = fetchurl + { url = "https://people.freedesktop.org/~hughsient/releases/fwupd-${version}.tar.xz"; + sha256 = "1irr7xr0slfpm7pvlc9ysy85d51fv0gss6cv0w4sc5p7rhvjx69g"; + }; + buildInputs = + [ gtk_doc pkgconfig gobjectIntrospection intltool libgudev + polkit gcab appstream-glib gusb sqlite libarchive libsoup + docbook2x libxslt libelf libsmbios fwupdate libyaml + ]; + patchPhase = '' + sed -i -e \ + 's|/usr/bin/gpgme-config|${gpgme.dev}/bin/gpgme-config|' -e \ + 's|/usr/bin/gpg-error-config|${libgpgerror.dev}/bin/gpg-error-config|' \ + ./configure + ''; + preConfigure = '' + export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${efivar}/include/efivar" + ''; + configureFlags = + [ "--with-systemdunitdir=$out/lib/systemd/system" + "--with-udevrulesdir=$out/lib/udev/rules.d" + ]; + enableParallelBuilding = true; + meta = + { license = [ stdenv.lib.licenses.gpl2 ]; + platforms = stdenv.lib.platforms.linux; + }; + } diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index d625c0cb3f7..73d418355ff 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -11089,6 +11089,8 @@ with pkgs; dstat = callPackage ../os-specific/linux/dstat { }; + fwupd = callPackage ../os-specific/linux/firmware/fwupd { inherit (gnome2) gtk_doc; }; + fwupdate = callPackage ../os-specific/linux/firmware/fwupdate { }; libossp_uuid = callPackage ../development/libraries/libossp-uuid { }; From 1230330b141fef3ab37b2c15507f4e277ff9872f Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 08:45:14 -0500 Subject: [PATCH 158/216] fwupd: Fix systemd/udev install --- pkgs/os-specific/linux/firmware/fwupd/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix index 610d12b551d..36002d7f37d 100644 --- a/pkgs/os-specific/linux/firmware/fwupd/default.nix +++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix @@ -25,8 +25,8 @@ let version = "0.8.0"; in export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${efivar}/include/efivar" ''; configureFlags = - [ "--with-systemdunitdir=$out/lib/systemd/system" - "--with-udevrulesdir=$out/lib/udev/rules.d" + [ "--with-systemdunitdir=$(out)/lib/systemd/system" + "--with-udevrulesdir=$(out)/lib/udev/rules.d" ]; enableParallelBuilding = true; meta = From 65a2e307f0fb19874ae591c72195b7b301464848 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 14:38:57 +0100 Subject: [PATCH 159/216] varnish: fix i686 build --- pkgs/servers/varnish/default.nix | 3 +++ 1 file changed, 3 insertions(+) diff --git a/pkgs/servers/varnish/default.nix b/pkgs/servers/varnish/default.nix index fc5a744ad46..e1376a6c59f 100644 --- a/pkgs/servers/varnish/default.nix +++ b/pkgs/servers/varnish/default.nix @@ -18,6 +18,9 @@ stdenv.mkDerivation rec { buildFlags = "localstatedir=/var/spool"; + # https://github.com/varnishcache/varnish-cache/issues/1875 + NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isi686 "-fexcess-precision=standard"; + outputs = [ "out" "dev" "man" ]; meta = with stdenv.lib; { From 4df663a9a2ad2e38b6db9966461dffbeae6a5888 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 15:00:25 +0100 Subject: [PATCH 160/216] verilator: 3.884 -> 3.900 --- .../science/electronics/verilator/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/applications/science/electronics/verilator/default.nix b/pkgs/applications/science/electronics/verilator/default.nix index 5c1cd75fd56..3c01f8f3749 100644 --- a/pkgs/applications/science/electronics/verilator/default.nix +++ b/pkgs/applications/science/electronics/verilator/default.nix @@ -1,16 +1,16 @@ -{ stdenv, fetchurl, perl, flex, bison }: +{ stdenv, fetchurl, perl, flex_2_6_1, bison }: stdenv.mkDerivation rec { name = "verilator-${version}"; - version = "3.884"; + version = "3.900"; src = fetchurl { url = "http://www.veripool.org/ftp/${name}.tgz"; - sha256 = "1j159dg7m2ych5lwglb1qq1fgqh3kwhaa1r3jx84qdisg0icln2y"; + sha256 = "0yvbibcysdiw6mphda0lfs56wz6v450px2420x0hbd3rc7k53s2b"; }; enableParallelBuilding = true; - buildInputs = [ perl flex bison ]; + buildInputs = [ perl flex_2_6_1 bison ]; meta = { description = "Fast and robust (System)Verilog simulator/compiler"; From b55c259a7208e691050f341d8296ee044606a858 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 15:04:40 +0100 Subject: [PATCH 161/216] vfdecrypt: fix build --- pkgs/tools/misc/vfdecrypt/default.nix | 19 ++++++++++++++----- 1 file changed, 14 insertions(+), 5 deletions(-) diff --git a/pkgs/tools/misc/vfdecrypt/default.nix b/pkgs/tools/misc/vfdecrypt/default.nix index 552fa0c763d..83b91f6203e 100644 --- a/pkgs/tools/misc/vfdecrypt/default.nix +++ b/pkgs/tools/misc/vfdecrypt/default.nix @@ -1,17 +1,26 @@ -{ stdenv, fetchgit, openssl }: +{ stdenv, fetchFromGitHub, openssl }: stdenv.mkDerivation rec { - name = "vfdecrypt"; + name = "vfdecrypt-${version}"; + version = "unstable-2010-08-13"; - src = fetchgit { - url = git://github.com/drakealleg/VFDecrypt.git; + src = fetchFromGitHub { + owner = "Tomer1510"; + repo = "VFDecrypt"; rev = "4e2fa32816254907e82886b936afcae9859a876c"; sha256 = "0b945805f7f60bf48556c2db45c9ab26485fb05acbc6160a563d529b20cb56a3"; }; + buildInputs = [ openssl ]; - broken = true; # No such repo + installPhase = '' mkdir -p $out/bin cp vfdecrypt $out/bin ''; + + meta = with stdenv.lib; { + description = "A cross platform dmg decryption tool"; + license = licenses.mit; + inherit (src.meta) homepage; + }; } From a20a53300d9741d0c8dedfb994b358b0896c55d3 Mon Sep 17 00:00:00 2001 From: Joachim Fasting Date: Mon, 27 Feb 2017 16:02:33 +0100 Subject: [PATCH 162/216] grsecurity: 4.9.13-201702261126 -> 201702270729 --- pkgs/os-specific/linux/kernel/patches.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index a61a6c9e18a..1f5c07f9b09 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -96,8 +96,8 @@ rec { grsecurity_testing = grsecPatch { kver = "4.9.13"; - grrev = "201702261126"; - sha512 = "18snigndkyw372mp65v3sp9cpz8w4n3d3lzls50a3gl1qgnpp65g0vbf7vsm3spr9a5p5f17n7hl7lxgm0pqnjcgg0xr5ghkwx20z6b"; + grrev = "201702270729"; + sha512 = "07sbgvksjrvawisq4knjq34022blgg8f14blv22d37siplyamydarsykai5dks5573k61dv9q027jigxyamy50h0fd5ic8qpdp0y30c"; }; # This patch relaxes grsec constraints on the location of usermode helpers, From 2edb8ffa14e04e77ee5041cccd82e0b083353572 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 10:07:57 -0500 Subject: [PATCH 163/216] fwupd: 0.8.0 -> 0.8.1. --- pkgs/os-specific/linux/firmware/fwupd/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix index 36002d7f37d..4c88e9c6807 100644 --- a/pkgs/os-specific/linux/firmware/fwupd/default.nix +++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix @@ -1,19 +1,19 @@ { stdenv, fetchurl, gtk_doc, pkgconfig, gobjectIntrospection, intltool , libgudev, polkit, gcab, appstream-glib, gusb, sqlite, libarchive , libsoup, docbook2x, gpgme, libxslt, libelf, libsmbios, efivar -, fwupdate, libgpgerror, libyaml +, fwupdate, libgpgerror, libyaml, valgrind }: -let version = "0.8.0"; in +let version = "0.8.1"; in stdenv.mkDerivation { name = "fwupd-${version}"; src = fetchurl { url = "https://people.freedesktop.org/~hughsient/releases/fwupd-${version}.tar.xz"; - sha256 = "1irr7xr0slfpm7pvlc9ysy85d51fv0gss6cv0w4sc5p7rhvjx69g"; + sha256 = "0sq0aay5d6b0vgr7j7y4i58flbxmcbpwyw6vfwrd29fim21j6ac8"; }; buildInputs = [ gtk_doc pkgconfig gobjectIntrospection intltool libgudev polkit gcab appstream-glib gusb sqlite libarchive libsoup - docbook2x libxslt libelf libsmbios fwupdate libyaml + docbook2x libxslt libelf libsmbios fwupdate libyaml valgrind ]; patchPhase = '' sed -i -e \ From bccac381b27592bdc22d151c744814716eb4f7ec Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Mon, 27 Feb 2017 17:12:33 +0100 Subject: [PATCH 164/216] microcode updates: prepend first in initrd Prevents crashing the kernel on boot if other blobs are prepended before the microkernel update image. Fixes #22674. --- nixos/modules/hardware/cpu/amd-microcode.nix | 3 ++- nixos/modules/hardware/cpu/intel-microcode.nix | 3 ++- 2 files changed, 4 insertions(+), 2 deletions(-) diff --git a/nixos/modules/hardware/cpu/amd-microcode.nix b/nixos/modules/hardware/cpu/amd-microcode.nix index d44f01a4959..621c7066bfe 100644 --- a/nixos/modules/hardware/cpu/amd-microcode.nix +++ b/nixos/modules/hardware/cpu/amd-microcode.nix @@ -22,7 +22,8 @@ with lib; ###### implementation config = mkIf config.hardware.cpu.amd.updateMicrocode { - boot.initrd.prepend = [ "${pkgs.microcodeAmd}/amd-ucode.img" ]; + # Microcode updates must be the first item prepended in the initrd + boot.initrd.prepend = mkOrder 1 [ "${pkgs.microcodeAmd}/amd-ucode.img" ]; }; } diff --git a/nixos/modules/hardware/cpu/intel-microcode.nix b/nixos/modules/hardware/cpu/intel-microcode.nix index 89ae4f45806..acce565fd80 100644 --- a/nixos/modules/hardware/cpu/intel-microcode.nix +++ b/nixos/modules/hardware/cpu/intel-microcode.nix @@ -22,7 +22,8 @@ with lib; ###### implementation config = mkIf config.hardware.cpu.intel.updateMicrocode { - boot.initrd.prepend = [ "${pkgs.microcodeIntel}/intel-ucode.img" ]; + # Microcode updates must be the first item prepended in the initrd + boot.initrd.prepend = mkOrder 1 [ "${pkgs.microcodeIntel}/intel-ucode.img" ]; }; } From 6018cf4a692b5e12e433cc332f8d8f79ccd57ba1 Mon Sep 17 00:00:00 2001 From: Dan Peebles Date: Mon, 27 Feb 2017 16:51:36 +0000 Subject: [PATCH 165/216] amazon-init.service: fix starting services at startup We now make it happen later in the boot process so that multi-user has already activated, so as to not run afoul of the logic in switch-to-configuration.pl. It's not my favorite solution, but at least it works. Also added a check to the VM test to catch the failure so we don't break in future. Fixes #23121 --- nixos/modules/virtualisation/amazon-init.nix | 5 ++--- nixos/tests/ec2.nix | 21 ++++++++++++++++++-- 2 files changed, 21 insertions(+), 5 deletions(-) diff --git a/nixos/modules/virtualisation/amazon-init.nix b/nixos/modules/virtualisation/amazon-init.nix index 5797d9db436..a7362423eb4 100644 --- a/nixos/modules/virtualisation/amazon-init.nix +++ b/nixos/modules/virtualisation/amazon-init.nix @@ -45,9 +45,8 @@ in { inherit script; description = "Reconfigure the system from EC2 userdata on startup"; - wantedBy = [ "sshd.service" ]; - before = [ "sshd.service" ]; - after = [ "network-online.target" ]; + wantedBy = [ "multi-user.target" ]; + after = [ "multi-user.target" ]; requires = [ "network-online.target" ]; restartIfChanged = false; diff --git a/nixos/tests/ec2.nix b/nixos/tests/ec2.nix index e1f7143e3a9..4ec7e56cc6c 100644 --- a/nixos/tests/ec2.nix +++ b/nixos/tests/ec2.nix @@ -25,8 +25,13 @@ let # access. Mostly copied from # modules/profiles/installation-device.nix. system.extraDependencies = - [ pkgs.stdenv pkgs.busybox pkgs.perlPackages.ArchiveCpio - pkgs.unionfs-fuse pkgs.mkinitcpio-nfs-utils + with pkgs; [ + stdenv busybox perlPackages.ArchiveCpio unionfs-fuse mkinitcpio-nfs-utils + + # These are used in the configure-from-userdata tests for EC2. Httpd and valgrind are requested + # directly by the configuration we set, and libxslt.bin is used indirectly as a build dependency + # of the derivation for dbus configuration files. + apacheHttpd valgrind.doc libxslt.bin ]; } ]; @@ -137,6 +142,8 @@ in { # ### http://nixos.org/channels/nixos-unstable nixos userData = '' + { pkgs, ... }: + { imports = [ @@ -146,12 +153,22 @@ in { environment.etc.testFile = { text = "whoa"; }; + + services.httpd = { + enable = true; + adminAddr = "test@example.org"; + documentRoot = "${pkgs.valgrind.doc}/share/doc/valgrind/html"; + }; + networking.firewall.allowedTCPPorts = [ 80 ]; } ''; script = '' $machine->start; $machine->waitForFile("/etc/testFile"); $machine->succeed("cat /etc/testFile | grep -q 'whoa'"); + + $machine->waitForUnit("httpd.service"); + $machine->succeed("curl http://localhost | grep Valgrind"); ''; }; } From 4f2e7a0424a51f7462f219fa5691be1d3ae6a082 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 09:44:01 -0600 Subject: [PATCH 166/216] Separate Qt 5 packages from dependent libraries --- pkgs/applications/editors/kile/default.nix | 82 ++++-- pkgs/applications/editors/kile/frameworks.nix | 68 ----- .../libraries/kde-frameworks/default.nix | 5 +- pkgs/development/libraries/phonon/default.nix | 4 +- .../libraries/qt-5/5.5/default.nix | 30 +- .../libraries/qt-5/5.6/default.nix | 29 +- .../libraries/qt-5/5.7/default.nix | 30 +- pkgs/development/libraries/quazip/default.nix | 4 +- pkgs/tools/misc/colord-kde/default.nix | 4 +- pkgs/top-level/aliases.nix | 16 +- pkgs/top-level/all-packages.nix | 277 ++++++++++-------- 11 files changed, 272 insertions(+), 277 deletions(-) delete mode 100644 pkgs/applications/editors/kile/frameworks.nix diff --git a/pkgs/applications/editors/kile/default.nix b/pkgs/applications/editors/kile/default.nix index 7f7b22dfa13..ad3300b9221 100644 --- a/pkgs/applications/editors/kile/default.nix +++ b/pkgs/applications/editors/kile/default.nix @@ -1,28 +1,68 @@ -{ stdenv, fetchurl, automoc4, cmake, gettext, perl, pkgconfig -, shared_mime_info, kdelibs +{ kdeDerivation +, lib +, fetchgit +, ecm +, kdoctools +, kdeWrapper +, qtscript +, kconfig +, kcrash +, kdbusaddons +, kdelibs4support +, kguiaddons +, kiconthemes +, kinit +, khtml +, konsole +, kparts +, ktexteditor +, kwindowsystem +, poppler }: -stdenv.mkDerivation rec { - name = "kile-2.1.3"; +let + unwrapped = + kdeDerivation rec { + name = "kile-${version}"; + version = "2017-02-09"; - src = fetchurl { - url = "mirror://sourceforge/kile/${name}.tar.bz2"; - sha256 = "18nfi37s46v9xav7vyki3phasddgcy4m7nywzxis198vr97yqqx0"; - }; + src = fetchgit { + url = git://anongit.kde.org/kile.git; + rev = "f77f6e627487c152f111e307ad6dc71699ade746"; + sha256 = "0wpqaix9ssa28cm7qqjj0zfrscjgk8s3kmi5b4kk8h583gsrikib"; - nativeBuildInputs = [ - automoc4 cmake gettext perl pkgconfig shared_mime_info - ]; - buildInputs = [ kdelibs ]; + }; - # for KDE 4.7 the nl translations fail since kile-2.1.2 - preConfigure = "rm -r translations/nl"; + nativeBuildInputs = [ ecm kdoctools ]; - meta = { - description = "An integrated LaTeX editor for KDE"; - homepage = http://kile.sourceforge.net; - maintainers = [ stdenv.lib.maintainers.urkud ]; - license = stdenv.lib.licenses.gpl2Plus; - inherit (kdelibs.meta) platforms; - }; + buildInputs = [ + kconfig + kcrash + kdbusaddons + kdelibs4support + kdoctools + kguiaddons + kiconthemes + kinit + khtml + kparts + ktexteditor + kwindowsystem + poppler + qtscript + ]; + + meta = { + description = "Kile is a user friendly TeX/LaTeX authoring tool for the KDE desktop environment"; + homepage = https://www.kde.org/applications/office/kile/; + maintainers = with lib.maintainers; [ fridh ]; + license = lib.licenses.gpl2Plus; + }; + }; +in +kdeWrapper +{ + inherit unwrapped; + targets = [ "bin/kile" ]; + paths = [ konsole.unwrapped ]; } diff --git a/pkgs/applications/editors/kile/frameworks.nix b/pkgs/applications/editors/kile/frameworks.nix deleted file mode 100644 index ad3300b9221..00000000000 --- a/pkgs/applications/editors/kile/frameworks.nix +++ /dev/null @@ -1,68 +0,0 @@ -{ kdeDerivation -, lib -, fetchgit -, ecm -, kdoctools -, kdeWrapper -, qtscript -, kconfig -, kcrash -, kdbusaddons -, kdelibs4support -, kguiaddons -, kiconthemes -, kinit -, khtml -, konsole -, kparts -, ktexteditor -, kwindowsystem -, poppler -}: - -let - unwrapped = - kdeDerivation rec { - name = "kile-${version}"; - version = "2017-02-09"; - - src = fetchgit { - url = git://anongit.kde.org/kile.git; - rev = "f77f6e627487c152f111e307ad6dc71699ade746"; - sha256 = "0wpqaix9ssa28cm7qqjj0zfrscjgk8s3kmi5b4kk8h583gsrikib"; - - }; - - nativeBuildInputs = [ ecm kdoctools ]; - - buildInputs = [ - kconfig - kcrash - kdbusaddons - kdelibs4support - kdoctools - kguiaddons - kiconthemes - kinit - khtml - kparts - ktexteditor - kwindowsystem - poppler - qtscript - ]; - - meta = { - description = "Kile is a user friendly TeX/LaTeX authoring tool for the KDE desktop environment"; - homepage = https://www.kde.org/applications/office/kile/; - maintainers = with lib.maintainers; [ fridh ]; - license = lib.licenses.gpl2Plus; - }; - }; -in -kdeWrapper -{ - inherit unwrapped; - targets = [ "bin/kile" ]; - paths = [ konsole.unwrapped ]; -} diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index ee7614bbcf1..ac6b319a0dd 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -51,9 +51,7 @@ let }); - kdeFramework = let - broken = builtins.compareVersions self.qtbase.version "5.6.0" < 0; - in args: + kdeFramework = args: let inherit (args) name; inherit (srcs."${name}") src version; @@ -67,7 +65,6 @@ let ]; platforms = lib.platforms.linux; homepage = "http://www.kde.org"; - inherit broken; } // (args.meta or {}); }); diff --git a/pkgs/development/libraries/phonon/default.nix b/pkgs/development/libraries/phonon/default.nix index 4bbe05fea6e..31d8b7d7c8e 100644 --- a/pkgs/development/libraries/phonon/default.nix +++ b/pkgs/development/libraries/phonon/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, cmake, mesa, pkgconfig, libpulseaudio -, qt4 ? null, extra-cmake-modules, qtbase ? null, qttools ? null +, qt4 ? null, ecm ? null, qtbase ? null, qttools ? null , withQt5 ? false , debug ? false }: @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { [ mesa libpulseaudio ] ++ (if withQt5 then [ qtbase qttools ] else [ qt4 ]); - nativeBuildInputs = [ cmake pkgconfig ] ++ optional withQt5 extra-cmake-modules; + nativeBuildInputs = [ cmake pkgconfig ] ++ optional withQt5 ecm; NIX_CFLAGS_COMPILE = "-fPIC"; diff --git a/pkgs/development/libraries/qt-5/5.5/default.nix b/pkgs/development/libraries/qt-5/5.5/default.nix index 6d27ed5a0d3..607696dc562 100644 --- a/pkgs/development/libraries/qt-5/5.5/default.nix +++ b/pkgs/development/libraries/qt-5/5.5/default.nix @@ -16,27 +16,30 @@ */ -{ pkgs +{ + newScope, + stdenv, fetchurl, makeSetupHook, makeWrapper, + bison, cups ? null, harfbuzz, mesa, perl, + libgnomeui, GConf, gnome_vfs, + gstreamer, gst-plugins-base, -# options -, developerBuild ? false -, decryptSslTraffic ? false + # options + developerBuild ? false, + decryptSslTraffic ? false, }: -let inherit (pkgs) makeSetupHook makeWrapper stdenv; in - with stdenv.lib; let mirror = "http://download.qt.io"; - srcs = import ./srcs.nix { inherit mirror; inherit (pkgs) fetchurl; }; + srcs = import ./srcs.nix { inherit mirror; inherit fetchurl; }; qtSubmodule = args: let inherit (args) name; inherit (srcs."${args.name}") version src; - inherit (pkgs.stdenv) mkDerivation; + inherit (stdenv) mkDerivation; in mkDerivation (args // { name = "${name}-${version}"; inherit src; @@ -62,12 +65,9 @@ let in { qtbase = callPackage ./qtbase { - mesa = pkgs.mesa_noglu; - harfbuzz = pkgs.harfbuzz-icu; - cups = if stdenv.isLinux then pkgs.cups else null; + inherit bison cups harfbuzz mesa; # GNOME dependencies are not used unless gtkStyle == true - inherit (pkgs.gnome2) libgnomeui GConf gnome_vfs; - bison = pkgs.bison2; # error: too few arguments to function 'int yylex(... + inherit libgnomeui GConf gnome_vfs; inherit developerBuild decryptSslTraffic; }; @@ -84,7 +84,7 @@ let qtlocation = callPackage ./qtlocation.nix {}; /* qtmacextras = not packaged */ qtmultimedia = callPackage ./qtmultimedia.nix { - inherit (pkgs.gst_all_1) gstreamer gst-plugins-base; + inherit gstreamer gst-plugins-base; }; qtquick1 = callPackage ./qtquick1 {}; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; @@ -124,6 +124,6 @@ let }; - self = makeScope pkgs.newScope addPackages; + self = makeScope newScope addPackages; in self diff --git a/pkgs/development/libraries/qt-5/5.6/default.nix b/pkgs/development/libraries/qt-5/5.6/default.nix index 687708d98ef..542bf41d587 100644 --- a/pkgs/development/libraries/qt-5/5.6/default.nix +++ b/pkgs/development/libraries/qt-5/5.6/default.nix @@ -14,28 +14,30 @@ top-level attribute to `top-level/all-packages.nix`. */ -{ pkgs +{ + newScope, + stdenv, fetchurl, makeSetupHook, makeWrapper, + bison, cups ? null, harfbuzz, mesa, perl, + gstreamer, gst-plugins-base, -# options -, developerBuild ? false -, decryptSslTraffic ? false + # options + developerBuild ? false, + decryptSslTraffic ? false, }: -let inherit (pkgs) makeSetupHook makeWrapper stdenv; in - with stdenv.lib; let mirror = "http://download.qt.io"; - srcs = import ./srcs.nix { inherit (pkgs) fetchurl; inherit mirror; }; + srcs = import ./srcs.nix { inherit fetchurl; inherit mirror; }; qtSubmodule = args: let inherit (args) name; version = args.version or srcs."${name}".version; src = args.src or srcs."${name}".src; - inherit (pkgs.stdenv) mkDerivation; + inherit (stdenv) mkDerivation; in mkDerivation (args // { name = "${name}-${version}"; inherit src; @@ -43,7 +45,7 @@ let propagatedBuildInputs = args.qtInputs ++ (args.propagatedBuildInputs or []); nativeBuildInputs = (args.nativeBuildInputs or []) - ++ [ pkgs.perl self.qmakeHook ]; + ++ [ perl self.qmakeHook ]; NIX_QT_SUBMODULE = args.NIX_QT_SUBMODULE or true; @@ -63,10 +65,7 @@ let in { qtbase = callPackage ./qtbase { - mesa = pkgs.mesa_noglu; - harfbuzz = pkgs.harfbuzz-icu; - cups = if stdenv.isLinux then pkgs.cups else null; - bison = pkgs.bison2; # error: too few arguments to function 'int yylex(... + inherit bison cups harfbuzz mesa; inherit developerBuild decryptSslTraffic; }; @@ -83,7 +82,7 @@ let qtlocation = callPackage ./qtlocation.nix {}; /* qtmacextras = not packaged */ qtmultimedia = callPackage ./qtmultimedia.nix { - inherit (pkgs.gst_all_1) gstreamer gst-plugins-base; + inherit gstreamer gst-plugins-base; }; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; qtscript = callPackage ./qtscript {}; @@ -120,6 +119,6 @@ let (if stdenv.isDarwin then ../qmake-hook-darwin.sh else ../qmake-hook.sh); }; - self = makeScope pkgs.newScope addPackages; + self = makeScope newScope addPackages; in self diff --git a/pkgs/development/libraries/qt-5/5.7/default.nix b/pkgs/development/libraries/qt-5/5.7/default.nix index d62bd3d1b51..0fbcdfd9ebd 100644 --- a/pkgs/development/libraries/qt-5/5.7/default.nix +++ b/pkgs/development/libraries/qt-5/5.7/default.nix @@ -14,28 +14,30 @@ top-level attribute to `top-level/all-packages.nix`. */ -{ pkgs +{ + newScope, + stdenv, fetchurl, makeSetupHook, makeWrapper, + bison, cups ? null, harfbuzz, mesa, perl, + gstreamer, gst-plugins-base, -# options -, developerBuild ? false -, decryptSslTraffic ? false + # options + developerBuild ? false, + decryptSslTraffic ? false, }: -let inherit (pkgs) makeSetupHook makeWrapper stdenv; in - with stdenv.lib; let mirror = "http://download.qt.io"; - srcs = import ./srcs.nix { inherit (pkgs) fetchurl; inherit mirror; }; + srcs = import ./srcs.nix { inherit fetchurl; inherit mirror; }; qtSubmodule = args: let inherit (args) name; version = args.version or srcs."${name}".version; src = args.src or srcs."${name}".src; - inherit (pkgs.stdenv) mkDerivation; + inherit (stdenv) mkDerivation; in mkDerivation (args // { name = "${name}-${version}"; inherit src; @@ -43,7 +45,7 @@ let propagatedBuildInputs = args.qtInputs ++ (args.propagatedBuildInputs or []); nativeBuildInputs = (args.nativeBuildInputs or []) - ++ [ pkgs.perl self.qmakeHook ]; + ++ [ perl self.qmakeHook ]; NIX_QT_SUBMODULE = args.NIX_QT_SUBMODULE or true; @@ -64,11 +66,7 @@ let qtbase = callPackage ./qtbase { inherit (srcs.qtbase) src version; - mesa = pkgs.mesa_noglu; - harfbuzz = pkgs.harfbuzz-icu; - cups = if stdenv.isLinux then pkgs.cups else null; - # GNOME dependencies are not used unless gtkStyle == true - bison = pkgs.bison2; # error: too few arguments to function 'int yylex(... + inherit bison cups harfbuzz mesa; inherit developerBuild decryptSslTraffic; }; @@ -79,7 +77,7 @@ let qtimageformats = callPackage ./qtimageformats.nix {}; qtlocation = callPackage ./qtlocation.nix {}; qtmultimedia = callPackage ./qtmultimedia.nix { - inherit (pkgs.gst_all_1) gstreamer gst-plugins-base; + inherit gstreamer gst-plugins-base; }; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; qtquickcontrols2 = callPackage ./qtquickcontrols2.nix {}; @@ -117,6 +115,6 @@ let }; - self = makeScope pkgs.newScope addPackages; + self = makeScope newScope addPackages; in self diff --git a/pkgs/development/libraries/quazip/default.nix b/pkgs/development/libraries/quazip/default.nix index a1eb2ad7084..7fbbf27c8eb 100644 --- a/pkgs/development/libraries/quazip/default.nix +++ b/pkgs/development/libraries/quazip/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, zip, zlib, qt, qmakeHook }: +{ fetchurl, stdenv, zip, zlib, qtbase, qmakeHook }: stdenv.mkDerivation rec { name = "quazip-0.7.1"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { preConfigure = "cd quazip"; - buildInputs = [ zlib qt ]; + buildInputs = [ zlib qtbase ]; nativeBuildInputs = [ qmakeHook ]; meta = { diff --git a/pkgs/tools/misc/colord-kde/default.nix b/pkgs/tools/misc/colord-kde/default.nix index 0c8e9d6bcee..7dc48db104c 100644 --- a/pkgs/tools/misc/colord-kde/default.nix +++ b/pkgs/tools/misc/colord-kde/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl -, extra-cmake-modules, ki18n +, ecm, ki18n , kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kiconthemes, kcmutils , kio, knotifications, plasma-framework, kwidgetsaddons, kwindowsystem , kitemviews, lcms2, libXrandr, qtx11extras @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { sha256 = "0brdnpflm95vf4l41clrqxwvjrdwhs859n7401wxcykkmw4m0m3c"; }; - nativeBuildInputs = [ extra-cmake-modules ki18n ]; + nativeBuildInputs = [ ecm ki18n ]; buildInputs = [ kconfig kconfigwidgets kcoreaddons kdbusaddons kiconthemes diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index eaf6813263a..318415b7512 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -17,7 +17,7 @@ in ### Deprecated aliases - for backward compatibility doNotDisplayTwice rec { - accounts-qt = qt5.accounts-qt; # added 2015-12-19 + accounts-qt = libsForQt5.accounts-qt; # added 2015-12-19 adobeReader = adobe-reader; aircrackng = aircrack-ng; # added 2016-01-14 arduino_core = arduino-core; # added 2015-02-04 @@ -51,7 +51,7 @@ doNotDisplayTwice rec { gettextWithExpat = gettext; # 2016-02-19 git-hub = gitAndTools.git-hub; # added 2016-04-29 googleAuthenticator = google-authenticator; # added 2016-10-16 - grantlee5 = qt5.grantlee; # added 2015-12-19 + grantlee5 = libsForQt5.grantlee; # added 2015-12-19 gst_ffmpeg = gst-ffmpeg; # added 2017-02 gst_plugins_base = gst-plugins-base; # added 2017-02 gst_plugins_good = gst-plugins-good; # added 2017-02 @@ -71,7 +71,7 @@ doNotDisplayTwice rec { keybase-go = keybase; # added 2016-08-24 krename-qt5 = krename; # added 2017-02-18 letsencrypt = certbot; # added 2016-05-16 - libdbusmenu_qt5 = qt5.libdbusmenu; # added 2015-12-19 + libdbusmenu_qt5 = libsForQt5.libdbusmenu; # added 2015-12-19 libcap_manpages = libcap.doc; # added 2016-04-29 libcap_pam = if stdenv.isLinux then libcap.pam else null; # added 2016-04-29 libcap_progs = libcap.out; # added 2016-04-29 @@ -83,7 +83,7 @@ doNotDisplayTwice rec { manpages = man-pages; # added 2015-12-06 man_db = man-db; # added 2016-05 midoriWrapper = midori; # added 2015-01 - mlt-qt5 = qt5.mlt; # added 2015-12-19 + mlt-qt5 = libsForQt5.mlt; # added 2015-12-19 module_init_tools = kmod; # added 2016-04-22 mssys = ms-sys; # added 2015-12-13 multipath_tools = multipath-tools; # added 2016-01-21 @@ -96,13 +96,13 @@ doNotDisplayTwice rec { owncloudclient = owncloud-client; # added 2016-08 pidgin-with-plugins = pidgin; # added 2016-06 pidginlatexSF = pidginlatex; # added 2014-11-02 - poppler_qt5 = qt5.poppler; # added 2015-12-19 - qca-qt5 = qt5.qca-qt5; # added 2015-12-19 + poppler_qt5 = libsForQt5.poppler; # added 2015-12-19 + qca-qt5 = libsForQt5.qca-qt5; # added 2015-12-19 QmidiNet = qmidinet; # added 2016-05-22 qt_gstreamer = qt-gstreamer; # added 2017-02 qt_gstreamer1 = qt-gstreamer1; # added 2017-02 quake3game = ioquake3; # added 2016-01-14 - qwt6 = qt5.qwt; # added 2015-12-19 + qwt6 = libsForQt5.qwt; # added 2015-12-19 rdiff_backup = rdiff-backup; # added 2014-11-23 rssglx = rss-glx; #added 2015-03-25 rubygems = throw "deprecated 2016-03-02: rubygems is now bundled with ruby"; @@ -119,7 +119,7 @@ doNotDisplayTwice rec { sqliteInteractive = sqlite-interactive; # added 2014-12-06 sshfsFuse = sshfs-fuse; # added 2016-09 system_config_printer = system-config-printer; # added 2016-01-03 - telepathy_qt5 = qt5.telepathy; # added 2015-12-19 + telepathy_qt5 = libsForQt5.telepathy; # added 2015-12-19 tftp_hpa = tftp-hpa; # added 2015-04-03 ucsFonts = ucs-fonts; # added 2016-07-15 usb_modeswitch = usb-modeswitch; # added 2016-05-10 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 73d418355ff..7395a60bf8b 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -381,7 +381,7 @@ with pkgs; aj-snapshot = callPackage ../applications/audio/aj-snapshot { }; - albert = qt5.callPackage ../applications/misc/albert {}; + albert = libsForQt5.callPackage ../applications/misc/albert {}; amazon-glacier-cmd-interface = callPackage ../tools/backup/amazon-glacier-cmd-interface { }; @@ -420,7 +420,7 @@ with pkgs; withGui = false; }; - apitrace = qt55.callPackage ../applications/graphics/apitrace {}; + apitrace = libsForQt55.callPackage ../applications/graphics/apitrace {}; argus = callPackage ../tools/networking/argus {}; @@ -746,7 +746,7 @@ with pkgs; clib = callPackage ../tools/package-management/clib { }; - colord-kde = qt5.callPackage ../tools/misc/colord-kde {}; + colord-kde = libsForQt5.callPackage ../tools/misc/colord-kde {}; consul = callPackage ../servers/consul { }; @@ -1094,7 +1094,7 @@ with pkgs; davix = callPackage ../tools/networking/davix { }; - cantata = qt5.callPackage ../applications/audio/cantata { + cantata = libsForQt5.callPackage ../applications/audio/cantata { ffmpeg = ffmpeg_2; }; @@ -1160,7 +1160,7 @@ with pkgs; citrix_receiver = callPackage ../applications/networking/remote/citrix-receiver { }; - cmst = qt5.callPackage ../tools/networking/cmst { }; + cmst = libsForQt5.callPackage ../tools/networking/cmst { }; colord = callPackage ../tools/misc/colord { }; @@ -1291,7 +1291,7 @@ with pkgs; cloud-utils = callPackage ../tools/misc/cloud-utils { }; - ckb = qt5.callPackage ../tools/misc/ckb { }; + ckb = libsForQt5.callPackage ../tools/misc/ckb { }; compass = callPackage ../development/tools/compass { }; @@ -1299,7 +1299,7 @@ with pkgs; convoy = callPackage ../tools/filesystems/convoy { }; - cool-retro-term = qt55.callPackage ../applications/misc/cool-retro-term { }; + cool-retro-term = libsForQt55.callPackage ../applications/misc/cool-retro-term { }; coreutils = callPackage ../tools/misc/coreutils { aclSupport = stdenv.isLinux; @@ -2202,7 +2202,7 @@ with pkgs; hecate = callPackage ../applications/editors/hecate { }; - heaptrack = callPackage ../development/tools/profiling/heaptrack {}; + heaptrack = libsForQt5.callPackage ../development/tools/profiling/heaptrack {}; heimdall = callPackage ../tools/misc/heimdall { }; @@ -2252,11 +2252,11 @@ with pkgs; i2pd = callPackage ../tools/networking/i2pd {}; - i-score = qt5.callPackage ../applications/audio/i-score { }; + i-score = libsForQt5.callPackage ../applications/audio/i-score { }; iasl = callPackage ../development/compilers/iasl { }; - iannix = qt5.callPackage ../applications/audio/iannix { }; + iannix = libsForQt5.callPackage ../applications/audio/iannix { }; icecast = callPackage ../servers/icecast { }; @@ -2455,15 +2455,15 @@ with pkgs; kpcli = callPackage ../tools/security/kpcli { }; - krename = qt5.callPackage ../applications/misc/krename { }; + krename = libsForQt5.callPackage ../applications/misc/krename { }; - kronometer = qt5.callPackage ../tools/misc/kronometer { }; + kronometer = libsForQt5.callPackage ../tools/misc/kronometer { }; - kdiff3 = qt5.callPackage ../tools/text/kdiff3 { }; + kdiff3 = libsForQt5.callPackage ../tools/text/kdiff3 { }; - peruse = qt5.callPackage ../tools/misc/peruse { }; + peruse = libsForQt5.callPackage ../tools/misc/peruse { }; - kst = qt5.callPackage ../tools/graphics/kst { gsl = gsl_1; }; + kst = libsForQt5.callPackage ../tools/graphics/kst { gsl = gsl_1; }; kytea = callPackage ../tools/text/kytea { }; @@ -2862,7 +2862,7 @@ with pkgs; mfoc = callPackage ../tools/security/mfoc { }; - mgba = qt5.callPackage ../misc/emulators/mgba { }; + mgba = libsForQt5.callPackage ../misc/emulators/mgba { }; mimeo = callPackage ../tools/misc/mimeo { }; @@ -3409,7 +3409,7 @@ with pkgs; inherit qt4; }; - pinentry_qt5 = qt5.callPackage ../tools/security/pinentry/qt5.nix { + pinentry_qt5 = libsForQt5.callPackage ../tools/security/pinentry/qt5.nix { libcap = if stdenv.isDarwin then null else libcap; }; @@ -3558,10 +3558,10 @@ with pkgs; qalculate-gtk = callPackage ../applications/science/math/qalculate-gtk { }; - qastools = qt5.callPackage ../tools/audio/qastools { }; + qastools = libsForQt5.callPackage ../tools/audio/qastools { }; - qesteidutil = qt5.callPackage ../tools/security/qesteidutil { } ; - qdigidoc = qt5.callPackage ../tools/security/qdigidoc { } ; + qesteidutil = libsForQt5.callPackage ../tools/security/qesteidutil { } ; + qdigidoc = libsForQt5.callPackage ../tools/security/qdigidoc { } ; esteidfirefoxplugin = callPackage ../applications/networking/browsers/mozilla-plugins/esteidfirefoxplugin { }; @@ -3778,7 +3778,9 @@ with pkgs; quazip = quazip_qt4; }; - quazip_qt4 = self.qt5.quazip.override { qt = qt4; qmakeHook = qmake4Hook; }; + quazip_qt4 = libsForQt5.quazip.override { + qtbase = qt4; qmakeHook = qmake4Hook; + }; scrot = callPackage ../tools/graphics/scrot { }; @@ -3820,7 +3822,7 @@ with pkgs; siege = callPackage ../tools/networking/siege {}; - sigil = qt55.callPackage ../applications/editors/sigil { }; + sigil = libsForQt55.callPackage ../applications/editors/sigil { }; # aka., gpg-tools signing-party = callPackage ../tools/security/signing-party { }; @@ -3928,7 +3930,7 @@ with pkgs; su-exec = callPackage ../tools/security/su-exec {}; - subsurface = qt5.callPackage ../applications/misc/subsurface { }; + subsurface = libsForQt5.callPackage ../applications/misc/subsurface { }; sudo = callPackage ../tools/security/sudo { }; @@ -4060,7 +4062,7 @@ with pkgs; thin-provisioning-tools = callPackage ../tools/misc/thin-provisioning-tools { }; - tiled = qt5.callPackage ../applications/editors/tiled { }; + tiled = libsForQt5.callPackage ../applications/editors/tiled { }; timemachine = callPackage ../applications/audio/timemachine { }; @@ -6284,7 +6286,7 @@ with pkgs; cmakeWithGui = cmakeCurses.override { useQt4 = true; }; # Does not actually depend on Qt 5 - extra-cmake-modules = qt5.ecmNoHooks; + extra-cmake-modules = libsForQt5.ecmNoHooks; coccinelle = callPackage ../development/tools/misc/coccinelle { ocamlPackages = ocamlPackages_4_01_0; @@ -6663,7 +6665,7 @@ with pkgs; premake = premake4; - qtcreator = qt5.callPackage ../development/qtcreator { }; + qtcreator = libsForQt5.callPackage ../development/qtcreator { }; r10k = callPackage ../tools/system/r10k { }; @@ -9288,28 +9290,52 @@ with pkgs; developerBuild = true; }); - qt55 = - let imported = import ../development/libraries/qt-5/5.5 { inherit pkgs; }; - # Libraries that cannot be built with newer versions of Qt 5 - qt55Only = self: with self; { - # Requires Qt Quick (deprecated in Qt 5.5, removed from Qt 5.6) - qmltermwidget = callPackage ../development/libraries/qmltermwidget { }; - }; - in recurseIntoAttrs (imported.override (super: self: qt5LibsFun self // qt55Only self)); + qt55 = recurseIntoAttrs (import ../development/libraries/qt-5/5.5 { + inherit newScope; + inherit stdenv fetchurl makeSetupHook makeWrapper; + bison = bison2; # error: too few arguments to function 'int yylex(... + cups = if stdenv.isLinux then cups else null; + harfbuzz = harfbuzz-icu; + mesa = mesa_noglu; + inherit perl; + inherit (gnome2) libgnomeui GConf gnome_vfs; + inherit (gst_all_1) gstreamer gst-plugins-base; + }); - qt56 = - let imported = import ../development/libraries/qt-5/5.6 { inherit pkgs; }; - in recurseIntoAttrs (imported.override (super: qt5LibsFun)); + libsForQt55 = recurseIntoAttrs (lib.makeScope qt55.newScope mkLibsForQt5); - qt57 = - let imported = import ../development/libraries/qt-5/5.7 { inherit pkgs; }; - in recurseIntoAttrs (imported.override (super: qt5LibsFun)); + qt56 = recurseIntoAttrs (import ../development/libraries/qt-5/5.6 { + inherit newScope; + inherit stdenv fetchurl makeSetupHook makeWrapper; + bison = bison2; # error: too few arguments to function 'int yylex(... + cups = if stdenv.isLinux then cups else null; + harfbuzz = harfbuzz-icu; + mesa = mesa_noglu; + inherit perl; + inherit (gst_all_1) gstreamer gst-plugins-base; + }); + + libsForQt56 = recurseIntoAttrs (lib.makeScope qt56.newScope mkLibsForQt5); + + qt57 = recurseIntoAttrs (import ../development/libraries/qt-5/5.7 { + inherit newScope; + inherit stdenv fetchurl makeSetupHook makeWrapper; + bison = bison2; # error: too few arguments to function 'int yylex(... + cups = if stdenv.isLinux then cups else null; + harfbuzz = harfbuzz-icu; + mesa = mesa_noglu; + inherit perl; + inherit (gst_all_1) gstreamer gst-plugins-base; + }); + + libsForQt57 = recurseIntoAttrs (lib.makeScope qt57.newScope mkLibsForQt5); qt5 = qt56; + libsForQt5 = libsForQt56; - qt5ct = qt5.callPackage ../tools/misc/qt5ct { }; + qt5ct = libsForQt5.callPackage ../tools/misc/qt5ct { }; - qt5LibsFun = self: with self; + mkLibsForQt5 = self: with self; let kdeFrameworks = import ../development/libraries/kde-frameworks { inherit pkgs; } self; in { @@ -9367,6 +9393,8 @@ with pkgs; qca-qt5 = callPackage ../development/libraries/qca-qt5 { }; + qmltermwidget = callPackage ../development/libraries/qmltermwidget { }; + qscintilla = callPackage ../development/libraries/qscintilla { withQt5 = true; }; @@ -9377,9 +9405,7 @@ with pkgs; qtstyleplugins = callPackage ../development/libraries/qtstyleplugins { }; - quazip = callPackage ../development/libraries/quazip { - qt = qtbase; - }; + quazip = callPackage ../development/libraries/quazip { }; qwt = callPackage ../development/libraries/qwt/6.nix { }; @@ -12474,7 +12500,7 @@ with pkgs; xlsx2csv = pythonPackages.xlsx2csv; - zeal = qt5.callPackage ../data/documentation/zeal { }; + zeal = libsForQt5.callPackage ../data/documentation/zeal { }; ### APPLICATIONS @@ -12568,13 +12594,13 @@ with pkgs; antfs-cli = callPackage ../applications/misc/antfs-cli {}; - antimony = qt5.callPackage ../applications/graphics/antimony {}; + antimony = libsForQt5.callPackage ../applications/graphics/antimony {}; antiword = callPackage ../applications/office/antiword {}; ao = callPackage ../applications/graphics/ao {}; - aqemu = qt5.callPackage ../applications/virtualization/aqemu { }; + aqemu = libsForQt5.callPackage ../applications/virtualization/aqemu { }; ardour = callPackage ../applications/audio/ardour { inherit (gnome2) libgnomecanvas libgnomecanvasmm; @@ -12600,7 +12626,7 @@ with pkgs; astroid = callPackage ../applications/networking/mailreaders/astroid { }; audacious = callPackage ../applications/audio/audacious { }; - audaciousQt5 = qt5.callPackage ../applications/audio/audacious/qt-5.nix { }; + audaciousQt5 = libsForQt5.callPackage ../applications/audio/audacious/qt-5.nix { }; audacity = callPackage ../applications/audio/audacity { }; @@ -12662,7 +12688,7 @@ with pkgs; }; awesome = awesome-4-0; - awesomebump = qt5.callPackage ../applications/graphics/awesomebump { }; + awesomebump = libsForQt5.callPackage ../applications/graphics/awesomebump { }; inherit (gnome3) baobab; @@ -12733,7 +12759,7 @@ with pkgs; bluejeans = callPackage ../applications/networking/browsers/mozilla-plugins/bluejeans { }; - bomi = qt5.callPackage ../applications/video/bomi { + bomi = libsForQt5.callPackage ../applications/video/bomi { youtube-dl = pythonPackages.youtube-dl; pulseSupport = config.pulseaudio or true; ffmpeg = ffmpeg_2; @@ -12761,7 +12787,7 @@ with pkgs; calcurse = callPackage ../applications/misc/calcurse { }; - calibre = qt5.callPackage ../applications/misc/calibre { }; + calibre = libsForQt5.callPackage ../applications/misc/calibre { }; calligra = kde4.callPackage ../applications/office/calligra { vc = vc_0_7; @@ -12782,7 +12808,7 @@ with pkgs; cava = callPackage ../applications/audio/cava { }; - cb2bib = qt5.callPackage ../applications/office/cb2bib { }; + cb2bib = libsForQt5.callPackage ../applications/office/cb2bib { }; cbatticon = callPackage ../applications/misc/cbatticon { }; @@ -12857,7 +12883,7 @@ with pkgs; cni = callPackage ../applications/networking/cluster/cni {}; - communi = qt5.callPackage ../applications/networking/irc/communi { }; + communi = libsForQt5.callPackage ../applications/networking/irc/communi { }; compiz = callPackage ../applications/window-managers/compiz { inherit (gnome2) GConf ORBit2 metacity; @@ -12904,7 +12930,7 @@ with pkgs; cutecom = callPackage ../tools/misc/cutecom { }; cutegram = - let callpkg = qt55.callPackage; + let callpkg = libsForQt55.callPackage; in callpkg ../applications/networking/instant-messengers/telegram/cutegram rec { libqtelegram-aseman-edition = callpkg ../applications/networking/instant-messengers/telegram/libqtelegram-aseman-edition { }; telegram-qml = callpkg ../applications/networking/instant-messengers/telegram/telegram-qml { @@ -12954,9 +12980,9 @@ with pkgs; plugins = []; }; - dfasma = qt5.callPackage ../applications/audio/dfasma { }; + dfasma = libsForQt5.callPackage ../applications/audio/dfasma { }; - dfilemanager = qt5.callPackage ../applications/misc/dfilemanager { }; + dfilemanager = libsForQt5.callPackage ../applications/misc/dfilemanager { }; dia = callPackage ../applications/graphics/dia { inherit (pkgs.gnome2) libart_lgpl libgnomeui; @@ -13304,7 +13330,7 @@ with pkgs; keepassx = callPackage ../applications/misc/keepassx { }; keepassx2 = callPackage ../applications/misc/keepassx/2.0.nix { }; - keepassx-community = qt5.callPackage ../applications/misc/keepassx/community.nix { }; + keepassx-community = libsForQt5.callPackage ../applications/misc/keepassx/community.nix { }; inherit (gnome3) evince; evolution_data_server = gnome3.evolution_data_server; @@ -13339,7 +13365,7 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) CoreServices CoreAudio AudioUnit; }; - fmit = qt5.callPackage ../applications/audio/fmit { }; + fmit = libsForQt5.callPackage ../applications/audio/fmit { }; fmsynth = callPackage ../applications/audio/fmsynth { }; @@ -13357,7 +13383,7 @@ with pkgs; fribid = callPackage ../applications/networking/browsers/mozilla-plugins/fribid { }; - fritzing = qt5.callPackage ../applications/science/electronics/fritzing { }; + fritzing = libsForQt5.callPackage ../applications/science/electronics/fritzing { }; fvwm = callPackage ../applications/window-managers/fvwm { }; @@ -13388,7 +13414,7 @@ with pkgs; gnuradio-osmosdr = callPackage ../applications/misc/gnuradio-osmosdr { }; - goldendict = qt55.callPackage ../applications/misc/goldendict { }; + goldendict = libsForQt55.callPackage ../applications/misc/goldendict { }; inherit (ocamlPackages) google-drive-ocamlfuse; @@ -13496,7 +13522,7 @@ with pkgs; desktopName = "Firefox Beta"; }; - firestr = qt5.callPackage ../applications/networking/p2p/firestr + firestr = libsForQt5.callPackage ../applications/networking/p2p/firestr { boost = boost155; }; @@ -13647,7 +13673,7 @@ with pkgs; libquvi = callPackage ../applications/video/quvi/library.nix { }; - linssid = qt5.callPackage ../applications/networking/linssid { }; + linssid = libsForQt5.callPackage ../applications/networking/linssid { }; manuskript = callPackage ../applications/editors/manuskript { }; @@ -13734,7 +13760,7 @@ with pkgs; gosmore = callPackage ../applications/misc/gosmore { }; - gpsbabel = qt5.callPackage ../applications/misc/gpsbabel { }; + gpsbabel = libsForQt5.callPackage ../applications/misc/gpsbabel { }; gpscorrelate = callPackage ../applications/misc/gpscorrelate { }; @@ -13742,7 +13768,7 @@ with pkgs; gpsprune = callPackage ../applications/misc/gpsprune { }; - gpxsee = qt5.callPackage ../applications/misc/gpxsee { }; + gpxsee = libsForQt5.callPackage ../applications/misc/gpxsee { }; gtk2fontsel = callPackage ../applications/misc/gtk2fontsel { inherit (gnome2) gtk; @@ -13948,7 +13974,7 @@ with pkgs; lua = lua5_1; }; - ipe = qt5.callPackage ../applications/graphics/ipe { + ipe = libsForQt5.callPackage ../applications/graphics/ipe { ghostscript = ghostscriptX; texlive = texlive.combine { inherit (texlive) scheme-small; }; }; @@ -14016,13 +14042,13 @@ with pkgs; k3b = kde4.callPackage ../applications/misc/k3b/wrapper.nix { }; - k9copy = qt5.callPackage ../applications/video/k9copy {}; + k9copy = libsForQt5.callPackage ../applications/video/k9copy {}; kadu = kde4.callPackage ../applications/networking/instant-messengers/kadu { }; kde-telepathy = kde4.callPackage ../applications/networking/instant-messengers/telepathy/kde {}; - kdeconnect = qt5.callPackage ../applications/misc/kdeconnect { }; + kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; kdecoration-viewer = kde5.callPackage ../tools/misc/kdecoration-viewer {}; @@ -14038,9 +14064,9 @@ with pkgs; kermit = callPackage ../tools/misc/kermit { }; - keyfinder = qt5.callPackage ../applications/audio/keyfinder { }; + keyfinder = libsForQt5.callPackage ../applications/audio/keyfinder { }; - keyfinder-cli = qt5.callPackage ../applications/audio/keyfinder-cli { }; + keyfinder-cli = libsForQt5.callPackage ../applications/audio/keyfinder-cli { }; keymon = callPackage ../applications/video/key-mon { }; @@ -14069,9 +14095,9 @@ with pkgs; kmplayer = kde4.callPackage ../applications/video/kmplayer { }; - konversation = qt5.callPackage ../applications/networking/irc/konversation { }; + konversation = libsForQt5.callPackage ../applications/networking/irc/konversation { }; - krita = qt5.callPackage ../applications/graphics/krita { + krita = libsForQt5.callPackage ../applications/graphics/krita { vc = vc_0_7; openjpeg = openjpeg_1; }; @@ -14080,7 +14106,7 @@ with pkgs; ksuperkey = callPackage ../tools/X11/ksuperkey { }; - ktorrent = qt5.callPackage ../applications/networking/p2p/ktorrent { }; + ktorrent = libsForQt5.callPackage ../applications/networking/p2p/ktorrent { }; kubernetes = callPackage ../applications/networking/cluster/kubernetes { go = go_1_6; @@ -14204,7 +14230,7 @@ with pkgs; lrzsz = callPackage ../tools/misc/lrzsz { }; - luminanceHDR = qt55.callPackage ../applications/graphics/luminance-hdr { }; + luminanceHDR = libsForQt55.callPackage ../applications/graphics/luminance-hdr { }; lxdvdrip = callPackage ../applications/video/lxdvdrip { }; @@ -14223,7 +14249,7 @@ with pkgs; lynx = callPackage ../applications/networking/browsers/lynx { }; - lyx = qt5.callPackage ../applications/misc/lyx { }; + lyx = libsForQt5.callPackage ../applications/misc/lyx { }; mail-notification = callPackage ../desktops/gnome-2/desktop/mail-notification {}; @@ -14454,7 +14480,7 @@ with pkgs; else null; }; - musescore = qt55.callPackage ../applications/audio/musescore { }; + musescore = libsForQt55.callPackage ../applications/audio/musescore { }; mutt = callPackage ../applications/networking/mailreaders/mutt { }; mutt-with-sidebar = callPackage ../applications/networking/mailreaders/mutt { @@ -14502,11 +14528,11 @@ with pkgs; scudcloud = callPackage ../applications/networking/instant-messengers/scudcloud { }; - shotcut = qt5.callPackage ../applications/video/shotcut { }; + shotcut = libsForQt5.callPackage ../applications/video/shotcut { }; - smplayer = qt5.callPackage ../applications/video/smplayer { }; + smplayer = libsForQt5.callPackage ../applications/video/smplayer { }; - smtube = qt55.callPackage ../applications/video/smtube {}; + smtube = libsForQt55.callPackage ../applications/video/smtube {}; sudolikeaboss = callPackage ../tools/security/sudolikeaboss { }; @@ -14609,7 +14635,7 @@ with pkgs; oblogout = callPackage ../tools/X11/oblogout { }; - obs-studio = qt5.callPackage ../applications/video/obs-studio { + obs-studio = libsForQt5.callPackage ../applications/video/obs-studio { alsaSupport = stdenv.isLinux; pulseaudioSupport = config.pulseaudio or true; }; @@ -14709,9 +14735,9 @@ with pkgs; pflask = callPackage ../os-specific/linux/pflask {}; - photoqt = qt5.callPackage ../applications/graphics/photoqt { }; + photoqt = libsForQt5.callPackage ../applications/graphics/photoqt { }; - phototonic = qt5.callPackage ../applications/graphics/phototonic { }; + phototonic = libsForQt5.callPackage ../applications/graphics/phototonic { }; phrasendrescher = callPackage ../tools/security/phrasendrescher { }; @@ -14843,7 +14869,7 @@ with pkgs; pythonmagick = callPackage ../applications/graphics/PythonMagick { }; - qbittorrent = qt5.callPackage ../applications/networking/p2p/qbittorrent { + qbittorrent = libsForQt5.callPackage ../applications/networking/p2p/qbittorrent { boost = boost; libtorrentRasterbar = libtorrentRasterbar_1_0; }; @@ -14857,15 +14883,15 @@ with pkgs; qgis = callPackage ../applications/gis/qgis {}; - qgroundcontrol = qt55.callPackage ../applications/science/robotics/qgroundcontrol { }; + qgroundcontrol = libsForQt55.callPackage ../applications/science/robotics/qgroundcontrol { }; - qjackctl = qt5.callPackage ../applications/audio/qjackctl { }; + qjackctl = libsForQt5.callPackage ../applications/audio/qjackctl { }; qmidinet = callPackage ../applications/audio/qmidinet { }; qmidiroute = callPackage ../applications/audio/qmidiroute { }; - qmmp = qt5.callPackage ../applications/audio/qmmp { }; + qmmp = libsForQt5.callPackage ../applications/audio/qmmp { }; qnotero = callPackage ../applications/office/qnotero { }; @@ -14877,15 +14903,15 @@ with pkgs; qt = qt4; }; - qsyncthingtray = qt5.callPackage ../applications/misc/qsyncthingtray { }; + qsyncthingtray = libsForQt5.callPackage ../applications/misc/qsyncthingtray { }; qsynth = callPackage ../applications/audio/qsynth { }; qtbitcointrader = callPackage ../applications/misc/qtbitcointrader { }; - qtox = qt5.callPackage ../applications/networking/instant-messengers/qtox { }; + qtox = libsForQt5.callPackage ../applications/networking/instant-messengers/qtox { }; - qtpass = qt5.callPackage ../applications/misc/qtpass { }; + qtpass = libsForQt5.callPackage ../applications/misc/qtpass { }; qtpfsgui = callPackage ../applications/graphics/qtpfsgui { }; @@ -14893,7 +14919,7 @@ with pkgs; qtscrobbler = callPackage ../applications/audio/qtscrobbler { }; - quassel = qt5.callPackage ../applications/networking/irc/quassel { + quassel = libsForQt5.callPackage ../applications/networking/irc/quassel { monolithic = true; daemon = false; client = false; @@ -14919,7 +14945,7 @@ with pkgs; quirc = callPackage ../tools/graphics/quirc {}; - quiterss = qt5.callPackage ../applications/networking/newsreaders/quiterss {}; + quiterss = libsForQt5.callPackage ../applications/networking/newsreaders/quiterss {}; quodlibet-without-gst-plugins = callPackage ../applications/audio/quodlibet { }; @@ -14928,7 +14954,7 @@ with pkgs; gst-plugins-bad = null; }; - qutebrowser = qt5.callPackage ../applications/networking/browsers/qutebrowser { + qutebrowser = libsForQt5.callPackage ../applications/networking/browsers/qutebrowser { inherit (python3Packages) buildPythonApplication pyqt5 jinja2 pygments pyyaml pypeg2 cssutils; inherit (gst_all_1) gst-plugins-base gst-plugins-good gst-plugins-bad gst-plugins-ugly gst-libav; }; @@ -14947,7 +14973,7 @@ with pkgs; demo = false; }; - rapcad = qt55.callPackage ../applications/graphics/rapcad { boost = boost159; }; + rapcad = libsForQt55.callPackage ../applications/graphics/rapcad { boost = boost159; }; rapidsvn = callPackage ../applications/version-management/rapidsvn { }; @@ -14989,7 +15015,7 @@ with pkgs; retroshare06 = lowPrio (callPackage ../applications/networking/p2p/retroshare/0.6.nix { }); - ricochet = qt55.callPackage ../applications/networking/instant-messengers/ricochet { }; + ricochet = libsForQt55.callPackage ../applications/networking/instant-messengers/ricochet { }; ripser = callPackage ../applications/science/math/ripser { }; @@ -15169,13 +15195,13 @@ with pkgs; bittorrentSync14 = callPackage ../applications/networking/bittorrentsync/1.4.x.nix { }; bittorrentSync20 = callPackage ../applications/networking/bittorrentsync/2.0.x.nix { }; - dropbox = qt5.callPackage ../applications/networking/dropbox { }; + dropbox = libsForQt5.callPackage ../applications/networking/dropbox { }; dropbox-cli = callPackage ../applications/networking/dropbox-cli { }; insync = callPackage ../applications/networking/insync { }; - lightdm = qt5.callPackage ../applications/display-managers/lightdm { + lightdm = libsForQt5.callPackage ../applications/display-managers/lightdm { qt4 = null; withQt5 = false; }; @@ -15196,11 +15222,11 @@ with pkgs; printrun = callPackage ../applications/misc/printrun { }; - sddm = qt5.callPackage ../applications/display-managers/sddm { + sddm = libsForQt5.callPackage ../applications/display-managers/sddm { themes = []; # extra themes, etc. }; - skrooge = qt5.callPackage ../applications/office/skrooge {}; + skrooge = libsForQt5.callPackage ../applications/office/skrooge {}; slim = callPackage ../applications/display-managers/slim { libpng = libpng12; @@ -15222,7 +15248,7 @@ with pkgs; sipp = callPackage ../development/tools/misc/sipp { }; - sonic-visualiser = qt5.callPackage ../applications/audio/sonic-visualiser { + sonic-visualiser = libsForQt5.callPackage ../applications/audio/sonic-visualiser { inherit (pkgs.vamp) vampSDK; }; @@ -15337,7 +15363,7 @@ with pkgs; gconf = gnome2.GConf; }; - teamspeak_client = qt55.callPackage ../applications/networking/instant-messengers/teamspeak/client.nix { }; + teamspeak_client = libsForQt55.callPackage ../applications/networking/instant-messengers/teamspeak/client.nix { }; teamspeak_server = callPackage ../applications/networking/instant-messengers/teamspeak/server.nix { }; taskjuggler-2 = callPackage ../applications/misc/taskjuggler/2.x { }; @@ -15482,7 +15508,7 @@ with pkgs; boost = boost160; }; - twmn = qt5.callPackage ../applications/misc/twmn { }; + twmn = libsForQt5.callPackage ../applications/misc/twmn { }; umurmur = callPackage ../applications/networking/umurmur { }; @@ -15560,7 +15586,7 @@ with pkgs; neovim = callPackage ../applications/editors/neovim { }; - neovim-qt = qt5.callPackage ../applications/editors/neovim/qt.nix { }; + neovim-qt = libsForQt5.callPackage ../applications/editors/neovim/qt.nix { }; neovim-pygui = pythonPackages.neovim_gui; @@ -15648,7 +15674,7 @@ with pkgs; gtk = gtk2; }; - vlc_qt5 = qt5.vlc; + vlc_qt5 = libsForQt5.vlc; vmpk = callPackage ../applications/audio/vmpk { }; @@ -15861,7 +15887,7 @@ with pkgs; }; xbmc-retroarch-advanced-launchers = kodi-retroarch-advanced-launchers; - xca = qt5.callPackage ../applications/misc/xca { }; + xca = libsForQt5.callPackage ../applications/misc/xca { }; xcalib = callPackage ../tools/X11/xcalib { }; @@ -16147,13 +16173,13 @@ with pkgs; chessdb = callPackage ../games/chessdb { }; - chessx = qt5.callPackage ../games/chessx { }; + chessx = libsForQt5.callPackage ../games/chessx { }; chocolateDoom = callPackage ../games/chocolate-doom { }; ckan = callPackage ../games/ckan { }; - cockatrice = qt5.callPackage ../games/cockatrice { }; + cockatrice = libsForQt5.callPackage ../games/cockatrice { }; commandergenius = callPackage ../games/commandergenius { }; @@ -16232,7 +16258,7 @@ with pkgs; fish-fillets-ng = callPackage ../games/fish-fillets-ng {}; - flightgear = qt5.callPackage ../games/flightgear { }; + flightgear = libsForQt5.callPackage ../games/flightgear { }; freecell-solver = callPackage ../games/freecell-solver { }; @@ -16347,7 +16373,7 @@ with pkgs; minecraft-server = callPackage ../games/minecraft-server { }; - multimc = qt5.callPackage ../games/multimc { }; + multimc = libsForQt5.callPackage ../games/multimc { }; minetest = callPackage ../games/minetest { libpng = libpng12; @@ -16357,7 +16383,7 @@ with pkgs; mrrescue = callPackage ../games/mrrescue { }; - mudlet = qt5.callPackage ../games/mudlet { + mudlet = libsForQt5.callPackage ../games/mudlet { inherit (lua51Packages) luafilesystem lrexlib luazip luasqlite3; }; @@ -16500,7 +16526,7 @@ with pkgs; solarus = callPackage ../games/solarus { }; - solarus-quest-editor = qt5.callPackage ../development/tools/solarus-quest-editor { }; + solarus-quest-editor = libsForQt5.callPackage ../development/tools/solarus-quest-editor { }; # You still can override by passing more arguments. space-orbit = callPackage ../games/space-orbit { }; @@ -16633,7 +16659,7 @@ with pkgs; warsow = callPackage ../games/warsow { }; - warzone2100 = qt5.callPackage ../games/warzone2100 { }; + warzone2100 = libsForQt5.callPackage ../games/warzone2100 { }; wesnoth = callPackage ../games/wesnoth { }; @@ -16755,7 +16781,10 @@ with pkgs; lumina = callPackage ../desktops/lumina { }; - lxqt = recurseIntoAttrs (callPackage ../desktops/lxqt { }); + lxqt = recurseIntoAttrs (import ../desktops/lxqt { + inherit pkgs libsForQt5 fetchFromGitHub; + inherit (lib) makeScope; + }); mate = recurseIntoAttrs (callPackage ../desktops/mate { callPackage = newScope pkgs.mate; @@ -16791,14 +16820,14 @@ with pkgs; merged = self: { plasma = plasma self; - frameworks = qt5.kdeFrameworks; + frameworks = libsForQt5.kdeFrameworks; applications = applications self; } - // qt5.kdeFrameworks + // libsForQt5.kdeFrameworks // plasma self // applications self; in - recurseIntoAttrs (lib.makeScope qt5.newScope merged); + recurseIntoAttrs (lib.makeScope libsForQt5.newScope merged); theme-vertex = callPackage ../misc/themes/vertex { }; @@ -17305,7 +17334,7 @@ with pkgs; yacas = callPackage ../applications/science/math/yacas { }; - speedcrunch = qt5.callPackage ../applications/science/math/speedcrunch { }; + speedcrunch = libsForQt5.callPackage ../applications/science/math/speedcrunch { }; ### SCIENCE / MISC @@ -17336,7 +17365,7 @@ with pkgs; spyder = pythonPackages.spyder; - stellarium = qt5.callPackage ../applications/science/astronomy/stellarium { }; + stellarium = libsForQt5.callPackage ../applications/science/astronomy/stellarium { }; tulip = callPackage ../applications/science/misc/tulip { cmake = cmake_2_8; @@ -17398,7 +17427,7 @@ with pkgs; ### MISC - antimicro = qt5.callPackage ../tools/misc/antimicro { }; + antimicro = libsForQt5.callPackage ../tools/misc/antimicro { }; atari800 = callPackage ../misc/emulators/atari800 { }; @@ -17668,9 +17697,9 @@ with pkgs; pcre = pcre-cpp; }); - redis-desktop-manager = qt55.callPackage ../applications/misc/redis-desktop-manager { }; + redis-desktop-manager = libsForQt55.callPackage ../applications/misc/redis-desktop-manager { }; - robomongo = qt5.callPackage ../applications/misc/robomongo { }; + robomongo = libsForQt5.callPackage ../applications/misc/robomongo { }; rucksack = callPackage ../development/tools/rucksack { }; @@ -17872,7 +17901,7 @@ with pkgs; vips = callPackage ../tools/graphics/vips { }; nip2 = callPackage ../tools/graphics/nip2 { }; - vokoscreen = qt5.callPackage ../applications/video/vokoscreen { }; + vokoscreen = libsForQt5.callPackage ../applications/video/vokoscreen { }; wavegain = callPackage ../applications/audio/wavegain { }; @@ -18035,7 +18064,7 @@ with pkgs; discord = callPackage ../applications/networking/instant-messengers/discord { }; - golden-cheetah = qt5.callPackage ../applications/misc/golden-cheetah {}; + golden-cheetah = libsForQt5.callPackage ../applications/misc/golden-cheetah {}; linkchecker = callPackage ../tools/networking/linkchecker { }; @@ -18057,9 +18086,9 @@ with pkgs; zuki-themes = callPackage ../misc/themes/zuki { }; - zoom-us = qt55.callPackage ../applications/networking/instant-messengers/zoom-us {}; + zoom-us = libsForQt55.callPackage ../applications/networking/instant-messengers/zoom-us {}; - tora = qt5.callPackage ../development/tools/tora {}; + tora = libsForQt5.callPackage ../development/tools/tora {}; xulrunner = firefox-unwrapped; From c1fc4af9ae25998888495cdc8b6d98fc2ec9474d Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 11:16:31 -0600 Subject: [PATCH 167/216] Update Qt and KDE documentation - Describe the new `libsForQt5.callPackage` interface - Emphasize that Qt dependencies must be imported unqualified - Describe the new `kdeWrapper` wrapper generator --- doc/languages-frameworks/qt.xml | 56 ++++++--------------------------- 1 file changed, 10 insertions(+), 46 deletions(-) diff --git a/doc/languages-frameworks/qt.xml b/doc/languages-frameworks/qt.xml index 093c33c25a1..b6c8f0e899e 100644 --- a/doc/languages-frameworks/qt.xml +++ b/doc/languages-frameworks/qt.xml @@ -2,67 +2,31 @@ xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="sec-language-qt"> -Qt +Qt and KDE -The information in this section applies to Qt 5.5 and later. - -Qt is an application development toolkit for C++. Although it is -not a distinct programming language, there are special considerations -for packaging Qt-based programs and libraries. A small set of tools -and conventions has grown out of these considerations. +Qt is a comprehensive desktop and mobile application development toolkit for C++. Legacy support is available for Qt 3 and Qt 4, but all current development uses Qt 5. The Qt 5 packages in Nixpkgs are updated frequently to take advantage of new features, but older versions are typically retained to support packages that may not be compatible with the latest version. When packaging applications and libraries for Nixpkgs, it is important to ensure that compatible versions of Qt 5 are used throughout; this consideration motivates the tools described below.
Libraries -Packages that provide libraries should be listed in -qt5LibsFun so that the library is built with each -Qt version. A set of packages is provided for each version of Qt; for -example, qt5Libs always provides libraries built -with the latest version, qt55Libs provides -libraries built with Qt 5.5, and so on. To avoid version conflicts, no -top-level attributes are created for these packages. +Libraries that depend on Qt 5 should be built with each available version to avoid linking a dependent package against incompatible versions of Qt 5. (Although Qt 5 maintains backward ABI compatibility, linking against multiple versions at once is generally not possible; at best it will lead to runtime faults.) Packages that provide libraries should be added to the top-level function mkLibsForQt5, which is used to build a set of libraries for every Qt 5 version. The callPackage provided in this scope will ensure that only one Qt version will be used throughout the dependency tree. Dependencies should be imported unqualified, i.e. qtbase not qt5.qtbase, so that callPackage can do its work. Do not import a package set such as qt5 or libsForQt5 into your package; although it may work fine in the moment, it could well break at the next Qt update. + +If a library does not support a particular version of Qt 5, it is best to mark it as broken by setting its meta.broken attribute. A package may be marked broken for certain versions by testing the qtbase.version attribute, which will always give the current Qt 5 version.
-
Programs +
Applications -Application packages do not need to be built with every Qt -version. To ensure consistency between the package's dependencies, -call the package with qt5Libs.callPackage instead -of the usual callPackage. An older version may be -selected in case of incompatibility. For example, to build with Qt -5.5, call the package with -qt55Libs.callPackage. +Applications generally do not need to be built with every Qt version because they do not provide any libraries for dependent packages to link against. The primary consideration is merely ensuring that the application itself and its dependencies are linked against only one version of Qt. To call your application expression, use libsForQt5.callPackage instead of callPackage. Dependencies should be imported unqualified, i.e. qtbase not qt5.qtbase. Do not import a package set such as qt5 or libsForQt5 into your package; although it may work fine in the moment, it could well break at the next Qt update. -Several environment variables must be set at runtime for Qt -applications to function correctly, including: +It is generally best to build an application package against the libsForQt5 library set. In case a package does not build with the latest Qt version, it is possible to pick a set pinned to a particular version, e.g. libsForQt55 for Qt 5.5, if that is the latest version the package supports. - - QT_PLUGIN_PATH - QML_IMPORT_PATH - QML2_IMPORT_PATH - XDG_DATA_DIRS - - -To ensure that these are set correctly, the program must be wrapped by -invoking wrapQtProgram program -during installation (for example, during -fixupPhase). wrapQtProgram -accepts the same options as makeWrapper. - +Qt-based applications require that several paths be set at runtime. This is accomplished by wrapping the provided executables in a package with wrapQtProgram or makeQtWrapper during the postFixup phase. To use the wrapper generators, add makeQtWrapper to nativeBuildInputs. The wrapper generators support the same options as wrapProgram and makeWrapper respectively. It is usually only necessary to generate wrappers for programs intended to be invoked by the user.
KDE -Many of the considerations above also apply to KDE packages, -especially the need to set the correct environment variables at -runtime. To ensure that this is done, invoke wrapKDEProgram -program during -installation. wrapKDEProgram also generates a -ksycoca database so that required data and services -can be found. Like its Qt counterpart, -wrapKDEProgram accepts the same options as -makeWrapper. +The KDE Frameworks are a set of libraries for Qt 5 which form the basis of the Plasma desktop environment and the KDE Applications suite. Packaging a Frameworks-based library does not require any steps beyond those described above for general Qt-based libraries. Frameworks-based applications should not use makeQtWrapper; instead, use kdeWrapper to create the necessary wrappers: kdeWrapper { unwrapped = expr; targets = exes; }, where expr is the un-wrapped package expression and exes is a list of strings giving the relative paths to programs in the package which should be wrapped.
From 4e36b374d080285f3512a90b079da2b28fa800f5 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 09:44:19 -0600 Subject: [PATCH 168/216] heaptrack: Fix packaging errors --- .../tools/profiling/heaptrack/default.nix | 15 ++++++++++----- 1 file changed, 10 insertions(+), 5 deletions(-) diff --git a/pkgs/development/tools/profiling/heaptrack/default.nix b/pkgs/development/tools/profiling/heaptrack/default.nix index 378073d16c0..5d151b9c9a3 100644 --- a/pkgs/development/tools/profiling/heaptrack/default.nix +++ b/pkgs/development/tools/profiling/heaptrack/default.nix @@ -1,5 +1,8 @@ -{ stdenv, fetchFromGitHub, cmake, zlib, boost162, libunwind, - elfutils, qt5, kde5, sparsehash }: +{ + stdenv, fetchFromGitHub, cmake, ecm, + zlib, boost162, libunwind, elfutils, sparsehash, + qtbase, kio, kitemmodels, threadweaver, kconfigwidgets, kcoreaddons, +}: stdenv.mkDerivation rec { name = "heaptrack-${version}"; @@ -12,9 +15,11 @@ stdenv.mkDerivation rec { sha256 = "0dqchd2r4khv9gzj4n0qjii2nqygkj5jclkji8jbvivx5qwsqznc"; }; - buildInputs = [ cmake zlib boost162 libunwind elfutils sparsehash - qt5.ecm qt5.qtbase kde5.kio kde5.kitemmodels - kde5.threadweaver kde5.kconfigwidgets kde5.kcoreaddons ]; + nativeBuildInputs = [ cmake ecm ]; + buildInputs = [ + zlib boost162 libunwind elfutils sparsehash + qtbase kio kitemmodels threadweaver kconfigwidgets kcoreaddons + ]; meta = with stdenv.lib; { description = "Heap memory profiler for Linux"; From 055c0f4405cf72af40f063919a04590a893ba782 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 09:44:29 -0600 Subject: [PATCH 169/216] lxqt: Fix packaging errors --- pkgs/desktops/lxqt/base/liblxqt/default.nix | 15 +++---- pkgs/desktops/lxqt/core/libfm-qt/default.nix | 15 ++++--- .../desktops/lxqt/core/lxqt-about/default.nix | 18 ++++---- .../desktops/lxqt/core/lxqt-admin/default.nix | 18 ++++---- .../lxqt/core/lxqt-config/default.nix | 22 +++++----- .../lxqt/core/lxqt-globalkeys/default.nix | 20 ++++----- .../lxqt/core/lxqt-notificationd/default.nix | 18 ++++---- .../core/lxqt-openssh-askpass/default.nix | 18 ++++---- .../desktops/lxqt/core/lxqt-panel/default.nix | 41 +++++++++++-------- .../lxqt/core/lxqt-policykit/default.nix | 24 ++++++----- .../core/lxqt-powermanagement/default.nix | 22 +++++----- .../lxqt/core/lxqt-qtplugin/default.nix | 22 ++++++---- .../lxqt/core/lxqt-runner/default.nix | 20 ++++----- .../lxqt/core/lxqt-session/default.nix | 18 ++++---- pkgs/desktops/lxqt/core/lxqt-sudo/default.nix | 18 ++++---- pkgs/desktops/lxqt/default.nix | 24 +++++------ .../lxqt/optional/compton-conf/default.nix | 6 +-- .../lxqt/optional/screengrab/default.nix | 14 +++---- 18 files changed, 185 insertions(+), 168 deletions(-) diff --git a/pkgs/desktops/lxqt/base/liblxqt/default.nix b/pkgs/desktops/lxqt/base/liblxqt/default.nix index 2d4faee5cf3..9363dba8669 100644 --- a/pkgs/desktops/lxqt/base/liblxqt/default.nix +++ b/pkgs/desktops/lxqt/base/liblxqt/default.nix @@ -1,4 +1,5 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt, xorg }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, + qtx11extras, qttools, qtsvg, libqtxdg, kwindowsystem, xorg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,15 +15,15 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtx11extras - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.libqtxdg + qtx11extras + qttools + qtsvg + kwindowsystem + libqtxdg xorg.libXScrnSaver ]; diff --git a/pkgs/desktops/lxqt/core/libfm-qt/default.nix b/pkgs/desktops/lxqt/core/libfm-qt/default.nix index 4c7ecbc1804..78c0a926b9c 100644 --- a/pkgs/desktops/lxqt/core/libfm-qt/default.nix +++ b/pkgs/desktops/lxqt/core/libfm-qt/default.nix @@ -1,5 +1,8 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, xorg, -libfm, menu-cache }: +{ + stdenv, fetchFromGitHub, cmake, pkgconfig, lxqt-build-tools, + xorg, libfm, menu-cache, + qtx11extras, qttools +}: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -16,18 +19,18 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtx11extras - qt5.qttools + qtx11extras + qttools libfm menu-cache ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - + meta = with stdenv.lib; { description = "Core library of PCManFM-Qt (Qt binding for libfm)"; homepage = https://github.com/lxde/libfm-qt; diff --git a/pkgs/desktops/lxqt/core/lxqt-about/default.nix b/pkgs/desktops/lxqt/core/lxqt-about/default.nix index 34491d0414b..ac81391af1d 100644 --- a/pkgs/desktops/lxqt/core/lxqt-about/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-about/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, standardPatch, qtx11extras, qttools, qtsvg, kwindowsystem, liblxqt, libqtxdg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,21 +14,21 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtx11extras - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtx11extras + qttools + qtsvg + kwindowsystem + liblxqt + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "Dialogue window providing information about LXQt and the system it's running on"; diff --git a/pkgs/desktops/lxqt/core/lxqt-admin/default.nix b/pkgs/desktops/lxqt/core/lxqt-admin/default.nix index 2e6ae9858ad..23b142f352f 100644 --- a/pkgs/desktops/lxqt/core/lxqt-admin/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-admin/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt, polkit }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, standardPatch, qtx11extras, qttools, qtsvg, kwindowsystem, liblxqt, libqtxdg, polkit }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,22 +14,22 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtx11extras - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtx11extras + qttools + qtsvg + kwindowsystem + liblxqt + libqtxdg polkit ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "LXQt system administration tool"; diff --git a/pkgs/desktops/lxqt/core/lxqt-config/default.nix b/pkgs/desktops/lxqt/core/lxqt-config/default.nix index a16fcd21f68..7b38d2eec6f 100644 --- a/pkgs/desktops/lxqt/core/lxqt-config/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-config/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, xorg }: +{ stdenv, fetchFromGitHub, cmake, pkgconfig, lxqt-build-tools, standardPatch, qtbase, qtx11extras, qttools, qtsvg, kwindowsystem, libkscreen, liblxqt, libqtxdg, libpthreadstubs, xorg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -15,18 +15,18 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qtx11extras - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - kde5.libkscreen - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qtx11extras + qttools + qtsvg + kwindowsystem + libkscreen + liblxqt + libqtxdg xorg.libpthreadstubs xorg.libXdmcp xorg.libXScrnSaver @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "Tools to configure LXQt and the underlying operating system"; diff --git a/pkgs/desktops/lxqt/core/lxqt-globalkeys/default.nix b/pkgs/desktops/lxqt/core/lxqt-globalkeys/default.nix index a23bff6e8d1..73248da1ef8 100644 --- a/pkgs/desktops/lxqt/core/lxqt-globalkeys/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-globalkeys/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, standardPatch, qtbase, qttools, qtx11extras, qtsvg, kwindowsystem, liblxqt, libqtxdg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,22 +14,22 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + kwindowsystem + liblxqt + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "Daemon used to register global keyboard shortcuts"; diff --git a/pkgs/desktops/lxqt/core/lxqt-notificationd/default.nix b/pkgs/desktops/lxqt/core/lxqt-notificationd/default.nix index 3646a461c83..cb10df5a1b7 100644 --- a/pkgs/desktops/lxqt/core/lxqt-notificationd/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-notificationd/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, qtbase, qttools, qtsvg, kwindowsystem, liblxqt, libqtxdg, lxqt-common }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,17 +14,17 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg - lxqt.lxqt-common + qtbase + qttools + qtsvg + kwindowsystem + liblxqt + libqtxdg + lxqt-common ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; diff --git a/pkgs/desktops/lxqt/core/lxqt-openssh-askpass/default.nix b/pkgs/desktops/lxqt/core/lxqt-openssh-askpass/default.nix index 9190718fde4..a52ce02cd14 100644 --- a/pkgs/desktops/lxqt/core/lxqt-openssh-askpass/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-openssh-askpass/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, qtbase, qttools, qtsvg, qtx11extras, kwindowsystem, liblxqt, libqtxdg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,17 +14,17 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + kwindowsystem + liblxqt + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; diff --git a/pkgs/desktops/lxqt/core/lxqt-panel/default.nix b/pkgs/desktops/lxqt/core/lxqt-panel/default.nix index 0c899c67dad..dfbd39acaa3 100644 --- a/pkgs/desktops/lxqt/core/lxqt-panel/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-panel/default.nix @@ -1,6 +1,11 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, xorg, -libstatgrab, lm_sensors, libpulseaudio, alsaLib, menu-cache, -lxmenu-data }: +{ + stdenv, fetchFromGitHub, standardPatch, + cmake, pkgconfig, lxqt-build-tools, + qtbase, qttools, qtx11extras, qtsvg, libdbusmenu, kwindowsystem, solid, + kguiaddons, liblxqt, libqtxdg, lxqt-common, lxqt-globalkeys, libsysstat, + xorg, libstatgrab, lm_sensors, libpulseaudio, alsaLib, menu-cache, + lxmenu-data +}: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -17,23 +22,23 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - qt5.libdbusmenu - kde5.kwindowsystem - kde5.solid - kde5.kguiaddons - lxqt.liblxqt - lxqt.libqtxdg - lxqt.lxqt-common - lxqt.lxqt-globalkeys - lxqt.libsysstat + qtbase + qttools + qtx11extras + qtsvg + libdbusmenu + kwindowsystem + solid + kguiaddons + liblxqt + libqtxdg + lxqt-common + lxqt-globalkeys + libsysstat xorg.libpthreadstubs xorg.libXdmcp libstatgrab @@ -46,7 +51,7 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "The LXQt desktop panel"; diff --git a/pkgs/desktops/lxqt/core/lxqt-policykit/default.nix b/pkgs/desktops/lxqt/core/lxqt-policykit/default.nix index f4351a9598d..bdcc0a4d606 100644 --- a/pkgs/desktops/lxqt/core/lxqt-policykit/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-policykit/default.nix @@ -1,4 +1,8 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt }: +{ + stdenv, fetchFromGitHub, cmake, pkgconfig, lxqt-build-tools, + qtbase, qttools, qtx11extras, qtsvg, polkit-qt, kwindowsystem, liblxqt, + libqtxdg, +}: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -15,18 +19,18 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - qt5.polkit-qt - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + polkit-qt + kwindowsystem + liblxqt + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; diff --git a/pkgs/desktops/lxqt/core/lxqt-powermanagement/default.nix b/pkgs/desktops/lxqt/core/lxqt-powermanagement/default.nix index b7321c64668..d3793a9d928 100644 --- a/pkgs/desktops/lxqt/core/lxqt-powermanagement/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-powermanagement/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, qtbase, qttools, qtx11extras, qtsvg, kwindowsystem, solid, kidletime, liblxqt, libqtxdg }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,19 +14,19 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - kde5.kwindowsystem - kde5.solid - kde5.kidletime - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + kwindowsystem + solid + kidletime + liblxqt + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; diff --git a/pkgs/desktops/lxqt/core/lxqt-qtplugin/default.nix b/pkgs/desktops/lxqt/core/lxqt-qtplugin/default.nix index 49fa7c61633..d5b8987bbb8 100644 --- a/pkgs/desktops/lxqt/core/lxqt-qtplugin/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-qtplugin/default.nix @@ -1,4 +1,8 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, lxqt }: +{ + stdenv, fetchFromGitHub, standardPatch, + cmake, lxqt-build-tools, + qtbase, qtx11extras, qttools, qtsvg, libdbusmenu, libqtxdg, +}: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,21 +18,21 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qtx11extras - qt5.qttools - qt5.qtsvg - qt5.libdbusmenu - lxqt.libqtxdg + qtbase + qtx11extras + qttools + qtsvg + libdbusmenu + libqtxdg ]; cmakeFlags = [ "-DPULL_TRANSLATIONS=NO" ]; - postPatch = lxqt.standardPatch; + postPatch = standardPatch; meta = with stdenv.lib; { description = "LXQt Qt platform integration plugin"; diff --git a/pkgs/desktops/lxqt/core/lxqt-runner/default.nix b/pkgs/desktops/lxqt/core/lxqt-runner/default.nix index f420e9e410a..550025f8e87 100644 --- a/pkgs/desktops/lxqt/core/lxqt-runner/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-runner/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, +{ stdenv, fetchFromGitHub, cmake, pkgconfig, lxqt-build-tools, qtbase, qttools, qtsvg, kwindowsystem, liblxqt, libqtxdg, lxqt-common, lxqt-globalkeys, menu-cache, muparser }: stdenv.mkDerivation rec { @@ -16,18 +16,18 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg - lxqt.lxqt-common - lxqt.lxqt-globalkeys + qtbase + qttools + qtsvg + kwindowsystem + liblxqt + libqtxdg + lxqt-common + lxqt-globalkeys menu-cache muparser ]; diff --git a/pkgs/desktops/lxqt/core/lxqt-session/default.nix b/pkgs/desktops/lxqt/core/lxqt-session/default.nix index 1dfdd303a72..35879af28e8 100644 --- a/pkgs/desktops/lxqt/core/lxqt-session/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-session/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, xorg, xdg-user-dirs }: +{ stdenv, fetchFromGitHub, cmake, pkgconfig, lxqt-build-tools, qtbase, qttools, qtsvg, kwindowsystem, liblxqt, libqtxdg, lxqt-common, xorg, xdg-user-dirs }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -15,17 +15,17 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg - lxqt.lxqt-common + qtbase + qttools + qtsvg + kwindowsystem + liblxqt + libqtxdg + lxqt-common xorg.libpthreadstubs xorg.libXdmcp xdg-user-dirs diff --git a/pkgs/desktops/lxqt/core/lxqt-sudo/default.nix b/pkgs/desktops/lxqt/core/lxqt-sudo/default.nix index 83b16587523..1e235af3c90 100644 --- a/pkgs/desktops/lxqt/core/lxqt-sudo/default.nix +++ b/pkgs/desktops/lxqt/core/lxqt-sudo/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, qt5, kde5, lxqt, sudo }: +{ stdenv, fetchFromGitHub, cmake, lxqt-build-tools, qtbase, qttools, qtx11extras, qtsvg, kwindowsystem, liblxqt, libqtxdg, sudo }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -14,17 +14,17 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake - lxqt.lxqt-build-tools + lxqt-build-tools ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - kde5.kwindowsystem - lxqt.liblxqt - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + kwindowsystem + liblxqt + libqtxdg sudo ]; diff --git a/pkgs/desktops/lxqt/default.nix b/pkgs/desktops/lxqt/default.nix index 3cd8fdf2212..00e36e342fa 100644 --- a/pkgs/desktops/lxqt/default.nix +++ b/pkgs/desktops/lxqt/default.nix @@ -1,13 +1,11 @@ -{ pkgs, newScope, fetchFromGitHub }: +{ pkgs, makeScope, libsForQt5, fetchFromGitHub }: let - callPackage = newScope self; - - self = rec { + packages = self: with self; { # For compiling information, see: # - https://github.com/lxde/lxqt/wiki/Building-from-source - + standardPatch = '' for file in $(find . -name CMakeLists.txt); do substituteInPlace $file \ @@ -37,7 +35,9 @@ let lxqt-about = callPackage ./core/lxqt-about { }; lxqt-admin = callPackage ./core/lxqt-admin { }; lxqt-common = callPackage ./core/lxqt-common { }; - lxqt-config = callPackage ./core/lxqt-config { }; + lxqt-config = callPackage ./core/lxqt-config { + inherit (pkgs.plasma5) libkscreen; + }; lxqt-globalkeys = callPackage ./core/lxqt-globalkeys { }; lxqt-l10n = callPackage ./core/lxqt-l10n { }; lxqt-notificationd = callPackage ./core/lxqt-notificationd { }; @@ -57,7 +57,7 @@ let ### OPTIONAL qterminal = callPackage ./optional/qterminal { }; - compton-conf = callPackage ./optional/compton-conf { }; + compton-conf = pkgs.qt5.callPackage ./optional/compton-conf { }; obconf-qt = callPackage ./optional/obconf-qt { }; lximage-qt = callPackage ./optional/lximage-qt { }; qps = callPackage ./optional/qps { }; @@ -66,14 +66,14 @@ let preRequisitePackages = [ pkgs.gvfs # virtual file systems support for PCManFM-QT - pkgs.kde5.kwindowsystem # provides some QT5 plugins needed by lxqt-panel - pkgs.kde5.libkscreen # provides plugins for screen management software + pkgs.libsForQt5.kwindowsystem # provides some QT5 plugins needed by lxqt-panel + pkgs.plasma5.libkscreen # provides plugins for screen management software pkgs.libfm pkgs.libfm-extra pkgs.lxmenu-data pkgs.menu-cache pkgs.openbox # default window manager - pkgs.qt5.qtsvg # provides QT5 plugins for svg icons + qt5.qtsvg # provides QT5 plugins for svg icons ]; corePackages = [ @@ -120,7 +120,7 @@ let qlipper ### Default icon theme - pkgs.kde5.oxygen-icons5 + qt5.oxygen-icons5 ### Screen saver pkgs.xscreensaver @@ -128,4 +128,4 @@ let }; -in self +in makeScope libsForQt5.newScope packages diff --git a/pkgs/desktops/lxqt/optional/compton-conf/default.nix b/pkgs/desktops/lxqt/optional/compton-conf/default.nix index c25ee10bd25..6e1ea128853 100644 --- a/pkgs/desktops/lxqt/optional/compton-conf/default.nix +++ b/pkgs/desktops/lxqt/optional/compton-conf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, libconfig }: +{ stdenv, fetchFromGitHub, cmake, pkgconfig, qtbase, qttools, lxqt, libconfig }: stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -19,8 +19,8 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - qt5.qtbase - qt5.qttools + qtbase + qttools libconfig ]; diff --git a/pkgs/desktops/lxqt/optional/screengrab/default.nix b/pkgs/desktops/lxqt/optional/screengrab/default.nix index b3524d36777..e8cc7c30fa1 100644 --- a/pkgs/desktops/lxqt/optional/screengrab/default.nix +++ b/pkgs/desktops/lxqt/optional/screengrab/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, pkgconfig, qt5, kde5, lxqt, xorg }: +{ stdenv, fetchFromGitHub, cmake, pkgconfig, qtbase, qttools, qtx11extras, qtsvg, kwindowsystem, libqtxdg, xorg }: stdenv.mkDerivation rec { name = "screengrab-unstable-2017-02-18"; @@ -13,12 +13,12 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkgconfig ]; buildInputs = [ - qt5.qtbase - qt5.qttools - qt5.qtx11extras - qt5.qtsvg - kde5.kwindowsystem - lxqt.libqtxdg + qtbase + qttools + qtx11extras + qtsvg + kwindowsystem + libqtxdg xorg.libpthreadstubs xorg.libXdmcp ]; From c1ddd2353bbf3085a3b82e12edaee01d27c9e45a Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 07:15:21 -0600 Subject: [PATCH 170/216] lumina: Fix packaging errors --- pkgs/desktops/lumina/default.nix | 18 +++++++++--------- pkgs/top-level/all-packages.nix | 2 +- 2 files changed, 10 insertions(+), 10 deletions(-) diff --git a/pkgs/desktops/lumina/default.nix b/pkgs/desktops/lumina/default.nix index f593bd14437..2c80f5157b6 100644 --- a/pkgs/desktops/lumina/default.nix +++ b/pkgs/desktops/lumina/default.nix @@ -1,5 +1,5 @@ -{ stdenv, fetchFromGitHub, fluxbox, xscreensaver, desktop_file_utils, - numlockx, xorg, qt5, kde5 +{ stdenv, fetchFromGitHub, fluxbox, xscreensaver, desktop_file_utils, numlockx, + xorg, qtbase, qtsvg, qtmultimedia, qtx11extras, qmakeHook, qttools, oxygen-icons5 }: stdenv.mkDerivation rec { @@ -14,19 +14,19 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - qt5.qmakeHook - qt5.qttools + qmakeHook + qttools ]; buildInputs = [ xorg.libxcb xorg.xcbutilwm xorg.xcbutilimage - qt5.qtbase - qt5.qtsvg - qt5.qtmultimedia - qt5.qtx11extras - kde5.oxygen-icons5 + qtbase + qtsvg + qtmultimedia + qtx11extras + oxygen-icons5 fluxbox xscreensaver desktop_file_utils diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 7395a60bf8b..28bfd94d119 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -16779,7 +16779,7 @@ with pkgs; ); in recurseIntoAttrs self; - lumina = callPackage ../desktops/lumina { }; + lumina = qt5.callPackage ../desktops/lumina { }; lxqt = recurseIntoAttrs (import ../desktops/lxqt { inherit pkgs libsForQt5 fetchFromGitHub; From 8eb4d2afbc1d61d316073f25f5885a46ccb37ea2 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 12:25:44 -0600 Subject: [PATCH 171/216] Remove top-level kde5 attribute - There is no such thing as KDE 5 --- nixos/modules/i18n/input-method/ibus.nix | 2 +- .../cd-dvd/installation-cd-graphical-kde.nix | 2 +- nixos/modules/security/pam.nix | 8 +- .../services/x11/desktop-managers/kde5.nix | 245 ++++++++---------- .../services/x11/desktop-managers/lumina.nix | 4 +- pkgs/applications/audio/i-score/default.nix | 4 +- .../misc/redshift-plasma-applet/default.nix | 4 +- pkgs/desktops/kde-5/applications/default.nix | 27 +- pkgs/desktops/kde-5/plasma/default.nix | 18 +- .../libraries/kde-frameworks/default.nix | 2 +- pkgs/top-level/all-packages.nix | 65 +++-- 11 files changed, 189 insertions(+), 192 deletions(-) diff --git a/nixos/modules/i18n/input-method/ibus.nix b/nixos/modules/i18n/input-method/ibus.nix index a5bbe6bcb55..f8e021f551e 100644 --- a/nixos/modules/i18n/input-method/ibus.nix +++ b/nixos/modules/i18n/input-method/ibus.nix @@ -44,7 +44,7 @@ in panel = mkOption { type = with types; nullOr path; default = null; - example = literalExample "''${pkgs.kde5.plasma-desktop}/lib/libexec/kimpanel-ibus-panel"; + example = literalExample "''${pkgs.plasma5.plasma-desktop}/lib/libexec/kimpanel-ibus-panel"; description = "Replace the IBus panel with another panel."; }; }; diff --git a/nixos/modules/installer/cd-dvd/installation-cd-graphical-kde.nix b/nixos/modules/installer/cd-dvd/installation-cd-graphical-kde.nix index c44dff3bb60..b15aef88536 100644 --- a/nixos/modules/installer/cd-dvd/installation-cd-graphical-kde.nix +++ b/nixos/modules/installer/cd-dvd/installation-cd-graphical-kde.nix @@ -66,7 +66,7 @@ with lib; in '' mkdir -p /root/Desktop ln -sfT ${desktopFile} /root/Desktop/nixos-manual.desktop - ln -sfT ${pkgs.kde5.konsole}/share/applications/org.kde.konsole.desktop /root/Desktop/org.kde.konsole.desktop + ln -sfT ${pkgs.kdeApplications.konsole}/share/applications/org.kde.konsole.desktop /root/Desktop/org.kde.konsole.desktop ln -sfT ${pkgs.gparted}/share/applications/gparted.desktop /root/Desktop/gparted.desktop ''; diff --git a/nixos/modules/security/pam.nix b/nixos/modules/security/pam.nix index b51c8b4996b..5632500df2e 100644 --- a/nixos/modules/security/pam.nix +++ b/nixos/modules/security/pam.nix @@ -280,8 +280,8 @@ let ${optionalString cfg.pamMount "auth optional ${pkgs.pam_mount}/lib/security/pam_mount.so"} ${optionalString cfg.enableKwallet - ("auth optional ${pkgs.kde5.kwallet-pam}/lib/security/pam_kwallet5.so" + - " kwalletd=${pkgs.kde5.kwallet}/bin/kwalletd5")} + ("auth optional ${pkgs.plasma5.kwallet-pam}/lib/security/pam_kwallet5.so" + + " kwalletd=${pkgs.libsForQt5.kwallet}/bin/kwalletd5")} '') + '' ${optionalString cfg.unixAuth "auth sufficient pam_unix.so ${optionalString cfg.allowNullPassword "nullok"} likeauth try_first_pass"} @@ -349,8 +349,8 @@ let ${optionalString (cfg.enableAppArmor && config.security.apparmor.enable) "session optional ${pkgs.apparmor-pam}/lib/security/pam_apparmor.so order=user,group,default debug"} ${optionalString (cfg.enableKwallet) - ("session optional ${pkgs.kde5.kwallet-pam}/lib/security/pam_kwallet5.so" + - " kwalletd=${pkgs.kde5.kwallet}/bin/kwalletd5")} + ("session optional ${pkgs.plasma5.kwallet-pam}/lib/security/pam_kwallet5.so" + + " kwalletd=${pkgs.libsForQt5.kwallet}/bin/kwalletd5")} ''); }; diff --git a/nixos/modules/services/x11/desktop-managers/kde5.nix b/nixos/modules/services/x11/desktop-managers/kde5.nix index 12408abd20a..57924a73949 100644 --- a/nixos/modules/services/x11/desktop-managers/kde5.nix +++ b/nixos/modules/services/x11/desktop-managers/kde5.nix @@ -6,9 +6,8 @@ let xcfg = config.services.xserver; cfg = xcfg.desktopManager.kde5; - xorg = pkgs.xorg; - kde5 = pkgs.kde5; + inherit (pkgs) kdeApplications plasma5 libsForQt5 qt5 xorg; in @@ -46,12 +45,12 @@ in config = mkMerge [ (mkIf (cfg.extraPackages != []) { - environment.systemPackages = [ (kde5.kdeWrapper cfg.extraPackages) ]; + environment.systemPackages = [ (libsForQt5.kdeWrapper cfg.extraPackages) ]; }) (mkIf (xcfg.enable && cfg.enable) { services.xserver.desktopManager.session = singleton { - name = "kde5"; + name = "Plasma 5"; bgSupport = true; start = '' # Load PulseAudio module for routing support. @@ -60,128 +59,118 @@ in ${getBin config.hardware.pulseaudio.package}/bin/pactl load-module module-device-manager "do_routing=1" ''} - exec "${kde5.startkde}" + exec "${plasma5.startkde}" ''; }; security.wrappers = { - kcheckpass.source = "${kde5.plasma-workspace.out}/lib/libexec/kcheckpass"; - "start_kdeinit".source = "${kde5.kinit.out}/lib/libexec/kf5/start_kdeinit"; + kcheckpass.source = "${plasma5.plasma-workspace.out}/lib/libexec/kcheckpass"; + "start_kdeinit".source = "${libsForQt5.kinit.out}/lib/libexec/kf5/start_kdeinit"; }; - environment.systemPackages = + environment.systemPackages = with qt5; with libsForQt5; with plasma5; with kdeApplications; [ - kde5.frameworkintegration - kde5.kactivities - kde5.kauth - kde5.kcmutils - kde5.kconfig - kde5.kconfigwidgets - kde5.kcoreaddons - kde5.kdbusaddons - kde5.kdeclarative - kde5.kded - kde5.kdesu - kde5.kdnssd - kde5.kemoticons - kde5.kfilemetadata - kde5.kglobalaccel - kde5.kguiaddons - kde5.kiconthemes - kde5.kidletime - kde5.kimageformats - kde5.kinit - kde5.kio - kde5.kjobwidgets - kde5.knewstuff - kde5.knotifications - kde5.knotifyconfig - kde5.kpackage - kde5.kparts - kde5.kpeople - kde5.krunner - kde5.kservice - kde5.ktextwidgets - kde5.kwallet - kde5.kwallet-pam - kde5.kwalletmanager - kde5.kwayland - kde5.kwidgetsaddons - kde5.kxmlgui - kde5.kxmlrpcclient - kde5.plasma-framework - kde5.solid - kde5.sonnet - kde5.threadweaver + frameworkintegration + kactivities + kauth + kcmutils + kconfig + kconfigwidgets + kcoreaddons + kdbusaddons + kdeclarative + kded + kdesu + kdnssd + kemoticons + kfilemetadata + kglobalaccel + kguiaddons + kiconthemes + kidletime + kimageformats + kinit + kio + kjobwidgets + knewstuff + knotifications + knotifyconfig + kpackage + kparts + kpeople + krunner + kservice + ktextwidgets + kwallet + kwallet-pam + kwalletmanager + kwayland + kwidgetsaddons + kxmlgui + kxmlrpcclient + plasma-framework + solid + sonnet + threadweaver - kde5.breeze-qt5 - kde5.kactivitymanagerd - kde5.kde-cli-tools - kde5.kdecoration - kde5.kdeplasma-addons - kde5.kgamma5 - kde5.khotkeys - kde5.kinfocenter - kde5.kmenuedit - kde5.kscreen - kde5.kscreenlocker - kde5.ksysguard - kde5.kwayland - kde5.kwin - kde5.kwrited - kde5.libkscreen - kde5.libksysguard - kde5.milou - kde5.plasma-integration - kde5.polkit-kde-agent - kde5.systemsettings + breeze-qt5 + kactivitymanagerd + kde-cli-tools + kdecoration + kdeplasma-addons + kgamma5 + khotkeys + kinfocenter + kmenuedit + kscreen + kscreenlocker + ksysguard + kwayland + kwin + kwrited + libkscreen + libksysguard + milou + plasma-integration + polkit-kde-agent + systemsettings - kde5.plasma-desktop - kde5.plasma-workspace - kde5.plasma-workspace-wallpapers + plasma-desktop + plasma-workspace + plasma-workspace-wallpapers - kde5.dolphin-plugins - kde5.ffmpegthumbs - kde5.kdegraphics-thumbnailers - kde5.kio-extras - kde5.print-manager + dolphin-plugins + ffmpegthumbs + kdegraphics-thumbnailers + kio-extras + print-manager - # Install Breeze icons if available - (kde5.breeze-icons or kde5.oxygen-icons5 or kde5.oxygen-icons) + breeze-icons pkgs.hicolor_icon_theme - kde5.kde-gtk-config kde5.breeze-gtk + kde-gtk-config breeze-gtk - pkgs.qt5.phonon-backend-gstreamer + phonon-backend-gstreamer ] - # Plasma 5.5 and later has a Breeze GTK theme. - # If it is not available, Orion is very similar to Breeze. - ++ lib.optional (!(lib.hasAttr "breeze-gtk" kde5)) pkgs.orion - - # Install activity manager if available - ++ lib.optional (lib.hasAttr "kactivitymanagerd" kde5) kde5.kactivitymanagerd - - # frameworkintegration was split with plasma-integration in Plasma 5.6 - ++ lib.optional (lib.hasAttr "plasma-integration" kde5) kde5.plasma-integration - - ++ lib.optionals cfg.enableQt4Support [ kde5.breeze-qt4 pkgs.phonon-backend-gstreamer ] + ++ lib.optionals cfg.enableQt4Support [ breeze-qt4 pkgs.phonon-backend-gstreamer ] # Optional hardware support features - ++ lib.optional config.hardware.bluetooth.enable kde5.bluedevil - ++ lib.optional config.networking.networkmanager.enable kde5.plasma-nm - ++ lib.optional config.hardware.pulseaudio.enable kde5.plasma-pa - ++ lib.optional config.powerManagement.enable kde5.powerdevil - ++ lib.optional config.services.colord.enable pkgs.colord-kde - ++ lib.optionals config.services.samba.enable [ kde5.kdenetwork-filesharing pkgs.samba ]; + ++ lib.optional config.hardware.bluetooth.enable bluedevil + ++ lib.optional config.networking.networkmanager.enable plasma-nm + ++ lib.optional config.hardware.pulseaudio.enable plasma-pa + ++ lib.optional config.powerManagement.enable powerdevil + ++ lib.optional config.services.colord.enable colord-kde + ++ lib.optionals config.services.samba.enable [ kdenetwork-filesharing pkgs.samba ]; services.xserver.desktopManager.kde5.extraPackages = + with kdeApplications; with plasma5; [ - kde5.khelpcenter - kde5.oxygen + khelpcenter + oxygen - kde5.dolphin - kde5.konsole + dolphin + konsole ]; environment.pathsToLink = [ "/share" ]; @@ -191,30 +180,24 @@ in target = "X11/xkb"; }; - environment.variables = - { - # Enable GTK applications to load SVG icons - GST_PLUGIN_SYSTEM_PATH_1_0 = - lib.makeSearchPath "/lib/gstreamer-1.0" - (builtins.map (pkg: pkg.out) (with pkgs.gst_all_1; [ - gstreamer - gst-plugins-base - gst-plugins-good - gst-plugins-ugly - gst-plugins-bad - gst-libav # for mp3 playback - ])); - } - // (if (lib.hasAttr "breeze-icons" kde5) - then { GDK_PIXBUF_MODULE_FILE = "${pkgs.librsvg.out}/lib/gdk-pixbuf-2.0/2.10.0/loaders.cache"; } - else { }); + environment.variables = { + # Enable GTK applications to load SVG icons + GST_PLUGIN_SYSTEM_PATH_1_0 = + lib.makeSearchPath "/lib/gstreamer-1.0" + (builtins.map (pkg: pkg.out) (with pkgs.gst_all_1; [ + gstreamer + gst-plugins-base + gst-plugins-good + gst-plugins-ugly + gst-plugins-bad + gst-libav # for mp3 playback + ])); + GDK_PIXBUF_MODULE_FILE = "${pkgs.librsvg.out}/lib/gdk-pixbuf-2.0/2.10.0/loaders.cache"; + }; - fonts.fonts = [ - (kde5.oxygen-fonts or pkgs.noto-fonts) - pkgs.hack-font - ]; + fonts.fonts = with pkgs; [ noto-fonts hack-font ]; - programs.ssh.askPassword = "${kde5.ksshaskpass.out}/bin/ksshaskpass"; + programs.ssh.askPassword = "${plasma5.ksshaskpass.out}/bin/ksshaskpass"; # Enable helpful DBus services. services.udisks2.enable = true; @@ -230,10 +213,10 @@ in services.xserver.displayManager.sddm = { theme = "breeze"; - themes = [ - kde5.ecm # for the setup-hook - kde5.plasma-workspace - kde5.breeze-icons + themes = with libsForQt5; with plasma5; [ + ecm # for the setup-hook + plasma-workspace + breeze-icons ]; }; @@ -250,7 +233,7 @@ in # use kimpanel as the default IBus panel i18n.inputMethod.ibus.panel = lib.mkDefault - "${pkgs.kde5.plasma-desktop}/lib/libexec/kimpanel-ibus-panel"; + "${plasma5.plasma-desktop}/lib/libexec/kimpanel-ibus-panel"; }) ]; diff --git a/nixos/modules/services/x11/desktop-managers/lumina.nix b/nixos/modules/services/x11/desktop-managers/lumina.nix index f0b31a2acb0..ed5ad4a2a00 100644 --- a/nixos/modules/services/x11/desktop-managers/lumina.nix +++ b/nixos/modules/services/x11/desktop-managers/lumina.nix @@ -32,8 +32,8 @@ in environment.systemPackages = [ pkgs.fluxbox - pkgs.kde5.kwindowsystem - pkgs.kde5.oxygen-icons5 + pkgs.qt5.kwindowsystem + pkgs.qt5.oxygen-icons5 pkgs.lumina pkgs.numlockx pkgs.qt5.qtsvg diff --git a/pkgs/applications/audio/i-score/default.nix b/pkgs/applications/audio/i-score/default.nix index e3ebc5fde08..1a47b74e21c 100644 --- a/pkgs/applications/audio/i-score/default.nix +++ b/pkgs/applications/audio/i-score/default.nix @@ -6,7 +6,7 @@ gcc, ginac, jamomacore, - kde5, + kdnssd, libsndfile, ninja, portaudio, @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { ginac gcc jamomacore - kde5.kdnssd + kdnssd libsndfile ninja portaudio diff --git a/pkgs/applications/misc/redshift-plasma-applet/default.nix b/pkgs/applications/misc/redshift-plasma-applet/default.nix index 3cf6f7d754b..fe09f7ff16e 100644 --- a/pkgs/applications/misc/redshift-plasma-applet/default.nix +++ b/pkgs/applications/misc/redshift-plasma-applet/default.nix @@ -1,4 +1,4 @@ -{ stdenv, cmake, kde5, redshift, fetchFromGitHub, ... }: +{ stdenv, cmake, plasma-framework, redshift, fetchFromGitHub, }: let version = "1.0.17"; in @@ -26,7 +26,7 @@ stdenv.mkDerivation { buildInputs = [ cmake - kde5.plasma-framework + plasma-framework ]; diff --git a/pkgs/desktops/kde-5/applications/default.nix b/pkgs/desktops/kde-5/applications/default.nix index 3284b2709c8..a53bbedc2c5 100644 --- a/pkgs/desktops/kde-5/applications/default.nix +++ b/pkgs/desktops/kde-5/applications/default.nix @@ -20,31 +20,34 @@ still shows most of the available features is in `./gwenview.nix`. 1. Update the URL in `./fetch.sh`. 2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/kde-5/applications` from the top of the Nixpkgs tree. -3. Invoke `nix-build -A kde5` and ensure that everything builds. +3. Use `nox-review wip` to check that everything builds. 4. Commit the changes and open a pull request. */ -{ pkgs, debug ? false }: +{ + stdenv, lib, libsForQt5, fetchurl, + plasma5, + attica, phonon, + debug ? false, +}: let - inherit (pkgs) lib stdenv; - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit (pkgs) fetchurl; inherit mirror; }; + srcs = import ./srcs.nix { inherit fetchurl mirror; }; packages = self: with self; { kdeApp = import ./kde-app.nix { inherit lib; inherit debug srcs; - inherit kdeDerivation; + inherit (libsForQt5) kdeDerivation; }; kdelibs = callPackage ./kdelibs { inherit (srcs.kdelibs) src version; - inherit (pkgs) attica phonon; + inherit attica phonon; }; akonadi = callPackage ./akonadi.nix {}; @@ -54,9 +57,7 @@ let baloo-widgets = callPackage ./baloo-widgets.nix {}; dolphin = callPackage ./dolphin.nix {}; dolphin-plugins = callPackage ./dolphin-plugins.nix {}; - ffmpegthumbs = callPackage ./ffmpegthumbs.nix { - ffmpeg = pkgs.ffmpeg_2; - }; + ffmpegthumbs = callPackage ./ffmpegthumbs.nix { }; filelight = callPackage ./filelight.nix {}; gwenview = callPackage ./gwenview.nix {}; kate = callPackage ./kate.nix {}; @@ -85,9 +86,11 @@ let okteta = callPackage ./okteta.nix {}; okular = callPackage ./okular.nix {}; print-manager = callPackage ./print-manager.nix {}; - spectacle = callPackage ./spectacle.nix {}; + spectacle = callPackage ./spectacle.nix { + inherit (plasma5) kscreen; + }; l10n = pkgs.recurseIntoAttrs (import ./l10n.nix { inherit callPackage lib pkgs; }); }; -in packages +in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/desktops/kde-5/plasma/default.nix b/pkgs/desktops/kde-5/plasma/default.nix index 3ac1c51848e..e42a543ea23 100644 --- a/pkgs/desktops/kde-5/plasma/default.nix +++ b/pkgs/desktops/kde-5/plasma/default.nix @@ -19,19 +19,21 @@ existing packages here and modify it as necessary. 1. Update the URL in `./fetch.sh`. 2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/kde-5/plasma` from the top of the Nixpkgs tree. -3. Invoke `nix-build -A kde5` and ensure that everything builds. +3. Use `nox-review wip` to check that everything builds. 4. Commit the changes and open a pull request. */ -{ pkgs, debug ? false }: +{ + stdenv, lib, libsForQt5, makeSetupHook, symlinkJoin, fetchurl, + gconf, + debug ? false, +}: let - inherit (pkgs) lib makeSetupHook stdenv symlinkJoin; - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit (pkgs) fetchurl; inherit mirror; }; + srcs = import ./srcs.nix { inherit fetchurl mirror; }; packages = self: with self; { plasmaPackage = args: @@ -39,7 +41,7 @@ let inherit (args) name; sname = args.sname or name; inherit (srcs."${sname}") src version; - in kdeDerivation (args // { + in libsForQt5.kdeDerivation (args // { name = "${name}-${version}"; inherit src; @@ -86,7 +88,7 @@ let plasma-integration = callPackage ./plasma-integration.nix {}; plasma-nm = callPackage ./plasma-nm {}; plasma-pa = callPackage ./plasma-pa.nix { - inherit (pkgs.gnome3) gconf; + inherit gconf; }; plasma-workspace = callPackage ./plasma-workspace {}; plasma-workspace-wallpapers = callPackage ./plasma-workspace-wallpapers.nix {}; @@ -96,4 +98,4 @@ let systemsettings = callPackage ./systemsettings.nix {}; }; -in packages +in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index ac6b319a0dd..a4e64aaee41 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -19,7 +19,7 @@ existing packages here and modify it as necessary. 1. Update the URL in `./fetch.sh`. 2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/development/libraries/kde-frameworks` from the top of the Nixpkgs tree. -3. Invoke `nix-build -A kde5` and ensure that everything builds. +3. Use `nox-review wip` to check that everything builds. 4. Commit the changes and open a pull request. */ diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 28bfd94d119..27f6dce1cde 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -7846,7 +7846,7 @@ with pkgs; judy = callPackage ../development/libraries/judy { }; - kdelibs4 = kde5.applications.kdelibs; + kdelibs4 = kdeApplications.kdelibs; keybinder = callPackage ../development/libraries/keybinder { automake = automake111x; @@ -12791,7 +12791,7 @@ with pkgs; calligra = kde4.callPackage ../applications/office/calligra { vc = vc_0_7; - oxygen_icons = kde5.oxygen-icons5; + oxygen_icons = libsForQt5.oxygen-icons5; }; camlistore = callPackage ../applications/misc/camlistore { }; @@ -14048,17 +14048,29 @@ with pkgs; kde-telepathy = kde4.callPackage ../applications/networking/instant-messengers/telepathy/kde {}; + kdeApplications = import ../desktops/kde-5/applications { + inherit stdenv lib libsForQt5 fetchurl; + inherit plasma5; + inherit attica phonon; + }; + kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; - kdecoration-viewer = kde5.callPackage ../tools/misc/kdecoration-viewer {}; + kdecoration-viewer = libsForQt5.callPackage ../tools/misc/kdecoration-viewer { + inherit (plasma5) kdecoration; + }; - kdevelop-pg-qt = kde5.callPackage ../applications/editors/kdevelop5/kdevelop-pg-qt.nix {}; + kdevelop-pg-qt = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevelop-pg-qt.nix {}; - kdevelop = kde5.callPackage ../applications/editors/kdevelop5/kdevelop.nix { + kdevelop = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevelop.nix { + inherit (kdeApplications) konsole; + inherit (plasma5) libksysguard; llvmPackages = llvmPackages_38; }; - kdevplatform = kde5.callPackage ../applications/editors/kdevelop5/kdevplatform.nix {}; + kdevplatform = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevplatform.nix { + inherit (kdeApplications) libkomparediff2; + }; keepnote = callPackage ../applications/office/keepnote { }; @@ -14080,14 +14092,18 @@ with pkgs; qt = qt4; }; - kile = kde5.callPackage ../applications/editors/kile { }; + kile = libsForQt5.callPackage ../applications/editors/kile { + inherit (kdeApplications) konsole; + }; kino = callPackage ../applications/video/kino { inherit (gnome2) libglade; ffmpeg = ffmpeg_2; }; - kipi-plugins = kde5.callPackage ../applications/graphics/kipi-plugins {}; + kipi-plugins = libsForQt5.callPackage ../applications/graphics/kipi-plugins { + inherit (kdeApplications) libkipi; + }; kiwix = callPackage ../applications/misc/kiwix { stdenv = overrideCC stdenv gcc49; @@ -16050,7 +16066,9 @@ with pkgs; yabar = callPackage ../applications/window-managers/yabar { }; - yakuake = kde5.callPackage ../applications/misc/yakuake {}; + yakuake = libsForQt5.callPackage ../applications/misc/yakuake { + inherit (kdeApplications) konsole; + }; yarp = callPackage ../applications/science/robotics/yarp {}; @@ -16210,7 +16228,9 @@ with pkgs; dhewm3 = callPackage ../games/dhewm3 {}; - digikam = kde5.callPackage ../applications/graphics/digikam { + digikam = libsForQt5.callPackage ../applications/graphics/digikam { + inherit (kdeApplications) libkipi marble; + inherit (plasma5) oxygen; boost = boost160; }; @@ -16779,7 +16799,7 @@ with pkgs; ); in recurseIntoAttrs self; - lumina = qt5.callPackage ../desktops/lumina { }; + lumina = libsForQt5.callPackage ../desktops/lumina { }; lxqt = recurseIntoAttrs (import ../desktops/lxqt { inherit pkgs libsForQt5 fetchFromGitHub; @@ -16795,11 +16815,16 @@ with pkgs; pantheon-terminal = callPackage ../desktops/pantheon/apps/pantheon-terminal { }; }; + plasma5 = import ../desktops/kde-5/plasma { + inherit stdenv lib libsForQt5 makeSetupHook symlinkJoin fetchurl; + inherit (gnome3) gconf; + }; + redshift = callPackage ../applications/misc/redshift { inherit (python3Packages) python pygobject3 pyxdg; }; - redshift-plasma-applet = callPackage ../applications/misc/redshift-plasma-applet { }; + redshift-plasma-applet = libsForQt5.callPackage ../applications/misc/redshift-plasma-applet { }; orion = callPackage ../misc/themes/orion {}; @@ -16813,22 +16838,6 @@ with pkgs; numix-gtk-theme = callPackage ../misc/themes/numix { }; - kde5 = - let - plasma = import ../desktops/kde-5/plasma { inherit pkgs; }; - applications = import ../desktops/kde-5/applications { inherit pkgs; }; - merged = self: - { - plasma = plasma self; - frameworks = libsForQt5.kdeFrameworks; - applications = applications self; - } - // libsForQt5.kdeFrameworks - // plasma self - // applications self; - in - recurseIntoAttrs (lib.makeScope libsForQt5.newScope merged); - theme-vertex = callPackage ../misc/themes/vertex { }; rox-filer = callPackage ../desktops/rox/rox-filer { From 7f84ad5f4c4a2aac98ebb2f4a37a02915e357939 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 13:35:00 -0600 Subject: [PATCH 172/216] plasma5: Move to desktops/plasma-5 --- pkgs/desktops/{kde-5/plasma => plasma-5}/bluedevil.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-grub.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-gtk.nix | 0 .../{kde-5/plasma => plasma-5}/breeze-plymouth/default.nix | 0 .../plasma => plasma-5}/breeze-plymouth/install-paths.patch | 0 .../{kde-5/plasma => plasma-5}/breeze-plymouth/series | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-qt4.nix | 4 ++-- pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-qt5.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/default.nix | 2 +- pkgs/desktops/{kde-5/plasma => plasma-5}/fetch.sh | 0 .../desktops/{kde-5/plasma => plasma-5}/kactivitymanagerd.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kde-cli-tools.nix | 0 .../kde-gtk-config/0001-follow-symlinks.patch | 0 .../{kde-5/plasma => plasma-5}/kde-gtk-config/default.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kdecoration.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kdeplasma-addons.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kgamma5.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/khotkeys.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kinfocenter.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kmenuedit.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kscreen.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kscreenlocker.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/ksshaskpass.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/ksysguard.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kwallet-pam.nix | 0 .../{kde-5/plasma => plasma-5}/kwayland-integration.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/default.nix | 0 .../{kde-5/plasma => plasma-5}/kwin/follow-symlinks.patch | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/series | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/xwayland.patch | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/kwrited.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/libkscreen.nix | 0 .../libksysguard/0001-qdiriterator-follow-symlinks.patch | 0 .../{kde-5/plasma => plasma-5}/libksysguard/default.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/milou.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/oxygen.nix | 0 .../{kde-5/plasma => plasma-5}/plasma-desktop/default.nix | 0 .../plasma => plasma-5}/plasma-desktop/hwclock-path.patch | 0 .../{kde-5/plasma => plasma-5}/plasma-desktop/ibus.patch | 0 .../plasma => plasma-5}/plasma-desktop/qml-import-paths.patch | 0 .../desktops/{kde-5/plasma => plasma-5}/plasma-desktop/series | 0 .../{kde-5/plasma => plasma-5}/plasma-desktop/tzdir.patch | 0 .../{kde-5/plasma => plasma-5}/plasma-integration.nix | 0 .../plasma-nm/0001-mobile-broadband-provider-info-path.patch | 0 .../desktops/{kde-5/plasma => plasma-5}/plasma-nm/default.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-pa.nix | 0 .../plasma => plasma-5}/plasma-workspace-wallpapers.nix | 0 .../{kde-5/plasma => plasma-5}/plasma-workspace/default.nix | 0 .../plasma-workspace/qml-import-path.patch | 0 .../{kde-5/plasma => plasma-5}/plasma-workspace/series | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/polkit-kde-agent.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/powerdevil.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/srcs.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/startkde/default.nix | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/startkde/startkde.sh | 0 pkgs/desktops/{kde-5/plasma => plasma-5}/systemsettings.nix | 0 pkgs/top-level/all-packages.nix | 2 +- 57 files changed, 4 insertions(+), 4 deletions(-) rename pkgs/desktops/{kde-5/plasma => plasma-5}/bluedevil.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-grub.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-gtk.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-plymouth/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-plymouth/install-paths.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-plymouth/series (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-qt4.nix (89%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/breeze-qt5.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/default.nix (97%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/fetch.sh (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kactivitymanagerd.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kde-cli-tools.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kde-gtk-config/0001-follow-symlinks.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kde-gtk-config/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kdecoration.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kdeplasma-addons.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kgamma5.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/khotkeys.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kinfocenter.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kmenuedit.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kscreen.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kscreenlocker.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/ksshaskpass.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/ksysguard.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwallet-pam.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwayland-integration.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/follow-symlinks.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/series (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwin/xwayland.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/kwrited.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/libkscreen.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/libksysguard/0001-qdiriterator-follow-symlinks.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/libksysguard/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/milou.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/oxygen.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/hwclock-path.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/ibus.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/qml-import-paths.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/series (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-desktop/tzdir.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-integration.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-nm/0001-mobile-broadband-provider-info-path.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-nm/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-pa.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-workspace-wallpapers.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-workspace/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-workspace/qml-import-path.patch (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/plasma-workspace/series (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/polkit-kde-agent.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/powerdevil.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/srcs.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/startkde/default.nix (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/startkde/startkde.sh (100%) rename pkgs/desktops/{kde-5/plasma => plasma-5}/systemsettings.nix (100%) diff --git a/pkgs/desktops/kde-5/plasma/bluedevil.nix b/pkgs/desktops/plasma-5/bluedevil.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/bluedevil.nix rename to pkgs/desktops/plasma-5/bluedevil.nix diff --git a/pkgs/desktops/kde-5/plasma/breeze-grub.nix b/pkgs/desktops/plasma-5/breeze-grub.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-grub.nix rename to pkgs/desktops/plasma-5/breeze-grub.nix diff --git a/pkgs/desktops/kde-5/plasma/breeze-gtk.nix b/pkgs/desktops/plasma-5/breeze-gtk.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-gtk.nix rename to pkgs/desktops/plasma-5/breeze-gtk.nix diff --git a/pkgs/desktops/kde-5/plasma/breeze-plymouth/default.nix b/pkgs/desktops/plasma-5/breeze-plymouth/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-plymouth/default.nix rename to pkgs/desktops/plasma-5/breeze-plymouth/default.nix diff --git a/pkgs/desktops/kde-5/plasma/breeze-plymouth/install-paths.patch b/pkgs/desktops/plasma-5/breeze-plymouth/install-paths.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-plymouth/install-paths.patch rename to pkgs/desktops/plasma-5/breeze-plymouth/install-paths.patch diff --git a/pkgs/desktops/kde-5/plasma/breeze-plymouth/series b/pkgs/desktops/plasma-5/breeze-plymouth/series similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-plymouth/series rename to pkgs/desktops/plasma-5/breeze-plymouth/series diff --git a/pkgs/desktops/kde-5/plasma/breeze-qt4.nix b/pkgs/desktops/plasma-5/breeze-qt4.nix similarity index 89% rename from pkgs/desktops/kde-5/plasma/breeze-qt4.nix rename to pkgs/desktops/plasma-5/breeze-qt4.nix index ad98a41e81d..b97554cd404 100644 --- a/pkgs/desktops/kde-5/plasma/breeze-qt4.nix +++ b/pkgs/desktops/plasma-5/breeze-qt4.nix @@ -1,7 +1,7 @@ { stdenv, lib, src, version, automoc4, cmake, perl, pkgconfig, - kdelibs, qt4, xproto + kdelibs4, qt4, xproto }: stdenv.mkDerivation { @@ -15,7 +15,7 @@ stdenv.mkDerivation { homepage = "http://www.kde.org"; }; inherit src; - buildInputs = [ kdelibs qt4 xproto ]; + buildInputs = [ kdelibs4 qt4 xproto ]; nativeBuildInputs = [ automoc4 cmake perl pkgconfig ]; cmakeFlags = [ "-DUSE_KDE4=ON" diff --git a/pkgs/desktops/kde-5/plasma/breeze-qt5.nix b/pkgs/desktops/plasma-5/breeze-qt5.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/breeze-qt5.nix rename to pkgs/desktops/plasma-5/breeze-qt5.nix diff --git a/pkgs/desktops/kde-5/plasma/default.nix b/pkgs/desktops/plasma-5/default.nix similarity index 97% rename from pkgs/desktops/kde-5/plasma/default.nix rename to pkgs/desktops/plasma-5/default.nix index e42a543ea23..683154273ae 100644 --- a/pkgs/desktops/kde-5/plasma/default.nix +++ b/pkgs/desktops/plasma-5/default.nix @@ -17,7 +17,7 @@ existing packages here and modify it as necessary. # Updates 1. Update the URL in `./fetch.sh`. -2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/kde-5/plasma` +2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/plasma-5` from the top of the Nixpkgs tree. 3. Use `nox-review wip` to check that everything builds. 4. Commit the changes and open a pull request. diff --git a/pkgs/desktops/kde-5/plasma/fetch.sh b/pkgs/desktops/plasma-5/fetch.sh similarity index 100% rename from pkgs/desktops/kde-5/plasma/fetch.sh rename to pkgs/desktops/plasma-5/fetch.sh diff --git a/pkgs/desktops/kde-5/plasma/kactivitymanagerd.nix b/pkgs/desktops/plasma-5/kactivitymanagerd.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kactivitymanagerd.nix rename to pkgs/desktops/plasma-5/kactivitymanagerd.nix diff --git a/pkgs/desktops/kde-5/plasma/kde-cli-tools.nix b/pkgs/desktops/plasma-5/kde-cli-tools.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kde-cli-tools.nix rename to pkgs/desktops/plasma-5/kde-cli-tools.nix diff --git a/pkgs/desktops/kde-5/plasma/kde-gtk-config/0001-follow-symlinks.patch b/pkgs/desktops/plasma-5/kde-gtk-config/0001-follow-symlinks.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/kde-gtk-config/0001-follow-symlinks.patch rename to pkgs/desktops/plasma-5/kde-gtk-config/0001-follow-symlinks.patch diff --git a/pkgs/desktops/kde-5/plasma/kde-gtk-config/default.nix b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kde-gtk-config/default.nix rename to pkgs/desktops/plasma-5/kde-gtk-config/default.nix diff --git a/pkgs/desktops/kde-5/plasma/kdecoration.nix b/pkgs/desktops/plasma-5/kdecoration.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kdecoration.nix rename to pkgs/desktops/plasma-5/kdecoration.nix diff --git a/pkgs/desktops/kde-5/plasma/kdeplasma-addons.nix b/pkgs/desktops/plasma-5/kdeplasma-addons.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kdeplasma-addons.nix rename to pkgs/desktops/plasma-5/kdeplasma-addons.nix diff --git a/pkgs/desktops/kde-5/plasma/kgamma5.nix b/pkgs/desktops/plasma-5/kgamma5.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kgamma5.nix rename to pkgs/desktops/plasma-5/kgamma5.nix diff --git a/pkgs/desktops/kde-5/plasma/khotkeys.nix b/pkgs/desktops/plasma-5/khotkeys.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/khotkeys.nix rename to pkgs/desktops/plasma-5/khotkeys.nix diff --git a/pkgs/desktops/kde-5/plasma/kinfocenter.nix b/pkgs/desktops/plasma-5/kinfocenter.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kinfocenter.nix rename to pkgs/desktops/plasma-5/kinfocenter.nix diff --git a/pkgs/desktops/kde-5/plasma/kmenuedit.nix b/pkgs/desktops/plasma-5/kmenuedit.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kmenuedit.nix rename to pkgs/desktops/plasma-5/kmenuedit.nix diff --git a/pkgs/desktops/kde-5/plasma/kscreen.nix b/pkgs/desktops/plasma-5/kscreen.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kscreen.nix rename to pkgs/desktops/plasma-5/kscreen.nix diff --git a/pkgs/desktops/kde-5/plasma/kscreenlocker.nix b/pkgs/desktops/plasma-5/kscreenlocker.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kscreenlocker.nix rename to pkgs/desktops/plasma-5/kscreenlocker.nix diff --git a/pkgs/desktops/kde-5/plasma/ksshaskpass.nix b/pkgs/desktops/plasma-5/ksshaskpass.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/ksshaskpass.nix rename to pkgs/desktops/plasma-5/ksshaskpass.nix diff --git a/pkgs/desktops/kde-5/plasma/ksysguard.nix b/pkgs/desktops/plasma-5/ksysguard.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/ksysguard.nix rename to pkgs/desktops/plasma-5/ksysguard.nix diff --git a/pkgs/desktops/kde-5/plasma/kwallet-pam.nix b/pkgs/desktops/plasma-5/kwallet-pam.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwallet-pam.nix rename to pkgs/desktops/plasma-5/kwallet-pam.nix diff --git a/pkgs/desktops/kde-5/plasma/kwayland-integration.nix b/pkgs/desktops/plasma-5/kwayland-integration.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwayland-integration.nix rename to pkgs/desktops/plasma-5/kwayland-integration.nix diff --git a/pkgs/desktops/kde-5/plasma/kwin/default.nix b/pkgs/desktops/plasma-5/kwin/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwin/default.nix rename to pkgs/desktops/plasma-5/kwin/default.nix diff --git a/pkgs/desktops/kde-5/plasma/kwin/follow-symlinks.patch b/pkgs/desktops/plasma-5/kwin/follow-symlinks.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwin/follow-symlinks.patch rename to pkgs/desktops/plasma-5/kwin/follow-symlinks.patch diff --git a/pkgs/desktops/kde-5/plasma/kwin/series b/pkgs/desktops/plasma-5/kwin/series similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwin/series rename to pkgs/desktops/plasma-5/kwin/series diff --git a/pkgs/desktops/kde-5/plasma/kwin/xwayland.patch b/pkgs/desktops/plasma-5/kwin/xwayland.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwin/xwayland.patch rename to pkgs/desktops/plasma-5/kwin/xwayland.patch diff --git a/pkgs/desktops/kde-5/plasma/kwrited.nix b/pkgs/desktops/plasma-5/kwrited.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/kwrited.nix rename to pkgs/desktops/plasma-5/kwrited.nix diff --git a/pkgs/desktops/kde-5/plasma/libkscreen.nix b/pkgs/desktops/plasma-5/libkscreen.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/libkscreen.nix rename to pkgs/desktops/plasma-5/libkscreen.nix diff --git a/pkgs/desktops/kde-5/plasma/libksysguard/0001-qdiriterator-follow-symlinks.patch b/pkgs/desktops/plasma-5/libksysguard/0001-qdiriterator-follow-symlinks.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/libksysguard/0001-qdiriterator-follow-symlinks.patch rename to pkgs/desktops/plasma-5/libksysguard/0001-qdiriterator-follow-symlinks.patch diff --git a/pkgs/desktops/kde-5/plasma/libksysguard/default.nix b/pkgs/desktops/plasma-5/libksysguard/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/libksysguard/default.nix rename to pkgs/desktops/plasma-5/libksysguard/default.nix diff --git a/pkgs/desktops/kde-5/plasma/milou.nix b/pkgs/desktops/plasma-5/milou.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/milou.nix rename to pkgs/desktops/plasma-5/milou.nix diff --git a/pkgs/desktops/kde-5/plasma/oxygen.nix b/pkgs/desktops/plasma-5/oxygen.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/oxygen.nix rename to pkgs/desktops/plasma-5/oxygen.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/default.nix b/pkgs/desktops/plasma-5/plasma-desktop/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/default.nix rename to pkgs/desktops/plasma-5/plasma-desktop/default.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/hwclock-path.patch b/pkgs/desktops/plasma-5/plasma-desktop/hwclock-path.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/hwclock-path.patch rename to pkgs/desktops/plasma-5/plasma-desktop/hwclock-path.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/ibus.patch b/pkgs/desktops/plasma-5/plasma-desktop/ibus.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/ibus.patch rename to pkgs/desktops/plasma-5/plasma-desktop/ibus.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/qml-import-paths.patch b/pkgs/desktops/plasma-5/plasma-desktop/qml-import-paths.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/qml-import-paths.patch rename to pkgs/desktops/plasma-5/plasma-desktop/qml-import-paths.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/series b/pkgs/desktops/plasma-5/plasma-desktop/series similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/series rename to pkgs/desktops/plasma-5/plasma-desktop/series diff --git a/pkgs/desktops/kde-5/plasma/plasma-desktop/tzdir.patch b/pkgs/desktops/plasma-5/plasma-desktop/tzdir.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-desktop/tzdir.patch rename to pkgs/desktops/plasma-5/plasma-desktop/tzdir.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-integration.nix b/pkgs/desktops/plasma-5/plasma-integration.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-integration.nix rename to pkgs/desktops/plasma-5/plasma-integration.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-nm/0001-mobile-broadband-provider-info-path.patch b/pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-nm/0001-mobile-broadband-provider-info-path.patch rename to pkgs/desktops/plasma-5/plasma-nm/0001-mobile-broadband-provider-info-path.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-nm/default.nix b/pkgs/desktops/plasma-5/plasma-nm/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-nm/default.nix rename to pkgs/desktops/plasma-5/plasma-nm/default.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-pa.nix b/pkgs/desktops/plasma-5/plasma-pa.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-pa.nix rename to pkgs/desktops/plasma-5/plasma-pa.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-workspace-wallpapers.nix b/pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-workspace-wallpapers.nix rename to pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-workspace/default.nix b/pkgs/desktops/plasma-5/plasma-workspace/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-workspace/default.nix rename to pkgs/desktops/plasma-5/plasma-workspace/default.nix diff --git a/pkgs/desktops/kde-5/plasma/plasma-workspace/qml-import-path.patch b/pkgs/desktops/plasma-5/plasma-workspace/qml-import-path.patch similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-workspace/qml-import-path.patch rename to pkgs/desktops/plasma-5/plasma-workspace/qml-import-path.patch diff --git a/pkgs/desktops/kde-5/plasma/plasma-workspace/series b/pkgs/desktops/plasma-5/plasma-workspace/series similarity index 100% rename from pkgs/desktops/kde-5/plasma/plasma-workspace/series rename to pkgs/desktops/plasma-5/plasma-workspace/series diff --git a/pkgs/desktops/kde-5/plasma/polkit-kde-agent.nix b/pkgs/desktops/plasma-5/polkit-kde-agent.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/polkit-kde-agent.nix rename to pkgs/desktops/plasma-5/polkit-kde-agent.nix diff --git a/pkgs/desktops/kde-5/plasma/powerdevil.nix b/pkgs/desktops/plasma-5/powerdevil.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/powerdevil.nix rename to pkgs/desktops/plasma-5/powerdevil.nix diff --git a/pkgs/desktops/kde-5/plasma/srcs.nix b/pkgs/desktops/plasma-5/srcs.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/srcs.nix rename to pkgs/desktops/plasma-5/srcs.nix diff --git a/pkgs/desktops/kde-5/plasma/startkde/default.nix b/pkgs/desktops/plasma-5/startkde/default.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/startkde/default.nix rename to pkgs/desktops/plasma-5/startkde/default.nix diff --git a/pkgs/desktops/kde-5/plasma/startkde/startkde.sh b/pkgs/desktops/plasma-5/startkde/startkde.sh similarity index 100% rename from pkgs/desktops/kde-5/plasma/startkde/startkde.sh rename to pkgs/desktops/plasma-5/startkde/startkde.sh diff --git a/pkgs/desktops/kde-5/plasma/systemsettings.nix b/pkgs/desktops/plasma-5/systemsettings.nix similarity index 100% rename from pkgs/desktops/kde-5/plasma/systemsettings.nix rename to pkgs/desktops/plasma-5/systemsettings.nix diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 27f6dce1cde..76bca805052 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -16815,7 +16815,7 @@ with pkgs; pantheon-terminal = callPackage ../desktops/pantheon/apps/pantheon-terminal { }; }; - plasma5 = import ../desktops/kde-5/plasma { + plasma5 = import ../desktops/plasma-5 { inherit stdenv lib libsForQt5 makeSetupHook symlinkJoin fetchurl; inherit (gnome3) gconf; }; From e39a4597ce3eb209b1d3672cc0433785df93db88 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 13:44:57 -0600 Subject: [PATCH 173/216] mkLibsForQt5: remove kdeFrameworks attribute --- .../libraries/kde-frameworks/default.nix | 14 ++++++++------ pkgs/top-level/all-packages.nix | 8 ++++---- 2 files changed, 12 insertions(+), 10 deletions(-) diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index a4e64aaee41..cb73bbddda7 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -24,16 +24,18 @@ existing packages here and modify it as necessary. */ -{ pkgs, debug ? false }: +{ + stdenv, lib, makeSetupHook, makeWrapper, fetchurl, buildEnv, + callPackage, + debug ? false +}: let - inherit (pkgs) lib makeSetupHook stdenv; - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit (pkgs) fetchurl; inherit mirror; }; + srcs = import ./srcs.nix { inherit fetchurl mirror; }; - packages = self: with self; { + packages = rec { kdeDerivation = args: let @@ -69,7 +71,7 @@ let }); kdeWrapper = import ./kde-wrapper.nix { - inherit (pkgs) stdenv lib makeWrapper buildEnv; + inherit stdenv lib makeWrapper buildEnv; }; attica = callPackage ./attica.nix {}; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 76bca805052..bb9f348e87e 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9336,12 +9336,12 @@ with pkgs; qt5ct = libsForQt5.callPackage ../tools/misc/qt5ct { }; mkLibsForQt5 = self: with self; - let kdeFrameworks = - import ../development/libraries/kde-frameworks { inherit pkgs; } self; + let kdeFrameworks = import ../development/libraries/kde-frameworks { + inherit stdenv lib makeSetupHook makeWrapper fetchurl buildEnv; + inherit (self) callPackage; + }; in { - inherit kdeFrameworks; - accounts-qt = callPackage ../development/libraries/accounts-qt { }; fcitx-qt5 = callPackage ../tools/inputmethods/fcitx/fcitx-qt5.nix { }; From c650dc8bd7b62bcbeb640657a9408f152b278f3e Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 13:47:52 -0600 Subject: [PATCH 174/216] kirigami_2: Do not mix Qt versions! --- pkgs/development/libraries/kirigami/v2.nix | 1 + pkgs/top-level/all-packages.nix | 5 +---- 2 files changed, 2 insertions(+), 4 deletions(-) diff --git a/pkgs/development/libraries/kirigami/v2.nix b/pkgs/development/libraries/kirigami/v2.nix index 8476eebfd50..7dc6e799bcf 100644 --- a/pkgs/development/libraries/kirigami/v2.nix +++ b/pkgs/development/libraries/kirigami/v2.nix @@ -19,5 +19,6 @@ stdenv.mkDerivation rec { homepage = http://www.kde.org; maintainers = with maintainers; [ ttuegel peterhoeg ]; platforms = platforms.unix; + broken = builtins.compareVersions qtbase.version "5.7.0" < 0; }; } diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index bb9f348e87e..c3e02816e49 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9350,10 +9350,7 @@ with pkgs; kirigami_1 = callPackage ../development/libraries/kirigami { }; - kirigami_2 = callPackage ../development/libraries/kirigami/v2.nix { - # kirigami v2 requires qt 5.7 and above - inherit (qt57) qtbase qtquickcontrols2; - }; + kirigami_2 = callPackage ../development/libraries/kirigami/v2.nix { }; kirigami = kirigami_1; From a33ab04d1b7ab4e8df867e8e05cb5b55222d5fe5 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 13:54:09 -0600 Subject: [PATCH 175/216] Clean up KDE Frameworks --- .../libraries/kde-frameworks/default.nix | 12 ++-------- .../extra-cmake-modules/default.nix | 22 ++++--------------- .../extra-cmake-modules/no-hooks.nix | 18 +++++++++++++++ .../{ => extra-cmake-modules}/setup-hook.sh | 0 4 files changed, 24 insertions(+), 28 deletions(-) create mode 100644 pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix rename pkgs/development/libraries/kde-frameworks/{ => extra-cmake-modules}/setup-hook.sh (100%) diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index cb73bbddda7..ffb8fb04078 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -78,16 +78,8 @@ let baloo = callPackage ./baloo.nix {}; bluez-qt = callPackage ./bluez-qt.nix {}; breeze-icons = callPackage ./breeze-icons.nix {}; - # FIXME: this collides with the "ecm" package. - ecm = - let drv = { cmake, ecmNoHooks, pkgconfig, qtbase, qttools }: - makeSetupHook - { deps = lib.chooseDevOutputs [ cmake ecmNoHooks pkgconfig qtbase qttools ]; } - ./setup-hook.sh; - in callPackage drv {}; - ecmNoHooks = callPackage ./extra-cmake-modules { - inherit (srcs.extra-cmake-modules) src version; - }; + ecm = callPackage ./extra-cmake-modules {}; + ecmNoHooks = callPackage ./extra-cmake-modules/no-hooks.nix {}; frameworkintegration = callPackage ./frameworkintegration.nix {}; kactivities = callPackage ./kactivities.nix {}; kactivities-stats = callPackage ./kactivities-stats.nix {}; diff --git a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix index d2f1688e330..6c0919a2361 100644 --- a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix +++ b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix @@ -1,20 +1,6 @@ -{ stdenv, lib, copyPathsToStore, src, version, cmake }: +{ makeSetupHook, lib, cmake, ecmNoHooks, pkgconfig, qtbase, qttools }: -stdenv.mkDerivation { - name = "extra-cmake-modules-${version}"; - - inherit src; - - patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); - - outputs = [ "out" ]; # this package has no runtime components - - nativeBuildInputs = [ cmake ]; - - meta = with lib; { - platforms = lib.platforms.linux; - homepage = "http://www.kde.org"; - license = licenses.bsd2; - maintainers = [ maintainers.ttuegel ]; - }; +makeSetupHook { + deps = lib.chooseDevOutputs [ cmake ecmNoHooks pkgconfig qtbase qttools ]; } +./setup-hook.sh diff --git a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix new file mode 100644 index 00000000000..855d6bdb3d2 --- /dev/null +++ b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix @@ -0,0 +1,18 @@ +{ kdeFramework, lib, copyPathsToStore, cmake }: + +kdeFramework { + name = "extra-cmake-modules"; + + patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); + + outputs = [ "out" ]; # this package has no runtime components + + nativeBuildInputs = [ cmake ]; + + meta = with lib; { + platforms = lib.platforms.linux; + homepage = "http://www.kde.org"; + license = licenses.bsd2; + maintainers = [ maintainers.ttuegel ]; + }; +} diff --git a/pkgs/development/libraries/kde-frameworks/setup-hook.sh b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh similarity index 100% rename from pkgs/development/libraries/kde-frameworks/setup-hook.sh rename to pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh From d446303d0bab3675d1d30fc9a75f17904780c360 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:03:43 -0600 Subject: [PATCH 176/216] Move kdeDerivation out of kdeFrameworks --- pkgs/build-support/kde/derivation.nix | 17 +++++++++++++++++ pkgs/desktops/kde-5/applications/default.nix | 5 ++--- pkgs/desktops/plasma-5/default.nix | 4 ++-- .../libraries/kde-frameworks/default.nix | 18 +----------------- pkgs/top-level/all-packages.nix | 11 +++++++++-- 5 files changed, 31 insertions(+), 24 deletions(-) create mode 100644 pkgs/build-support/kde/derivation.nix diff --git a/pkgs/build-support/kde/derivation.nix b/pkgs/build-support/kde/derivation.nix new file mode 100644 index 00000000000..2e29a0a661e --- /dev/null +++ b/pkgs/build-support/kde/derivation.nix @@ -0,0 +1,17 @@ +{ stdenv, lib, debug ? false }: + +args: + +stdenv.mkDerivation (args // { + + outputs = args.outputs or [ "out" "dev" ]; + + propagatedUserEnvPkgs = + builtins.map lib.getBin (args.propagatedBuildInputs or []); + + cmakeFlags = + (args.cmakeFlags or []) + ++ [ "-DBUILD_TESTING=OFF" ] + ++ lib.optional debug "-DCMAKE_BUILD_TYPE=Debug"; + +}) diff --git a/pkgs/desktops/kde-5/applications/default.nix b/pkgs/desktops/kde-5/applications/default.nix index a53bbedc2c5..832b88c7e80 100644 --- a/pkgs/desktops/kde-5/applications/default.nix +++ b/pkgs/desktops/kde-5/applications/default.nix @@ -27,7 +27,7 @@ still shows most of the available features is in `./gwenview.nix`. { stdenv, lib, libsForQt5, fetchurl, - plasma5, + kdeDerivation, plasma5, attica, phonon, debug ? false, }: @@ -40,9 +40,8 @@ let packages = self: with self; { kdeApp = import ./kde-app.nix { - inherit lib; + inherit lib kdeDerivation; inherit debug srcs; - inherit (libsForQt5) kdeDerivation; }; kdelibs = callPackage ./kdelibs { diff --git a/pkgs/desktops/plasma-5/default.nix b/pkgs/desktops/plasma-5/default.nix index 683154273ae..b240ef7496c 100644 --- a/pkgs/desktops/plasma-5/default.nix +++ b/pkgs/desktops/plasma-5/default.nix @@ -26,7 +26,7 @@ existing packages here and modify it as necessary. { stdenv, lib, libsForQt5, makeSetupHook, symlinkJoin, fetchurl, - gconf, + gconf, kdeDerivation, debug ? false, }: @@ -41,7 +41,7 @@ let inherit (args) name; sname = args.sname or name; inherit (srcs."${sname}") src version; - in libsForQt5.kdeDerivation (args // { + in kdeDerivation (args // { name = "${name}-${version}"; inherit src; diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index ffb8fb04078..1ce3d62cf16 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -26,7 +26,7 @@ existing packages here and modify it as necessary. { stdenv, lib, makeSetupHook, makeWrapper, fetchurl, buildEnv, - callPackage, + kdeDerivation, callPackage, debug ? false }: @@ -37,22 +37,6 @@ let packages = rec { - kdeDerivation = args: - let - in stdenv.mkDerivation (args // { - - outputs = args.outputs or [ "out" "dev" ]; - - propagatedUserEnvPkgs = - builtins.map lib.getBin (args.propagatedBuildInputs or []); - - cmakeFlags = - (args.cmakeFlags or []) - ++ [ "-DBUILD_TESTING=OFF" ] - ++ lib.optional debug "-DCMAKE_BUILD_TYPE=Debug"; - - }); - kdeFramework = args: let inherit (args) name; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index c3e02816e49..7edbbf3b1f7 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -269,6 +269,8 @@ with pkgs; inherit kernel rootModules allowMissing; }; + kdeDerivation = import ../build-support/kde/derivation.nix { inherit stdenv lib; }; + nixBufferBuilders = import ../build-support/emacs/buffer.nix { inherit (pkgs) lib writeText; inherit (emacsPackagesNg) inherit-local; }; pathsFromGraph = ../build-support/kernel/paths-from-graph.pl; @@ -9337,11 +9339,15 @@ with pkgs; mkLibsForQt5 = self: with self; let kdeFrameworks = import ../development/libraries/kde-frameworks { - inherit stdenv lib makeSetupHook makeWrapper fetchurl buildEnv; + inherit stdenv lib kdeDerivation makeSetupHook makeWrapper fetchurl buildEnv; inherit (self) callPackage; }; in { + ### BUILD SUPPORT + + ### LIBRARIES + accounts-qt = callPackage ../development/libraries/accounts-qt { }; fcitx-qt5 = callPackage ../tools/inputmethods/fcitx/fcitx-qt5.nix { }; @@ -14047,7 +14053,7 @@ with pkgs; kdeApplications = import ../desktops/kde-5/applications { inherit stdenv lib libsForQt5 fetchurl; - inherit plasma5; + inherit kdeDerivation plasma5; inherit attica phonon; }; @@ -16814,6 +16820,7 @@ with pkgs; plasma5 = import ../desktops/plasma-5 { inherit stdenv lib libsForQt5 makeSetupHook symlinkJoin fetchurl; + inherit kdeDerivation; inherit (gnome3) gconf; }; From 68e0bc38a2cc09985ef5dde22c200010349ed731 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:05:22 -0600 Subject: [PATCH 177/216] Move kdeWrapper out of kdeFrameworks --- .../kde-wrapper.nix => build-support/kde/wrapper.nix} | 0 pkgs/development/libraries/kde-frameworks/default.nix | 4 ---- pkgs/top-level/all-packages.nix | 4 ++++ 3 files changed, 4 insertions(+), 4 deletions(-) rename pkgs/{development/libraries/kde-frameworks/kde-wrapper.nix => build-support/kde/wrapper.nix} (100%) diff --git a/pkgs/development/libraries/kde-frameworks/kde-wrapper.nix b/pkgs/build-support/kde/wrapper.nix similarity index 100% rename from pkgs/development/libraries/kde-frameworks/kde-wrapper.nix rename to pkgs/build-support/kde/wrapper.nix diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index 1ce3d62cf16..c5484dd6e8d 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -54,10 +54,6 @@ let } // (args.meta or {}); }); - kdeWrapper = import ./kde-wrapper.nix { - inherit stdenv lib makeWrapper buildEnv; - }; - attica = callPackage ./attica.nix {}; baloo = callPackage ./baloo.nix {}; bluez-qt = callPackage ./bluez-qt.nix {}; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 7edbbf3b1f7..15db1a7d7a6 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -271,6 +271,10 @@ with pkgs; kdeDerivation = import ../build-support/kde/derivation.nix { inherit stdenv lib; }; + kdeWrapper = import ../build-support/kde/wrapper.nix { + inherit stdenv lib makeWrapper buildEnv; + }; + nixBufferBuilders = import ../build-support/emacs/buffer.nix { inherit (pkgs) lib writeText; inherit (emacsPackagesNg) inherit-local; }; pathsFromGraph = ../build-support/kernel/paths-from-graph.pl; From fca3f2e661fa659dc9008338b19531ad6d67c17a Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:22:26 -0600 Subject: [PATCH 178/216] kdeFrameworks: Hide internal kdeFramework deriver --- .../build-support/framework.nix | 24 +++ .../libraries/kde-frameworks/default.nix | 184 ++++++++---------- pkgs/top-level/all-packages.nix | 4 +- 3 files changed, 107 insertions(+), 105 deletions(-) create mode 100644 pkgs/development/libraries/kde-frameworks/build-support/framework.nix diff --git a/pkgs/development/libraries/kde-frameworks/build-support/framework.nix b/pkgs/development/libraries/kde-frameworks/build-support/framework.nix new file mode 100644 index 00000000000..5b6f2cc4b26 --- /dev/null +++ b/pkgs/development/libraries/kde-frameworks/build-support/framework.nix @@ -0,0 +1,24 @@ +{ kdeDerivation, lib, fetchurl }: + +let + mirror = "mirror://kde"; + srcs = import ../srcs.nix { inherit fetchurl mirror; }; +in + +args: + +let + inherit (args) name; + inherit (srcs."${name}") src version; +in kdeDerivation (args // { + name = "${name}-${version}"; + inherit src; + + meta = { + license = with lib.licenses; [ + lgpl21Plus lgpl3Plus bsd2 mit gpl2Plus gpl3Plus fdl12 + ]; + platforms = lib.platforms.linux; + homepage = "http://www.kde.org"; + } // (args.meta or {}); +}) diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index c5484dd6e8d..00965bd0a58 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -24,109 +24,87 @@ existing packages here and modify it as necessary. */ -{ - stdenv, lib, makeSetupHook, makeWrapper, fetchurl, buildEnv, - kdeDerivation, callPackage, - debug ? false -}: +{ newScope, kdeDerivation, lib, fetchurl }: let - - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit fetchurl mirror; }; - - packages = rec { - - kdeFramework = args: - let - inherit (args) name; - inherit (srcs."${name}") src version; - in kdeDerivation (args // { - name = "${name}-${version}"; - inherit src; - - meta = { - license = with lib.licenses; [ - lgpl21Plus lgpl3Plus bsd2 mit gpl2Plus gpl3Plus fdl12 - ]; - platforms = lib.platforms.linux; - homepage = "http://www.kde.org"; - } // (args.meta or {}); - }); - - attica = callPackage ./attica.nix {}; - baloo = callPackage ./baloo.nix {}; - bluez-qt = callPackage ./bluez-qt.nix {}; - breeze-icons = callPackage ./breeze-icons.nix {}; - ecm = callPackage ./extra-cmake-modules {}; - ecmNoHooks = callPackage ./extra-cmake-modules/no-hooks.nix {}; - frameworkintegration = callPackage ./frameworkintegration.nix {}; - kactivities = callPackage ./kactivities.nix {}; - kactivities-stats = callPackage ./kactivities-stats.nix {}; - kapidox = callPackage ./kapidox.nix {}; - karchive = callPackage ./karchive.nix {}; - kauth = callPackage ./kauth {}; - kbookmarks = callPackage ./kbookmarks.nix {}; - kcmutils = callPackage ./kcmutils {}; - kcodecs = callPackage ./kcodecs.nix {}; - kcompletion = callPackage ./kcompletion.nix {}; - kconfig = callPackage ./kconfig.nix {}; - kconfigwidgets = callPackage ./kconfigwidgets {}; - kcoreaddons = callPackage ./kcoreaddons.nix {}; - kcrash = callPackage ./kcrash.nix {}; - kdbusaddons = callPackage ./kdbusaddons.nix {}; - kdeclarative = callPackage ./kdeclarative.nix {}; - kded = callPackage ./kded.nix {}; - kdelibs4support = callPackage ./kdelibs4support {}; - kdesignerplugin = callPackage ./kdesignerplugin.nix {}; - kdesu = callPackage ./kdesu.nix {}; - kdnssd = callPackage ./kdnssd.nix {}; - kdoctools = callPackage ./kdoctools {}; - kemoticons = callPackage ./kemoticons.nix {}; - kfilemetadata = callPackage ./kfilemetadata {}; - kglobalaccel = callPackage ./kglobalaccel.nix {}; - kguiaddons = callPackage ./kguiaddons.nix {}; - khtml = callPackage ./khtml.nix {}; - ki18n = callPackage ./ki18n.nix {}; - kiconthemes = callPackage ./kiconthemes {}; - kidletime = callPackage ./kidletime.nix {}; - kimageformats = callPackage ./kimageformats.nix {}; - kinit = callPackage ./kinit {}; - kio = callPackage ./kio {}; - kitemmodels = callPackage ./kitemmodels.nix {}; - kitemviews = callPackage ./kitemviews.nix {}; - kjobwidgets = callPackage ./kjobwidgets.nix {}; - kjs = callPackage ./kjs.nix {}; - kjsembed = callPackage ./kjsembed.nix {}; - kmediaplayer = callPackage ./kmediaplayer.nix {}; - knewstuff = callPackage ./knewstuff.nix {}; - knotifications = callPackage ./knotifications.nix {}; - knotifyconfig = callPackage ./knotifyconfig.nix {}; - kpackage = callPackage ./kpackage {}; - kparts = callPackage ./kparts.nix {}; - kpeople = callPackage ./kpeople.nix {}; - kplotting = callPackage ./kplotting.nix {}; - kpty = callPackage ./kpty.nix {}; - kross = callPackage ./kross.nix {}; - krunner = callPackage ./krunner.nix {}; - kservice = callPackage ./kservice {}; - ktexteditor = callPackage ./ktexteditor.nix {}; - ktextwidgets = callPackage ./ktextwidgets.nix {}; - kunitconversion = callPackage ./kunitconversion.nix {}; - kwallet = callPackage ./kwallet.nix {}; - kwayland = callPackage ./kwayland.nix {}; - kwidgetsaddons = callPackage ./kwidgetsaddons.nix {}; - kwindowsystem = callPackage ./kwindowsystem.nix {}; - kxmlgui = callPackage ./kxmlgui.nix {}; - kxmlrpcclient = callPackage ./kxmlrpcclient.nix {}; - modemmanager-qt = callPackage ./modemmanager-qt.nix {}; - networkmanager-qt = callPackage ./networkmanager-qt.nix {}; - oxygen-icons5 = callPackage ./oxygen-icons5.nix {}; - plasma-framework = callPackage ./plasma-framework.nix {}; - solid = callPackage ./solid.nix {}; - sonnet = callPackage ./sonnet.nix {}; - syntax-highlighting = callPackage ./syntax-highlighting.nix {}; - threadweaver = callPackage ./threadweaver.nix {}; + callPackage = newScope { + kdeFramework = import ./build-support/framework.nix { + inherit kdeDerivation lib fetchurl; + }; }; - -in packages +in +{ + attica = callPackage ./attica.nix {}; + baloo = callPackage ./baloo.nix {}; + bluez-qt = callPackage ./bluez-qt.nix {}; + breeze-icons = callPackage ./breeze-icons.nix {}; + ecm = callPackage ./extra-cmake-modules {}; + ecmNoHooks = callPackage ./extra-cmake-modules/no-hooks.nix { }; + frameworkintegration = callPackage ./frameworkintegration.nix {}; + kactivities = callPackage ./kactivities.nix {}; + kactivities-stats = callPackage ./kactivities-stats.nix {}; + kapidox = callPackage ./kapidox.nix {}; + karchive = callPackage ./karchive.nix {}; + kauth = callPackage ./kauth {}; + kbookmarks = callPackage ./kbookmarks.nix {}; + kcmutils = callPackage ./kcmutils {}; + kcodecs = callPackage ./kcodecs.nix {}; + kcompletion = callPackage ./kcompletion.nix {}; + kconfig = callPackage ./kconfig.nix {}; + kconfigwidgets = callPackage ./kconfigwidgets {}; + kcoreaddons = callPackage ./kcoreaddons.nix {}; + kcrash = callPackage ./kcrash.nix {}; + kdbusaddons = callPackage ./kdbusaddons.nix {}; + kdeclarative = callPackage ./kdeclarative.nix {}; + kded = callPackage ./kded.nix {}; + kdelibs4support = callPackage ./kdelibs4support {}; + kdesignerplugin = callPackage ./kdesignerplugin.nix {}; + kdesu = callPackage ./kdesu.nix {}; + kdnssd = callPackage ./kdnssd.nix {}; + kdoctools = callPackage ./kdoctools {}; + kemoticons = callPackage ./kemoticons.nix {}; + kfilemetadata = callPackage ./kfilemetadata {}; + kglobalaccel = callPackage ./kglobalaccel.nix {}; + kguiaddons = callPackage ./kguiaddons.nix {}; + khtml = callPackage ./khtml.nix {}; + ki18n = callPackage ./ki18n.nix {}; + kiconthemes = callPackage ./kiconthemes {}; + kidletime = callPackage ./kidletime.nix {}; + kimageformats = callPackage ./kimageformats.nix {}; + kinit = callPackage ./kinit {}; + kio = callPackage ./kio {}; + kitemmodels = callPackage ./kitemmodels.nix {}; + kitemviews = callPackage ./kitemviews.nix {}; + kjobwidgets = callPackage ./kjobwidgets.nix {}; + kjs = callPackage ./kjs.nix {}; + kjsembed = callPackage ./kjsembed.nix {}; + kmediaplayer = callPackage ./kmediaplayer.nix {}; + knewstuff = callPackage ./knewstuff.nix {}; + knotifications = callPackage ./knotifications.nix {}; + knotifyconfig = callPackage ./knotifyconfig.nix {}; + kpackage = callPackage ./kpackage {}; + kparts = callPackage ./kparts.nix {}; + kpeople = callPackage ./kpeople.nix {}; + kplotting = callPackage ./kplotting.nix {}; + kpty = callPackage ./kpty.nix {}; + kross = callPackage ./kross.nix {}; + krunner = callPackage ./krunner.nix {}; + kservice = callPackage ./kservice {}; + ktexteditor = callPackage ./ktexteditor.nix {}; + ktextwidgets = callPackage ./ktextwidgets.nix {}; + kunitconversion = callPackage ./kunitconversion.nix {}; + kwallet = callPackage ./kwallet.nix {}; + kwayland = callPackage ./kwayland.nix {}; + kwidgetsaddons = callPackage ./kwidgetsaddons.nix {}; + kwindowsystem = callPackage ./kwindowsystem.nix {}; + kxmlgui = callPackage ./kxmlgui.nix {}; + kxmlrpcclient = callPackage ./kxmlrpcclient.nix {}; + modemmanager-qt = callPackage ./modemmanager-qt.nix {}; + networkmanager-qt = callPackage ./networkmanager-qt.nix {}; + oxygen-icons5 = callPackage ./oxygen-icons5.nix {}; + plasma-framework = callPackage ./plasma-framework.nix {}; + solid = callPackage ./solid.nix {}; + sonnet = callPackage ./sonnet.nix {}; + syntax-highlighting = callPackage ./syntax-highlighting.nix {}; + threadweaver = callPackage ./threadweaver.nix {}; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 15db1a7d7a6..6204602e96a 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9343,8 +9343,8 @@ with pkgs; mkLibsForQt5 = self: with self; let kdeFrameworks = import ../development/libraries/kde-frameworks { - inherit stdenv lib kdeDerivation makeSetupHook makeWrapper fetchurl buildEnv; - inherit (self) callPackage; + inherit (self) newScope; + inherit kdeDerivation lib fetchurl; }; in { From e50ba7041126a5a4fbc81192739e36076010beeb Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:32:46 -0600 Subject: [PATCH 179/216] plasma5: Hide internal plasmaPackage deriver --- pkgs/desktops/plasma-5/breeze-qt4.nix | 16 +-- .../plasma-5/build-support/package.nix | 27 ++++ pkgs/desktops/plasma-5/default.nix | 118 ++++++++---------- pkgs/top-level/all-packages.nix | 7 +- 4 files changed, 83 insertions(+), 85 deletions(-) create mode 100644 pkgs/desktops/plasma-5/build-support/package.nix diff --git a/pkgs/desktops/plasma-5/breeze-qt4.nix b/pkgs/desktops/plasma-5/breeze-qt4.nix index b97554cd404..adcc6110c4d 100644 --- a/pkgs/desktops/plasma-5/breeze-qt4.nix +++ b/pkgs/desktops/plasma-5/breeze-qt4.nix @@ -1,20 +1,12 @@ { - stdenv, lib, src, version, + plasmaPackage, lib, automoc4, cmake, perl, pkgconfig, kdelibs4, qt4, xproto }: -stdenv.mkDerivation { - name = "breeze-qt4-${version}"; - meta = { - license = with lib.licenses; [ - lgpl21Plus lgpl3Plus bsd2 mit gpl2Plus gpl3Plus fdl12 - ]; - platforms = lib.platforms.linux; - maintainers = with lib.maintainers; [ ttuegel ]; - homepage = "http://www.kde.org"; - }; - inherit src; +plasmaPackage { + name = "breeze-qt4"; + sname = "breeze"; buildInputs = [ kdelibs4 qt4 xproto ]; nativeBuildInputs = [ automoc4 cmake perl pkgconfig ]; cmakeFlags = [ diff --git a/pkgs/desktops/plasma-5/build-support/package.nix b/pkgs/desktops/plasma-5/build-support/package.nix new file mode 100644 index 00000000000..1e9ba016c47 --- /dev/null +++ b/pkgs/desktops/plasma-5/build-support/package.nix @@ -0,0 +1,27 @@ +{ kdeDerivation, lib, fetchurl }: + +let + mirror = "mirror://kde"; + srcs = import ../srcs.nix { inherit fetchurl mirror; }; +in + +args: + +let + inherit (args) name; + sname = args.sname or name; + inherit (srcs."${sname}") src version; +in +kdeDerivation (args // { + name = "${name}-${version}"; + inherit src; + + meta = { + license = with lib.licenses; [ + lgpl21Plus lgpl3Plus bsd2 mit gpl2Plus gpl3Plus fdl12 + ]; + platforms = lib.platforms.linux; + maintainers = with lib.maintainers; [ ttuegel ]; + homepage = "http://www.kde.org"; + } // (args.meta or {}); +}) diff --git a/pkgs/desktops/plasma-5/default.nix b/pkgs/desktops/plasma-5/default.nix index b240ef7496c..0cb25a315d6 100644 --- a/pkgs/desktops/plasma-5/default.nix +++ b/pkgs/desktops/plasma-5/default.nix @@ -25,77 +25,57 @@ existing packages here and modify it as necessary. */ { - stdenv, lib, libsForQt5, makeSetupHook, symlinkJoin, fetchurl, - gconf, kdeDerivation, + libsForQt5, kdeDerivation, lib, fetchurl, + gconf, debug ? false, }: let - - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit fetchurl mirror; }; - - packages = self: with self; { - plasmaPackage = args: - let - inherit (args) name; - sname = args.sname or name; - inherit (srcs."${sname}") src version; - in kdeDerivation (args // { - name = "${name}-${version}"; - inherit src; - - meta = { - license = with lib.licenses; [ - lgpl21Plus lgpl3Plus bsd2 mit gpl2Plus gpl3Plus fdl12 - ]; - platforms = lib.platforms.linux; - maintainers = with lib.maintainers; [ ttuegel ]; - homepage = "http://www.kde.org"; - } // (args.meta or {}); - }); - - bluedevil = callPackage ./bluedevil.nix {}; - breeze-gtk = callPackage ./breeze-gtk.nix {}; - breeze-qt4 = callPackage ./breeze-qt4.nix { - inherit (srcs.breeze) src version; + packages = self: with self; + let + callPackage = self.newScope { + plasmaPackage = import ./build-support/package.nix { + inherit kdeDerivation lib fetchurl; + }; + }; + in { + bluedevil = callPackage ./bluedevil.nix {}; + breeze-gtk = callPackage ./breeze-gtk.nix {}; + breeze-qt4 = callPackage ./breeze-qt4.nix {}; + breeze-qt5 = callPackage ./breeze-qt5.nix {}; + breeze-grub = callPackage ./breeze-grub.nix {}; + breeze-plymouth = callPackage ./breeze-plymouth {}; + kactivitymanagerd = callPackage ./kactivitymanagerd.nix {}; + kde-cli-tools = callPackage ./kde-cli-tools.nix {}; + kde-gtk-config = callPackage ./kde-gtk-config {}; + kdecoration = callPackage ./kdecoration.nix {}; + kdeplasma-addons = callPackage ./kdeplasma-addons.nix {}; + kgamma5 = callPackage ./kgamma5.nix {}; + khotkeys = callPackage ./khotkeys.nix {}; + kinfocenter = callPackage ./kinfocenter.nix {}; + kmenuedit = callPackage ./kmenuedit.nix {}; + kscreen = callPackage ./kscreen.nix {}; + kscreenlocker = callPackage ./kscreenlocker.nix {}; + ksshaskpass = callPackage ./ksshaskpass.nix {}; + ksysguard = callPackage ./ksysguard.nix {}; + kwallet-pam = callPackage ./kwallet-pam.nix {}; + kwayland-integration = callPackage ./kwayland-integration.nix {}; + kwin = callPackage ./kwin {}; + kwrited = callPackage ./kwrited.nix {}; + libkscreen = callPackage ./libkscreen.nix {}; + libksysguard = callPackage ./libksysguard {}; + milou = callPackage ./milou.nix {}; + oxygen = callPackage ./oxygen.nix {}; + plasma-desktop = callPackage ./plasma-desktop {}; + plasma-integration = callPackage ./plasma-integration.nix {}; + plasma-nm = callPackage ./plasma-nm {}; + plasma-pa = callPackage ./plasma-pa.nix { inherit gconf; }; + plasma-workspace = callPackage ./plasma-workspace {}; + plasma-workspace-wallpapers = callPackage ./plasma-workspace-wallpapers.nix {}; + polkit-kde-agent = callPackage ./polkit-kde-agent.nix {}; + powerdevil = callPackage ./powerdevil.nix {}; + startkde = callPackage ./startkde {}; + systemsettings = callPackage ./systemsettings.nix {}; }; - breeze-qt5 = callPackage ./breeze-qt5.nix {}; - breeze-grub = callPackage ./breeze-grub.nix {}; - breeze-plymouth = callPackage ./breeze-plymouth {}; - kactivitymanagerd = callPackage ./kactivitymanagerd.nix {}; - kde-cli-tools = callPackage ./kde-cli-tools.nix {}; - kde-gtk-config = callPackage ./kde-gtk-config {}; - kdecoration = callPackage ./kdecoration.nix {}; - kdeplasma-addons = callPackage ./kdeplasma-addons.nix {}; - kgamma5 = callPackage ./kgamma5.nix {}; - khotkeys = callPackage ./khotkeys.nix {}; - kinfocenter = callPackage ./kinfocenter.nix {}; - kmenuedit = callPackage ./kmenuedit.nix {}; - kscreen = callPackage ./kscreen.nix {}; - kscreenlocker = callPackage ./kscreenlocker.nix {}; - ksshaskpass = callPackage ./ksshaskpass.nix {}; - ksysguard = callPackage ./ksysguard.nix {}; - kwallet-pam = callPackage ./kwallet-pam.nix {}; - kwayland-integration = callPackage ./kwayland-integration.nix {}; - kwin = callPackage ./kwin {}; - kwrited = callPackage ./kwrited.nix {}; - libkscreen = callPackage ./libkscreen.nix {}; - libksysguard = callPackage ./libksysguard {}; - milou = callPackage ./milou.nix {}; - oxygen = callPackage ./oxygen.nix {}; - plasma-desktop = callPackage ./plasma-desktop {}; - plasma-integration = callPackage ./plasma-integration.nix {}; - plasma-nm = callPackage ./plasma-nm {}; - plasma-pa = callPackage ./plasma-pa.nix { - inherit gconf; - }; - plasma-workspace = callPackage ./plasma-workspace {}; - plasma-workspace-wallpapers = callPackage ./plasma-workspace-wallpapers.nix {}; - polkit-kde-agent = callPackage ./polkit-kde-agent.nix {}; - powerdevil = callPackage ./powerdevil.nix {}; - startkde = callPackage ./startkde {}; - systemsettings = callPackage ./systemsettings.nix {}; - }; - -in lib.makeScope libsForQt5.newScope packages +in +lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 6204602e96a..d310c50e035 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -16822,11 +16822,10 @@ with pkgs; pantheon-terminal = callPackage ../desktops/pantheon/apps/pantheon-terminal { }; }; - plasma5 = import ../desktops/plasma-5 { - inherit stdenv lib libsForQt5 makeSetupHook symlinkJoin fetchurl; - inherit kdeDerivation; + plasma5 = recurseIntoAttrs (import ../desktops/plasma-5 { + inherit libsForQt5 kdeDerivation lib fetchurl; inherit (gnome3) gconf; - }; + }); redshift = callPackage ../applications/misc/redshift { inherit (python3Packages) python pygobject3 pyxdg; From 8be4bd7416ca977a6b8513957513355f01c397cc Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:34:51 -0600 Subject: [PATCH 180/216] kdeApplications: Move out of desktops/kde-5 - There is no such thing as KDE 5 --- .../kde}/akonadi-contacts.nix | 0 .../kde}/akonadi-mime.nix | 0 .../kde}/akonadi.nix | 0 .../kde}/ark/default.nix | 0 .../kde}/baloo-widgets.nix | 0 .../kde/build-support/application.nix} | 0 pkgs/applications/kde/default.nix | 95 +++++++++++++++++++ .../kde}/dolphin-plugins.nix | 0 .../kde}/dolphin.nix | 0 .../kde}/fetch.sh | 0 .../kde}/ffmpegthumbs.nix | 0 .../kde}/filelight.nix | 0 .../kde}/gwenview.nix | 0 .../kde}/kate.nix | 0 .../kde}/kcalc.nix | 0 .../kde}/kcolorchooser.nix | 0 .../kde}/kcontacts.nix | 0 .../kde}/kde-locale-4.nix | 0 .../kde}/kde-locale-5.nix | 0 .../kde}/kdegraphics-mobipocket.nix | 0 .../kde}/kdegraphics-thumbnailers.nix | 0 .../0001-old-kde4-cmake-policies.patch | 0 .../kdelibs/0002-polkit-install-path.patch | 0 .../kdelibs/0003-remove_xdg_impurities.patch | 0 .../kde}/kdelibs/default.nix | 2 +- .../kde}/kdenetwork-filesharing.nix | 0 .../kde}/kdenlive.nix | 0 .../applications => applications/kde}/kdf.nix | 0 .../kde}/kgpg.nix | 0 .../kde}/khelpcenter.nix | 0 .../applications => applications/kde}/kig.nix | 0 .../kde}/kio-extras.nix | 0 .../kde}/kmime.nix | 0 .../kde}/kmix.nix | 0 .../kde}/kompare.nix | 0 .../kde}/konsole.nix | 0 .../kde}/kwalletmanager.nix | 0 .../kde}/l10n.nix | 4 +- .../kde}/libkdcraw.nix | 0 .../kde}/libkexiv2.nix | 0 .../kde}/libkipi.nix | 0 .../kde}/libkomparediff2.nix | 0 .../kde}/marble.nix | 0 .../kde}/okteta.nix | 0 .../kde}/okular.nix | 0 .../kde}/print-manager.nix | 0 .../kde}/spectacle.nix | 0 .../kde}/srcs.nix | 0 pkgs/desktops/kde-5/applications/default.nix | 95 ------------------- pkgs/top-level/all-packages.nix | 6 +- 50 files changed, 101 insertions(+), 101 deletions(-) rename pkgs/{desktops/kde-5/applications => applications/kde}/akonadi-contacts.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/akonadi-mime.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/akonadi.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/ark/default.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/baloo-widgets.nix (100%) rename pkgs/{desktops/kde-5/applications/kde-app.nix => applications/kde/build-support/application.nix} (100%) create mode 100644 pkgs/applications/kde/default.nix rename pkgs/{desktops/kde-5/applications => applications/kde}/dolphin-plugins.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/dolphin.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/fetch.sh (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/ffmpegthumbs.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/filelight.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/gwenview.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kate.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kcalc.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kcolorchooser.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kcontacts.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kde-locale-4.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kde-locale-5.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdegraphics-mobipocket.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdegraphics-thumbnailers.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdelibs/0001-old-kde4-cmake-policies.patch (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdelibs/0002-polkit-install-path.patch (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdelibs/0003-remove_xdg_impurities.patch (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdelibs/default.nix (97%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdenetwork-filesharing.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdenlive.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kdf.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kgpg.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/khelpcenter.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kig.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kio-extras.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kmime.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kmix.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kompare.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/konsole.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/kwalletmanager.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/l10n.nix (98%) rename pkgs/{desktops/kde-5/applications => applications/kde}/libkdcraw.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/libkexiv2.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/libkipi.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/libkomparediff2.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/marble.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/okteta.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/okular.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/print-manager.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/spectacle.nix (100%) rename pkgs/{desktops/kde-5/applications => applications/kde}/srcs.nix (100%) delete mode 100644 pkgs/desktops/kde-5/applications/default.nix diff --git a/pkgs/desktops/kde-5/applications/akonadi-contacts.nix b/pkgs/applications/kde/akonadi-contacts.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/akonadi-contacts.nix rename to pkgs/applications/kde/akonadi-contacts.nix diff --git a/pkgs/desktops/kde-5/applications/akonadi-mime.nix b/pkgs/applications/kde/akonadi-mime.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/akonadi-mime.nix rename to pkgs/applications/kde/akonadi-mime.nix diff --git a/pkgs/desktops/kde-5/applications/akonadi.nix b/pkgs/applications/kde/akonadi.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/akonadi.nix rename to pkgs/applications/kde/akonadi.nix diff --git a/pkgs/desktops/kde-5/applications/ark/default.nix b/pkgs/applications/kde/ark/default.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/ark/default.nix rename to pkgs/applications/kde/ark/default.nix diff --git a/pkgs/desktops/kde-5/applications/baloo-widgets.nix b/pkgs/applications/kde/baloo-widgets.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/baloo-widgets.nix rename to pkgs/applications/kde/baloo-widgets.nix diff --git a/pkgs/desktops/kde-5/applications/kde-app.nix b/pkgs/applications/kde/build-support/application.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kde-app.nix rename to pkgs/applications/kde/build-support/application.nix diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix new file mode 100644 index 00000000000..e638378ddbb --- /dev/null +++ b/pkgs/applications/kde/default.nix @@ -0,0 +1,95 @@ +/* + +# New packages + +READ THIS FIRST + +This module is for official packages in the KDE Applications Bundle. All +available packages are listed in `./srcs.nix`, although some are not yet +packaged in Nixpkgs (see below). + +IF YOUR PACKAGE IS NOT LISTED IN `./srcs.nix`, IT DOES NOT GO HERE. + +Many of the packages released upstream are not yet built in Nixpkgs due to lack +of demand. To add a Nixpkgs build for an upstream package, copy one of the +existing packages here and modify it as necessary. A simple example package that +still shows most of the available features is in `./gwenview.nix`. + +# Updates + +1. Update the URL in `./fetch.sh`. +2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/kde-5/applications` + from the top of the Nixpkgs tree. +3. Use `nox-review wip` to check that everything builds. +4. Commit the changes and open a pull request. + +*/ + +{ + stdenv, lib, libsForQt5, fetchurl, recurseIntoAttrs, + kdeDerivation, plasma5, + attica, phonon, + debug ? false, +}: + +let + mirror = "mirror://kde"; + srcs = import ./srcs.nix { inherit fetchurl mirror; }; +in + +let + + packages = self: with self; + let + callPackage = self.newScope { + kdeApp = import ./build-support/application.nix { + inherit lib kdeDerivation; + inherit debug srcs; + }; + }; + in { + kdelibs = callPackage ./kdelibs { inherit attica phonon; }; + akonadi = callPackage ./akonadi.nix {}; + akonadi-contacts = callPackage ./akonadi-contacts.nix {}; + akonadi-mime = callPackage ./akonadi-mime.nix {}; + ark = callPackage ./ark/default.nix {}; + baloo-widgets = callPackage ./baloo-widgets.nix {}; + dolphin = callPackage ./dolphin.nix {}; + dolphin-plugins = callPackage ./dolphin-plugins.nix {}; + ffmpegthumbs = callPackage ./ffmpegthumbs.nix { }; + filelight = callPackage ./filelight.nix {}; + gwenview = callPackage ./gwenview.nix {}; + kate = callPackage ./kate.nix {}; + kdenlive = callPackage ./kdenlive.nix {}; + kcalc = callPackage ./kcalc.nix {}; + kcolorchooser = callPackage ./kcolorchooser.nix {}; + kcontacts = callPackage ./kcontacts.nix {}; + kdegraphics-mobipocket = callPackage ./kdegraphics-mobipocket.nix {}; + kdegraphics-thumbnailers = callPackage ./kdegraphics-thumbnailers.nix {}; + kdenetwork-filesharing = callPackage ./kdenetwork-filesharing.nix {}; + kdf = callPackage ./kdf.nix {}; + kgpg = callPackage ./kgpg.nix {}; + khelpcenter = callPackage ./khelpcenter.nix {}; + kig = callPackage ./kig.nix {}; + kio-extras = callPackage ./kio-extras.nix {}; + kmime = callPackage ./kmime.nix {}; + kmix = callPackage ./kmix.nix {}; + kompare = callPackage ./kompare.nix {}; + konsole = callPackage ./konsole.nix {}; + kwalletmanager = callPackage ./kwalletmanager.nix {}; + libkdcraw = callPackage ./libkdcraw.nix {}; + libkexiv2 = callPackage ./libkexiv2.nix {}; + libkipi = callPackage ./libkipi.nix {}; + libkomparediff2 = callPackage ./libkomparediff2.nix {}; + marble = callPackage ./marble.nix {}; + okteta = callPackage ./okteta.nix {}; + okular = callPackage ./okular.nix {}; + print-manager = callPackage ./print-manager.nix {}; + spectacle = callPackage ./spectacle.nix { + inherit (plasma5) kscreen; + }; + + l10n = recurseIntoAttrs (import ./l10n.nix { inherit callPackage lib recurseIntoAttrs; }); + }; + +in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/desktops/kde-5/applications/dolphin-plugins.nix b/pkgs/applications/kde/dolphin-plugins.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/dolphin-plugins.nix rename to pkgs/applications/kde/dolphin-plugins.nix diff --git a/pkgs/desktops/kde-5/applications/dolphin.nix b/pkgs/applications/kde/dolphin.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/dolphin.nix rename to pkgs/applications/kde/dolphin.nix diff --git a/pkgs/desktops/kde-5/applications/fetch.sh b/pkgs/applications/kde/fetch.sh similarity index 100% rename from pkgs/desktops/kde-5/applications/fetch.sh rename to pkgs/applications/kde/fetch.sh diff --git a/pkgs/desktops/kde-5/applications/ffmpegthumbs.nix b/pkgs/applications/kde/ffmpegthumbs.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/ffmpegthumbs.nix rename to pkgs/applications/kde/ffmpegthumbs.nix diff --git a/pkgs/desktops/kde-5/applications/filelight.nix b/pkgs/applications/kde/filelight.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/filelight.nix rename to pkgs/applications/kde/filelight.nix diff --git a/pkgs/desktops/kde-5/applications/gwenview.nix b/pkgs/applications/kde/gwenview.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/gwenview.nix rename to pkgs/applications/kde/gwenview.nix diff --git a/pkgs/desktops/kde-5/applications/kate.nix b/pkgs/applications/kde/kate.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kate.nix rename to pkgs/applications/kde/kate.nix diff --git a/pkgs/desktops/kde-5/applications/kcalc.nix b/pkgs/applications/kde/kcalc.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kcalc.nix rename to pkgs/applications/kde/kcalc.nix diff --git a/pkgs/desktops/kde-5/applications/kcolorchooser.nix b/pkgs/applications/kde/kcolorchooser.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kcolorchooser.nix rename to pkgs/applications/kde/kcolorchooser.nix diff --git a/pkgs/desktops/kde-5/applications/kcontacts.nix b/pkgs/applications/kde/kcontacts.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kcontacts.nix rename to pkgs/applications/kde/kcontacts.nix diff --git a/pkgs/desktops/kde-5/applications/kde-locale-4.nix b/pkgs/applications/kde/kde-locale-4.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kde-locale-4.nix rename to pkgs/applications/kde/kde-locale-4.nix diff --git a/pkgs/desktops/kde-5/applications/kde-locale-5.nix b/pkgs/applications/kde/kde-locale-5.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kde-locale-5.nix rename to pkgs/applications/kde/kde-locale-5.nix diff --git a/pkgs/desktops/kde-5/applications/kdegraphics-mobipocket.nix b/pkgs/applications/kde/kdegraphics-mobipocket.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kdegraphics-mobipocket.nix rename to pkgs/applications/kde/kdegraphics-mobipocket.nix diff --git a/pkgs/desktops/kde-5/applications/kdegraphics-thumbnailers.nix b/pkgs/applications/kde/kdegraphics-thumbnailers.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kdegraphics-thumbnailers.nix rename to pkgs/applications/kde/kdegraphics-thumbnailers.nix diff --git a/pkgs/desktops/kde-5/applications/kdelibs/0001-old-kde4-cmake-policies.patch b/pkgs/applications/kde/kdelibs/0001-old-kde4-cmake-policies.patch similarity index 100% rename from pkgs/desktops/kde-5/applications/kdelibs/0001-old-kde4-cmake-policies.patch rename to pkgs/applications/kde/kdelibs/0001-old-kde4-cmake-policies.patch diff --git a/pkgs/desktops/kde-5/applications/kdelibs/0002-polkit-install-path.patch b/pkgs/applications/kde/kdelibs/0002-polkit-install-path.patch similarity index 100% rename from pkgs/desktops/kde-5/applications/kdelibs/0002-polkit-install-path.patch rename to pkgs/applications/kde/kdelibs/0002-polkit-install-path.patch diff --git a/pkgs/desktops/kde-5/applications/kdelibs/0003-remove_xdg_impurities.patch b/pkgs/applications/kde/kdelibs/0003-remove_xdg_impurities.patch similarity index 100% rename from pkgs/desktops/kde-5/applications/kdelibs/0003-remove_xdg_impurities.patch rename to pkgs/applications/kde/kdelibs/0003-remove_xdg_impurities.patch diff --git a/pkgs/desktops/kde-5/applications/kdelibs/default.nix b/pkgs/applications/kde/kdelibs/default.nix similarity index 97% rename from pkgs/desktops/kde-5/applications/kdelibs/default.nix rename to pkgs/applications/kde/kdelibs/default.nix index c7c8c250a83..0292b51a48d 100644 --- a/pkgs/desktops/kde-5/applications/kdelibs/default.nix +++ b/pkgs/applications/kde/kdelibs/default.nix @@ -1,5 +1,5 @@ { - kdeApp, lib, src, version, + kdeApp, lib, automoc4, bison, cmake, flex, libxslt, perl, pkgconfig, shared_mime_info, attica, attr, avahi, docbook_xml_dtd_42, docbook_xsl, giflib, ilmbase, libdbusmenu_qt, libjpeg, libxml2, phonon, polkit_qt4, qca2, qt4, diff --git a/pkgs/desktops/kde-5/applications/kdenetwork-filesharing.nix b/pkgs/applications/kde/kdenetwork-filesharing.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kdenetwork-filesharing.nix rename to pkgs/applications/kde/kdenetwork-filesharing.nix diff --git a/pkgs/desktops/kde-5/applications/kdenlive.nix b/pkgs/applications/kde/kdenlive.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kdenlive.nix rename to pkgs/applications/kde/kdenlive.nix diff --git a/pkgs/desktops/kde-5/applications/kdf.nix b/pkgs/applications/kde/kdf.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kdf.nix rename to pkgs/applications/kde/kdf.nix diff --git a/pkgs/desktops/kde-5/applications/kgpg.nix b/pkgs/applications/kde/kgpg.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kgpg.nix rename to pkgs/applications/kde/kgpg.nix diff --git a/pkgs/desktops/kde-5/applications/khelpcenter.nix b/pkgs/applications/kde/khelpcenter.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/khelpcenter.nix rename to pkgs/applications/kde/khelpcenter.nix diff --git a/pkgs/desktops/kde-5/applications/kig.nix b/pkgs/applications/kde/kig.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kig.nix rename to pkgs/applications/kde/kig.nix diff --git a/pkgs/desktops/kde-5/applications/kio-extras.nix b/pkgs/applications/kde/kio-extras.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kio-extras.nix rename to pkgs/applications/kde/kio-extras.nix diff --git a/pkgs/desktops/kde-5/applications/kmime.nix b/pkgs/applications/kde/kmime.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kmime.nix rename to pkgs/applications/kde/kmime.nix diff --git a/pkgs/desktops/kde-5/applications/kmix.nix b/pkgs/applications/kde/kmix.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kmix.nix rename to pkgs/applications/kde/kmix.nix diff --git a/pkgs/desktops/kde-5/applications/kompare.nix b/pkgs/applications/kde/kompare.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kompare.nix rename to pkgs/applications/kde/kompare.nix diff --git a/pkgs/desktops/kde-5/applications/konsole.nix b/pkgs/applications/kde/konsole.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/konsole.nix rename to pkgs/applications/kde/konsole.nix diff --git a/pkgs/desktops/kde-5/applications/kwalletmanager.nix b/pkgs/applications/kde/kwalletmanager.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/kwalletmanager.nix rename to pkgs/applications/kde/kwalletmanager.nix diff --git a/pkgs/desktops/kde-5/applications/l10n.nix b/pkgs/applications/kde/l10n.nix similarity index 98% rename from pkgs/desktops/kde-5/applications/l10n.nix rename to pkgs/applications/kde/l10n.nix index f2e5f843b5d..87e7a82ce46 100644 --- a/pkgs/desktops/kde-5/applications/l10n.nix +++ b/pkgs/applications/kde/l10n.nix @@ -1,4 +1,4 @@ -{ callPackage, pkgs, lib }: +{ callPackage, recurseIntoAttrs, lib }: let @@ -7,7 +7,7 @@ let in -lib.mapAttrs (name: attr: pkgs.recurseIntoAttrs attr) { +lib.mapAttrs (name: attr: recurseIntoAttrs attr) { ar = { qt4 = callPackage (kdeLocale4 "ar" {}) {}; qt5 = callPackage (kdeLocale5 "ar" {}) {}; diff --git a/pkgs/desktops/kde-5/applications/libkdcraw.nix b/pkgs/applications/kde/libkdcraw.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/libkdcraw.nix rename to pkgs/applications/kde/libkdcraw.nix diff --git a/pkgs/desktops/kde-5/applications/libkexiv2.nix b/pkgs/applications/kde/libkexiv2.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/libkexiv2.nix rename to pkgs/applications/kde/libkexiv2.nix diff --git a/pkgs/desktops/kde-5/applications/libkipi.nix b/pkgs/applications/kde/libkipi.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/libkipi.nix rename to pkgs/applications/kde/libkipi.nix diff --git a/pkgs/desktops/kde-5/applications/libkomparediff2.nix b/pkgs/applications/kde/libkomparediff2.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/libkomparediff2.nix rename to pkgs/applications/kde/libkomparediff2.nix diff --git a/pkgs/desktops/kde-5/applications/marble.nix b/pkgs/applications/kde/marble.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/marble.nix rename to pkgs/applications/kde/marble.nix diff --git a/pkgs/desktops/kde-5/applications/okteta.nix b/pkgs/applications/kde/okteta.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/okteta.nix rename to pkgs/applications/kde/okteta.nix diff --git a/pkgs/desktops/kde-5/applications/okular.nix b/pkgs/applications/kde/okular.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/okular.nix rename to pkgs/applications/kde/okular.nix diff --git a/pkgs/desktops/kde-5/applications/print-manager.nix b/pkgs/applications/kde/print-manager.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/print-manager.nix rename to pkgs/applications/kde/print-manager.nix diff --git a/pkgs/desktops/kde-5/applications/spectacle.nix b/pkgs/applications/kde/spectacle.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/spectacle.nix rename to pkgs/applications/kde/spectacle.nix diff --git a/pkgs/desktops/kde-5/applications/srcs.nix b/pkgs/applications/kde/srcs.nix similarity index 100% rename from pkgs/desktops/kde-5/applications/srcs.nix rename to pkgs/applications/kde/srcs.nix diff --git a/pkgs/desktops/kde-5/applications/default.nix b/pkgs/desktops/kde-5/applications/default.nix deleted file mode 100644 index 832b88c7e80..00000000000 --- a/pkgs/desktops/kde-5/applications/default.nix +++ /dev/null @@ -1,95 +0,0 @@ -/* - -# New packages - -READ THIS FIRST - -This module is for official packages in the KDE Applications Bundle. All -available packages are listed in `./srcs.nix`, although some are not yet -packaged in Nixpkgs (see below). - -IF YOUR PACKAGE IS NOT LISTED IN `./srcs.nix`, IT DOES NOT GO HERE. - -Many of the packages released upstream are not yet built in Nixpkgs due to lack -of demand. To add a Nixpkgs build for an upstream package, copy one of the -existing packages here and modify it as necessary. A simple example package that -still shows most of the available features is in `./gwenview.nix`. - -# Updates - -1. Update the URL in `./fetch.sh`. -2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/desktops/kde-5/applications` - from the top of the Nixpkgs tree. -3. Use `nox-review wip` to check that everything builds. -4. Commit the changes and open a pull request. - -*/ - -{ - stdenv, lib, libsForQt5, fetchurl, - kdeDerivation, plasma5, - attica, phonon, - debug ? false, -}: - -let - - mirror = "mirror://kde"; - srcs = import ./srcs.nix { inherit fetchurl mirror; }; - - packages = self: with self; { - - kdeApp = import ./kde-app.nix { - inherit lib kdeDerivation; - inherit debug srcs; - }; - - kdelibs = callPackage ./kdelibs { - inherit (srcs.kdelibs) src version; - inherit attica phonon; - }; - - akonadi = callPackage ./akonadi.nix {}; - akonadi-contacts = callPackage ./akonadi-contacts.nix {}; - akonadi-mime = callPackage ./akonadi-mime.nix {}; - ark = callPackage ./ark/default.nix {}; - baloo-widgets = callPackage ./baloo-widgets.nix {}; - dolphin = callPackage ./dolphin.nix {}; - dolphin-plugins = callPackage ./dolphin-plugins.nix {}; - ffmpegthumbs = callPackage ./ffmpegthumbs.nix { }; - filelight = callPackage ./filelight.nix {}; - gwenview = callPackage ./gwenview.nix {}; - kate = callPackage ./kate.nix {}; - kdenlive = callPackage ./kdenlive.nix {}; - kcalc = callPackage ./kcalc.nix {}; - kcolorchooser = callPackage ./kcolorchooser.nix {}; - kcontacts = callPackage ./kcontacts.nix {}; - kdegraphics-mobipocket = callPackage ./kdegraphics-mobipocket.nix {}; - kdegraphics-thumbnailers = callPackage ./kdegraphics-thumbnailers.nix {}; - kdenetwork-filesharing = callPackage ./kdenetwork-filesharing.nix {}; - kdf = callPackage ./kdf.nix {}; - kgpg = callPackage ./kgpg.nix {}; - khelpcenter = callPackage ./khelpcenter.nix {}; - kig = callPackage ./kig.nix {}; - kio-extras = callPackage ./kio-extras.nix {}; - kmime = callPackage ./kmime.nix {}; - kmix = callPackage ./kmix.nix {}; - kompare = callPackage ./kompare.nix {}; - konsole = callPackage ./konsole.nix {}; - kwalletmanager = callPackage ./kwalletmanager.nix {}; - libkdcraw = callPackage ./libkdcraw.nix {}; - libkexiv2 = callPackage ./libkexiv2.nix {}; - libkipi = callPackage ./libkipi.nix {}; - libkomparediff2 = callPackage ./libkomparediff2.nix {}; - marble = callPackage ./marble.nix {}; - okteta = callPackage ./okteta.nix {}; - okular = callPackage ./okular.nix {}; - print-manager = callPackage ./print-manager.nix {}; - spectacle = callPackage ./spectacle.nix { - inherit (plasma5) kscreen; - }; - - l10n = pkgs.recurseIntoAttrs (import ./l10n.nix { inherit callPackage lib pkgs; }); - }; - -in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index d310c50e035..297aae6147e 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -14055,11 +14055,11 @@ with pkgs; kde-telepathy = kde4.callPackage ../applications/networking/instant-messengers/telepathy/kde {}; - kdeApplications = import ../desktops/kde-5/applications { - inherit stdenv lib libsForQt5 fetchurl; + kdeApplications = recurseIntoAttrs (import ../applications/kde { + inherit stdenv lib libsForQt5 fetchurl recurseIntoAttrs; inherit kdeDerivation plasma5; inherit attica phonon; - }; + }); kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; From f21d4d00152726c02f870cb20faba4aca18ef49a Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 14:43:13 -0600 Subject: [PATCH 181/216] nixos/plasma5: Rename Plasma 5 desktop - There is no such thing as KDE 5 --- nixos/modules/rename.nix | 3 +++ .../services/x11/desktop-managers/default.nix | 4 ++-- .../x11/desktop-managers/{kde5.nix => plasma5.nix} | 12 ++++++------ 3 files changed, 11 insertions(+), 8 deletions(-) rename nixos/modules/services/x11/desktop-managers/{kde5.nix => plasma5.nix} (95%) diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix index ee68f8bff81..ff3654737af 100644 --- a/nixos/modules/rename.nix +++ b/nixos/modules/rename.nix @@ -178,6 +178,9 @@ with lib; (mkRenamedOptionModule [ "services" "nfs" "lockdPort" ] [ "services" "nfs" "server" "lockdPort" ]) (mkRenamedOptionModule [ "services" "nfs" "statdPort" ] [ "services" "nfs" "server" "statdPort" ]) + # KDE Plasma 5 + (mkRenamedOptionModule [ "services" "xserver" "desktopManager" "kde5" ] [ "services" "xserver" "desktopManager" "plasma5" ]) + # Options that are obsolete and have no replacement. (mkRemovedOptionModule [ "boot" "initrd" "luks" "enable" ] "") (mkRemovedOptionModule [ "programs" "bash" "enable" ] "") diff --git a/nixos/modules/services/x11/desktop-managers/default.nix b/nixos/modules/services/x11/desktop-managers/default.nix index 1f7a925ed05..af01f6acad1 100644 --- a/nixos/modules/services/x11/desktop-managers/default.nix +++ b/nixos/modules/services/x11/desktop-managers/default.nix @@ -16,9 +16,9 @@ in { # Note: the order in which desktop manager modules are imported here # determines the default: later modules (if enabled) are preferred. - # E.g., if KDE is enabled, it supersedes xterm. + # E.g., if Plasma 5 is enabled, it supersedes xterm. imports = [ - ./none.nix ./xterm.nix ./xfce.nix ./kde5.nix ./lumina.nix + ./none.nix ./xterm.nix ./xfce.nix ./plasma5.nix ./lumina.nix ./lxqt.nix ./enlightenment.nix ./gnome3.nix ./kodi.nix ]; diff --git a/nixos/modules/services/x11/desktop-managers/kde5.nix b/nixos/modules/services/x11/desktop-managers/plasma5.nix similarity index 95% rename from nixos/modules/services/x11/desktop-managers/kde5.nix rename to nixos/modules/services/x11/desktop-managers/plasma5.nix index 57924a73949..4dbd8d7a2c0 100644 --- a/nixos/modules/services/x11/desktop-managers/kde5.nix +++ b/nixos/modules/services/x11/desktop-managers/plasma5.nix @@ -5,16 +5,16 @@ with lib; let xcfg = config.services.xserver; - cfg = xcfg.desktopManager.kde5; + cfg = xcfg.desktopManager.plasma5; - inherit (pkgs) kdeApplications plasma5 libsForQt5 qt5 xorg; + inherit (pkgs) kdeWrapper kdeApplications plasma5 libsForQt5 qt5 xorg; in { options = { - services.xserver.desktopManager.kde5 = { + services.xserver.desktopManager.plasma5 = { enable = mkOption { type = types.bool; default = false; @@ -45,12 +45,12 @@ in config = mkMerge [ (mkIf (cfg.extraPackages != []) { - environment.systemPackages = [ (libsForQt5.kdeWrapper cfg.extraPackages) ]; + environment.systemPackages = [ (kdeWrapper cfg.extraPackages) ]; }) (mkIf (xcfg.enable && cfg.enable) { services.xserver.desktopManager.session = singleton { - name = "Plasma 5"; + name = "plasma5"; bgSupport = true; start = '' # Load PulseAudio module for routing support. @@ -163,7 +163,7 @@ in ++ lib.optional config.services.colord.enable colord-kde ++ lib.optionals config.services.samba.enable [ kdenetwork-filesharing pkgs.samba ]; - services.xserver.desktopManager.kde5.extraPackages = + services.xserver.desktopManager.plasma5.extraPackages = with kdeApplications; with plasma5; [ khelpcenter From 490bbb288e1bba612d9aeccec1edec51de1ae19f Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 18:24:13 -0600 Subject: [PATCH 182/216] qt56: Update instructions --- .../libraries/qt-5/5.6/default.nix | 25 +++++++++++++------ 1 file changed, 17 insertions(+), 8 deletions(-) diff --git a/pkgs/development/libraries/qt-5/5.6/default.nix b/pkgs/development/libraries/qt-5/5.6/default.nix index 542bf41d587..710cf6bd139 100644 --- a/pkgs/development/libraries/qt-5/5.6/default.nix +++ b/pkgs/development/libraries/qt-5/5.6/default.nix @@ -1,15 +1,24 @@ /* +# New packages + +READ THIS FIRST + +This module is for official packages in Qt 5. All available packages are listed +in `./srcs.nix`, although a few are not yet packaged in Nixpkgs (see below). + +IF YOUR PACKAGE IS NOT LISTED IN `./srcs.nix`, IT DOES NOT GO HERE. + +Many of the packages released upstream are not yet built in Nixpkgs due to lack +of demand. To add a Nixpkgs build for an upstream package, copy one of the +existing packages here and modify it as necessary. + # Updates -Before a major version update, make a copy of this directory. (We like to -keep the old version around for a short time after major updates.) Add a -top-level attribute to `top-level/all-packages.nix`. - -1. Update the URL in `maintainers/scripts/generate-qt.sh`. -2. From the top of the Nixpkgs tree, run - `./maintainers/scripts/generate-qt.sh > pkgs/development/libraries/qt-5/$VERSION/srcs.nix`. -3. Check that the new packages build correctly. +1. Update the URL in `./fetch.sh`. +2. Run `./maintainers/scripts/fetch-kde-qt.sh pkgs/development/libraries/qt-5/$VERSION/` + from the top of the Nixpkgs tree. +3. Use `nox-review wip` to check that everything builds. 4. Commit the changes and open a pull request. */ From e21b5da6305ec15b65ad398106efe39f290a4095 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 18:27:49 -0600 Subject: [PATCH 183/216] qt56.qtquickcontrols2: init at 5.6.2 --- pkgs/development/libraries/qt-5/5.6/default.nix | 1 + pkgs/development/libraries/qt-5/5.6/qtquickcontrols2.nix | 6 ++++++ 2 files changed, 7 insertions(+) create mode 100644 pkgs/development/libraries/qt-5/5.6/qtquickcontrols2.nix diff --git a/pkgs/development/libraries/qt-5/5.6/default.nix b/pkgs/development/libraries/qt-5/5.6/default.nix index 710cf6bd139..fd6b622344a 100644 --- a/pkgs/development/libraries/qt-5/5.6/default.nix +++ b/pkgs/development/libraries/qt-5/5.6/default.nix @@ -94,6 +94,7 @@ let inherit gstreamer gst-plugins-base; }; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; + qtquickcontrols2 = callPackage ./qtquickcontrols2.nix {}; qtscript = callPackage ./qtscript {}; qtsensors = callPackage ./qtsensors.nix {}; qtserialport = callPackage ./qtserialport {}; diff --git a/pkgs/development/libraries/qt-5/5.6/qtquickcontrols2.nix b/pkgs/development/libraries/qt-5/5.6/qtquickcontrols2.nix new file mode 100644 index 00000000000..19750f2fd99 --- /dev/null +++ b/pkgs/development/libraries/qt-5/5.6/qtquickcontrols2.nix @@ -0,0 +1,6 @@ +{ qtSubmodule, qtdeclarative }: + +qtSubmodule { + name = "qtquickcontrols2"; + qtInputs = [ qtdeclarative ]; +} From b39e491eb521d93ae983bc63b10efad3d147a9cd Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sat, 25 Feb 2017 18:58:53 -0600 Subject: [PATCH 184/216] lib.makeScope: Save package set function --- lib/customisation.nix | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/lib/customisation.nix b/lib/customisation.nix index bedb91af773..a6c24f083a5 100644 --- a/lib/customisation.nix +++ b/lib/customisation.nix @@ -177,9 +177,10 @@ rec { let self = f self // { newScope = scope: newScope (self // scope); callPackage = self.newScope {}; - override = g: makeScope newScope (self_: - let super = f self_; - in super // g super self_); + override = g: + makeScope newScope + (self_: let super = f self_; in super // g super self_); + packages = f; }; in self; From 127bf18a350afa562cad3f8cb3b2f626edd23de0 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 06:49:15 -0600 Subject: [PATCH 185/216] extra-cmake-modules: Lift Qt dependency --- .../services/x11/desktop-managers/plasma5.nix | 12 +- pkgs/applications/editors/kile/default.nix | 4 +- .../applications/graphics/digikam/default.nix | 4 +- .../graphics/kipi-plugins/default.nix | 4 +- pkgs/applications/kde/akonadi-contacts.nix | 4 +- pkgs/applications/kde/akonadi-mime.nix | 4 +- pkgs/applications/kde/akonadi.nix | 4 +- pkgs/applications/kde/ark/default.nix | 4 +- pkgs/applications/kde/baloo-widgets.nix | 4 +- pkgs/applications/kde/dolphin-plugins.nix | 4 +- pkgs/applications/kde/dolphin.nix | 4 +- pkgs/applications/kde/ffmpegthumbs.nix | 4 +- pkgs/applications/kde/filelight.nix | 4 +- pkgs/applications/kde/gwenview.nix | 4 +- pkgs/applications/kde/kate.nix | 4 +- pkgs/applications/kde/kcalc.nix | 4 +- pkgs/applications/kde/kcolorchooser.nix | 4 +- pkgs/applications/kde/kcontacts.nix | 4 +- pkgs/applications/kde/kde-locale-5.nix | 4 +- .../kde/kdegraphics-mobipocket.nix | 4 +- .../kde/kdegraphics-thumbnailers.nix | 4 +- .../kde/kdenetwork-filesharing.nix | 4 +- pkgs/applications/kde/kdf.nix | 4 +- pkgs/applications/kde/kgpg.nix | 4 +- pkgs/applications/kde/khelpcenter.nix | 4 +- pkgs/applications/kde/kig.nix | 4 +- pkgs/applications/kde/kio-extras.nix | 4 +- pkgs/applications/kde/kmime.nix | 4 +- pkgs/applications/kde/kmix.nix | 4 +- pkgs/applications/kde/kompare.nix | 4 +- pkgs/applications/kde/konsole.nix | 4 +- pkgs/applications/kde/kwalletmanager.nix | 4 +- pkgs/applications/kde/libkdcraw.nix | 5 +- pkgs/applications/kde/libkexiv2.nix | 5 +- pkgs/applications/kde/libkipi.nix | 4 +- pkgs/applications/kde/libkomparediff2.nix | 4 +- pkgs/applications/kde/marble.nix | 4 +- pkgs/applications/kde/okteta.nix | 4 +- pkgs/applications/kde/okular.nix | 4 +- pkgs/applications/kde/print-manager.nix | 4 +- pkgs/applications/kde/spectacle.nix | 4 +- pkgs/applications/misc/krename/default.nix | 4 +- pkgs/applications/misc/yakuake/default.nix | 4 +- .../networking/irc/konversation/default.nix | 4 +- .../networking/p2p/ktorrent/default.nix | 4 +- .../networking/sniffers/wireshark/default.nix | 4 +- pkgs/applications/office/skrooge/default.nix | 4 +- pkgs/desktops/plasma-5/bluedevil.nix | 4 +- pkgs/desktops/plasma-5/breeze-gtk.nix | 6 +- .../plasma-5/breeze-plymouth/default.nix | 4 +- pkgs/desktops/plasma-5/breeze-qt5.nix | 4 +- pkgs/desktops/plasma-5/kactivitymanagerd.nix | 4 +- pkgs/desktops/plasma-5/kde-cli-tools.nix | 4 +- .../plasma-5/kde-gtk-config/default.nix | 4 +- pkgs/desktops/plasma-5/kdecoration.nix | 5 +- pkgs/desktops/plasma-5/kdeplasma-addons.nix | 4 +- pkgs/desktops/plasma-5/kgamma5.nix | 4 +- pkgs/desktops/plasma-5/khotkeys.nix | 4 +- pkgs/desktops/plasma-5/kinfocenter.nix | 4 +- pkgs/desktops/plasma-5/kmenuedit.nix | 4 +- pkgs/desktops/plasma-5/kscreen.nix | 4 +- pkgs/desktops/plasma-5/kscreenlocker.nix | 4 +- pkgs/desktops/plasma-5/ksshaskpass.nix | 4 +- pkgs/desktops/plasma-5/ksysguard.nix | 4 +- pkgs/desktops/plasma-5/kwallet-pam.nix | 4 +- .../plasma-5/kwayland-integration.nix | 4 +- pkgs/desktops/plasma-5/kwin/default.nix | 4 +- pkgs/desktops/plasma-5/kwrited.nix | 4 +- pkgs/desktops/plasma-5/libkscreen.nix | 4 +- .../plasma-5/libksysguard/default.nix | 4 +- pkgs/desktops/plasma-5/milou.nix | 4 +- pkgs/desktops/plasma-5/oxygen.nix | 4 +- .../plasma-5/plasma-desktop/default.nix | 4 +- pkgs/desktops/plasma-5/plasma-integration.nix | 4 +- pkgs/desktops/plasma-5/plasma-nm/default.nix | 4 +- pkgs/desktops/plasma-5/plasma-pa.nix | 4 +- .../plasma-5/plasma-workspace-wallpapers.nix | 4 +- .../plasma-5/plasma-workspace/default.nix | 4 +- pkgs/desktops/plasma-5/polkit-kde-agent.nix | 4 +- pkgs/desktops/plasma-5/powerdevil.nix | 4 +- pkgs/desktops/plasma-5/systemsettings.nix | 4 +- .../libraries/kde-frameworks/attica.nix | 5 +- .../libraries/kde-frameworks/baloo.nix | 4 +- .../libraries/kde-frameworks/bluez-qt.nix | 4 +- .../libraries/kde-frameworks/breeze-icons.nix | 4 +- .../libraries/kde-frameworks/default.nix | 164 +++++++++--------- .../extra-cmake-modules/default.nix | 22 ++- .../extra-cmake-modules/no-hooks.nix | 18 -- .../extra-cmake-modules/setup-hook.sh | 4 +- .../kde-frameworks/frameworkintegration.nix | 4 +- .../kde-frameworks/kactivities-stats.nix | 4 +- .../libraries/kde-frameworks/kactivities.nix | 4 +- .../libraries/kde-frameworks/kapidox.nix | 4 +- .../libraries/kde-frameworks/karchive.nix | 5 +- .../kde-frameworks/kauth/default.nix | 4 +- .../libraries/kde-frameworks/kbookmarks.nix | 4 +- .../kde-frameworks/kcmutils/default.nix | 4 +- .../libraries/kde-frameworks/kcodecs.nix | 5 +- .../libraries/kde-frameworks/kcompletion.nix | 5 +- .../libraries/kde-frameworks/kconfig.nix | 5 +- .../kde-frameworks/kconfigwidgets/default.nix | 4 +- .../libraries/kde-frameworks/kcoreaddons.nix | 5 +- .../libraries/kde-frameworks/kcrash.nix | 4 +- .../libraries/kde-frameworks/kdbusaddons.nix | 4 +- .../libraries/kde-frameworks/kdeclarative.nix | 4 +- .../libraries/kde-frameworks/kded.nix | 4 +- .../kdelibs4support/default.nix | 4 +- .../kde-frameworks/kdesignerplugin.nix | 4 +- .../libraries/kde-frameworks/kdesu.nix | 4 +- .../libraries/kde-frameworks/kdnssd.nix | 7 +- .../kde-frameworks/kdoctools/default.nix | 4 +- .../libraries/kde-frameworks/kemoticons.nix | 4 +- .../kde-frameworks/kfilemetadata/default.nix | 4 +- .../libraries/kde-frameworks/kglobalaccel.nix | 4 +- .../libraries/kde-frameworks/kguiaddons.nix | 4 +- .../libraries/kde-frameworks/khtml.nix | 4 +- .../libraries/kde-frameworks/ki18n.nix | 4 +- .../kde-frameworks/kiconthemes/default.nix | 4 +- .../libraries/kde-frameworks/kidletime.nix | 4 +- .../kde-frameworks/kimageformats.nix | 8 +- .../kde-frameworks/kinit/default.nix | 4 +- .../libraries/kde-frameworks/kio/default.nix | 4 +- .../libraries/kde-frameworks/kitemmodels.nix | 5 +- .../libraries/kde-frameworks/kitemviews.nix | 5 +- .../libraries/kde-frameworks/kjobwidgets.nix | 6 +- .../libraries/kde-frameworks/kjs.nix | 4 +- .../libraries/kde-frameworks/kjsembed.nix | 4 +- .../libraries/kde-frameworks/kmediaplayer.nix | 4 +- .../libraries/kde-frameworks/knewstuff.nix | 4 +- .../kde-frameworks/knotifications.nix | 6 +- .../kde-frameworks/knotifyconfig.nix | 4 +- .../kde-frameworks/kpackage/default.nix | 4 +- .../libraries/kde-frameworks/kparts.nix | 4 +- .../libraries/kde-frameworks/kpeople.nix | 4 +- .../libraries/kde-frameworks/kplotting.nix | 5 +- .../libraries/kde-frameworks/kpty.nix | 4 +- .../libraries/kde-frameworks/kross.nix | 4 +- .../libraries/kde-frameworks/krunner.nix | 4 +- .../kde-frameworks/kservice/default.nix | 4 +- .../libraries/kde-frameworks/ktexteditor.nix | 4 +- .../libraries/kde-frameworks/ktextwidgets.nix | 4 +- .../kde-frameworks/kunitconversion.nix | 4 +- .../libraries/kde-frameworks/kwallet.nix | 4 +- .../libraries/kde-frameworks/kwayland.nix | 7 +- .../kde-frameworks/kwidgetsaddons.nix | 5 +- .../kde-frameworks/kwindowsystem.nix | 6 +- .../libraries/kde-frameworks/kxmlgui.nix | 4 +- .../kde-frameworks/kxmlrpcclient.nix | 4 +- .../kde-frameworks/modemmanager-qt.nix | 7 +- .../kde-frameworks/networkmanager-qt.nix | 7 +- .../kde-frameworks/oxygen-icons5.nix | 5 +- .../kde-frameworks/plasma-framework.nix | 4 +- .../libraries/kde-frameworks/solid.nix | 6 +- .../libraries/kde-frameworks/sonnet.nix | 8 +- .../kde-frameworks/syntax-highlighting.nix | 5 +- .../libraries/kde-frameworks/threadweaver.nix | 5 +- .../libraries/kirigami/default.nix | 4 +- pkgs/development/libraries/kirigami/v2.nix | 4 +- .../libraries/libktorrent/default.nix | 4 +- pkgs/development/libraries/phonon/default.nix | 6 +- .../tools/profiling/heaptrack/default.nix | 4 +- pkgs/development/tools/tora/default.nix | 4 +- pkgs/tools/misc/colord-kde/default.nix | 4 +- .../tools/misc/kdecoration-viewer/default.nix | 4 +- pkgs/tools/misc/kronometer/default.nix | 4 +- pkgs/tools/misc/peruse/default.nix | 4 +- pkgs/tools/text/kdiff3/default.nix | 4 +- pkgs/top-level/all-packages.nix | 32 +++- 168 files changed, 493 insertions(+), 455 deletions(-) delete mode 100644 pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix diff --git a/nixos/modules/services/x11/desktop-managers/plasma5.nix b/nixos/modules/services/x11/desktop-managers/plasma5.nix index 4dbd8d7a2c0..24225308ffb 100644 --- a/nixos/modules/services/x11/desktop-managers/plasma5.nix +++ b/nixos/modules/services/x11/desktop-managers/plasma5.nix @@ -65,10 +65,10 @@ in security.wrappers = { kcheckpass.source = "${plasma5.plasma-workspace.out}/lib/libexec/kcheckpass"; - "start_kdeinit".source = "${libsForQt5.kinit.out}/lib/libexec/kf5/start_kdeinit"; + "start_kdeinit".source = "${pkgs.kinit.out}/lib/libexec/kf5/start_kdeinit"; }; - environment.systemPackages = with qt5; with libsForQt5; with plasma5; with kdeApplications; + environment.systemPackages = with pkgs; with qt5; with libsForQt5; with plasma5; with kdeApplications; [ frameworkintegration kactivities @@ -213,10 +213,10 @@ in services.xserver.displayManager.sddm = { theme = "breeze"; - themes = with libsForQt5; with plasma5; [ - ecm # for the setup-hook - plasma-workspace - breeze-icons + themes = [ + pkgs.extra-cmake-modules # for the setup-hook + plasma5.plasma-workspace + pkgs.breeze-icons ]; }; diff --git a/pkgs/applications/editors/kile/default.nix b/pkgs/applications/editors/kile/default.nix index ad3300b9221..a5914c92e8f 100644 --- a/pkgs/applications/editors/kile/default.nix +++ b/pkgs/applications/editors/kile/default.nix @@ -1,7 +1,7 @@ { kdeDerivation , lib , fetchgit -, ecm +, extra-cmake-modules , kdoctools , kdeWrapper , qtscript @@ -33,7 +33,7 @@ let }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ kconfig diff --git a/pkgs/applications/graphics/digikam/default.nix b/pkgs/applications/graphics/digikam/default.nix index a9d7d357ad7..00c0da7a78e 100644 --- a/pkgs/applications/graphics/digikam/default.nix +++ b/pkgs/applications/graphics/digikam/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, ecm, makeQtWrapper +{ stdenv, fetchurl, cmake, extra-cmake-modules, makeQtWrapper # For `digitaglinktree` , perl, sqlite @@ -52,7 +52,7 @@ stdenv.mkDerivation rec { sha256 = "0dgsgji14l5zvxny36hrfsp889fsfrsbbn9bg57m18404xp903kg"; }; - nativeBuildInputs = [ cmake ecm makeQtWrapper ]; + nativeBuildInputs = [ cmake extra-cmake-modules makeQtWrapper ]; patches = [ ./0001-Disable-fno-operator-names.patch ]; diff --git a/pkgs/applications/graphics/kipi-plugins/default.nix b/pkgs/applications/graphics/kipi-plugins/default.nix index 2f6cc8e4ece..d27fdb8b53b 100644 --- a/pkgs/applications/graphics/kipi-plugins/default.nix +++ b/pkgs/applications/graphics/kipi-plugins/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, - ecm, + extra-cmake-modules, karchive, kconfig, ki18n, kiconthemes, kio, kservice, kwindowsystem, kxmlgui, libkipi, qtbase, qtsvg, qtxmlpatterns }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { cd extra/kipi-plugins ''; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ karchive kconfig ki18n kiconthemes kio kservice kwindowsystem kxmlgui libkipi qtbase qtsvg qtxmlpatterns diff --git a/pkgs/applications/kde/akonadi-contacts.nix b/pkgs/applications/kde/akonadi-contacts.nix index 7acfa3a230b..830c9e6899e 100644 --- a/pkgs/applications/kde/akonadi-contacts.nix +++ b/pkgs/applications/kde/akonadi-contacts.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, + extra-cmake-modules, akonadi-mime, grantlee, kcontacts, kio, kitemmodels, kmime, qtwebengine, akonadi }: @@ -11,7 +11,7 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ akonadi-mime grantlee kcontacts kio kitemmodels kmime qtwebengine ]; diff --git a/pkgs/applications/kde/akonadi-mime.nix b/pkgs/applications/kde/akonadi-mime.nix index 26e1559c779..ba4b4b50242 100644 --- a/pkgs/applications/kde/akonadi-mime.nix +++ b/pkgs/applications/kde/akonadi-mime.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, + extra-cmake-modules, akonadi, kdbusaddons, kio, kitemmodels, kmime }: @@ -10,6 +10,6 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ akonadi kdbusaddons kio kitemmodels kmime ]; } diff --git a/pkgs/applications/kde/akonadi.nix b/pkgs/applications/kde/akonadi.nix index 03483e5ec0d..284ed60a9cb 100644 --- a/pkgs/applications/kde/akonadi.nix +++ b/pkgs/applications/kde/akonadi.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, + extra-cmake-modules, kcompletion, kconfigwidgets, kdbusaddons, kdesignerplugin, kiconthemes, kio, boost, kitemmodels @@ -12,7 +12,7 @@ kdeApp { license = [ lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ kcompletion kconfigwidgets kdbusaddons kdesignerplugin kiconthemes kio ]; diff --git a/pkgs/applications/kde/ark/default.nix b/pkgs/applications/kde/ark/default.nix index 6b471614f5a..f3adf1828de 100644 --- a/pkgs/applications/kde/ark/default.nix +++ b/pkgs/applications/kde/ark/default.nix @@ -1,7 +1,7 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, makeWrapper, + extra-cmake-modules, kdoctools, makeWrapper, karchive, kconfig, kcrash, kdbusaddons, ki18n, kiconthemes, khtml, kio, kservice, kpty, kwidgetsaddons, libarchive, @@ -15,7 +15,7 @@ let kdeApp { name = "ark"; nativeBuildInputs = [ - ecm kdoctools makeWrapper + extra-cmake-modules kdoctools makeWrapper ]; propagatedBuildInputs = [ khtml ki18n kio karchive kconfig kcrash kdbusaddons kiconthemes kservice diff --git a/pkgs/applications/kde/baloo-widgets.nix b/pkgs/applications/kde/baloo-widgets.nix index f6f3a7ce14e..bb680305709 100644 --- a/pkgs/applications/kde/baloo-widgets.nix +++ b/pkgs/applications/kde/baloo-widgets.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, kdoctools, + extra-cmake-modules, kdoctools, baloo, kconfig, kdelibs4support, kfilemetadata, ki18n, kio, kservice }: @@ -10,7 +10,7 @@ kdeApp { license = [ lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ baloo kconfig kdelibs4support kfilemetadata ki18n kio kservice ]; diff --git a/pkgs/applications/kde/dolphin-plugins.nix b/pkgs/applications/kde/dolphin-plugins.nix index e9932adc5dc..7f436c7a55a 100644 --- a/pkgs/applications/kde/dolphin-plugins.nix +++ b/pkgs/applications/kde/dolphin-plugins.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, kdoctools, + extra-cmake-modules, kdoctools, dolphin, kdelibs4support, ki18n, kio, kxmlgui }: @@ -10,7 +10,7 @@ kdeApp { license = [ lib.licenses.gpl2 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ dolphin.unwrapped kdelibs4support ki18n kio kxmlgui ]; diff --git a/pkgs/applications/kde/dolphin.nix b/pkgs/applications/kde/dolphin.nix index 9be40e9439b..6515c230c28 100644 --- a/pkgs/applications/kde/dolphin.nix +++ b/pkgs/applications/kde/dolphin.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, makeQtWrapper, + extra-cmake-modules, kdoctools, makeQtWrapper, baloo, baloo-widgets, dolphin-plugins, kactivities, kbookmarks, kcmutils, kcompletion, kconfig, kcoreaddons, kdelibs4support, kdbusaddons, kfilemetadata, ki18n, kiconthemes, kinit, kio, knewstuff, knotifications, @@ -15,7 +15,7 @@ let license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools makeQtWrapper ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools makeQtWrapper ]; propagatedBuildInputs = [ baloo baloo-widgets kactivities kbookmarks kcmutils kcompletion kconfig kcoreaddons kdelibs4support kdbusaddons kfilemetadata ki18n kiconthemes diff --git a/pkgs/applications/kde/ffmpegthumbs.nix b/pkgs/applications/kde/ffmpegthumbs.nix index c063b1e6035..5dde6d8a64e 100644 --- a/pkgs/applications/kde/ffmpegthumbs.nix +++ b/pkgs/applications/kde/ffmpegthumbs.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, + extra-cmake-modules, ffmpeg, kio }: @@ -10,6 +10,6 @@ kdeApp { license = with lib.licenses; [ gpl2 bsd3 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ ffmpeg kio ]; } diff --git a/pkgs/applications/kde/filelight.nix b/pkgs/applications/kde/filelight.nix index e3d9172145c..71ab51320ab 100644 --- a/pkgs/applications/kde/filelight.nix +++ b/pkgs/applications/kde/filelight.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kio, kparts, kxmlgui, qtscript, solid }: @@ -12,7 +12,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ fridh vcunat ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kio kparts kxmlgui qtscript solid ]; diff --git a/pkgs/applications/kde/gwenview.nix b/pkgs/applications/kde/gwenview.nix index 37a1605fe70..0fa06ed0fbe 100644 --- a/pkgs/applications/kde/gwenview.nix +++ b/pkgs/applications/kde/gwenview.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, baloo, exiv2, kactivities, kdelibs4support, kio, kipi-plugins, lcms2, libkdcraw, libkipi, phonon, qtimageformats, qtsvg, qtx11extras }: @@ -13,7 +13,7 @@ let license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ baloo kactivities kdelibs4support kio exiv2 lcms2 libkdcraw libkipi phonon qtimageformats qtsvg qtx11extras diff --git a/pkgs/applications/kde/kate.nix b/pkgs/applications/kde/kate.nix index 03cc0e1fe33..cd320afd8d3 100644 --- a/pkgs/applications/kde/kate.nix +++ b/pkgs/applications/kde/kate.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kactivities, kconfig, kcrash, kdbusaddons, kguiaddons, kiconthemes, ki18n, kinit, kio, kitemmodels, kjobwidgets, knewstuff, knotifications, konsole, kparts, ktexteditor, kwindowsystem, kwallet, kxmlgui, libgit2, @@ -15,7 +15,7 @@ let license = with lib.licenses; [ gpl3 lgpl3 lgpl2 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kactivities ki18n kio ktexteditor kwindowsystem plasma-framework qtscript kconfig kcrash kguiaddons kiconthemes kinit kjobwidgets kparts diff --git a/pkgs/applications/kde/kcalc.nix b/pkgs/applications/kde/kcalc.nix index 10164692f77..8ec7591460e 100644 --- a/pkgs/applications/kde/kcalc.nix +++ b/pkgs/applications/kde/kcalc.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kconfig, kconfigwidgets, kguiaddons, kinit, knotifications, gmp }: @@ -12,7 +12,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.fridh ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ gmp kconfig kconfigwidgets kguiaddons kinit knotifications ]; diff --git a/pkgs/applications/kde/kcolorchooser.nix b/pkgs/applications/kde/kcolorchooser.nix index 1dc6ccbc44c..c1266009b68 100644 --- a/pkgs/applications/kde/kcolorchooser.nix +++ b/pkgs/applications/kde/kcolorchooser.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, ki18n, kwidgetsaddons, kxmlgui + extra-cmake-modules, ki18n, kwidgetsaddons, kxmlgui }: let @@ -11,7 +11,7 @@ let license = with lib.licenses; [ mit ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ ki18n kwidgetsaddons kxmlgui ]; }; in diff --git a/pkgs/applications/kde/kcontacts.nix b/pkgs/applications/kde/kcontacts.nix index 441d73d363d..5143df60ef4 100644 --- a/pkgs/applications/kde/kcontacts.nix +++ b/pkgs/applications/kde/kcontacts.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, ki18n, + extra-cmake-modules, ki18n, kcoreaddons, kconfig, kcodecs }: @@ -10,6 +10,6 @@ kdeApp { license = [ lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ki18n ]; + nativeBuildInputs = [ extra-cmake-modules ki18n ]; buildInputs = [ kcoreaddons kconfig kcodecs ]; } diff --git a/pkgs/applications/kde/kde-locale-5.nix b/pkgs/applications/kde/kde-locale-5.nix index 2b9cc0e35eb..772ebe37e44 100644 --- a/pkgs/applications/kde/kde-locale-5.nix +++ b/pkgs/applications/kde/kde-locale-5.nix @@ -1,6 +1,6 @@ name: args: -{ kdeApp, cmake, ecm, gettext, kdoctools }: +{ kdeApp, cmake, extra-cmake-modules, gettext, kdoctools }: kdeApp (args // { sname = "kde-l10n-${name}"; @@ -9,7 +9,7 @@ kdeApp (args // { outputs = [ "out" ]; nativeBuildInputs = - [ cmake ecm gettext kdoctools ] + [ cmake extra-cmake-modules gettext kdoctools ] ++ (args.nativeBuildInputs or []); preConfigure = '' diff --git a/pkgs/applications/kde/kdegraphics-mobipocket.nix b/pkgs/applications/kde/kdegraphics-mobipocket.nix index 984524dc1b2..e50c92f8884 100644 --- a/pkgs/applications/kde/kdegraphics-mobipocket.nix +++ b/pkgs/applications/kde/kdegraphics-mobipocket.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, + extra-cmake-modules, kio }: @@ -10,6 +10,6 @@ kdeApp { license = [ lib.licenses.gpl2Plus ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ kio ]; } diff --git a/pkgs/applications/kde/kdegraphics-thumbnailers.nix b/pkgs/applications/kde/kdegraphics-thumbnailers.nix index c3947226690..5aa974a9c96 100644 --- a/pkgs/applications/kde/kdegraphics-thumbnailers.nix +++ b/pkgs/applications/kde/kdegraphics-thumbnailers.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, kio, libkexiv2, libkdcraw + extra-cmake-modules, kio, libkexiv2, libkdcraw }: kdeApp { @@ -9,6 +9,6 @@ kdeApp { license = [ lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kio libkexiv2 libkdcraw ]; } diff --git a/pkgs/applications/kde/kdenetwork-filesharing.nix b/pkgs/applications/kde/kdenetwork-filesharing.nix index 4aa11967528..20f81563c3b 100644 --- a/pkgs/applications/kde/kdenetwork-filesharing.nix +++ b/pkgs/applications/kde/kdenetwork-filesharing.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kcoreaddons, ki18n, kio, kwidgetsaddons, samba }: @@ -10,6 +10,6 @@ kdeApp { license = [ lib.licenses.gpl2 lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcoreaddons ki18n kio kwidgetsaddons samba ]; } diff --git a/pkgs/applications/kde/kdf.nix b/pkgs/applications/kde/kdf.nix index c73eadc1df4..97e74eb2e12 100644 --- a/pkgs/applications/kde/kdf.nix +++ b/pkgs/applications/kde/kdf.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kcmutils }: @@ -12,7 +12,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.peterhoeg ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcmutils ]; diff --git a/pkgs/applications/kde/kgpg.nix b/pkgs/applications/kde/kgpg.nix index cd462acdf2b..c4428598229 100644 --- a/pkgs/applications/kde/kgpg.nix +++ b/pkgs/applications/kde/kgpg.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, kdoctools, ki18n, + extra-cmake-modules, kdoctools, ki18n, akonadi-contacts, gpgme, karchive, kcodecs, kcontacts, kcoreaddons, kcrash, kdbusaddons, kiconthemes, kjobwidgets, kio, knotifications, kservice, ktextwidgets, kxmlgui, kwidgetsaddons, kwindowsystem @@ -8,7 +8,7 @@ kdeApp { name = "kgpg"; - nativeBuildInputs = [ ecm kdoctools ki18n ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ki18n ]; buildInputs = [ akonadi-contacts gpgme karchive kcodecs kcontacts kcoreaddons kcrash kdbusaddons kiconthemes kjobwidgets kio knotifications kservice ktextwidgets kxmlgui diff --git a/pkgs/applications/kde/khelpcenter.nix b/pkgs/applications/kde/khelpcenter.nix index 3f13d131c77..0579faa72a0 100644 --- a/pkgs/applications/kde/khelpcenter.nix +++ b/pkgs/applications/kde/khelpcenter.nix @@ -1,6 +1,6 @@ { kdeApp, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, grantlee, kconfig, kcoreaddons, kdbusaddons, ki18n, kinit, kcmutils, kdelibs4support, khtml, kservice, xapian }: @@ -9,7 +9,7 @@ let unwrapped = kdeApp { name = "khelpcenter"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ grantlee kdelibs4support khtml ki18n kconfig kcoreaddons kdbusaddons kinit kcmutils kservice xapian diff --git a/pkgs/applications/kde/kig.nix b/pkgs/applications/kde/kig.nix index 9636f82974b..9f38079316f 100644 --- a/pkgs/applications/kde/kig.nix +++ b/pkgs/applications/kde/kig.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper - , ecm, kdoctools, kparts + , extra-cmake-modules, kdoctools, kparts , qtsvg, qtxmlpatterns, ktexteditor, boost }: @@ -12,7 +12,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ raskin ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ kparts qtsvg qtxmlpatterns ktexteditor boost ]; diff --git a/pkgs/applications/kde/kio-extras.nix b/pkgs/applications/kde/kio-extras.nix index fe3e3fad200..77f795167fc 100644 --- a/pkgs/applications/kde/kio-extras.nix +++ b/pkgs/applications/kde/kio-extras.nix @@ -1,5 +1,5 @@ { - kdeApp, lib, ecm, kdoctools, shared_mime_info, + kdeApp, lib, extra-cmake-modules, kdoctools, shared_mime_info, exiv2, kactivities, karchive, kbookmarks, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kguiaddons, kdnssd, kiconthemes, ki18n, kio, khtml, kdelibs4support, kpty, libmtp, libssh, openexr, ilmbase, openslp, phonon, @@ -12,7 +12,7 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools shared_mime_info ]; propagatedBuildInputs = [ exiv2 kactivities karchive kbookmarks kconfig kconfigwidgets kcoreaddons kdbusaddons kguiaddons kdnssd kiconthemes ki18n kio khtml kdelibs4support diff --git a/pkgs/applications/kde/kmime.nix b/pkgs/applications/kde/kmime.nix index d60909ec7bc..c17b3fdcd8e 100644 --- a/pkgs/applications/kde/kmime.nix +++ b/pkgs/applications/kde/kmime.nix @@ -1,6 +1,6 @@ { kdeApp, lib, - ecm, ki18n, + extra-cmake-modules, ki18n, kcodecs }: @@ -10,6 +10,6 @@ kdeApp { license = [ lib.licenses.lgpl21 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ki18n ]; + nativeBuildInputs = [ extra-cmake-modules ki18n ]; buildInputs = [ kcodecs ]; } diff --git a/pkgs/applications/kde/kmix.nix b/pkgs/applications/kde/kmix.nix index 46a67e06ee0..6ab653cfce0 100644 --- a/pkgs/applications/kde/kmix.nix +++ b/pkgs/applications/kde/kmix.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kglobalaccel, kxmlgui, kcoreaddons, kdelibs4support, plasma-framework, libpulseaudio, alsaLib, libcanberra_kde }: @@ -13,7 +13,7 @@ let license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = [ lib.maintainers.rongcuid ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ libpulseaudio alsaLib libcanberra_kde ]; propagatedBuildInputs = [ kglobalaccel kxmlgui kcoreaddons kdelibs4support diff --git a/pkgs/applications/kde/kompare.nix b/pkgs/applications/kde/kompare.nix index 45789edbfcc..660090dc84a 100644 --- a/pkgs/applications/kde/kompare.nix +++ b/pkgs/applications/kde/kompare.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kparts, ktexteditor, kwidgetsaddons, libkomparediff2 }: @@ -9,7 +9,7 @@ let kdeApp { name = "kompare"; meta = { license = with lib.licenses; [ gpl2 ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kparts ktexteditor kwidgetsaddons libkomparediff2 ]; diff --git a/pkgs/applications/kde/konsole.nix b/pkgs/applications/kde/konsole.nix index 2dfd305b46b..15b6373bdb0 100644 --- a/pkgs/applications/kde/konsole.nix +++ b/pkgs/applications/kde/konsole.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kbookmarks, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kguiaddons, ki18n, kiconthemes, kinit, kdelibs4support, kio, knotifications, knotifyconfig, kparts, kpty, kservice, ktextwidgets, kwidgetsaddons, @@ -15,7 +15,7 @@ let license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kdelibs4support ki18n kwindowsystem qtscript kbookmarks kcompletion kconfig kconfigwidgets kcoreaddons kguiaddons kiconthemes kinit kio diff --git a/pkgs/applications/kde/kwalletmanager.nix b/pkgs/applications/kde/kwalletmanager.nix index 03c2ab3853a..afa870d90a5 100644 --- a/pkgs/applications/kde/kwalletmanager.nix +++ b/pkgs/applications/kde/kwalletmanager.nix @@ -1,7 +1,7 @@ { lib , kdeApp , kdeWrapper -, ecm +, extra-cmake-modules , kdoctools , kauth , kcmutils @@ -19,7 +19,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ fridh ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kauth kcmutils diff --git a/pkgs/applications/kde/libkdcraw.nix b/pkgs/applications/kde/libkdcraw.nix index 421f7dbb4cf..179e9f414dc 100644 --- a/pkgs/applications/kde/libkdcraw.nix +++ b/pkgs/applications/kde/libkdcraw.nix @@ -1,4 +1,4 @@ -{ kdeApp, lib, ecm, libraw }: +{ kdeApp, lib, extra-cmake-modules, libraw, qtbase }: kdeApp { name = "libkdcraw"; @@ -6,6 +6,7 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 bsd3 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ libraw ]; } diff --git a/pkgs/applications/kde/libkexiv2.nix b/pkgs/applications/kde/libkexiv2.nix index 0fac0759ab6..0991c5df5ab 100644 --- a/pkgs/applications/kde/libkexiv2.nix +++ b/pkgs/applications/kde/libkexiv2.nix @@ -1,4 +1,4 @@ -{ kdeApp, lib, exiv2, ecm }: +{ kdeApp, lib, exiv2, extra-cmake-modules, qtbase }: kdeApp { name = "libkexiv2"; @@ -6,6 +6,7 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 bsd3 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ exiv2 ]; } diff --git a/pkgs/applications/kde/libkipi.nix b/pkgs/applications/kde/libkipi.nix index fa9dcc8323d..32eeb171ff8 100644 --- a/pkgs/applications/kde/libkipi.nix +++ b/pkgs/applications/kde/libkipi.nix @@ -1,4 +1,4 @@ -{ kdeApp, lib, ecm, kconfig, ki18n, kservice, kxmlgui }: +{ kdeApp, lib, extra-cmake-modules, kconfig, ki18n, kservice, kxmlgui }: kdeApp { name = "libkipi"; @@ -6,6 +6,6 @@ kdeApp { license = with lib.licenses; [ gpl2 lgpl21 bsd3 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kconfig ki18n kservice kxmlgui ]; } diff --git a/pkgs/applications/kde/libkomparediff2.nix b/pkgs/applications/kde/libkomparediff2.nix index 91b469fed3c..aacc89a0efe 100644 --- a/pkgs/applications/kde/libkomparediff2.nix +++ b/pkgs/applications/kde/libkomparediff2.nix @@ -1,7 +1,7 @@ -{ kdeApp, lib, ecm, ki18n, kxmlgui, kcodecs, kio }: +{ kdeApp, lib, extra-cmake-modules, ki18n, kxmlgui, kcodecs, kio }: kdeApp { name = "libkomparediff2"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcodecs ki18n kxmlgui kio ]; } diff --git a/pkgs/applications/kde/marble.nix b/pkgs/applications/kde/marble.nix index 5b8a82dbf09..c151396f247 100644 --- a/pkgs/applications/kde/marble.nix +++ b/pkgs/applications/kde/marble.nix @@ -1,5 +1,5 @@ { kdeApp, lib, kdeWrapper -, ecm, qtscript, qtsvg, qtquickcontrols +, extra-cmake-modules, qtscript, qtsvg, qtquickcontrols , gpsd }: @@ -9,7 +9,7 @@ let name = "marble"; meta.license = with lib.licenses; [ lgpl21 gpl3 ]; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ qtscript qtsvg qtquickcontrols gpsd diff --git a/pkgs/applications/kde/okteta.nix b/pkgs/applications/kde/okteta.nix index 6683b9876fc..59520e28532 100644 --- a/pkgs/applications/kde/okteta.nix +++ b/pkgs/applications/kde/okteta.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kconfig, kinit, kcmutils, kconfigwidgets, knewstuff, kparts, qca-qt5 }: @@ -13,7 +13,7 @@ let license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ peterhoeg ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kinit kcmutils kconfigwidgets knewstuff kparts qca-qt5 diff --git a/pkgs/applications/kde/okular.nix b/pkgs/applications/kde/okular.nix index 499e8cc9368..f5b3e38ca7c 100644 --- a/pkgs/applications/kde/okular.nix +++ b/pkgs/applications/kde/okular.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, djvulibre, ebook_tools, kactivities, karchive, kbookmarks, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kdegraphics-mobipocket, kiconthemes, kjs, khtml, kio, kparts, kpty, kwallet, kwindowsystem, libkexiv2, @@ -10,7 +10,7 @@ let unwrapped = kdeApp { name = "okular"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ djvulibre ebook_tools kactivities karchive kbookmarks kcompletion kconfig kconfigwidgets kcoreaddons kdbusaddons kdegraphics-mobipocket kiconthemes diff --git a/pkgs/applications/kde/print-manager.nix b/pkgs/applications/kde/print-manager.nix index c4a82780b44..0a3d311eb27 100644 --- a/pkgs/applications/kde/print-manager.nix +++ b/pkgs/applications/kde/print-manager.nix @@ -1,5 +1,5 @@ { - kdeApp, lib, ecm, + kdeApp, lib, extra-cmake-modules, cups, kconfig, kconfigwidgets, kdbusaddons, kiconthemes, ki18n, kcmutils, kio, knotifications, kwidgetsaddons, kwindowsystem, kitemviews, plasma-framework, qtdeclarative @@ -11,7 +11,7 @@ kdeApp { license = [ lib.licenses.gpl2 ]; maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ cups kconfig kconfigwidgets kdbusaddons kiconthemes kcmutils knotifications kwidgetsaddons kitemviews ki18n kio kwindowsystem plasma-framework diff --git a/pkgs/applications/kde/spectacle.nix b/pkgs/applications/kde/spectacle.nix index 4c3a5246b2e..30abfc23e83 100644 --- a/pkgs/applications/kde/spectacle.nix +++ b/pkgs/applications/kde/spectacle.nix @@ -1,6 +1,6 @@ { kdeApp, lib, kdeWrapper, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kconfig, kcoreaddons, kdbusaddons, kdeclarative, ki18n, kio, kipi-plugins, knotifications, kscreen, kwidgetsaddons, kwindowsystem, kxmlgui, libkipi, xcb-util-cursor @@ -11,7 +11,7 @@ let kdeApp { name = "spectacle"; meta = with lib; { maintainers = with maintainers; [ ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kcoreaddons kdbusaddons kdeclarative ki18n kio knotifications kscreen kwidgetsaddons kwindowsystem kxmlgui libkipi xcb-util-cursor diff --git a/pkgs/applications/misc/krename/default.nix b/pkgs/applications/misc/krename/default.nix index a2137060ef6..8ce74850e1a 100644 --- a/pkgs/applications/misc/krename/default.nix +++ b/pkgs/applications/misc/krename/default.nix @@ -1,6 +1,6 @@ { kdeDerivation, kdeWrapper, fetchFromGitHub, lib, - ecm, kdoctools, kconfig, kinit, kjsembed, + extra-cmake-modules, kdoctools, kconfig, kinit, kjsembed, taglib, exiv2, podofo }: @@ -25,7 +25,7 @@ let }; buildInputs = [ taglib exiv2 podofo ]; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kinit kjsembed ]; }; diff --git a/pkgs/applications/misc/yakuake/default.nix b/pkgs/applications/misc/yakuake/default.nix index 8bce26deefc..0d9f3834c61 100644 --- a/pkgs/applications/misc/yakuake/default.nix +++ b/pkgs/applications/misc/yakuake/default.nix @@ -3,7 +3,7 @@ , fetchurl , kdoctools , kdeWrapper -, ecm +, extra-cmake-modules , karchive , kcrash , kdbusaddons @@ -43,7 +43,7 @@ let ]; nativeBuildInputs = [ - ecm kdoctools + extra-cmake-modules kdoctools ]; meta = { diff --git a/pkgs/applications/networking/irc/konversation/default.nix b/pkgs/applications/networking/irc/konversation/default.nix index 9724ae5f4bf..6f4bc2af79f 100644 --- a/pkgs/applications/networking/irc/konversation/default.nix +++ b/pkgs/applications/networking/irc/konversation/default.nix @@ -1,7 +1,7 @@ { kdeDerivation , lib , fetchurl -, ecm +, extra-cmake-modules , kbookmarks , karchive , kconfig @@ -64,7 +64,7 @@ let ]; nativeBuildInputs = [ - ecm + extra-cmake-modules kdoctools ]; diff --git a/pkgs/applications/networking/p2p/ktorrent/default.nix b/pkgs/applications/networking/p2p/ktorrent/default.nix index 7e47838c4f9..73cd26b2a6e 100644 --- a/pkgs/applications/networking/p2p/ktorrent/default.nix +++ b/pkgs/applications/networking/p2p/ktorrent/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, cmake -, ecm, qtbase, qtscript +, extra-cmake-modules, qtbase, qtscript , ki18n, kio, knotifications, knotifyconfig, kdoctools, kross, kcmutils, kdelibs4support , libktorrent, boost, taglib }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { }) ]; - nativeBuildInputs = [ kdoctools ecm ]; + nativeBuildInputs = [ kdoctools extra-cmake-modules ]; buildInputs = [ cmake qtbase qtscript diff --git a/pkgs/applications/networking/sniffers/wireshark/default.nix b/pkgs/applications/networking/sniffers/wireshark/default.nix index 7315b84d7f3..fd709aa7660 100644 --- a/pkgs/applications/networking/sniffers/wireshark/default.nix +++ b/pkgs/applications/networking/sniffers/wireshark/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl, pkgconfig, pcre, perl, flex, bison, gettext, libpcap, libnl, c-ares , gnutls, libgcrypt, libgpgerror, geoip, openssl, lua5, makeDesktopItem, python, libcap, glib -, libssh, zlib, cmake, ecm +, libssh, zlib, cmake, extra-cmake-modules , withGtk ? false, gtk3 ? null, pango ? null, cairo ? null, gdk_pixbuf ? null , withQt ? false, qt5 ? null , ApplicationServices, SystemConfiguration, gmp @@ -24,7 +24,7 @@ in stdenv.mkDerivation { }; buildInputs = [ - bison cmake ecm flex gettext pcre perl pkgconfig libpcap lua5 libssh openssl libgcrypt libgpgerror gnutls + bison cmake extra-cmake-modules flex gettext pcre perl pkgconfig libpcap lua5 libssh openssl libgcrypt libgpgerror gnutls geoip c-ares python glib zlib ] ++ (optionals withQt (with qt5; [ qtbase qtmultimedia qtsvg qttools ])) ++ (optionals withGtk [ gtk3 pango cairo gdk_pixbuf ]) diff --git a/pkgs/applications/office/skrooge/default.nix b/pkgs/applications/office/skrooge/default.nix index 42cc9b0c6eb..acf60bd0375 100644 --- a/pkgs/applications/office/skrooge/default.nix +++ b/pkgs/applications/office/skrooge/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, ecm, makeQtWrapper, qtwebkit, qtscript, grantlee, +{ stdenv, fetchurl, cmake, extra-cmake-modules, makeQtWrapper, qtwebkit, qtscript, grantlee, kxmlgui, kwallet, kparts, kdoctools, kjobwidgets, kdesignerplugin, kiconthemes, knewstuff, sqlcipher, qca-qt5, kdelibs4support, kactivities, knotifyconfig, krunner, libofx }: @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { sha256 = "1xrh9nal122rzlv4m0x8qah6zpqb6891al3351piarpk2xgjgj4x"; }; - nativeBuildInputs = [ cmake ecm makeQtWrapper ]; + nativeBuildInputs = [ cmake extra-cmake-modules makeQtWrapper ]; buildInputs = [ qtwebkit qtscript grantlee kxmlgui kwallet kparts kdoctools kjobwidgets kdesignerplugin kiconthemes knewstuff sqlcipher qca-qt5 diff --git a/pkgs/desktops/plasma-5/bluedevil.nix b/pkgs/desktops/plasma-5/bluedevil.nix index 1deef241a62..d0e78499813 100644 --- a/pkgs/desktops/plasma-5/bluedevil.nix +++ b/pkgs/desktops/plasma-5/bluedevil.nix @@ -1,12 +1,12 @@ { - plasmaPackage, ecm, shared_mime_info, + plasmaPackage, extra-cmake-modules, shared_mime_info, bluez-qt, kcoreaddons, kdbusaddons, kded, ki18n, kiconthemes, kio, knotifications, kwidgetsaddons, kwindowsystem, plasma-framework, qtdeclarative }: plasmaPackage { name = "bluedevil"; - nativeBuildInputs = [ ecm shared_mime_info ]; + nativeBuildInputs = [ extra-cmake-modules shared_mime_info ]; propagatedBuildInputs = [ bluez-qt ki18n kio kwindowsystem plasma-framework qtdeclarative kcoreaddons kdbusaddons kded kiconthemes knotifications kwidgetsaddons diff --git a/pkgs/desktops/plasma-5/breeze-gtk.nix b/pkgs/desktops/plasma-5/breeze-gtk.nix index 57de2fa2d47..4048d98431d 100644 --- a/pkgs/desktops/plasma-5/breeze-gtk.nix +++ b/pkgs/desktops/plasma-5/breeze-gtk.nix @@ -1,9 +1,11 @@ { plasmaPackage -, ecm +, extra-cmake-modules +, qtbase }: plasmaPackage { name = "breeze-gtk"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; cmakeFlags = [ "-DWITH_GTK3_VERSION=3.20" ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/desktops/plasma-5/breeze-plymouth/default.nix b/pkgs/desktops/plasma-5/breeze-plymouth/default.nix index 0de1ca1f680..dfbdf48165a 100644 --- a/pkgs/desktops/plasma-5/breeze-plymouth/default.nix +++ b/pkgs/desktops/plasma-5/breeze-plymouth/default.nix @@ -1,12 +1,12 @@ { plasmaPackage, lib, copyPathsToStore, - ecm, + extra-cmake-modules, plymouth }: plasmaPackage { name = "breeze-plymouth"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ plymouth ]; outputs = [ "out" ]; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); diff --git a/pkgs/desktops/plasma-5/breeze-qt5.nix b/pkgs/desktops/plasma-5/breeze-qt5.nix index ea2776a13c5..a1b64a4656c 100644 --- a/pkgs/desktops/plasma-5/breeze-qt5.nix +++ b/pkgs/desktops/plasma-5/breeze-qt5.nix @@ -1,6 +1,6 @@ { plasmaPackage, - ecm, + extra-cmake-modules, frameworkintegration, kcmutils, kconfigwidgets, kcoreaddons, kdecoration, kguiaddons, ki18n, kwayland, kwindowsystem, plasma-framework, qtx11extras }: @@ -8,7 +8,7 @@ plasmaPackage { name = "breeze-qt5"; sname = "breeze"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ frameworkintegration kcmutils kconfigwidgets kcoreaddons kdecoration kguiaddons ki18n kwayland kwindowsystem plasma-framework qtx11extras diff --git a/pkgs/desktops/plasma-5/kactivitymanagerd.nix b/pkgs/desktops/plasma-5/kactivitymanagerd.nix index bb90fd6d3ab..282e58ecf9e 100644 --- a/pkgs/desktops/plasma-5/kactivitymanagerd.nix +++ b/pkgs/desktops/plasma-5/kactivitymanagerd.nix @@ -1,12 +1,12 @@ { plasmaPackage -, ecm +, extra-cmake-modules , boost, kconfig, kcoreaddons, kdbusaddons, ki18n, kio, kglobalaccel , kwindowsystem, kxmlgui }: plasmaPackage { name = "kactivitymanagerd"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ boost kconfig kcoreaddons kdbusaddons kglobalaccel ki18n kio kwindowsystem kxmlgui diff --git a/pkgs/desktops/plasma-5/kde-cli-tools.nix b/pkgs/desktops/plasma-5/kde-cli-tools.nix index 33a7340cb85..87a46703997 100644 --- a/pkgs/desktops/plasma-5/kde-cli-tools.nix +++ b/pkgs/desktops/plasma-5/kde-cli-tools.nix @@ -1,12 +1,12 @@ { - plasmaPackage, ecm, + plasmaPackage, extra-cmake-modules, kcmutils, kconfig, kdelibs4support, kdesu, kdoctools, ki18n, kiconthemes, kwindowsystem, qtsvg, qtx11extras }: plasmaPackage { name = "kde-cli-tools"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcmutils kconfig kdesu kdelibs4support ki18n kiconthemes kwindowsystem qtsvg qtx11extras diff --git a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix index 10e55f0d698..f482f2a6a3f 100644 --- a/pkgs/desktops/plasma-5/kde-gtk-config/default.nix +++ b/pkgs/desktops/plasma-5/kde-gtk-config/default.nix @@ -1,5 +1,5 @@ { plasmaPackage -, ecm +, extra-cmake-modules , glib , gtk2 , gtk3 @@ -15,7 +15,7 @@ plasmaPackage { name = "kde-gtk-config"; patches = [ ./0001-follow-symlinks.patch ]; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ ki18n kio glib gtk2 gtk3 karchive kcmutils kconfigwidgets kiconthemes knewstuff diff --git a/pkgs/desktops/plasma-5/kdecoration.nix b/pkgs/desktops/plasma-5/kdecoration.nix index a0f9d93e60b..546f72c3f38 100644 --- a/pkgs/desktops/plasma-5/kdecoration.nix +++ b/pkgs/desktops/plasma-5/kdecoration.nix @@ -1,6 +1,7 @@ -{ plasmaPackage, ecm }: +{ plasmaPackage, extra-cmake-modules, qtbase }: plasmaPackage { name = "kdecoration"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/desktops/plasma-5/kdeplasma-addons.nix b/pkgs/desktops/plasma-5/kdeplasma-addons.nix index a2805f5d804..3371e17beaf 100644 --- a/pkgs/desktops/plasma-5/kdeplasma-addons.nix +++ b/pkgs/desktops/plasma-5/kdeplasma-addons.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, ecm, kdoctools +{ plasmaPackage, extra-cmake-modules, kdoctools , kconfig, kconfigwidgets, kcoreaddons, kcmutils, kdelibs4support, ki18n , kio, knewstuff, kross, krunner, kservice, ksysguard, kunitconversion , plasma-framework, plasma-workspace, qtdeclarative, qtx11extras @@ -8,7 +8,7 @@ plasmaPackage { name = "kdeplasma-addons"; nativeBuildInputs = [ - ecm + extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ diff --git a/pkgs/desktops/plasma-5/kgamma5.nix b/pkgs/desktops/plasma-5/kgamma5.nix index 70d7cc17a1c..965c33e6eef 100644 --- a/pkgs/desktops/plasma-5/kgamma5.nix +++ b/pkgs/desktops/plasma-5/kgamma5.nix @@ -1,9 +1,9 @@ -{ plasmaPackage, ecm, kdoctools, kdelibs4support +{ plasmaPackage, extra-cmake-modules, kdoctools, kdelibs4support , qtx11extras }: plasmaPackage { name = "kgamma5"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kdelibs4support qtx11extras ]; } diff --git a/pkgs/desktops/plasma-5/khotkeys.nix b/pkgs/desktops/plasma-5/khotkeys.nix index f23a17e5479..5360f6cf0b7 100644 --- a/pkgs/desktops/plasma-5/khotkeys.nix +++ b/pkgs/desktops/plasma-5/khotkeys.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, ecm, kdoctools, kcmutils +{ plasmaPackage, extra-cmake-modules, kdoctools, kcmutils , kdbusaddons, kdelibs4support, kglobalaccel, ki18n, kio, kxmlgui , plasma-framework, plasma-workspace, qtx11extras , fetchpatch @@ -6,7 +6,7 @@ plasmaPackage { name = "khotkeys"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; patches = [ # Patch is in 5.9 and up. diff --git a/pkgs/desktops/plasma-5/kinfocenter.nix b/pkgs/desktops/plasma-5/kinfocenter.nix index 939e4fa62a9..b4c8dc99adc 100644 --- a/pkgs/desktops/plasma-5/kinfocenter.nix +++ b/pkgs/desktops/plasma-5/kinfocenter.nix @@ -1,6 +1,6 @@ { plasmaPackage, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kcmutils, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kdeclarative, kdelibs4support, ki18n, kiconthemes, kio, kpackage, kservice, kwayland, kwidgetsaddons, kxmlgui, libraw1394, mesa_glu, pciutils, solid @@ -8,7 +8,7 @@ plasmaPackage { name = "kinfocenter"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcmutils kcompletion kconfig kconfigwidgets kcoreaddons kdbusaddons kdeclarative kdelibs4support ki18n kiconthemes kio kpackage kservice diff --git a/pkgs/desktops/plasma-5/kmenuedit.nix b/pkgs/desktops/plasma-5/kmenuedit.nix index f10bf6bb3cd..a27dc5dd92a 100644 --- a/pkgs/desktops/plasma-5/kmenuedit.nix +++ b/pkgs/desktops/plasma-5/kmenuedit.nix @@ -1,13 +1,13 @@ { plasmaPackage, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kdbusaddons, kdelibs4support, khotkeys, ki18n, kiconthemes, kio, kxmlgui, sonnet }: plasmaPackage { name = "kmenuedit"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kdbusaddons kdelibs4support khotkeys ki18n kiconthemes kio kxmlgui sonnet ]; diff --git a/pkgs/desktops/plasma-5/kscreen.nix b/pkgs/desktops/plasma-5/kscreen.nix index ecbd88c2146..e0fbea5d746 100644 --- a/pkgs/desktops/plasma-5/kscreen.nix +++ b/pkgs/desktops/plasma-5/kscreen.nix @@ -1,11 +1,11 @@ -{ plasmaPackage, ecm, kconfig, kconfigwidgets +{ plasmaPackage, extra-cmake-modules, kconfig, kconfigwidgets , kdbusaddons, kglobalaccel, ki18n, kwidgetsaddons, kxmlgui , libkscreen, qtdeclarative, qtgraphicaleffects }: plasmaPackage { name = "kscreen"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kglobalaccel ki18n libkscreen qtdeclarative qtgraphicaleffects kconfig kconfigwidgets kdbusaddons kwidgetsaddons kxmlgui diff --git a/pkgs/desktops/plasma-5/kscreenlocker.nix b/pkgs/desktops/plasma-5/kscreenlocker.nix index 3c5d7b37472..3551feab76f 100644 --- a/pkgs/desktops/plasma-5/kscreenlocker.nix +++ b/pkgs/desktops/plasma-5/kscreenlocker.nix @@ -1,13 +1,13 @@ { plasmaPackage, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kcmutils, kcrash, kdeclarative, kdelibs4support, kglobalaccel, kidletime, kwayland, libXcursor, pam, plasma-framework, qtdeclarative, wayland }: plasmaPackage { name = "kscreenlocker"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcmutils kcrash kdeclarative kdelibs4support kglobalaccel kidletime kwayland libXcursor pam plasma-framework qtdeclarative wayland diff --git a/pkgs/desktops/plasma-5/ksshaskpass.nix b/pkgs/desktops/plasma-5/ksshaskpass.nix index 80b529a6668..f1a6b82ae93 100644 --- a/pkgs/desktops/plasma-5/ksshaskpass.nix +++ b/pkgs/desktops/plasma-5/ksshaskpass.nix @@ -1,9 +1,9 @@ -{ plasmaPackage, ecm, kdoctools, kcoreaddons +{ plasmaPackage, extra-cmake-modules, kdoctools, kcoreaddons , ki18n, kwallet, kwidgetsaddons }: plasmaPackage { name = "ksshaskpass"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcoreaddons ki18n kwallet kwidgetsaddons ]; } diff --git a/pkgs/desktops/plasma-5/ksysguard.nix b/pkgs/desktops/plasma-5/ksysguard.nix index f7e5cced708..366b154cae7 100644 --- a/pkgs/desktops/plasma-5/ksysguard.nix +++ b/pkgs/desktops/plasma-5/ksysguard.nix @@ -1,6 +1,6 @@ { plasmaPackage, - ecm, kdoctools, + extra-cmake-modules, kdoctools, lm_sensors, kconfig, kcoreaddons, kdelibs4support, ki18n, kiconthemes, kitemviews, knewstuff, libksysguard, qtwebkit @@ -8,7 +8,7 @@ plasmaPackage { name = "ksysguard"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ lm_sensors ]; propagatedBuildInputs = [ kconfig kcoreaddons kitemviews knewstuff kiconthemes libksysguard diff --git a/pkgs/desktops/plasma-5/kwallet-pam.nix b/pkgs/desktops/plasma-5/kwallet-pam.nix index 86ba52292f9..2789499c50a 100644 --- a/pkgs/desktops/plasma-5/kwallet-pam.nix +++ b/pkgs/desktops/plasma-5/kwallet-pam.nix @@ -1,10 +1,10 @@ -{ plasmaPackage, ecm, pam, socat, libgcrypt +{ plasmaPackage, extra-cmake-modules, pam, socat, libgcrypt }: plasmaPackage { name = "kwallet-pam"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ pam socat libgcrypt ]; diff --git a/pkgs/desktops/plasma-5/kwayland-integration.nix b/pkgs/desktops/plasma-5/kwayland-integration.nix index 376e8ed7cbd..9045227a51a 100644 --- a/pkgs/desktops/plasma-5/kwayland-integration.nix +++ b/pkgs/desktops/plasma-5/kwayland-integration.nix @@ -1,5 +1,5 @@ { plasmaPackage -, ecm +, extra-cmake-modules , kidletime , kwayland , kwindowsystem @@ -8,7 +8,7 @@ plasmaPackage { name = "kwayland-integration"; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; propagatedBuildInputs = [ kidletime kwindowsystem kwayland diff --git a/pkgs/desktops/plasma-5/kwin/default.nix b/pkgs/desktops/plasma-5/kwin/default.nix index 73e40cdb114..3555cf91e00 100644 --- a/pkgs/desktops/plasma-5/kwin/default.nix +++ b/pkgs/desktops/plasma-5/kwin/default.nix @@ -1,6 +1,6 @@ { plasmaPackage, lib, copyPathsToStore, - ecm, kdoctools, + extra-cmake-modules, kdoctools, breeze-qt5, epoxy, kactivities, kcompletion, kcmutils, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdeclarative, kdecoration, kglobalaccel, ki18n, kiconthemes, kidletime, kinit, kio, knewstuff, knotifications, @@ -12,7 +12,7 @@ plasmaPackage { name = "kwin"; nativeBuildInputs = [ - ecm + extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ diff --git a/pkgs/desktops/plasma-5/kwrited.nix b/pkgs/desktops/plasma-5/kwrited.nix index 8dd814f783d..29498e93404 100644 --- a/pkgs/desktops/plasma-5/kwrited.nix +++ b/pkgs/desktops/plasma-5/kwrited.nix @@ -1,9 +1,9 @@ -{ plasmaPackage, ecm, kcoreaddons, ki18n, kpty +{ plasmaPackage, extra-cmake-modules, kcoreaddons, ki18n, kpty , knotifications, kdbusaddons }: plasmaPackage { name = "kwrited"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcoreaddons ki18n kpty knotifications kdbusaddons ]; } diff --git a/pkgs/desktops/plasma-5/libkscreen.nix b/pkgs/desktops/plasma-5/libkscreen.nix index 838ab6ef0e5..4e04fd5ed1d 100644 --- a/pkgs/desktops/plasma-5/libkscreen.nix +++ b/pkgs/desktops/plasma-5/libkscreen.nix @@ -1,5 +1,5 @@ { plasmaPackage -, ecm +, extra-cmake-modules , kwayland, libXrandr , qtx11extras }: @@ -7,7 +7,7 @@ plasmaPackage { name = "libkscreen"; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; propagatedBuildInputs = [ kwayland libXrandr qtx11extras diff --git a/pkgs/desktops/plasma-5/libksysguard/default.nix b/pkgs/desktops/plasma-5/libksysguard/default.nix index 2d81d061f4c..b67e041a782 100644 --- a/pkgs/desktops/plasma-5/libksysguard/default.nix +++ b/pkgs/desktops/plasma-5/libksysguard/default.nix @@ -1,6 +1,6 @@ { plasmaPackage, - ecm, + extra-cmake-modules, kauth, kcompletion, kconfig, kconfigwidgets, kcoreaddons, ki18n, kiconthemes, kservice, kwidgetsaddons, kwindowsystem, plasma-framework, qtscript, qtwebkit, qtx11extras @@ -11,7 +11,7 @@ plasmaPackage { patches = [ ./0001-qdiriterator-follow-symlinks.patch ]; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kauth kconfig ki18n kiconthemes kwindowsystem kcompletion kconfigwidgets kcoreaddons kservice kwidgetsaddons plasma-framework qtscript qtx11extras diff --git a/pkgs/desktops/plasma-5/milou.nix b/pkgs/desktops/plasma-5/milou.nix index dbf9d0b9e53..43f78d9e2a9 100644 --- a/pkgs/desktops/plasma-5/milou.nix +++ b/pkgs/desktops/plasma-5/milou.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, ecm, qtscript, qtdeclarative +{ plasmaPackage, extra-cmake-modules, qtscript, qtdeclarative , kcoreaddons, ki18n, kdeclarative, kservice, plasma-framework , krunner }: @@ -6,7 +6,7 @@ plasmaPackage { name = "milou"; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; propagatedBuildInputs = [ kdeclarative ki18n krunner plasma-framework qtdeclarative qtscript diff --git a/pkgs/desktops/plasma-5/oxygen.nix b/pkgs/desktops/plasma-5/oxygen.nix index ca63c8d7a37..b4ff775264f 100644 --- a/pkgs/desktops/plasma-5/oxygen.nix +++ b/pkgs/desktops/plasma-5/oxygen.nix @@ -1,6 +1,6 @@ { plasmaPackage, kdeWrapper, - ecm, + extra-cmake-modules, frameworkintegration, kcmutils, kcompletion, kconfig, kdecoration, kguiaddons, ki18n, kwidgetsaddons, kservice, kwayland, kwindowsystem, qtx11extras }: @@ -8,7 +8,7 @@ let unwrapped = plasmaPackage { name = "oxygen"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ frameworkintegration kcmutils kcompletion kconfig kdecoration kguiaddons ki18n kservice kwayland kwidgetsaddons kwindowsystem qtx11extras diff --git a/pkgs/desktops/plasma-5/plasma-desktop/default.nix b/pkgs/desktops/plasma-5/plasma-desktop/default.nix index 21ceec25d53..1ac25705730 100644 --- a/pkgs/desktops/plasma-5/plasma-desktop/default.nix +++ b/pkgs/desktops/plasma-5/plasma-desktop/default.nix @@ -1,6 +1,6 @@ { plasmaPackage, lib, copyPathsToStore, - ecm, kdoctools, + extra-cmake-modules, kdoctools, attica, baloo, boost, fontconfig, ibus, kactivities, kactivities-stats, kauth, kcmutils, kdbusaddons, kdeclarative, kded, kdelibs4support, kemoticons, kglobalaccel, ki18n, kitemmodels, knewstuff, knotifications, knotifyconfig, @@ -13,7 +13,7 @@ plasmaPackage rec { name = "plasma-desktop"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ attica boost fontconfig ibus kcmutils kdbusaddons kded kitemmodels knewstuff knotifications knotifyconfig kwallet libcanberra_kde libXcursor diff --git a/pkgs/desktops/plasma-5/plasma-integration.nix b/pkgs/desktops/plasma-5/plasma-integration.nix index e8680fea930..97d30dcd773 100644 --- a/pkgs/desktops/plasma-5/plasma-integration.nix +++ b/pkgs/desktops/plasma-5/plasma-integration.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, ecm +{ plasmaPackage, extra-cmake-modules , breeze-qt5, kconfig, kconfigwidgets, kiconthemes, kio, kwayland , libXcursor }: @@ -8,7 +8,7 @@ plasmaPackage { name = "plasma-integration"; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; buildInputs = [ breeze-qt5 kconfig kconfigwidgets kiconthemes kio kwayland diff --git a/pkgs/desktops/plasma-5/plasma-nm/default.nix b/pkgs/desktops/plasma-5/plasma-nm/default.nix index b6d18dbf91d..da57653bb08 100644 --- a/pkgs/desktops/plasma-5/plasma-nm/default.nix +++ b/pkgs/desktops/plasma-5/plasma-nm/default.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, substituteAll, ecm, kdoctools +{ plasmaPackage, substituteAll, extra-cmake-modules, kdoctools , kcompletion, kconfigwidgets, kcoreaddons, kdbusaddons, kdeclarative , kdelibs4support, ki18n, kiconthemes, kinit, kio, kitemviews , knotifications, kservice, kwallet, kwidgetsaddons, kwindowsystem @@ -15,7 +15,7 @@ plasmaPackage { inherit mobile_broadband_provider_info; }) ]; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kdeclarative kdelibs4support ki18n kio kwindowsystem plasma-framework qtdeclarative kcompletion kconfigwidgets kcoreaddons kdbusaddons kiconthemes diff --git a/pkgs/desktops/plasma-5/plasma-pa.nix b/pkgs/desktops/plasma-5/plasma-pa.nix index 7bf97d745fe..f398e1a9efc 100644 --- a/pkgs/desktops/plasma-5/plasma-pa.nix +++ b/pkgs/desktops/plasma-5/plasma-pa.nix @@ -1,6 +1,6 @@ { plasmaPackage, - ecm, + extra-cmake-modules, gconf, glib, kdoctools, kconfigwidgets, kcoreaddons, kdeclarative, kglobalaccel, ki18n, libcanberra_gtk3, libpulseaudio, plasma-framework }: @@ -8,7 +8,7 @@ plasmaPackage { name = "plasma-pa"; nativeBuildInputs = [ - ecm kdoctools + extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ gconf glib kconfigwidgets kcoreaddons kdeclarative diff --git a/pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix b/pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix index 6ffdb17cbea..8af9caaa579 100644 --- a/pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix +++ b/pkgs/desktops/plasma-5/plasma-workspace-wallpapers.nix @@ -1,11 +1,11 @@ { plasmaPackage -, ecm +, extra-cmake-modules }: plasmaPackage { name = "plasma-workspace-wallpapers"; outputs = [ "out" ]; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; } diff --git a/pkgs/desktops/plasma-5/plasma-workspace/default.nix b/pkgs/desktops/plasma-5/plasma-workspace/default.nix index 1e38c0c74dd..19d530da1a6 100644 --- a/pkgs/desktops/plasma-5/plasma-workspace/default.nix +++ b/pkgs/desktops/plasma-5/plasma-workspace/default.nix @@ -1,7 +1,7 @@ { plasmaPackage, lib, copyPathsToStore, - ecm, kdoctools, + extra-cmake-modules, kdoctools, baloo, kactivities, kcmutils, kconfig, kcrash, kdbusaddons, kdeclarative, kdelibs4support, kdesu, kglobalaccel, kidletime, kjsembed, knewstuff, @@ -14,7 +14,7 @@ plasmaPackage { name = "plasma-workspace"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ baloo kactivities kcmutils kconfig kcrash kdbusaddons kdeclarative kdelibs4support kdesu kglobalaccel kidletime kjsembed knewstuff diff --git a/pkgs/desktops/plasma-5/polkit-kde-agent.nix b/pkgs/desktops/plasma-5/polkit-kde-agent.nix index 002c2bb10ff..1d7d20a7ffb 100644 --- a/pkgs/desktops/plasma-5/polkit-kde-agent.nix +++ b/pkgs/desktops/plasma-5/polkit-kde-agent.nix @@ -1,12 +1,12 @@ { - plasmaPackage, ecm, + plasmaPackage, extra-cmake-modules, kcoreaddons, kconfig, kcrash, kdbusaddons, ki18n, kiconthemes, knotifications, kwidgetsaddons, kwindowsystem, polkit-qt }: plasmaPackage { name = "polkit-kde-agent"; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kdbusaddons kwidgetsaddons kcoreaddons kcrash kconfig ki18n kiconthemes knotifications kwindowsystem polkit-qt diff --git a/pkgs/desktops/plasma-5/powerdevil.nix b/pkgs/desktops/plasma-5/powerdevil.nix index c0c18a6eae6..c3469cc2ebc 100644 --- a/pkgs/desktops/plasma-5/powerdevil.nix +++ b/pkgs/desktops/plasma-5/powerdevil.nix @@ -1,4 +1,4 @@ -{ plasmaPackage, ecm, kdoctools, bluez-qt, kactivities +{ plasmaPackage, extra-cmake-modules, kdoctools, bluez-qt, kactivities , kauth, kconfig, kdbusaddons, kdelibs4support, kglobalaccel, ki18n , kidletime, kio, knotifyconfig, kwayland, libkscreen, networkmanager-qt , plasma-workspace, qtx11extras, solid, udev @@ -6,7 +6,7 @@ plasmaPackage { name = "powerdevil"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kdbusaddons knotifyconfig solid udev bluez-qt kactivities kauth kdelibs4support kglobalaccel ki18n kio kidletime kwayland libkscreen diff --git a/pkgs/desktops/plasma-5/systemsettings.nix b/pkgs/desktops/plasma-5/systemsettings.nix index 407d0e91626..32ea83d9d50 100644 --- a/pkgs/desktops/plasma-5/systemsettings.nix +++ b/pkgs/desktops/plasma-5/systemsettings.nix @@ -1,12 +1,12 @@ { - plasmaPackage, ecm, kdoctools, makeQtWrapper, + plasmaPackage, extra-cmake-modules, kdoctools, makeQtWrapper, kcmutils, kconfig, kdbusaddons, khtml, ki18n, kiconthemes, kio, kitemviews, kservice, kwindowsystem, kxmlgui, qtquickcontrols }: plasmaPackage { name = "systemsettings"; - nativeBuildInputs = [ ecm kdoctools makeQtWrapper ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools makeQtWrapper ]; propagatedBuildInputs = [ kcmutils kconfig kdbusaddons khtml ki18n kiconthemes kio kitemviews kservice kwindowsystem kxmlgui qtquickcontrols diff --git a/pkgs/development/libraries/kde-frameworks/attica.nix b/pkgs/development/libraries/kde-frameworks/attica.nix index d34b3f3a2c5..6533a05b160 100644 --- a/pkgs/development/libraries/kde-frameworks/attica.nix +++ b/pkgs/development/libraries/kde-frameworks/attica.nix @@ -1,7 +1,8 @@ -{ kdeFramework, lib, ecm }: +{ kdeFramework, lib, extra-cmake-modules, qtbase }: kdeFramework { name = "attica"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/baloo.nix b/pkgs/development/libraries/kde-frameworks/baloo.nix index 9c803fdc717..dc7b6af193b 100644 --- a/pkgs/development/libraries/kde-frameworks/baloo.nix +++ b/pkgs/development/libraries/kde-frameworks/baloo.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kauth, kconfig +{ kdeFramework, lib, extra-cmake-modules, kauth, kconfig , kcoreaddons, kcrash, kdbusaddons, kfilemetadata, ki18n, kidletime , kio, lmdb, qtbase, solid }: @@ -6,7 +6,7 @@ kdeFramework { name = "baloo"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kauth kconfig kcoreaddons kcrash kdbusaddons kfilemetadata ki18n kio kidletime lmdb qtbase solid diff --git a/pkgs/development/libraries/kde-frameworks/bluez-qt.nix b/pkgs/development/libraries/kde-frameworks/bluez-qt.nix index 7ab82bdc1ef..93c945b58ca 100644 --- a/pkgs/development/libraries/kde-frameworks/bluez-qt.nix +++ b/pkgs/development/libraries/kde-frameworks/bluez-qt.nix @@ -1,12 +1,12 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , qtdeclarative }: kdeFramework { name = "bluez-qt"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ qtdeclarative ]; preConfigure = '' substituteInPlace CMakeLists.txt \ diff --git a/pkgs/development/libraries/kde-frameworks/breeze-icons.nix b/pkgs/development/libraries/kde-frameworks/breeze-icons.nix index c87ba75b2b4..9a18ade96a8 100644 --- a/pkgs/development/libraries/kde-frameworks/breeze-icons.nix +++ b/pkgs/development/libraries/kde-frameworks/breeze-icons.nix @@ -1,10 +1,10 @@ -{ kdeFramework, lib, ecm, qtsvg }: +{ kdeFramework, lib, extra-cmake-modules, qtsvg }: kdeFramework { name = "breeze-icons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; outputs = [ "out" ]; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ qtsvg ]; propagatedUserEnvPkgs = [ qtsvg.out ]; } diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index 00965bd0a58..2906dc78886 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -24,87 +24,89 @@ existing packages here and modify it as necessary. */ -{ newScope, kdeDerivation, lib, fetchurl }: +{ libsForQt5, kdeDerivation, lib, fetchurl }: let - callPackage = newScope { - kdeFramework = import ./build-support/framework.nix { - inherit kdeDerivation lib fetchurl; + packages = self: with self; + let + callPackage = self.newScope { + kdeFramework = import ./build-support/framework.nix { + inherit kdeDerivation lib fetchurl; + }; + }; + in { + attica = callPackage ./attica.nix {}; + baloo = callPackage ./baloo.nix {}; + bluez-qt = callPackage ./bluez-qt.nix {}; + breeze-icons = callPackage ./breeze-icons.nix {}; + extra-cmake-modules = callPackage ./extra-cmake-modules {}; + frameworkintegration = callPackage ./frameworkintegration.nix {}; + kactivities = callPackage ./kactivities.nix {}; + kactivities-stats = callPackage ./kactivities-stats.nix {}; + kapidox = callPackage ./kapidox.nix {}; + karchive = callPackage ./karchive.nix {}; + kauth = callPackage ./kauth {}; + kbookmarks = callPackage ./kbookmarks.nix {}; + kcmutils = callPackage ./kcmutils {}; + kcodecs = callPackage ./kcodecs.nix {}; + kcompletion = callPackage ./kcompletion.nix {}; + kconfig = callPackage ./kconfig.nix {}; + kconfigwidgets = callPackage ./kconfigwidgets {}; + kcoreaddons = callPackage ./kcoreaddons.nix {}; + kcrash = callPackage ./kcrash.nix {}; + kdbusaddons = callPackage ./kdbusaddons.nix {}; + kdeclarative = callPackage ./kdeclarative.nix {}; + kded = callPackage ./kded.nix {}; + kdelibs4support = callPackage ./kdelibs4support {}; + kdesignerplugin = callPackage ./kdesignerplugin.nix {}; + kdesu = callPackage ./kdesu.nix {}; + kdnssd = callPackage ./kdnssd.nix {}; + kdoctools = callPackage ./kdoctools {}; + kemoticons = callPackage ./kemoticons.nix {}; + kfilemetadata = callPackage ./kfilemetadata {}; + kglobalaccel = callPackage ./kglobalaccel.nix {}; + kguiaddons = callPackage ./kguiaddons.nix {}; + khtml = callPackage ./khtml.nix {}; + ki18n = callPackage ./ki18n.nix {}; + kiconthemes = callPackage ./kiconthemes {}; + kidletime = callPackage ./kidletime.nix {}; + kimageformats = callPackage ./kimageformats.nix {}; + kinit = callPackage ./kinit {}; + kio = callPackage ./kio {}; + kitemmodels = callPackage ./kitemmodels.nix {}; + kitemviews = callPackage ./kitemviews.nix {}; + kjobwidgets = callPackage ./kjobwidgets.nix {}; + kjs = callPackage ./kjs.nix {}; + kjsembed = callPackage ./kjsembed.nix {}; + kmediaplayer = callPackage ./kmediaplayer.nix {}; + knewstuff = callPackage ./knewstuff.nix {}; + knotifications = callPackage ./knotifications.nix {}; + knotifyconfig = callPackage ./knotifyconfig.nix {}; + kpackage = callPackage ./kpackage {}; + kparts = callPackage ./kparts.nix {}; + kpeople = callPackage ./kpeople.nix {}; + kplotting = callPackage ./kplotting.nix {}; + kpty = callPackage ./kpty.nix {}; + kross = callPackage ./kross.nix {}; + krunner = callPackage ./krunner.nix {}; + kservice = callPackage ./kservice {}; + ktexteditor = callPackage ./ktexteditor.nix {}; + ktextwidgets = callPackage ./ktextwidgets.nix {}; + kunitconversion = callPackage ./kunitconversion.nix {}; + kwallet = callPackage ./kwallet.nix {}; + kwayland = callPackage ./kwayland.nix {}; + kwidgetsaddons = callPackage ./kwidgetsaddons.nix {}; + kwindowsystem = callPackage ./kwindowsystem.nix {}; + kxmlgui = callPackage ./kxmlgui.nix {}; + kxmlrpcclient = callPackage ./kxmlrpcclient.nix {}; + modemmanager-qt = callPackage ./modemmanager-qt.nix {}; + networkmanager-qt = callPackage ./networkmanager-qt.nix {}; + oxygen-icons5 = callPackage ./oxygen-icons5.nix {}; + plasma-framework = callPackage ./plasma-framework.nix {}; + solid = callPackage ./solid.nix {}; + sonnet = callPackage ./sonnet.nix {}; + syntax-highlighting = callPackage ./syntax-highlighting.nix {}; + threadweaver = callPackage ./threadweaver.nix {}; }; - }; -in -{ - attica = callPackage ./attica.nix {}; - baloo = callPackage ./baloo.nix {}; - bluez-qt = callPackage ./bluez-qt.nix {}; - breeze-icons = callPackage ./breeze-icons.nix {}; - ecm = callPackage ./extra-cmake-modules {}; - ecmNoHooks = callPackage ./extra-cmake-modules/no-hooks.nix { }; - frameworkintegration = callPackage ./frameworkintegration.nix {}; - kactivities = callPackage ./kactivities.nix {}; - kactivities-stats = callPackage ./kactivities-stats.nix {}; - kapidox = callPackage ./kapidox.nix {}; - karchive = callPackage ./karchive.nix {}; - kauth = callPackage ./kauth {}; - kbookmarks = callPackage ./kbookmarks.nix {}; - kcmutils = callPackage ./kcmutils {}; - kcodecs = callPackage ./kcodecs.nix {}; - kcompletion = callPackage ./kcompletion.nix {}; - kconfig = callPackage ./kconfig.nix {}; - kconfigwidgets = callPackage ./kconfigwidgets {}; - kcoreaddons = callPackage ./kcoreaddons.nix {}; - kcrash = callPackage ./kcrash.nix {}; - kdbusaddons = callPackage ./kdbusaddons.nix {}; - kdeclarative = callPackage ./kdeclarative.nix {}; - kded = callPackage ./kded.nix {}; - kdelibs4support = callPackage ./kdelibs4support {}; - kdesignerplugin = callPackage ./kdesignerplugin.nix {}; - kdesu = callPackage ./kdesu.nix {}; - kdnssd = callPackage ./kdnssd.nix {}; - kdoctools = callPackage ./kdoctools {}; - kemoticons = callPackage ./kemoticons.nix {}; - kfilemetadata = callPackage ./kfilemetadata {}; - kglobalaccel = callPackage ./kglobalaccel.nix {}; - kguiaddons = callPackage ./kguiaddons.nix {}; - khtml = callPackage ./khtml.nix {}; - ki18n = callPackage ./ki18n.nix {}; - kiconthemes = callPackage ./kiconthemes {}; - kidletime = callPackage ./kidletime.nix {}; - kimageformats = callPackage ./kimageformats.nix {}; - kinit = callPackage ./kinit {}; - kio = callPackage ./kio {}; - kitemmodels = callPackage ./kitemmodels.nix {}; - kitemviews = callPackage ./kitemviews.nix {}; - kjobwidgets = callPackage ./kjobwidgets.nix {}; - kjs = callPackage ./kjs.nix {}; - kjsembed = callPackage ./kjsembed.nix {}; - kmediaplayer = callPackage ./kmediaplayer.nix {}; - knewstuff = callPackage ./knewstuff.nix {}; - knotifications = callPackage ./knotifications.nix {}; - knotifyconfig = callPackage ./knotifyconfig.nix {}; - kpackage = callPackage ./kpackage {}; - kparts = callPackage ./kparts.nix {}; - kpeople = callPackage ./kpeople.nix {}; - kplotting = callPackage ./kplotting.nix {}; - kpty = callPackage ./kpty.nix {}; - kross = callPackage ./kross.nix {}; - krunner = callPackage ./krunner.nix {}; - kservice = callPackage ./kservice {}; - ktexteditor = callPackage ./ktexteditor.nix {}; - ktextwidgets = callPackage ./ktextwidgets.nix {}; - kunitconversion = callPackage ./kunitconversion.nix {}; - kwallet = callPackage ./kwallet.nix {}; - kwayland = callPackage ./kwayland.nix {}; - kwidgetsaddons = callPackage ./kwidgetsaddons.nix {}; - kwindowsystem = callPackage ./kwindowsystem.nix {}; - kxmlgui = callPackage ./kxmlgui.nix {}; - kxmlrpcclient = callPackage ./kxmlrpcclient.nix {}; - modemmanager-qt = callPackage ./modemmanager-qt.nix {}; - networkmanager-qt = callPackage ./networkmanager-qt.nix {}; - oxygen-icons5 = callPackage ./oxygen-icons5.nix {}; - plasma-framework = callPackage ./plasma-framework.nix {}; - solid = callPackage ./solid.nix {}; - sonnet = callPackage ./sonnet.nix {}; - syntax-highlighting = callPackage ./syntax-highlighting.nix {}; - threadweaver = callPackage ./threadweaver.nix {}; -} + +in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix index 6c0919a2361..b2e3a371e96 100644 --- a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix +++ b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/default.nix @@ -1,6 +1,20 @@ -{ makeSetupHook, lib, cmake, ecmNoHooks, pkgconfig, qtbase, qttools }: +{ kdeFramework, lib, copyPathsToStore, cmake, pkgconfig }: -makeSetupHook { - deps = lib.chooseDevOutputs [ cmake ecmNoHooks pkgconfig qtbase qttools ]; +kdeFramework { + name = "extra-cmake-modules"; + + patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); + + outputs = [ "out" ]; # this package has no runtime components + + propagatedNativeBuildInputs = [ cmake pkgconfig ]; + + setupHook = ./setup-hook.sh; + + meta = with lib; { + platforms = lib.platforms.linux; + homepage = "http://www.kde.org"; + license = licenses.bsd2; + maintainers = [ maintainers.ttuegel ]; + }; } -./setup-hook.sh diff --git a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix deleted file mode 100644 index 855d6bdb3d2..00000000000 --- a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/no-hooks.nix +++ /dev/null @@ -1,18 +0,0 @@ -{ kdeFramework, lib, copyPathsToStore, cmake }: - -kdeFramework { - name = "extra-cmake-modules"; - - patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); - - outputs = [ "out" ]; # this package has no runtime components - - nativeBuildInputs = [ cmake ]; - - meta = with lib; { - platforms = lib.platforms.linux; - homepage = "http://www.kde.org"; - license = licenses.bsd2; - maintainers = [ maintainers.ttuegel ]; - }; -} diff --git a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh index a1638ca541b..9ee9ef90a44 100644 --- a/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh +++ b/pkgs/development/libraries/kde-frameworks/extra-cmake-modules/setup-hook.sh @@ -1,6 +1,6 @@ _ecmSetXdgDirs() { - addToSearchPathOnce XDG_DATA_DIRS "$1/share" - addToSearchPathOnce XDG_CONFIG_DIRS "$1/etc/xdg" + addToSearchPath XDG_DATA_DIRS "$1/share" + addToSearchPath XDG_CONFIG_DIRS "$1/etc/xdg" } envHooks+=(_ecmSetXdgDirs) diff --git a/pkgs/development/libraries/kde-frameworks/frameworkintegration.nix b/pkgs/development/libraries/kde-frameworks/frameworkintegration.nix index 029a661601d..325758bf91d 100644 --- a/pkgs/development/libraries/kde-frameworks/frameworkintegration.nix +++ b/pkgs/development/libraries/kde-frameworks/frameworkintegration.nix @@ -1,6 +1,6 @@ { kdeFramework, lib, - ecm, + extra-cmake-modules, kbookmarks, kcompletion, kconfig, kconfigwidgets, ki18n, kiconthemes, kio, knewstuff, knotifications, kpackage, kwidgetsaddons, libXcursor, qtx11extras }: @@ -8,7 +8,7 @@ kdeFramework { name = "frameworkintegration"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kbookmarks kcompletion kconfig kconfigwidgets ki18n kio kiconthemes knewstuff knotifications kpackage kwidgetsaddons libXcursor qtx11extras diff --git a/pkgs/development/libraries/kde-frameworks/kactivities-stats.nix b/pkgs/development/libraries/kde-frameworks/kactivities-stats.nix index 4f406376faa..25188b009b6 100644 --- a/pkgs/development/libraries/kde-frameworks/kactivities-stats.nix +++ b/pkgs/development/libraries/kde-frameworks/kactivities-stats.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, boost, kactivities, kconfig }: +{ kdeFramework, lib, extra-cmake-modules, boost, kactivities, kconfig }: kdeFramework { name = "kactivities-stats"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ boost kactivities kconfig ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kactivities.nix b/pkgs/development/libraries/kde-frameworks/kactivities.nix index a2cacd4b257..167c3f15bbd 100644 --- a/pkgs/development/libraries/kde-frameworks/kactivities.nix +++ b/pkgs/development/libraries/kde-frameworks/kactivities.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, boost, kcmutils, kconfig +{ kdeFramework, lib, extra-cmake-modules, boost, kcmutils, kconfig , kcoreaddons, kdbusaddons, kdeclarative, kglobalaccel, ki18n , kio, kservice, kwindowsystem, kxmlgui, qtdeclarative }: @@ -6,7 +6,7 @@ kdeFramework { name = "kactivities"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ boost kcmutils kconfig kcoreaddons kdbusaddons kdeclarative kglobalaccel ki18n kio kservice kwindowsystem kxmlgui qtdeclarative diff --git a/pkgs/development/libraries/kde-frameworks/kapidox.nix b/pkgs/development/libraries/kde-frameworks/kapidox.nix index f6c60b7731e..749cf9b2970 100644 --- a/pkgs/development/libraries/kde-frameworks/kapidox.nix +++ b/pkgs/development/libraries/kde-frameworks/kapidox.nix @@ -1,7 +1,7 @@ -{ kdeFramework, lib, ecm, python }: +{ kdeFramework, lib, extra-cmake-modules, python }: kdeFramework { name = "kapidox"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm python ]; + nativeBuildInputs = [ extra-cmake-modules python ]; } diff --git a/pkgs/development/libraries/kde-frameworks/karchive.nix b/pkgs/development/libraries/kde-frameworks/karchive.nix index 265df45800f..ca3321bef84 100644 --- a/pkgs/development/libraries/kde-frameworks/karchive.nix +++ b/pkgs/development/libraries/kde-frameworks/karchive.nix @@ -1,7 +1,8 @@ -{ kdeFramework, lib, ecm }: +{ kdeFramework, lib, extra-cmake-modules, qtbase }: kdeFramework { name = "karchive"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kauth/default.nix b/pkgs/development/libraries/kde-frameworks/kauth/default.nix index f2a1c7717d5..7561575ae84 100644 --- a/pkgs/development/libraries/kde-frameworks/kauth/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kauth/default.nix @@ -1,9 +1,9 @@ -{ kdeFramework, lib, copyPathsToStore, ecm, kcoreaddons, polkit-qt }: +{ kdeFramework, lib, copyPathsToStore, extra-cmake-modules, kcoreaddons, polkit-qt, qttools }: kdeFramework { name = "kauth"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ kcoreaddons polkit-qt ]; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); } diff --git a/pkgs/development/libraries/kde-frameworks/kbookmarks.nix b/pkgs/development/libraries/kde-frameworks/kbookmarks.nix index 50cec5a39c8..36ea7405842 100644 --- a/pkgs/development/libraries/kde-frameworks/kbookmarks.nix +++ b/pkgs/development/libraries/kde-frameworks/kbookmarks.nix @@ -1,12 +1,12 @@ { - kdeFramework, lib, ecm, + kdeFramework, lib, extra-cmake-modules, kcodecs, kconfig, kconfigwidgets, kcoreaddons, kiconthemes, kxmlgui }: kdeFramework { name = "kbookmarks"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcodecs kconfig kconfigwidgets kcoreaddons kiconthemes kxmlgui ]; diff --git a/pkgs/development/libraries/kde-frameworks/kcmutils/default.nix b/pkgs/development/libraries/kde-frameworks/kcmutils/default.nix index dd1af737d68..fdf55174548 100644 --- a/pkgs/development/libraries/kde-frameworks/kcmutils/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kcmutils/default.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kconfigwidgets +{ kdeFramework, lib, extra-cmake-modules, kconfigwidgets , kcoreaddons, kdeclarative, ki18n, kiconthemes, kitemviews , kpackage, kservice, kxmlgui }: @@ -6,7 +6,7 @@ kdeFramework { name = "kcmutils"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kconfigwidgets kcoreaddons kdeclarative ki18n kiconthemes kitemviews kpackage kservice kxmlgui diff --git a/pkgs/development/libraries/kde-frameworks/kcodecs.nix b/pkgs/development/libraries/kde-frameworks/kcodecs.nix index a3fcd3023f5..482c30b7b57 100644 --- a/pkgs/development/libraries/kde-frameworks/kcodecs.nix +++ b/pkgs/development/libraries/kde-frameworks/kcodecs.nix @@ -1,7 +1,8 @@ -{ kdeFramework, lib, ecm }: +{ kdeFramework, lib, extra-cmake-modules, qtbase, qttools }: kdeFramework { name = "kcodecs"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kcompletion.nix b/pkgs/development/libraries/kde-frameworks/kcompletion.nix index 893f374933e..f143524889a 100644 --- a/pkgs/development/libraries/kde-frameworks/kcompletion.nix +++ b/pkgs/development/libraries/kde-frameworks/kcompletion.nix @@ -1,8 +1,9 @@ -{ kdeFramework, lib, ecm, kconfig, kwidgetsaddons }: +{ kdeFramework, lib, extra-cmake-modules, kconfig, kwidgetsaddons, qtbase, qttools }: kdeFramework { name = "kcompletion"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ kconfig kwidgetsaddons ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kconfig.nix b/pkgs/development/libraries/kde-frameworks/kconfig.nix index 0f003f8ea97..981256e75bf 100644 --- a/pkgs/development/libraries/kde-frameworks/kconfig.nix +++ b/pkgs/development/libraries/kde-frameworks/kconfig.nix @@ -1,7 +1,8 @@ -{ kdeFramework, lib, ecm }: +{ kdeFramework, lib, extra-cmake-modules, qtbase, qttools }: kdeFramework { name = "kconfig"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kconfigwidgets/default.nix b/pkgs/development/libraries/kde-frameworks/kconfigwidgets/default.nix index b88308b634c..c44473bb915 100644 --- a/pkgs/development/libraries/kde-frameworks/kconfigwidgets/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kconfigwidgets/default.nix @@ -1,12 +1,12 @@ { - kdeFramework, lib, ecm, + kdeFramework, lib, extra-cmake-modules, kauth, kcodecs, kconfig, kdoctools, kguiaddons, ki18n, kwidgetsaddons }: kdeFramework { name = "kconfigwidgets"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kauth kconfig kcodecs kguiaddons ki18n kwidgetsaddons ]; diff --git a/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix b/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix index ca8c521894b..f5d04a30b1a 100644 --- a/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix +++ b/pkgs/development/libraries/kde-frameworks/kcoreaddons.nix @@ -1,8 +1,9 @@ -{ kdeFramework, lib, fetchurl, ecm, shared_mime_info }: +{ kdeFramework, lib, fetchurl, extra-cmake-modules, qtbase, qttools, shared_mime_info }: kdeFramework { name = "kcoreaddons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ shared_mime_info ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kcrash.nix b/pkgs/development/libraries/kde-frameworks/kcrash.nix index 2fcadc828cf..bd008c732af 100644 --- a/pkgs/development/libraries/kde-frameworks/kcrash.nix +++ b/pkgs/development/libraries/kde-frameworks/kcrash.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, kcoreaddons, kwindowsystem, qtx11extras }: +{ kdeFramework, lib, extra-cmake-modules, kcoreaddons, kwindowsystem, qtx11extras }: kdeFramework { name = "kcrash"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcoreaddons kwindowsystem qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kdbusaddons.nix b/pkgs/development/libraries/kde-frameworks/kdbusaddons.nix index 66320051660..bc5aeff556d 100644 --- a/pkgs/development/libraries/kde-frameworks/kdbusaddons.nix +++ b/pkgs/development/libraries/kde-frameworks/kdbusaddons.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, qtx11extras }: +{ kdeFramework, lib, extra-cmake-modules, qttools, qtx11extras }: kdeFramework { name = "kdbusaddons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kdeclarative.nix b/pkgs/development/libraries/kde-frameworks/kdeclarative.nix index a90a419d9b8..05eaffb9fbf 100644 --- a/pkgs/development/libraries/kde-frameworks/kdeclarative.nix +++ b/pkgs/development/libraries/kde-frameworks/kdeclarative.nix @@ -1,5 +1,5 @@ { - kdeFramework, lib, ecm, + kdeFramework, lib, extra-cmake-modules, epoxy, kconfig, kglobalaccel, kguiaddons, ki18n, kiconthemes, kio, kpackage, kwidgetsaddons, kwindowsystem, pkgconfig, qtdeclarative }: @@ -7,7 +7,7 @@ kdeFramework { name = "kdeclarative"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ epoxy kconfig kglobalaccel kguiaddons ki18n kiconthemes kio kpackage kwidgetsaddons kwindowsystem qtdeclarative diff --git a/pkgs/development/libraries/kde-frameworks/kded.nix b/pkgs/development/libraries/kde-frameworks/kded.nix index d8fe820518d..2da1bac8f39 100644 --- a/pkgs/development/libraries/kde-frameworks/kded.nix +++ b/pkgs/development/libraries/kde-frameworks/kded.nix @@ -1,12 +1,12 @@ { - kdeFramework, lib, ecm, + kdeFramework, lib, extra-cmake-modules, kconfig, kcoreaddons, kcrash, kdbusaddons, kdoctools, kinit, kservice }: kdeFramework { name = "kded"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kcoreaddons kcrash kdbusaddons kinit kservice ]; diff --git a/pkgs/development/libraries/kde-frameworks/kdelibs4support/default.nix b/pkgs/development/libraries/kde-frameworks/kdelibs4support/default.nix index f3fd315e550..1174972917e 100644 --- a/pkgs/development/libraries/kde-frameworks/kdelibs4support/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kdelibs4support/default.nix @@ -1,5 +1,5 @@ { kdeFramework, lib, copyPathsToStore -, ecm, docbook_xml_dtd_45, kauth +, extra-cmake-modules, docbook_xml_dtd_45, kauth , karchive, kcompletion, kconfig, kconfigwidgets, kcoreaddons , kcrash, kdbusaddons, kded, kdesignerplugin, kdoctools, kemoticons , kglobalaccel, kguiaddons, ki18n, kiconthemes, kio, kitemmodels @@ -15,7 +15,7 @@ kdeFramework { meta = { maintainers = [ lib.maintainers.ttuegel ]; }; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); setupHook = ./setup-hook.sh; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kauth karchive kcompletion kconfig kconfigwidgets kcoreaddons kcrash kdbusaddons kded kdesignerplugin kemoticons kglobalaccel kguiaddons ki18n diff --git a/pkgs/development/libraries/kde-frameworks/kdesignerplugin.nix b/pkgs/development/libraries/kde-frameworks/kdesignerplugin.nix index e87bb5bf9d0..8e17a1a60c8 100644 --- a/pkgs/development/libraries/kde-frameworks/kdesignerplugin.nix +++ b/pkgs/development/libraries/kde-frameworks/kdesignerplugin.nix @@ -1,5 +1,5 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , kcompletion , kconfig , kconfigwidgets @@ -18,7 +18,7 @@ kdeFramework { name = "kdesignerplugin"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcompletion kconfig kconfigwidgets kcoreaddons kiconthemes kio kitemviews kplotting ktextwidgets kwidgetsaddons kxmlgui sonnet diff --git a/pkgs/development/libraries/kde-frameworks/kdesu.nix b/pkgs/development/libraries/kde-frameworks/kdesu.nix index 0c5cb85cc49..fcccea9161f 100644 --- a/pkgs/development/libraries/kde-frameworks/kdesu.nix +++ b/pkgs/development/libraries/kde-frameworks/kdesu.nix @@ -1,10 +1,10 @@ -{ kdeFramework, lib, ecm, kcoreaddons, ki18n, kpty +{ kdeFramework, lib, extra-cmake-modules, kcoreaddons, ki18n, kpty , kservice }: kdeFramework { name = "kdesu"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcoreaddons ki18n kpty kservice ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kdnssd.nix b/pkgs/development/libraries/kde-frameworks/kdnssd.nix index 49fd368fccb..ad86b660c74 100644 --- a/pkgs/development/libraries/kde-frameworks/kdnssd.nix +++ b/pkgs/development/libraries/kde-frameworks/kdnssd.nix @@ -1,11 +1,12 @@ { kdeFramework, lib -, ecm -, avahi +, extra-cmake-modules, qttools +, avahi, qtbase }: kdeFramework { name = "kdnssd"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ avahi ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kdoctools/default.nix b/pkgs/development/libraries/kde-frameworks/kdoctools/default.nix index 4a31ea5396d..99fc4c7d023 100644 --- a/pkgs/development/libraries/kde-frameworks/kdoctools/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kdoctools/default.nix @@ -1,11 +1,11 @@ -{ kdeFramework, lib, ecm, docbook_xml_dtd_45 +{ kdeFramework, lib, extra-cmake-modules, docbook_xml_dtd_45 , docbook5_xsl, karchive, ki18n, perl, perlPackages }: kdeFramework { name = "kdoctools"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ karchive ki18n ]; propagatedNativeBuildInputs = [ perl perlPackages.URI ]; cmakeFlags = [ diff --git a/pkgs/development/libraries/kde-frameworks/kemoticons.nix b/pkgs/development/libraries/kde-frameworks/kemoticons.nix index cdffbd50357..1e31277172d 100644 --- a/pkgs/development/libraries/kde-frameworks/kemoticons.nix +++ b/pkgs/development/libraries/kde-frameworks/kemoticons.nix @@ -1,5 +1,5 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , karchive , kconfig , kcoreaddons @@ -9,6 +9,6 @@ kdeFramework { name = "kemoticons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ karchive kconfig kcoreaddons kservice ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kfilemetadata/default.nix b/pkgs/development/libraries/kde-frameworks/kfilemetadata/default.nix index 31f692deca6..bc7349e7453 100644 --- a/pkgs/development/libraries/kde-frameworks/kfilemetadata/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kfilemetadata/default.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, copyPathsToStore, ecm +{ kdeFramework, lib, copyPathsToStore, extra-cmake-modules , attr, ebook_tools, exiv2, ffmpeg, karchive, ki18n, poppler, qtbase, taglib }: @@ -6,7 +6,7 @@ kdeFramework { name = "kfilemetadata"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ attr ebook_tools exiv2 ffmpeg karchive ki18n poppler qtbase taglib ]; diff --git a/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix b/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix index bbb480c3165..1c1336dd4d0 100644 --- a/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix +++ b/pkgs/development/libraries/kde-frameworks/kglobalaccel.nix @@ -1,5 +1,5 @@ { - kdeFramework, lib, ecm, + kdeFramework, lib, extra-cmake-modules, kconfig, kcoreaddons, kcrash, kdbusaddons, kservice, kwindowsystem, qtx11extras }: @@ -7,7 +7,7 @@ kdeFramework { name = "kglobalaccel"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kconfig kcoreaddons kcrash kdbusaddons kservice kwindowsystem qtx11extras ]; diff --git a/pkgs/development/libraries/kde-frameworks/kguiaddons.nix b/pkgs/development/libraries/kde-frameworks/kguiaddons.nix index 9f20ecd598a..6ebfd1104f7 100644 --- a/pkgs/development/libraries/kde-frameworks/kguiaddons.nix +++ b/pkgs/development/libraries/kde-frameworks/kguiaddons.nix @@ -1,11 +1,11 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , qtx11extras }: kdeFramework { name = "kguiaddons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/khtml.nix b/pkgs/development/libraries/kde-frameworks/khtml.nix index be1094b7cf5..99f6fe31e0d 100644 --- a/pkgs/development/libraries/kde-frameworks/khtml.nix +++ b/pkgs/development/libraries/kde-frameworks/khtml.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, giflib, karchive +{ kdeFramework, lib, extra-cmake-modules, giflib, karchive , kcodecs, kglobalaccel, ki18n, kiconthemes, kio, kjs , knotifications, kparts, ktextwidgets, kwallet, kwidgetsaddons , kwindowsystem, kxmlgui, perl, phonon, qtx11extras, sonnet @@ -7,7 +7,7 @@ kdeFramework { name = "khtml"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm perl ]; + nativeBuildInputs = [ extra-cmake-modules perl ]; propagatedBuildInputs = [ giflib karchive kcodecs kglobalaccel ki18n kiconthemes kio kjs knotifications kparts ktextwidgets kwallet kwidgetsaddons kwindowsystem diff --git a/pkgs/development/libraries/kde-frameworks/ki18n.nix b/pkgs/development/libraries/kde-frameworks/ki18n.nix index cf2212413bd..2698a97fd33 100644 --- a/pkgs/development/libraries/kde-frameworks/ki18n.nix +++ b/pkgs/development/libraries/kde-frameworks/ki18n.nix @@ -1,5 +1,5 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , gettext , python , qtdeclarative @@ -9,7 +9,7 @@ kdeFramework { name = "ki18n"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ qtdeclarative qtscript ]; propagatedNativeBuildInputs = [ gettext python ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kiconthemes/default.nix b/pkgs/development/libraries/kde-frameworks/kiconthemes/default.nix index 6141db849ef..6102bb0d4b5 100644 --- a/pkgs/development/libraries/kde-frameworks/kiconthemes/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kiconthemes/default.nix @@ -1,5 +1,5 @@ { kdeFramework, lib, copyPathsToStore -, ecm +, extra-cmake-modules , karchive, kconfigwidgets, ki18n, breeze-icons, kitemviews, qtsvg }: @@ -7,6 +7,6 @@ kdeFramework { name = "kiconthemes"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ breeze-icons kconfigwidgets karchive ki18n kitemviews qtsvg ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kidletime.nix b/pkgs/development/libraries/kde-frameworks/kidletime.nix index d3f46512db2..758260517e7 100644 --- a/pkgs/development/libraries/kde-frameworks/kidletime.nix +++ b/pkgs/development/libraries/kde-frameworks/kidletime.nix @@ -1,5 +1,5 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , qtbase , qtx11extras }: @@ -7,6 +7,6 @@ kdeFramework { name = "kidletime"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ qtbase qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kimageformats.nix b/pkgs/development/libraries/kde-frameworks/kimageformats.nix index 631cac4217c..2a8e825893b 100644 --- a/pkgs/development/libraries/kde-frameworks/kimageformats.nix +++ b/pkgs/development/libraries/kde-frameworks/kimageformats.nix @@ -1,14 +1,14 @@ { kdeFramework, lib, - ecm, - ilmbase, karchive + extra-cmake-modules, + ilmbase, karchive, qtbase }: kdeFramework { name = "kimageformats"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; - buildInputs = [ ilmbase ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ ilmbase qtbase ]; propagatedBuildInputs = [ karchive ]; NIX_CFLAGS_COMPILE = "-I${ilmbase.dev}/include/OpenEXR"; } diff --git a/pkgs/development/libraries/kde-frameworks/kinit/default.nix b/pkgs/development/libraries/kde-frameworks/kinit/default.nix index 032bdd30d9e..b965f761e92 100644 --- a/pkgs/development/libraries/kde-frameworks/kinit/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kinit/default.nix @@ -1,13 +1,13 @@ { kdeFramework, lib, copyPathsToStore, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kconfig, kcrash, ki18n, kio, kservice, kwindowsystem }: kdeFramework { name = "kinit"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kcrash ki18n kio kservice kwindowsystem ]; diff --git a/pkgs/development/libraries/kde-frameworks/kio/default.nix b/pkgs/development/libraries/kde-frameworks/kio/default.nix index 7623e44a076..cb67c845903 100644 --- a/pkgs/development/libraries/kde-frameworks/kio/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kio/default.nix @@ -1,5 +1,5 @@ { kdeFramework, lib, copyPathsToStore -, ecm, acl, karchive +, extra-cmake-modules, acl, karchive , kbookmarks, kcompletion, kconfig, kconfigwidgets, kcoreaddons , kdbusaddons, kdoctools, ki18n, kiconthemes, kitemviews , kjobwidgets, knotifications, kservice, ktextwidgets, kwallet @@ -10,7 +10,7 @@ kdeFramework { name = "kio"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ acl karchive kbookmarks kcompletion kconfig kconfigwidgets kcoreaddons kdbusaddons ki18n kiconthemes kitemviews kjobwidgets knotifications kservice diff --git a/pkgs/development/libraries/kde-frameworks/kitemmodels.nix b/pkgs/development/libraries/kde-frameworks/kitemmodels.nix index 0a474dfdb7d..d6538e57698 100644 --- a/pkgs/development/libraries/kde-frameworks/kitemmodels.nix +++ b/pkgs/development/libraries/kde-frameworks/kitemmodels.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules, qtbase }: kdeFramework { name = "kitemmodels"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kitemviews.nix b/pkgs/development/libraries/kde-frameworks/kitemviews.nix index 0af3de5770a..f114c007038 100644 --- a/pkgs/development/libraries/kde-frameworks/kitemviews.nix +++ b/pkgs/development/libraries/kde-frameworks/kitemviews.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules, qtbase, qttools }: kdeFramework { name = "kitemviews"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kjobwidgets.nix b/pkgs/development/libraries/kde-frameworks/kjobwidgets.nix index 1337f4109c2..ddc66d2eb20 100644 --- a/pkgs/development/libraries/kde-frameworks/kjobwidgets.nix +++ b/pkgs/development/libraries/kde-frameworks/kjobwidgets.nix @@ -1,13 +1,13 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , kcoreaddons , kwidgetsaddons -, qtx11extras +, qttools, qtx11extras }: kdeFramework { name = "kjobwidgets"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ kcoreaddons kwidgetsaddons qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kjs.nix b/pkgs/development/libraries/kde-frameworks/kjs.nix index 12852e6a1e7..abdc15ce8df 100644 --- a/pkgs/development/libraries/kde-frameworks/kjs.nix +++ b/pkgs/development/libraries/kde-frameworks/kjs.nix @@ -1,10 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , kdoctools }: kdeFramework { name = "kjs"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kjsembed.nix b/pkgs/development/libraries/kde-frameworks/kjsembed.nix index 20c8b2eea16..95bc02422f1 100644 --- a/pkgs/development/libraries/kde-frameworks/kjsembed.nix +++ b/pkgs/development/libraries/kde-frameworks/kjsembed.nix @@ -1,10 +1,10 @@ -{ kdeFramework, lib, ecm, kdoctools, ki18n, kjs +{ kdeFramework, lib, extra-cmake-modules, kdoctools, ki18n, kjs , qtsvg }: kdeFramework { name = "kjsembed"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ ki18n kjs qtsvg ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kmediaplayer.nix b/pkgs/development/libraries/kde-frameworks/kmediaplayer.nix index 360d8e90daf..93a6b450f76 100644 --- a/pkgs/development/libraries/kde-frameworks/kmediaplayer.nix +++ b/pkgs/development/libraries/kde-frameworks/kmediaplayer.nix @@ -1,5 +1,5 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , kparts , kxmlgui }: @@ -7,6 +7,6 @@ kdeFramework { name = "kmediaplayer"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kparts kxmlgui ]; } diff --git a/pkgs/development/libraries/kde-frameworks/knewstuff.nix b/pkgs/development/libraries/kde-frameworks/knewstuff.nix index b6a84e2539d..002418c65ad 100644 --- a/pkgs/development/libraries/kde-frameworks/knewstuff.nix +++ b/pkgs/development/libraries/kde-frameworks/knewstuff.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, attica, karchive +{ kdeFramework, lib, extra-cmake-modules, attica, karchive , kcompletion, kconfig, kcoreaddons, ki18n, kiconthemes, kio , kitemviews, kservice, ktextwidgets, kwidgetsaddons, kxmlgui }: @@ -6,7 +6,7 @@ kdeFramework { name = "knewstuff"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ attica karchive kcompletion kconfig kcoreaddons ki18n kiconthemes kio kitemviews kservice ktextwidgets kwidgetsaddons kxmlgui diff --git a/pkgs/development/libraries/kde-frameworks/knotifications.nix b/pkgs/development/libraries/kde-frameworks/knotifications.nix index 061a5d8d142..c1c07957872 100644 --- a/pkgs/development/libraries/kde-frameworks/knotifications.nix +++ b/pkgs/development/libraries/kde-frameworks/knotifications.nix @@ -1,15 +1,15 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules , kcodecs, kconfig, kcoreaddons, kwindowsystem , libdbusmenu , phonon -, qtx11extras +, qttools, qtx11extras }: kdeFramework { name = "knotifications"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ kcodecs kconfig kcoreaddons kwindowsystem libdbusmenu phonon qtx11extras ]; diff --git a/pkgs/development/libraries/kde-frameworks/knotifyconfig.nix b/pkgs/development/libraries/kde-frameworks/knotifyconfig.nix index b64f109f08b..0e357aecb99 100644 --- a/pkgs/development/libraries/kde-frameworks/knotifyconfig.nix +++ b/pkgs/development/libraries/kde-frameworks/knotifyconfig.nix @@ -1,10 +1,10 @@ -{ kdeFramework, lib, ecm, kcompletion, kconfig +{ kdeFramework, lib, extra-cmake-modules, kcompletion, kconfig , ki18n, kio, phonon }: kdeFramework { name = "knotifyconfig"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcompletion kconfig ki18n kio phonon ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kpackage/default.nix b/pkgs/development/libraries/kde-frameworks/kpackage/default.nix index 86ca5935a75..2953aea9a55 100644 --- a/pkgs/development/libraries/kde-frameworks/kpackage/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kpackage/default.nix @@ -1,13 +1,13 @@ { kdeFramework, fetchurl, lib, copyPathsToStore, - ecm, kdoctools, + extra-cmake-modules, kdoctools, karchive, kconfig, kcoreaddons, ki18n }: kdeFramework { name = "kpackage"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ karchive kconfig kcoreaddons ki18n ]; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); } diff --git a/pkgs/development/libraries/kde-frameworks/kparts.nix b/pkgs/development/libraries/kde-frameworks/kparts.nix index a46fa210b27..ad6ea2dbc30 100644 --- a/pkgs/development/libraries/kde-frameworks/kparts.nix +++ b/pkgs/development/libraries/kde-frameworks/kparts.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kconfig, kcoreaddons +{ kdeFramework, lib, extra-cmake-modules, kconfig, kcoreaddons , ki18n, kiconthemes, kio, kjobwidgets, knotifications, kservice , ktextwidgets, kwidgetsaddons, kxmlgui }: @@ -6,7 +6,7 @@ kdeFramework { name = "kparts"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kconfig kcoreaddons ki18n kiconthemes kio kjobwidgets knotifications kservice ktextwidgets kwidgetsaddons kxmlgui diff --git a/pkgs/development/libraries/kde-frameworks/kpeople.nix b/pkgs/development/libraries/kde-frameworks/kpeople.nix index 4ca9bc7fdbf..6acb5e2eed5 100644 --- a/pkgs/development/libraries/kde-frameworks/kpeople.nix +++ b/pkgs/development/libraries/kde-frameworks/kpeople.nix @@ -1,11 +1,11 @@ -{ kdeFramework, lib, ecm, kcoreaddons, ki18n +{ kdeFramework, lib, extra-cmake-modules, kcoreaddons, ki18n , kitemviews, kservice, kwidgetsaddons, qtdeclarative }: kdeFramework { name = "kpeople"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcoreaddons ki18n kitemviews kservice kwidgetsaddons qtdeclarative ]; diff --git a/pkgs/development/libraries/kde-frameworks/kplotting.nix b/pkgs/development/libraries/kde-frameworks/kplotting.nix index 6eda06445dc..3fa8283d06c 100644 --- a/pkgs/development/libraries/kde-frameworks/kplotting.nix +++ b/pkgs/development/libraries/kde-frameworks/kplotting.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules, qtbase }: kdeFramework { name = "kplotting"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kpty.nix b/pkgs/development/libraries/kde-frameworks/kpty.nix index d42f96fb92c..8bdaacb85f8 100644 --- a/pkgs/development/libraries/kde-frameworks/kpty.nix +++ b/pkgs/development/libraries/kde-frameworks/kpty.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, kcoreaddons, ki18n }: +{ kdeFramework, lib, extra-cmake-modules, kcoreaddons, ki18n }: kdeFramework { name = "kpty"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcoreaddons ki18n ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kross.nix b/pkgs/development/libraries/kde-frameworks/kross.nix index ae098654eb1..0e66d95b5cc 100644 --- a/pkgs/development/libraries/kde-frameworks/kross.nix +++ b/pkgs/development/libraries/kde-frameworks/kross.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kcompletion, kcoreaddons +{ kdeFramework, lib, extra-cmake-modules, kcompletion, kcoreaddons , kdoctools, ki18n, kiconthemes, kio, kparts, kwidgetsaddons , kxmlgui, qtscript }: @@ -6,7 +6,7 @@ kdeFramework { name = "kross"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kcompletion kcoreaddons ki18n kiconthemes kio kparts kwidgetsaddons kxmlgui qtscript diff --git a/pkgs/development/libraries/kde-frameworks/krunner.nix b/pkgs/development/libraries/kde-frameworks/krunner.nix index 064a89e0806..ec9ab7abe9f 100644 --- a/pkgs/development/libraries/kde-frameworks/krunner.nix +++ b/pkgs/development/libraries/kde-frameworks/krunner.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kconfig, kcoreaddons +{ kdeFramework, lib, extra-cmake-modules, kconfig, kcoreaddons , ki18n, kio, kservice, plasma-framework, solid , threadweaver }: @@ -6,7 +6,7 @@ kdeFramework { name = "krunner"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kconfig kcoreaddons ki18n kio kservice plasma-framework solid threadweaver diff --git a/pkgs/development/libraries/kde-frameworks/kservice/default.nix b/pkgs/development/libraries/kde-frameworks/kservice/default.nix index ca840fc8b71..2751a7f5d6e 100644 --- a/pkgs/development/libraries/kde-frameworks/kservice/default.nix +++ b/pkgs/development/libraries/kde-frameworks/kservice/default.nix @@ -1,13 +1,13 @@ { kdeFramework, lib, copyPathsToStore, - bison, ecm, flex, + bison, extra-cmake-modules, flex, kconfig, kcoreaddons, kcrash, kdbusaddons, kdoctools, ki18n, kwindowsystem }: kdeFramework { name = "kservice"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - propagatedNativeBuildInputs = [ bison ecm flex ]; + propagatedNativeBuildInputs = [ bison extra-cmake-modules flex ]; nativeBuildInputs = [ kdoctools ]; propagatedBuildInputs = [ kconfig kcoreaddons kcrash kdbusaddons ki18n kwindowsystem ]; patches = copyPathsToStore (lib.readPathsFromFile ./. ./series); diff --git a/pkgs/development/libraries/kde-frameworks/ktexteditor.nix b/pkgs/development/libraries/kde-frameworks/ktexteditor.nix index 0e444cc8db6..fbd73c65eff 100644 --- a/pkgs/development/libraries/kde-frameworks/ktexteditor.nix +++ b/pkgs/development/libraries/kde-frameworks/ktexteditor.nix @@ -1,5 +1,5 @@ { kdeFramework, lib, copyPathsToStore -, ecm, perl +, extra-cmake-modules, perl , karchive, kconfig, kguiaddons, kiconthemes, kparts , libgit2 , qtscript, qtxmlpatterns @@ -9,7 +9,7 @@ kdeFramework { name = "ktexteditor"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm perl ]; + nativeBuildInputs = [ extra-cmake-modules perl ]; propagatedBuildInputs = [ karchive kconfig kguiaddons ki18n kiconthemes kio kparts libgit2 qtscript qtxmlpatterns sonnet syntax-highlighting diff --git a/pkgs/development/libraries/kde-frameworks/ktextwidgets.nix b/pkgs/development/libraries/kde-frameworks/ktextwidgets.nix index 3a1258e9a37..25954c60397 100644 --- a/pkgs/development/libraries/kde-frameworks/ktextwidgets.nix +++ b/pkgs/development/libraries/kde-frameworks/ktextwidgets.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kcompletion, kconfig +{ kdeFramework, lib, extra-cmake-modules, kcompletion, kconfig , kconfigwidgets, ki18n, kiconthemes, kservice, kwindowsystem , sonnet }: @@ -6,7 +6,7 @@ kdeFramework { name = "ktextwidgets"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ kcompletion kconfig kconfigwidgets ki18n kiconthemes kservice kwindowsystem sonnet diff --git a/pkgs/development/libraries/kde-frameworks/kunitconversion.nix b/pkgs/development/libraries/kde-frameworks/kunitconversion.nix index 136587cc682..c04ded722aa 100644 --- a/pkgs/development/libraries/kde-frameworks/kunitconversion.nix +++ b/pkgs/development/libraries/kde-frameworks/kunitconversion.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, ki18n }: +{ kdeFramework, lib, extra-cmake-modules, ki18n }: kdeFramework { name = "kunitconversion"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ ki18n ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kwallet.nix b/pkgs/development/libraries/kde-frameworks/kwallet.nix index fb801f48b11..f02c6138df7 100644 --- a/pkgs/development/libraries/kde-frameworks/kwallet.nix +++ b/pkgs/development/libraries/kde-frameworks/kwallet.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, kconfig, kconfigwidgets +{ kdeFramework, lib, extra-cmake-modules, kconfig, kconfigwidgets , kcoreaddons , kdbusaddons, kdoctools, ki18n, kiconthemes , knotifications , kservice, kwidgetsaddons, kwindowsystem, libgcrypt }: @@ -6,7 +6,7 @@ kdeFramework { name = "kwallet"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kconfigwidgets kcoreaddons kdbusaddons ki18n kiconthemes knotifications kservice kwidgetsaddons kwindowsystem libgcrypt diff --git a/pkgs/development/libraries/kde-frameworks/kwayland.nix b/pkgs/development/libraries/kde-frameworks/kwayland.nix index c530bf80a90..b5255022a86 100644 --- a/pkgs/development/libraries/kde-frameworks/kwayland.nix +++ b/pkgs/development/libraries/kde-frameworks/kwayland.nix @@ -1,13 +1,14 @@ { kdeFramework -, ecm -, wayland +, extra-cmake-modules +, qtbase, wayland }: kdeFramework { name = "kwayland"; nativeBuildInputs = [ - ecm + extra-cmake-modules ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ wayland ]; diff --git a/pkgs/development/libraries/kde-frameworks/kwidgetsaddons.nix b/pkgs/development/libraries/kde-frameworks/kwidgetsaddons.nix index ae34e60c4c1..c5c0063c463 100644 --- a/pkgs/development/libraries/kde-frameworks/kwidgetsaddons.nix +++ b/pkgs/development/libraries/kde-frameworks/kwidgetsaddons.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules, qtbase, qttools }: kdeFramework { name = "kwidgetsaddons"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kwindowsystem.nix b/pkgs/development/libraries/kde-frameworks/kwindowsystem.nix index 64186a30ead..e55c4021b9e 100644 --- a/pkgs/development/libraries/kde-frameworks/kwindowsystem.nix +++ b/pkgs/development/libraries/kde-frameworks/kwindowsystem.nix @@ -1,11 +1,11 @@ { kdeFramework, lib -, ecm -, qtx11extras +, extra-cmake-modules +, qttools, qtx11extras }: kdeFramework { name = "kwindowsystem"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; propagatedBuildInputs = [ qtx11extras ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kxmlgui.nix b/pkgs/development/libraries/kde-frameworks/kxmlgui.nix index c48fc9efdfa..ea800bf58ae 100644 --- a/pkgs/development/libraries/kde-frameworks/kxmlgui.nix +++ b/pkgs/development/libraries/kde-frameworks/kxmlgui.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, ecm, attica, kconfig +{ kdeFramework, lib, extra-cmake-modules, attica, kconfig , kconfigwidgets, kglobalaccel, ki18n, kiconthemes, kitemviews , ktextwidgets, kwindowsystem, sonnet }: @@ -6,7 +6,7 @@ kdeFramework { name = "kxmlgui"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ attica kconfig kconfigwidgets kglobalaccel ki18n kiconthemes kitemviews ktextwidgets kwindowsystem sonnet diff --git a/pkgs/development/libraries/kde-frameworks/kxmlrpcclient.nix b/pkgs/development/libraries/kde-frameworks/kxmlrpcclient.nix index 31301875351..f20f4a22394 100644 --- a/pkgs/development/libraries/kde-frameworks/kxmlrpcclient.nix +++ b/pkgs/development/libraries/kde-frameworks/kxmlrpcclient.nix @@ -1,8 +1,8 @@ -{ kdeFramework, lib, ecm, ki18n, kio }: +{ kdeFramework, lib, extra-cmake-modules, ki18n, kio }: kdeFramework { name = "kxmlrpcclient"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; propagatedBuildInputs = [ ki18n kio ]; } diff --git a/pkgs/development/libraries/kde-frameworks/modemmanager-qt.nix b/pkgs/development/libraries/kde-frameworks/modemmanager-qt.nix index bf3487dcb39..b4d05678dc2 100644 --- a/pkgs/development/libraries/kde-frameworks/modemmanager-qt.nix +++ b/pkgs/development/libraries/kde-frameworks/modemmanager-qt.nix @@ -1,11 +1,12 @@ { kdeFramework, lib -, ecm -, modemmanager +, extra-cmake-modules +, modemmanager, qtbase }: kdeFramework { name = "modemmanager-qt"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ modemmanager ]; } diff --git a/pkgs/development/libraries/kde-frameworks/networkmanager-qt.nix b/pkgs/development/libraries/kde-frameworks/networkmanager-qt.nix index bb596863538..9d765eac95c 100644 --- a/pkgs/development/libraries/kde-frameworks/networkmanager-qt.nix +++ b/pkgs/development/libraries/kde-frameworks/networkmanager-qt.nix @@ -1,11 +1,12 @@ { kdeFramework, lib -, ecm -, networkmanager +, extra-cmake-modules +, qtbase, networkmanager }: kdeFramework { name = "networkmanager-qt"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; propagatedBuildInputs = [ networkmanager ]; } diff --git a/pkgs/development/libraries/kde-frameworks/oxygen-icons5.nix b/pkgs/development/libraries/kde-frameworks/oxygen-icons5.nix index 42978b46992..1d45b51274c 100644 --- a/pkgs/development/libraries/kde-frameworks/oxygen-icons5.nix +++ b/pkgs/development/libraries/kde-frameworks/oxygen-icons5.nix @@ -1,6 +1,6 @@ { kdeFramework , lib -, ecm +, extra-cmake-modules, qtbase }: kdeFramework { @@ -10,5 +10,6 @@ kdeFramework { maintainers = [ lib.maintainers.ttuegel ]; }; outputs = [ "out" ]; - nativeBuildInputs = [ ecm ]; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/plasma-framework.nix b/pkgs/development/libraries/kde-frameworks/plasma-framework.nix index 963e9322727..2fd667af0dc 100644 --- a/pkgs/development/libraries/kde-frameworks/plasma-framework.nix +++ b/pkgs/development/libraries/kde-frameworks/plasma-framework.nix @@ -1,4 +1,4 @@ -{ kdeFramework, lib, fetchurl, ecm, kactivities, karchive +{ kdeFramework, lib, fetchurl, extra-cmake-modules, kactivities, karchive , kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kdeclarative , kdoctools, kglobalaccel, kguiaddons, ki18n, kiconthemes, kio , knotifications, kpackage, kservice, kwayland, kwindowsystem, kxmlgui @@ -8,7 +8,7 @@ kdeFramework { name = "plasma-framework"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kactivities karchive kconfig kconfigwidgets kcoreaddons kdbusaddons kdeclarative kglobalaccel kguiaddons ki18n kiconthemes kio knotifications diff --git a/pkgs/development/libraries/kde-frameworks/solid.nix b/pkgs/development/libraries/kde-frameworks/solid.nix index de10a734558..330b64035a1 100644 --- a/pkgs/development/libraries/kde-frameworks/solid.nix +++ b/pkgs/development/libraries/kde-frameworks/solid.nix @@ -1,12 +1,12 @@ { kdeFramework, lib, - bison, ecm, flex, - qtdeclarative + bison, extra-cmake-modules, flex, + qtdeclarative, qttools }: kdeFramework { name = "solid"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ bison ecm flex ]; + nativeBuildInputs = [ bison extra-cmake-modules flex qttools ]; propagatedBuildInputs = [ qtdeclarative ]; } diff --git a/pkgs/development/libraries/kde-frameworks/sonnet.nix b/pkgs/development/libraries/kde-frameworks/sonnet.nix index 8b1cf6a2cd1..190f2bae1b8 100644 --- a/pkgs/development/libraries/kde-frameworks/sonnet.nix +++ b/pkgs/development/libraries/kde-frameworks/sonnet.nix @@ -1,11 +1,11 @@ { kdeFramework, lib -, ecm -, hunspell +, extra-cmake-modules +, hunspell, qtbase, qttools }: kdeFramework { name = "sonnet"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm ]; - buildInputs = [ hunspell ]; + nativeBuildInputs = [ extra-cmake-modules qttools ]; + buildInputs = [ hunspell qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/syntax-highlighting.nix b/pkgs/development/libraries/kde-frameworks/syntax-highlighting.nix index 24b1bbc4f67..155e9fb8961 100644 --- a/pkgs/development/libraries/kde-frameworks/syntax-highlighting.nix +++ b/pkgs/development/libraries/kde-frameworks/syntax-highlighting.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm, perl +, extra-cmake-modules, perl, qtbase, qttools }: kdeFramework { name = "syntax-highlighting"; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; - nativeBuildInputs = [ ecm perl ]; + nativeBuildInputs = [ extra-cmake-modules perl qttools ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kde-frameworks/threadweaver.nix b/pkgs/development/libraries/kde-frameworks/threadweaver.nix index 6d3dff60413..bf36a21e9ec 100644 --- a/pkgs/development/libraries/kde-frameworks/threadweaver.nix +++ b/pkgs/development/libraries/kde-frameworks/threadweaver.nix @@ -1,9 +1,10 @@ { kdeFramework, lib -, ecm +, extra-cmake-modules, qtbase }: kdeFramework { name = "threadweaver"; - nativeBuildInputs = [ ecm ]; meta = { maintainers = [ lib.maintainers.ttuegel ]; }; + nativeBuildInputs = [ extra-cmake-modules ]; + buildInputs = [ qtbase ]; } diff --git a/pkgs/development/libraries/kirigami/default.nix b/pkgs/development/libraries/kirigami/default.nix index 0fd80d7fa53..66e67e6b853 100644 --- a/pkgs/development/libraries/kirigami/default.nix +++ b/pkgs/development/libraries/kirigami/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, ecm, pkgconfig, plasma-framework, qtbase, qtquickcontrols }: +{ stdenv, fetchurl, cmake, extra-cmake-modules, pkgconfig, plasma-framework, qtbase, qtquickcontrols }: stdenv.mkDerivation rec { pname = "kirigami"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { buildInputs = [ qtbase qtquickcontrols plasma-framework ]; - nativeBuildInputs = [ cmake pkgconfig ecm ]; + nativeBuildInputs = [ cmake pkgconfig extra-cmake-modules ]; meta = with stdenv.lib; { license = licenses.lgpl2; diff --git a/pkgs/development/libraries/kirigami/v2.nix b/pkgs/development/libraries/kirigami/v2.nix index 7dc6e799bcf..0b332d40329 100644 --- a/pkgs/development/libraries/kirigami/v2.nix +++ b/pkgs/development/libraries/kirigami/v2.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, ecm, pkgconfig, plasma-framework, qtbase, qtquickcontrols2 }: +{ stdenv, fetchurl, cmake, extra-cmake-modules, pkgconfig, plasma-framework, qtbase, qtquickcontrols2 }: stdenv.mkDerivation rec { pname = "kirigami"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { buildInputs = [ qtbase qtquickcontrols2 plasma-framework ]; - nativeBuildInputs = [ cmake pkgconfig ecm ]; + nativeBuildInputs = [ cmake pkgconfig extra-cmake-modules ]; meta = with stdenv.lib; { license = licenses.lgpl2; diff --git a/pkgs/development/libraries/libktorrent/default.nix b/pkgs/development/libraries/libktorrent/default.nix index e5406d3a2a5..8b9778b269d 100644 --- a/pkgs/development/libraries/libktorrent/default.nix +++ b/pkgs/development/libraries/libktorrent/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, cmake, ecm +{ stdenv, fetchurl, cmake, extra-cmake-modules , karchive, kcrash, ki18n, kio, solid , boost, gmp, qca-qt5, libgcrypt }: @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; - nativeBuildInputs = [ cmake ecm ]; + nativeBuildInputs = [ cmake extra-cmake-modules ]; buildInputs = [ karchive kcrash ki18n kio solid qca-qt5 libgcrypt ]; propagatedBuildInputs = [ gmp boost ]; diff --git a/pkgs/development/libraries/phonon/default.nix b/pkgs/development/libraries/phonon/default.nix index 31d8b7d7c8e..defeb8db490 100644 --- a/pkgs/development/libraries/phonon/default.nix +++ b/pkgs/development/libraries/phonon/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, cmake, mesa, pkgconfig, libpulseaudio -, qt4 ? null, ecm ? null, qtbase ? null, qttools ? null +, qt4 ? null, extra-cmake-modules ? null, qtbase ? null, qttools ? null , withQt5 ? false , debug ? false }: @@ -32,7 +32,9 @@ stdenv.mkDerivation rec { [ mesa libpulseaudio ] ++ (if withQt5 then [ qtbase qttools ] else [ qt4 ]); - nativeBuildInputs = [ cmake pkgconfig ] ++ optional withQt5 ecm; + nativeBuildInputs = + [ cmake pkgconfig ] + ++ optional withQt5 extra-cmake-modules; NIX_CFLAGS_COMPILE = "-fPIC"; diff --git a/pkgs/development/tools/profiling/heaptrack/default.nix b/pkgs/development/tools/profiling/heaptrack/default.nix index 5d151b9c9a3..69aa84951a4 100644 --- a/pkgs/development/tools/profiling/heaptrack/default.nix +++ b/pkgs/development/tools/profiling/heaptrack/default.nix @@ -1,5 +1,5 @@ { - stdenv, fetchFromGitHub, cmake, ecm, + stdenv, fetchFromGitHub, cmake, extra-cmake-modules, zlib, boost162, libunwind, elfutils, sparsehash, qtbase, kio, kitemmodels, threadweaver, kconfigwidgets, kcoreaddons, }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { sha256 = "0dqchd2r4khv9gzj4n0qjii2nqygkj5jclkji8jbvivx5qwsqznc"; }; - nativeBuildInputs = [ cmake ecm ]; + nativeBuildInputs = [ cmake extra-cmake-modules ]; buildInputs = [ zlib boost162 libunwind elfutils sparsehash qtbase kio kitemmodels threadweaver kconfigwidgets kcoreaddons diff --git a/pkgs/development/tools/tora/default.nix b/pkgs/development/tools/tora/default.nix index 9f8f2df358a..350cda4e263 100644 --- a/pkgs/development/tools/tora/default.nix +++ b/pkgs/development/tools/tora/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, cmake, ecm, makeQtWrapper +{ stdenv, lib, fetchFromGitHub, cmake, extra-cmake-modules, makeQtWrapper , boost, doxygen, openssl, mysql, postgresql, graphviz, loki, qscintilla, qtbase }: let @@ -18,7 +18,7 @@ in stdenv.mkDerivation rec { enableParallelBuilding = true; buildInputs = [ - cmake ecm makeQtWrapper + cmake extra-cmake-modules makeQtWrapper boost doxygen graphviz loki mysql openssl postgresql qscintillaLib qtbase ]; diff --git a/pkgs/tools/misc/colord-kde/default.nix b/pkgs/tools/misc/colord-kde/default.nix index 7dc48db104c..0c8e9d6bcee 100644 --- a/pkgs/tools/misc/colord-kde/default.nix +++ b/pkgs/tools/misc/colord-kde/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl -, ecm, ki18n +, extra-cmake-modules, ki18n , kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kiconthemes, kcmutils , kio, knotifications, plasma-framework, kwidgetsaddons, kwindowsystem , kitemviews, lcms2, libXrandr, qtx11extras @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { sha256 = "0brdnpflm95vf4l41clrqxwvjrdwhs859n7401wxcykkmw4m0m3c"; }; - nativeBuildInputs = [ ecm ki18n ]; + nativeBuildInputs = [ extra-cmake-modules ki18n ]; buildInputs = [ kconfig kconfigwidgets kcoreaddons kdbusaddons kiconthemes diff --git a/pkgs/tools/misc/kdecoration-viewer/default.nix b/pkgs/tools/misc/kdecoration-viewer/default.nix index c32a814f232..33ccf28cb0d 100644 --- a/pkgs/tools/misc/kdecoration-viewer/default.nix +++ b/pkgs/tools/misc/kdecoration-viewer/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub -, cmake, ecm, qtquickcontrols, kconfigwidgets, kdeclarative, kdecoration }: +, cmake, extra-cmake-modules, qtquickcontrols, kconfigwidgets, kdeclarative, kdecoration }: stdenv.mkDerivation rec { name = "kdecoration-viewer-2015-08-20"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "1cc4xxv72a82p1w9r76090xba7g069r41bi4zx32k4gz3vyl1am6"; }; - buildInputs = [ cmake ecm qtquickcontrols kconfigwidgets kdeclarative kdecoration ]; + buildInputs = [ cmake extra-cmake-modules qtquickcontrols kconfigwidgets kdeclarative kdecoration ]; meta = with stdenv.lib; { description = "Allows to preview a KDecoration plugin"; diff --git a/pkgs/tools/misc/kronometer/default.nix b/pkgs/tools/misc/kronometer/default.nix index 598d0126623..5ba2543e273 100644 --- a/pkgs/tools/misc/kronometer/default.nix +++ b/pkgs/tools/misc/kronometer/default.nix @@ -1,6 +1,6 @@ { kdeDerivation, kdeWrapper, fetchurl, lib, - ecm, kdoctools, + extra-cmake-modules, kdoctools, kconfig, kinit }: @@ -19,7 +19,7 @@ let license = licenses.gpl2; maintainers = with maintainers; [ peterhoeg ]; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kinit ]; }; in diff --git a/pkgs/tools/misc/peruse/default.nix b/pkgs/tools/misc/peruse/default.nix index 61e9fae906b..1c7a28e2975 100644 --- a/pkgs/tools/misc/peruse/default.nix +++ b/pkgs/tools/misc/peruse/default.nix @@ -1,6 +1,6 @@ { kdeDerivation, kdeWrapper, fetchFromGitHub, fetchurl, lib, - ecm, kdoctools, + extra-cmake-modules, kdoctools, baloo, kconfig, kfilemetadata, kinit, kirigami, knewstuff, plasma-framework }: @@ -21,7 +21,7 @@ let sha256 = "1ik2627xynkichsq9x28rkczqn3l3p06q6vw5jdafdh3hisccmjq"; }; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ baloo kconfig kfilemetadata kinit kirigami knewstuff plasma-framework ]; diff --git a/pkgs/tools/text/kdiff3/default.nix b/pkgs/tools/text/kdiff3/default.nix index f1ae958ed63..b53d619d837 100644 --- a/pkgs/tools/text/kdiff3/default.nix +++ b/pkgs/tools/text/kdiff3/default.nix @@ -1,6 +1,6 @@ { kdeDerivation, kdeWrapper, lib, fetchgit, - ecm, kdoctools, kconfig, kinit, kparts + extra-cmake-modules, kdoctools, kconfig, kinit, kparts }: let @@ -18,7 +18,7 @@ let preConfigure = "cd kdiff3"; - nativeBuildInputs = [ ecm kdoctools ]; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ kconfig kinit kparts ]; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 297aae6147e..0571966d15b 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -6292,7 +6292,7 @@ with pkgs; cmakeWithGui = cmakeCurses.override { useQt4 = true; }; # Does not actually depend on Qt 5 - extra-cmake-modules = libsForQt5.ecmNoHooks; + inherit (kdeFrameworks) extra-cmake-modules; coccinelle = callPackage ../development/tools/misc/coccinelle { ocamlPackages = ocamlPackages_4_01_0; @@ -7852,6 +7852,16 @@ with pkgs; judy = callPackage ../development/libraries/judy { }; + kdeFrameworks = + let + mkFrameworks = import ../development/libraries/kde-frameworks; + attrs = { + inherit libsForQt5; + inherit kdeDerivation lib fetchurl; + }; + in + recurseIntoAttrs (makeOverridable mkFrameworks attrs); + kdelibs4 = kdeApplications.kdelibs; keybinder = callPackage ../development/libraries/keybinder { @@ -9341,12 +9351,14 @@ with pkgs; qt5ct = libsForQt5.callPackage ../tools/misc/qt5ct { }; - mkLibsForQt5 = self: with self; - let kdeFrameworks = import ../development/libraries/kde-frameworks { - inherit (self) newScope; - inherit kdeDerivation lib fetchurl; - }; - in { + mkLibsForQt5 = self: with self; { + + ### KDE FRAMEWORKS + + inherit (kdeFrameworks.override { libsForQt5 = self; }) + attica; + + ### LIBRARIES ### BUILD SUPPORT @@ -9426,7 +9438,7 @@ with pkgs; qtwebkit-plugins = callPackage ../development/libraries/qtwebkit-plugins { }; - } // kdeFrameworks; + }; qtEnv = qt5.env; qt5Full = qt5.full; @@ -12140,6 +12152,8 @@ with pkgs; bgnet = callPackage ../data/documentation/bgnet { }; + inherit (kdeFrameworks) breeze-icons; + cacert = callPackage ../data/misc/cacert { }; caladea = callPackage ../data/fonts/caladea {}; @@ -12376,6 +12390,8 @@ with pkgs; oxygenfonts = callPackage ../data/fonts/oxygenfonts { }; + inherit (kdeFrameworks) oxygen-icons5; + paper-icon-theme = callPackage ../data/icons/paper-icon-theme { }; pecita = callPackage ../data/fonts/pecita {}; From e8ad7f057031118a89e305473ca60c59e3464a50 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 14:59:00 -0600 Subject: [PATCH 186/216] qt5: Add compatibility attribute for qtquick1 --- pkgs/development/libraries/qt-5/5.6/default.nix | 1 + pkgs/development/libraries/qt-5/5.7/default.nix | 1 + 2 files changed, 2 insertions(+) diff --git a/pkgs/development/libraries/qt-5/5.6/default.nix b/pkgs/development/libraries/qt-5/5.6/default.nix index fd6b622344a..37b6eb7f3d3 100644 --- a/pkgs/development/libraries/qt-5/5.6/default.nix +++ b/pkgs/development/libraries/qt-5/5.6/default.nix @@ -93,6 +93,7 @@ let qtmultimedia = callPackage ./qtmultimedia.nix { inherit gstreamer gst-plugins-base; }; + qtquick1 = null; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; qtquickcontrols2 = callPackage ./qtquickcontrols2.nix {}; qtscript = callPackage ./qtscript {}; diff --git a/pkgs/development/libraries/qt-5/5.7/default.nix b/pkgs/development/libraries/qt-5/5.7/default.nix index 0fbcdfd9ebd..85b38c6fc6c 100644 --- a/pkgs/development/libraries/qt-5/5.7/default.nix +++ b/pkgs/development/libraries/qt-5/5.7/default.nix @@ -79,6 +79,7 @@ let qtmultimedia = callPackage ./qtmultimedia.nix { inherit gstreamer gst-plugins-base; }; + qtquick1 = null; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; qtquickcontrols2 = callPackage ./qtquickcontrols2.nix {}; qtscript = callPackage ./qtscript {}; From ef36b2ecbf1d8398a8e2bb6548a2c192513894f1 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 14:59:55 -0600 Subject: [PATCH 187/216] calligra: Rename oxygen-icons5 dependency --- pkgs/applications/office/calligra/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/applications/office/calligra/default.nix b/pkgs/applications/office/calligra/default.nix index ad9cb9e5ff0..154ff33c844 100644 --- a/pkgs/applications/office/calligra/default.nix +++ b/pkgs/applications/office/calligra/default.nix @@ -2,7 +2,7 @@ , exiv2, boost, sqlite, icu, vc, shared_mime_info, librevenge, libodfgen, libwpg , libwpd, poppler_qt4, ilmbase, gsl, qca2, marble, libvisio, libmysql, postgresql , freetds, fftw, glew, libkdcraw, pstoedit, opencolorio, kdepimlibs -, kactivities, okular, git, oxygen_icons, makeWrapper +, kactivities, okular, git, oxygen-icons5, makeWrapper # TODO: not found #, xbase, openjpeg # TODO: package libWPS, Spnav, m2mml, LibEtonyek @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { for i in $out/bin/*; do wrapProgram $i \ --prefix PATH ':' "${pstoedit.out}/bin" \ - --prefix XDG_DATA_DIRS ':' "${oxygen_icons}/share" + --prefix XDG_DATA_DIRS ':' "${oxygen-icons5}/share" done ''; From 1d710276323497e8267137be94825251fcc96248 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 15:00:36 -0600 Subject: [PATCH 188/216] qt55: Add compatibility attribute for qtquickcontrols2 --- pkgs/development/libraries/qt-5/5.5/default.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/pkgs/development/libraries/qt-5/5.5/default.nix b/pkgs/development/libraries/qt-5/5.5/default.nix index 607696dc562..b7e8fb33387 100644 --- a/pkgs/development/libraries/qt-5/5.5/default.nix +++ b/pkgs/development/libraries/qt-5/5.5/default.nix @@ -88,6 +88,7 @@ let }; qtquick1 = callPackage ./qtquick1 {}; qtquickcontrols = callPackage ./qtquickcontrols.nix {}; + qtquickcontrols2 = null; qtscript = callPackage ./qtscript {}; qtsensors = callPackage ./qtsensors.nix {}; qtserialport = callPackage ./qtserialport {}; From b58b07f903853c0de2db001c25f3a83a27d603ab Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 15:02:32 -0600 Subject: [PATCH 189/216] mkLibsForQt5: Inherit libraries from Plasma 5 and KDE Applications --- pkgs/desktops/lxqt/default.nix | 8 ++-- pkgs/top-level/all-packages.nix | 79 +++++++++++++++++++++------------ 2 files changed, 54 insertions(+), 33 deletions(-) diff --git a/pkgs/desktops/lxqt/default.nix b/pkgs/desktops/lxqt/default.nix index 00e36e342fa..71eff8a1b0f 100644 --- a/pkgs/desktops/lxqt/default.nix +++ b/pkgs/desktops/lxqt/default.nix @@ -35,9 +35,7 @@ let lxqt-about = callPackage ./core/lxqt-about { }; lxqt-admin = callPackage ./core/lxqt-admin { }; lxqt-common = callPackage ./core/lxqt-common { }; - lxqt-config = callPackage ./core/lxqt-config { - inherit (pkgs.plasma5) libkscreen; - }; + lxqt-config = callPackage ./core/lxqt-config { }; lxqt-globalkeys = callPackage ./core/lxqt-globalkeys { }; lxqt-l10n = callPackage ./core/lxqt-l10n { }; lxqt-notificationd = callPackage ./core/lxqt-notificationd { }; @@ -67,7 +65,7 @@ let preRequisitePackages = [ pkgs.gvfs # virtual file systems support for PCManFM-QT pkgs.libsForQt5.kwindowsystem # provides some QT5 plugins needed by lxqt-panel - pkgs.plasma5.libkscreen # provides plugins for screen management software + pkgs.libsForQt5.libkscreen # provides plugins for screen management software pkgs.libfm pkgs.libfm-extra pkgs.lxmenu-data @@ -120,7 +118,7 @@ let qlipper ### Default icon theme - qt5.oxygen-icons5 + pkgs.oxygen-icons5 ### Screen saver pkgs.xscreensaver diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 0571966d15b..9cc37f01069 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -6292,7 +6292,7 @@ with pkgs; cmakeWithGui = cmakeCurses.override { useQt4 = true; }; # Does not actually depend on Qt 5 - inherit (kdeFrameworks) extra-cmake-modules; + inherit (kdeFrameworks) extra-cmake-modules kapidox kdoctools; coccinelle = callPackage ../development/tools/misc/coccinelle { ocamlPackages = ocamlPackages_4_01_0; @@ -9356,11 +9356,27 @@ with pkgs; ### KDE FRAMEWORKS inherit (kdeFrameworks.override { libsForQt5 = self; }) - attica; + attica baloo bluez-qt frameworkintegration kactivities kactivities-stats + karchive kauth kbookmarks kcmutils kcodecs kcompletion kconfig + kconfigwidgets kcoreaddons kcrash kdbusaddons kdeclarative kdelibs4support + kdesignerplugin kdnssd kemoticons kfilemetadata kglobalaccel kguiaddons + khtml ki18n kiconthemes kidletime kimageformats kio kitemmodels kitemviews + kjobwidgets kjs kjsembed kmediaplayer knewstuff knotifications + knotifyconfig kpackage kparts kpeople kplotting kpty kross krunner + kservice ktexteditor ktextwidgets kunitconversion kwallet kwayland + kwidgetsaddons kwindowsystem kxmlgui kxmlrpcclient modemmanager-qt + networkmanager-qt plasma-framework solid sonnet syntax-highlighting + threadweaver; - ### LIBRARIES + ### KDE PLASMA 5 - ### BUILD SUPPORT + inherit (plasma5.override { libsForQt5 = self; }) + kdecoration libkscreen libksysguard plasma-integration; + + ### KDE APPLICATIONS + + inherit (kdeApplications.override { libsForQt5 = self; }) + libkdcraw libkexiv2 libkipi libkomparediff2; ### LIBRARIES @@ -12814,7 +12830,6 @@ with pkgs; calligra = kde4.callPackage ../applications/office/calligra { vc = vc_0_7; - oxygen_icons = libsForQt5.oxygen-icons5; }; camlistore = callPackage ../applications/misc/camlistore { }; @@ -14071,29 +14086,34 @@ with pkgs; kde-telepathy = kde4.callPackage ../applications/networking/instant-messengers/telepathy/kde {}; - kdeApplications = recurseIntoAttrs (import ../applications/kde { - inherit stdenv lib libsForQt5 fetchurl recurseIntoAttrs; - inherit kdeDerivation plasma5; - inherit attica phonon; - }); + kdeApplications = + let + mkApplications = import ../applications/kde; + attrs = { + inherit stdenv lib libsForQt5 fetchurl recurseIntoAttrs; + inherit kdeDerivation plasma5; + inherit attica phonon; + }; + in + recurseIntoAttrs (makeOverridable mkApplications attrs); + + inherit (kdeApplications) + ark dolphin filelight gwenview kate kdenlive kcalc kcolorchooser kgpg + khelpcenter kig konsole marble okteta okular spectacle; kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; - kdecoration-viewer = libsForQt5.callPackage ../tools/misc/kdecoration-viewer { - inherit (plasma5) kdecoration; - }; + kdecoration-viewer = libsForQt5.callPackage ../tools/misc/kdecoration-viewer { }; + + inherit (kdeFrameworks) kdesu; kdevelop-pg-qt = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevelop-pg-qt.nix {}; kdevelop = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevelop.nix { - inherit (kdeApplications) konsole; - inherit (plasma5) libksysguard; llvmPackages = llvmPackages_38; }; - kdevplatform = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevplatform.nix { - inherit (kdeApplications) libkomparediff2; - }; + kdevplatform = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevplatform.nix { }; keepnote = callPackage ../applications/office/keepnote { }; @@ -14115,18 +14135,14 @@ with pkgs; qt = qt4; }; - kile = libsForQt5.callPackage ../applications/editors/kile { - inherit (kdeApplications) konsole; - }; + kile = libsForQt5.callPackage ../applications/editors/kile { }; kino = callPackage ../applications/video/kino { inherit (gnome2) libglade; ffmpeg = ffmpeg_2; }; - kipi-plugins = libsForQt5.callPackage ../applications/graphics/kipi-plugins { - inherit (kdeApplications) libkipi; - }; + kipi-plugins = libsForQt5.callPackage ../applications/graphics/kipi-plugins { }; kiwix = callPackage ../applications/misc/kiwix { stdenv = overrideCC stdenv gcc49; @@ -16838,10 +16854,17 @@ with pkgs; pantheon-terminal = callPackage ../desktops/pantheon/apps/pantheon-terminal { }; }; - plasma5 = recurseIntoAttrs (import ../desktops/plasma-5 { - inherit libsForQt5 kdeDerivation lib fetchurl; - inherit (gnome3) gconf; - }); + inherit (kdeFrameworks) kded kinit; + + plasma5 = + let + mkPlasma5 = import ../desktops/plasma-5; + attrs = { + inherit libsForQt5 kdeDerivation lib fetchurl; + inherit (gnome3) gconf; + }; + in + recurseIntoAttrs (makeOverridable mkPlasma5 attrs); redshift = callPackage ../applications/misc/redshift { inherit (python3Packages) python pygobject3 pyxdg; From 6a115a247c7f0a1283a1787cbd4554face376d94 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 18:44:35 -0600 Subject: [PATCH 190/216] Export KDE packages at top level --- pkgs/applications/kde/default.nix | 4 +-- pkgs/top-level/all-packages.nix | 45 +++++++++++++++++++------------ 2 files changed, 29 insertions(+), 20 deletions(-) diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix index e638378ddbb..fff0df35d05 100644 --- a/pkgs/applications/kde/default.nix +++ b/pkgs/applications/kde/default.nix @@ -85,9 +85,7 @@ let okteta = callPackage ./okteta.nix {}; okular = callPackage ./okular.nix {}; print-manager = callPackage ./print-manager.nix {}; - spectacle = callPackage ./spectacle.nix { - inherit (plasma5) kscreen; - }; + spectacle = callPackage ./spectacle.nix {}; l10n = recurseIntoAttrs (import ./l10n.nix { inherit callPackage lib recurseIntoAttrs; }); }; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 9cc37f01069..b46121b8c3e 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9356,7 +9356,7 @@ with pkgs; ### KDE FRAMEWORKS inherit (kdeFrameworks.override { libsForQt5 = self; }) - attica baloo bluez-qt frameworkintegration kactivities kactivities-stats + attica baloo bluez-qt kactivities kactivities-stats karchive kauth kbookmarks kcmutils kcodecs kcompletion kconfig kconfigwidgets kcoreaddons kcrash kdbusaddons kdeclarative kdelibs4support kdesignerplugin kdnssd kemoticons kfilemetadata kglobalaccel kguiaddons @@ -9371,7 +9371,7 @@ with pkgs; ### KDE PLASMA 5 inherit (plasma5.override { libsForQt5 = self; }) - kdecoration libkscreen libksysguard plasma-integration; + kdecoration khotkeys libkscreen libksysguard; ### KDE APPLICATIONS @@ -14098,8 +14098,9 @@ with pkgs; recurseIntoAttrs (makeOverridable mkApplications attrs); inherit (kdeApplications) - ark dolphin filelight gwenview kate kdenlive kcalc kcolorchooser kgpg - khelpcenter kig konsole marble okteta okular spectacle; + akonadi ark dolphin ffmpegthumbs filelight gwenview kate + kdenlive kcalc kcolorchooser kcontacts kgpg khelpcenter kig konsole marble + okteta okular spectacle; kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; @@ -16268,7 +16269,6 @@ with pkgs; dhewm3 = callPackage ../games/dhewm3 {}; digikam = libsForQt5.callPackage ../applications/graphics/digikam { - inherit (kdeApplications) libkipi marble; inherit (plasma5) oxygen; boost = boost160; }; @@ -16854,18 +16854,6 @@ with pkgs; pantheon-terminal = callPackage ../desktops/pantheon/apps/pantheon-terminal { }; }; - inherit (kdeFrameworks) kded kinit; - - plasma5 = - let - mkPlasma5 = import ../desktops/plasma-5; - attrs = { - inherit libsForQt5 kdeDerivation lib fetchurl; - inherit (gnome3) gconf; - }; - in - recurseIntoAttrs (makeOverridable mkPlasma5 attrs); - redshift = callPackage ../applications/misc/redshift { inherit (python3Packages) python pygobject3 pyxdg; }; @@ -16895,6 +16883,29 @@ with pkgs; xrandr-invert-colors = callPackage ../applications/misc/xrandr-invert-colors { }; + ### DESKTOP ENVIRONMENTS / PLASMA 5 + + plasma5 = + let + mkPlasma5 = import ../desktops/plasma-5; + attrs = { + inherit libsForQt5 kdeDerivation lib fetchurl; + inherit (gnome3) gconf; + }; + in + recurseIntoAttrs (makeOverridable mkPlasma5 attrs); + + inherit (kdeFrameworks) kded kinit frameworkintegration; + + inherit (plasma5) + bluedevil breeze-gtk breeze-qt4 breeze-qt5 breeze-grub breeze-plymouth + kactivitymanagerd kde-cli-tools kde-gtk-config kdeplasma-addons kgamma5 + kinfocenter kmenuedit kscreen kscreenlocker ksshaskpass ksysguard + kwallet-pam kwayland-integration kwin kwrited milou oxygen plasma-desktop + plasma-integration plasma-nm plasma-pa plasma-workspace + plasma-workspace-wallpapers polkit-kde-agent powerdevil startkde + systemsettings; + ### SCIENCE ### SCIENCE/GEOMETRY From 6542ea7f3102dcde476b102cb5cb7fb99f75e852 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Sun, 26 Feb 2017 18:50:09 -0600 Subject: [PATCH 191/216] qt5: 5.6.2 -> 5.7.1 --- pkgs/top-level/all-packages.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index b46121b8c3e..b477a9df832 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -9346,8 +9346,8 @@ with pkgs; libsForQt57 = recurseIntoAttrs (lib.makeScope qt57.newScope mkLibsForQt5); - qt5 = qt56; - libsForQt5 = libsForQt56; + qt5 = qt57; + libsForQt5 = libsForQt57; qt5ct = libsForQt5.callPackage ../tools/misc/qt5ct { }; From 1d14e19fd436081f4568d3701ed53f0b4ab19261 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Mon, 27 Feb 2017 08:22:33 -0600 Subject: [PATCH 192/216] plasma5: 5.8.5 -> 5.8.6 --- pkgs/desktops/plasma-5/fetch.sh | 2 +- pkgs/desktops/plasma-5/khotkeys.nix | 8 - pkgs/desktops/plasma-5/srcs.nix | 320 ++++++++++++++-------------- 3 files changed, 161 insertions(+), 169 deletions(-) diff --git a/pkgs/desktops/plasma-5/fetch.sh b/pkgs/desktops/plasma-5/fetch.sh index 76f05bad0a7..7d127211956 100644 --- a/pkgs/desktops/plasma-5/fetch.sh +++ b/pkgs/desktops/plasma-5/fetch.sh @@ -1 +1 @@ -WGET_ARGS=( http://download.kde.org/stable/plasma/5.8.5/ -A '*.tar.xz' ) +WGET_ARGS=( http://download.kde.org/stable/plasma/5.8.6/ -A '*.tar.xz' ) diff --git a/pkgs/desktops/plasma-5/khotkeys.nix b/pkgs/desktops/plasma-5/khotkeys.nix index 5360f6cf0b7..2b02e5916b9 100644 --- a/pkgs/desktops/plasma-5/khotkeys.nix +++ b/pkgs/desktops/plasma-5/khotkeys.nix @@ -7,14 +7,6 @@ plasmaPackage { name = "khotkeys"; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; - - patches = [ - # Patch is in 5.9 and up. - (fetchpatch { - url = "https://cgit.kde.org/khotkeys.git/patch/?id=f8f7eaaf41e2b95ebfa4b2e35c6ee252524a471b"; - sha256 = "1wxx3qv16jd623jh728xcda8i4y1daq25skwilhv4cfvqxyzk7nn"; - }) - ]; propagatedBuildInputs = [ kdelibs4support kglobalaccel ki18n kio plasma-framework plasma-workspace qtx11extras kcmutils kdbusaddons kxmlgui diff --git a/pkgs/desktops/plasma-5/srcs.nix b/pkgs/desktops/plasma-5/srcs.nix index 03ee867453b..aaaea8708ae 100644 --- a/pkgs/desktops/plasma-5/srcs.nix +++ b/pkgs/desktops/plasma-5/srcs.nix @@ -3,323 +3,323 @@ { bluedevil = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/bluedevil-5.8.5.tar.xz"; - sha256 = "07gj3m5f0rk26n0xm4yddsfny6l2sh0airm45hb33p7m5inaqzgv"; - name = "bluedevil-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/bluedevil-5.8.6.tar.xz"; + sha256 = "0qz9v5wrx72s3r1shi3m77931kl7sx7p89dk3h9w1hy61bx0azlj"; + name = "bluedevil-5.8.6.tar.xz"; }; }; breeze = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/breeze-5.8.5.tar.xz"; - sha256 = "1gcns00iq7a5f1a0w6vf8zck669gzcd785fiybnvc6s6q8x4bp61"; - name = "breeze-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/breeze-5.8.6.tar.xz"; + sha256 = "16wxrmnlk359kapa6zj8hfcjjdffvmqc7ibzdxdd8xpdva01p7sm"; + name = "breeze-5.8.6.tar.xz"; }; }; breeze-grub = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/breeze-grub-5.8.5.tar.xz"; - sha256 = "12ynrxdfcraphbwv9yrfhvwf3xkzrw0raqvgi7ksz5cvh78kl5qf"; - name = "breeze-grub-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/breeze-grub-5.8.6.tar.xz"; + sha256 = "1ywlczid32a8z4rrjxc6c3b8q3l02a3b7scbxyljgfv7xzggj1fm"; + name = "breeze-grub-5.8.6.tar.xz"; }; }; breeze-gtk = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/breeze-gtk-5.8.5.tar.xz"; - sha256 = "15dx5hl9w9fiash30vgkbww6h7hck0dr42hh8gzysn0xyf0fzpgd"; - name = "breeze-gtk-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/breeze-gtk-5.8.6.tar.xz"; + sha256 = "1ppxsf868d2v9kmdz18hnbdwwqbs0xhpn7pc3bdxxj4gk87dpxpl"; + name = "breeze-gtk-5.8.6.tar.xz"; }; }; breeze-plymouth = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/breeze-plymouth-5.8.5.tar.xz"; - sha256 = "1ryb2jrzw0bzpi7ig4h5k0i33d2qviqsjxw7mnqxcb9q49a4ziq1"; - name = "breeze-plymouth-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/breeze-plymouth-5.8.6.tar.xz"; + sha256 = "0cdrl0ri4b5zbld8wb3hkmsncac6qn3mswvb7zp63br3jiqfg7v8"; + name = "breeze-plymouth-5.8.6.tar.xz"; }; }; discover = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/discover-5.8.5.tar.xz"; - sha256 = "0fr6mksqw46aghfzj78nlq3f89xd63vq2hr4c3gb4vkl5y8v08hg"; - name = "discover-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/discover-5.8.6.tar.xz"; + sha256 = "04smq3n0prs2bjq6sn5kd5mp4aay58nr2fg10yq39sgyp2qkls0r"; + name = "discover-5.8.6.tar.xz"; }; }; kactivitymanagerd = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kactivitymanagerd-5.8.5.tar.xz"; - sha256 = "07cqnbyznn5wy7vrqyid8h5ah7h3sb3pb30qlm83b4m29bkhggwh"; - name = "kactivitymanagerd-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kactivitymanagerd-5.8.6.tar.xz"; + sha256 = "0cxpf3aj22ap6m24gm1ybjykwv10ryqhpd4bv6wr748ckj5zsgh4"; + name = "kactivitymanagerd-5.8.6.tar.xz"; }; }; kde-cli-tools = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kde-cli-tools-5.8.5.tar.xz"; - sha256 = "1ig9x5h9xkzis9izggkjpiiy4sm77pk347jdngx01qpacz68iyp7"; - name = "kde-cli-tools-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kde-cli-tools-5.8.6.tar.xz"; + sha256 = "08j6mpn6g4mrdwiljfm5rqvyfjgd3wd4kpwmpmvrprqrd755m0cs"; + name = "kde-cli-tools-5.8.6.tar.xz"; }; }; kdecoration = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kdecoration-5.8.5.tar.xz"; - sha256 = "1vhw57pj9i5224i9irk4qmingvkg5bip11vsqiwhmn5307bpnfiq"; - name = "kdecoration-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kdecoration-5.8.6.tar.xz"; + sha256 = "0nbh0phgfzc5j1l1adnq3gn5fkazgk2pg2iiqjkfbax6a7r9wwny"; + name = "kdecoration-5.8.6.tar.xz"; }; }; kde-gtk-config = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kde-gtk-config-5.8.5.tar.xz"; - sha256 = "1j0mzmmdhqd3a8papps6cad0gqn081mc4kqzi2hjai7038l6951r"; - name = "kde-gtk-config-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kde-gtk-config-5.8.6.tar.xz"; + sha256 = "07in78awn7kqg47zbypj5lb2i9yibrmpzkljjy67wwcwax5zlm2d"; + name = "kde-gtk-config-5.8.6.tar.xz"; }; }; kdeplasma-addons = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kdeplasma-addons-5.8.5.tar.xz"; - sha256 = "181kagb4nbl9a7akk79slwkb7m2j4vyhabagih0z8l45wl5wrz9d"; - name = "kdeplasma-addons-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kdeplasma-addons-5.8.6.tar.xz"; + sha256 = "0yvh2n736apbfzqc5kdf3b0a9jyvlzcaamall1paa8jb8cg706px"; + name = "kdeplasma-addons-5.8.6.tar.xz"; }; }; kgamma5 = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kgamma5-5.8.5.tar.xz"; - sha256 = "073z4w4i2hwsqqgxcfl0w8d57nhzc069h9zwp7fv93aaw4mgzci2"; - name = "kgamma5-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kgamma5-5.8.6.tar.xz"; + sha256 = "1kk9bygihnggm4kmgxf1bbd0wc92ijmzvm9k5cmkm3v0pc975viz"; + name = "kgamma5-5.8.6.tar.xz"; }; }; khotkeys = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/khotkeys-5.8.5.tar.xz"; - sha256 = "1fh0z9vfb908nbwj3snkf9z55jbcb5id87k5sa0v8dhazmp91ylh"; - name = "khotkeys-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/khotkeys-5.8.6.tar.xz"; + sha256 = "0x6z025vzpccz0yql7nafcarq6rpw3p7d7wjffdck3lym8vkalxj"; + name = "khotkeys-5.8.6.tar.xz"; }; }; kinfocenter = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kinfocenter-5.8.5.tar.xz"; - sha256 = "1fksnb9klbcrr9ly6dd2yx5y1ngcwcln43zykpc76pr4i49jpggp"; - name = "kinfocenter-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kinfocenter-5.8.6.tar.xz"; + sha256 = "1d8h5h01dy7s1yaapamcz4dzf0pjdykf7jn8y34hc0djxww29k4b"; + name = "kinfocenter-5.8.6.tar.xz"; }; }; kmenuedit = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kmenuedit-5.8.5.tar.xz"; - sha256 = "1vq5f69w75lj81nz75db88lqxc4zvhicd5w7r6k7amggnwxm9f3m"; - name = "kmenuedit-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kmenuedit-5.8.6.tar.xz"; + sha256 = "0zvircfmggc4vwz6520i67s1yfv34zkx8ydj1vfhaabpsn7nqn1w"; + name = "kmenuedit-5.8.6.tar.xz"; }; }; kscreen = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kscreen-5.8.5.tar.xz"; - sha256 = "069x3vsfqirmq8r7yfa68srhjvygdwsxcj0b4vvb7zivs29zn1mh"; - name = "kscreen-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kscreen-5.8.6.tar.xz"; + sha256 = "15k8pm1k2ylxqb3x4b75zi68firsxq56qfn39xddxnzncbsqp54r"; + name = "kscreen-5.8.6.tar.xz"; }; }; kscreenlocker = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kscreenlocker-5.8.5.tar.xz"; - sha256 = "11b2v3chhk1ma5kjbmf35qahfr8gbaw78mcqs8vw5m9x74vlimkj"; - name = "kscreenlocker-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kscreenlocker-5.8.6.tar.xz"; + sha256 = "1cql5wq4zh8sdwlgwibnyyx169g79948nhdqslw08ddw61f9llgd"; + name = "kscreenlocker-5.8.6.tar.xz"; }; }; ksshaskpass = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/ksshaskpass-5.8.5.tar.xz"; - sha256 = "1gr48f4akrn0yhlnjw4yaas6ah5z40fb8iz06gi1dzry5axfmaxh"; - name = "ksshaskpass-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/ksshaskpass-5.8.6.tar.xz"; + sha256 = "0y912dcvdx6gih0brnxnd3cysw0rj5pw7684xswaqz5i8iimw68g"; + name = "ksshaskpass-5.8.6.tar.xz"; }; }; ksysguard = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/ksysguard-5.8.5.tar.xz"; - sha256 = "1gd81y2a459j5k1mpikfrvwcz7v09m526nrl7kpr4l4a1ps8zfy9"; - name = "ksysguard-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/ksysguard-5.8.6.tar.xz"; + sha256 = "0c0bxv5m0kziyqzwr6x46g4x2kahmq6n95kgcbihv74yvnn6v049"; + name = "ksysguard-5.8.6.tar.xz"; }; }; kwallet-pam = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kwallet-pam-5.8.5.tar.xz"; - sha256 = "0310vr3p9fxl3vwdgklk0acx6w31pcpq8mi9yldahg1mkjqf7l44"; - name = "kwallet-pam-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kwallet-pam-5.8.6.tar.xz"; + sha256 = "1ii1035w8xqvkbm0ckj5iq4qq7fnbix7vyvwmdjm8m4xm0rr7g33"; + name = "kwallet-pam-5.8.6.tar.xz"; }; }; kwayland-integration = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kwayland-integration-5.8.5.tar.xz"; - sha256 = "11f63mq7crsbrpdib16q8xg0hk8jr5x1cyv43q8qdqm0591cglli"; - name = "kwayland-integration-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kwayland-integration-5.8.6.tar.xz"; + sha256 = "0bd8hnqr6sqlzk0qrymk6jdxnl2niamb1a08m8d27qdybm0ga56v"; + name = "kwayland-integration-5.8.6.tar.xz"; }; }; kwin = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kwin-5.8.5.tar.xz"; - sha256 = "182z17d4sad9j15qagx9yz13wwzcyy6hlgpy5nlx6dlfcb8s00x7"; - name = "kwin-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kwin-5.8.6.tar.xz"; + sha256 = "1p9dgh6d25h41bgnx9jiyb9qg7jyc61kbzh9j9vy9j5kd97dsjg5"; + name = "kwin-5.8.6.tar.xz"; }; }; kwrited = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/kwrited-5.8.5.tar.xz"; - sha256 = "1nsr244niyq2bk29s0cqq1p2qj0h1hx4nl13nc3x3aycfhfkjfkr"; - name = "kwrited-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/kwrited-5.8.6.tar.xz"; + sha256 = "08frbgzfzqhi4si3v024lx4dypxvm60mdz2xzyyx482iqjny97d5"; + name = "kwrited-5.8.6.tar.xz"; }; }; libkscreen = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/libkscreen-5.8.5.tar.xz"; - sha256 = "1zj2nzyl0nmg5za3iwr4q4nzfv69f35f0394b6k0g3dgh1zxmby9"; - name = "libkscreen-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/libkscreen-5.8.6.tar.xz"; + sha256 = "0210lyvsk9wm7svj3bkaa9j0n57lfzs56jplasdqdia1450n7dmf"; + name = "libkscreen-5.8.6.tar.xz"; }; }; libksysguard = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/libksysguard-5.8.5.tar.xz"; - sha256 = "1acp4kzdjhipsqw90n3rc1ydbkqhb12afwdsfl25fibv0c39avwp"; - name = "libksysguard-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/libksysguard-5.8.6.tar.xz"; + sha256 = "0i325hzl9zsknkr1dcdg64r4msrnvbb4b9rmjysygnpyll6n9bm8"; + name = "libksysguard-5.8.6.tar.xz"; }; }; milou = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/milou-5.8.5.tar.xz"; - sha256 = "0lj5cb43jkqs8qg2acs39dkfwskbw135ap65vxiv27ivxscyvz3d"; - name = "milou-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/milou-5.8.6.tar.xz"; + sha256 = "00svi7f9pa1m6gxkkf8vngyf4jzv7k88pbcnlvik38zws17j4vbs"; + name = "milou-5.8.6.tar.xz"; }; }; oxygen = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/oxygen-5.8.5.tar.xz"; - sha256 = "199jcn6qzyihxmw38b1cl0ah0rzn7f574khx72n9x5y9143p9lh7"; - name = "oxygen-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/oxygen-5.8.6.tar.xz"; + sha256 = "1dspmzjmymnnv6blz2sfw0ynpqbw6cqzvhlnmzakf3xq8jd99k0m"; + name = "oxygen-5.8.6.tar.xz"; }; }; plasma-desktop = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-desktop-5.8.5.tar.xz"; - sha256 = "045990fvhqpwhfi6jqpkzhgbhc3lwvwhkia1y77m12n1djbynpnr"; - name = "plasma-desktop-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-desktop-5.8.6.tar.xz"; + sha256 = "10qz1r777wr8wdr5lb7fph8ny8sxbm9vlq6njpn9rxxwr0nhlp6y"; + name = "plasma-desktop-5.8.6.tar.xz"; }; }; plasma-integration = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-integration-5.8.5.tar.xz"; - sha256 = "1sm7027ywz8xxqfsjv6jvk8zx11kx83rx88bb8cy31qfjipsakfb"; - name = "plasma-integration-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-integration-5.8.6.tar.xz"; + sha256 = "0v07i95xxv5rp0lis2xm0p66qicbigqjlx3sxyvcj3llf73jpcnc"; + name = "plasma-integration-5.8.6.tar.xz"; }; }; plasma-nm = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-nm-5.8.5.tar.xz"; - sha256 = "1g1yyzc8y2hsgycficvavpl5yizd54ns93cdky9cgsrnxlkfwbvc"; - name = "plasma-nm-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-nm-5.8.6.tar.xz"; + sha256 = "162756r2rif415w8x6x67h8bwjvvmfv56s84p7a4k5zisyr1j678"; + name = "plasma-nm-5.8.6.tar.xz"; }; }; plasma-pa = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-pa-5.8.5.tar.xz"; - sha256 = "0vg1dyxfg8rxzyh0xnk41c95zp8rdbx1w462llrwchzp29p3xg1b"; - name = "plasma-pa-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-pa-5.8.6.tar.xz"; + sha256 = "173w2ks2nm4sp96vj3pkax1d8asshd9y39m5cwq8mgzgpz6ldjp8"; + name = "plasma-pa-5.8.6.tar.xz"; }; }; plasma-sdk = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-sdk-5.8.5.tar.xz"; - sha256 = "13lyb5x4a8aq4fykvdv1137yvc4s4q31fdxhxppza1wkw8lvbvpd"; - name = "plasma-sdk-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-sdk-5.8.6.tar.xz"; + sha256 = "1vadfwv23r33f5byaf3zj8m12a84r4qk24ak7qyq869m9gznyw8r"; + name = "plasma-sdk-5.8.6.tar.xz"; }; }; plasma-tests = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-tests-5.8.5.tar.xz"; - sha256 = "0wgqyqlqygi3z0cccpfrpi259jp4yhh2g4x3mqcxisv58mbjrj1b"; - name = "plasma-tests-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-tests-5.8.6.tar.xz"; + sha256 = "0baqfn861jy7kmaqka79k6nkr7vivzymk8jy3glkh21rm4yl8gvh"; + name = "plasma-tests-5.8.6.tar.xz"; }; }; plasma-workspace = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-workspace-5.8.5.tar.xz"; - sha256 = "18bf5wmyb198jnbpivjjwsk65sksrvzlvykx3mr3wvj30mr0f9bd"; - name = "plasma-workspace-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-workspace-5.8.6.tar.xz"; + sha256 = "14h1lmyyb4rxnww7vyn9wnsi56v9ydhpbwmk9sv3zj1k9igqpasi"; + name = "plasma-workspace-5.8.6.tar.xz"; }; }; plasma-workspace-wallpapers = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/plasma-workspace-wallpapers-5.8.5.tar.xz"; - sha256 = "116s9qw888lbgxc9ggxf7fa99vggixr2ig1715xb5zmqm14yznyz"; - name = "plasma-workspace-wallpapers-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/plasma-workspace-wallpapers-5.8.6.tar.xz"; + sha256 = "11s2sc37xni78fyb0yvnhlkw6ahhx4pkynqr06bmd9vq6c3133id"; + name = "plasma-workspace-wallpapers-5.8.6.tar.xz"; }; }; polkit-kde-agent = { - version = "1-5.8.5"; + version = "1-5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/polkit-kde-agent-1-5.8.5.tar.xz"; - sha256 = "1dwk848wljcd9bi0h58h0ljnjlz1qq50rd7i38f3cb848iipisw7"; - name = "polkit-kde-agent-1-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/polkit-kde-agent-1-5.8.6.tar.xz"; + sha256 = "10bglbr7svm9bfl4a5kfyvj5zpyk46hsyh2rq9z9qy9ds76fh9w2"; + name = "polkit-kde-agent-1-5.8.6.tar.xz"; }; }; powerdevil = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/powerdevil-5.8.5.tar.xz"; - sha256 = "0lj7jcaqfsipiwi7x4q684p4pfsqzflvddr7hrhirfl1p62bc704"; - name = "powerdevil-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/powerdevil-5.8.6.tar.xz"; + sha256 = "0cmyx267z917qqpndpzqzlgzx1hf54430644rhr7cf9iqqilvnv4"; + name = "powerdevil-5.8.6.tar.xz"; }; }; sddm-kcm = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/sddm-kcm-5.8.5.tar.xz"; - sha256 = "0dcvk3f3cqq4z5hc63ccpxyl3kknjvd8jsnx7r2hfrwsw0y90fqc"; - name = "sddm-kcm-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/sddm-kcm-5.8.6.tar.xz"; + sha256 = "0xd8137pb0409vfiwv5n1vzzwa1vcvf3rgc36fid5hnlrdc15ilc"; + name = "sddm-kcm-5.8.6.tar.xz"; }; }; systemsettings = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/systemsettings-5.8.5.tar.xz"; - sha256 = "0pkwmgbjglbyc8i22hivh5gnaj742df3ff3f998k66k81mfjkwga"; - name = "systemsettings-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/systemsettings-5.8.6.tar.xz"; + sha256 = "1zy037pb8w9xbzg316hbqfmfm39aylqngb5v08yn5hcnvxcll71v"; + name = "systemsettings-5.8.6.tar.xz"; }; }; user-manager = { - version = "5.8.5"; + version = "5.8.6"; src = fetchurl { - url = "${mirror}/stable/plasma/5.8.5/user-manager-5.8.5.tar.xz"; - sha256 = "1ck8x860q3aqgbbgiwfdhs0i0bs2nhqqva19kl9x1b015p64gl5z"; - name = "user-manager-5.8.5.tar.xz"; + url = "${mirror}/stable/plasma/5.8.6/user-manager-5.8.6.tar.xz"; + sha256 = "1z0aj5cvl5rxikbbvrvg0dq6y68jxm34ssf3gvhkd0jqlyqdl7ip"; + name = "user-manager-5.8.6.tar.xz"; }; }; } From e02b544e4d131d0f8223a84b56b146361d4be838 Mon Sep 17 00:00:00 2001 From: Thomas Tuegel Date: Mon, 27 Feb 2017 11:01:51 -0600 Subject: [PATCH 193/216] ark: Make free by default --- pkgs/applications/kde/ark/default.nix | 16 ++++++++++------ 1 file changed, 10 insertions(+), 6 deletions(-) diff --git a/pkgs/applications/kde/ark/default.nix b/pkgs/applications/kde/ark/default.nix index f3adf1828de..e1e25b2acf2 100644 --- a/pkgs/applications/kde/ark/default.nix +++ b/pkgs/applications/kde/ark/default.nix @@ -1,5 +1,5 @@ { - kdeApp, lib, kdeWrapper, + kdeApp, lib, config, kdeWrapper, extra-cmake-modules, kdoctools, makeWrapper, @@ -7,7 +7,10 @@ kservice, kpty, kwidgetsaddons, libarchive, # Archive tools - p7zip, unrar, unzipNLS, zip + p7zip, unzipNLS, zip, + + # Unfree tools + unfreeEnableUnrar ? false, unrar, }: let @@ -23,15 +26,16 @@ let ]; postInstall = let - PATH = lib.makeBinPath [ - p7zip unrar unzipNLS zip - ]; + PATH = + lib.makeBinPath + ([ p7zip unzipNLS zip ] ++ lib.optional unfreeEnableUnrar unrar); in '' wrapProgram "$out/bin/ark" \ --prefix PATH : "${PATH}" ''; meta = { - license = with lib.licenses; [ gpl2 lgpl3 ]; + license = with lib.licenses; + [ gpl2 lgpl3 ] ++ lib.optional unfreeEnableUnrar unfree; maintainers = [ lib.maintainers.ttuegel ]; }; }; From 8def08a56cf304fbc55090b280e35b798b72055a Mon Sep 17 00:00:00 2001 From: Dan Peebles Date: Mon, 27 Feb 2017 18:32:09 +0000 Subject: [PATCH 194/216] apache-kafka.service: pass in log4j config more explicitly The implicit behavior of pulling it out of the classpath seemed not to work properly and could be thrown off by other things on the classpath also providing the properties file. This guarantees that our settings stick. --- nixos/modules/services/misc/apache-kafka.nix | 14 +++++--------- 1 file changed, 5 insertions(+), 9 deletions(-) diff --git a/nixos/modules/services/misc/apache-kafka.nix b/nixos/modules/services/misc/apache-kafka.nix index cff05339688..82fa1cc2e7e 100644 --- a/nixos/modules/services/misc/apache-kafka.nix +++ b/nixos/modules/services/misc/apache-kafka.nix @@ -19,13 +19,8 @@ let ${toString cfg.extraProperties} ''; - configDir = pkgs.buildEnv { - name = "apache-kafka-conf"; - paths = [ - (pkgs.writeTextDir "server.properties" serverProperties) - (pkgs.writeTextDir "log4j.properties" cfg.log4jProperties) - ]; - }; + serverConfig = pkgs.writeText "server.properties" serverProperties; + logConfig = pkgs.writeText "log4j.properties" cfg.log4jProperties; in { @@ -143,10 +138,11 @@ in { serviceConfig = { ExecStart = '' ${pkgs.jre}/bin/java \ - -cp "${cfg.package}/libs/*:${configDir}" \ + -cp "${cfg.package}/libs/*" \ + -Dlog4j.configuration=file:${logConfig} \ ${toString cfg.jvmOptions} \ kafka.Kafka \ - ${configDir}/server.properties + ${serverConfig} ''; User = "apache-kafka"; PermissionsStartOnly = true; From c1f8c0879cb9e4d21f18b2332111ef1191753c41 Mon Sep 17 00:00:00 2001 From: Maximilian Bosch Date: Mon, 27 Feb 2017 19:36:30 +0100 Subject: [PATCH 195/216] nodePackages.yo: init at 1.8.5 --- .../node-packages/node-packages-v4.nix | 3588 +++++++++++++---- .../node-packages/node-packages-v6.nix | 2677 ++++++++---- .../node-packages/node-packages.json | 1 + 3 files changed, 4574 insertions(+), 1692 deletions(-) diff --git a/pkgs/development/node-packages/node-packages-v4.nix b/pkgs/development/node-packages/node-packages-v4.nix index ceebd52b61c..af5e09054e2 100644 --- a/pkgs/development/node-packages/node-packages-v4.nix +++ b/pkgs/development/node-packages/node-packages-v4.nix @@ -67,22 +67,22 @@ let sha1 = "3cf436dcc9f3477ef3d7fa55a5bdf6d893f1c6c6"; }; }; - "uglify-js-2.4.15" = { + "uglify-js-2.6.1" = { name = "uglify-js"; packageName = "uglify-js"; - version = "2.4.15"; + version = "2.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.4.15.tgz"; - sha1 = "12bc6d84345fbc306e13f7075d6437a8bf64d7e3"; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.6.1.tgz"; + sha1 = "edbbe1888ba3525ded3a7bf836b30b3405d3161b"; }; }; - "resolve-1.2.0" = { + "resolve-1.3.2" = { name = "resolve"; packageName = "resolve"; - version = "1.2.0"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/resolve/-/resolve-1.2.0.tgz"; - sha1 = "9589c3f2f6149d1417a40becc1663db6ec6bc26c"; + url = "https://registry.npmjs.org/resolve/-/resolve-1.3.2.tgz"; + sha1 = "1f0442c9e0cbb8136e87b9305f932f46c7f28235"; }; }; "global-paths-0.1.2" = { @@ -112,13 +112,13 @@ let sha1 = "d76a310d6b8a7ba9e4825bb3d43f5427e9fe8f6e"; }; }; - "moment-2.10.6" = { + "moment-2.17.1" = { name = "moment"; packageName = "moment"; - version = "2.10.6"; + version = "2.17.1"; src = fetchurl { - url = "https://registry.npmjs.org/moment/-/moment-2.10.6.tgz"; - sha1 = "6cb21967c79cba7b0ca5e66644f173662b3efa77"; + url = "https://registry.npmjs.org/moment/-/moment-2.17.1.tgz"; + sha1 = "fed9506063f36b10f066c8b59a144d7faebe1d82"; }; }; "node.extend-1.0.10" = { @@ -202,22 +202,13 @@ let sha1 = "b6bbe0b0674b9d719708ca38de8c237cb526c3d1"; }; }; - "source-map-0.1.34" = { + "source-map-0.5.6" = { name = "source-map"; packageName = "source-map"; - version = "0.1.34"; + version = "0.5.6"; src = fetchurl { - url = "https://registry.npmjs.org/source-map/-/source-map-0.1.34.tgz"; - sha1 = "a7cfe89aec7b1682c3b198d0acfb47d7d090566b"; - }; - }; - "optimist-0.3.7" = { - name = "optimist"; - packageName = "optimist"; - version = "0.3.7"; - src = fetchurl { - url = "https://registry.npmjs.org/optimist/-/optimist-0.3.7.tgz"; - sha1 = "c90941ad59e4273328923074d2cf2e7cbc6ec0d9"; + url = "https://registry.npmjs.org/source-map/-/source-map-0.5.6.tgz"; + sha1 = "75ce38f52bf0733c5a7f0c118d81334a2bb5f412"; }; }; "uglify-to-browserify-1.0.2" = { @@ -229,22 +220,139 @@ let sha1 = "6e0924d6bda6b5afe349e39a6d632850a0f882b7"; }; }; - "amdefine-1.0.1" = { - name = "amdefine"; - packageName = "amdefine"; - version = "1.0.1"; + "yargs-3.10.0" = { + name = "yargs"; + packageName = "yargs"; + version = "3.10.0"; src = fetchurl { - url = "https://registry.npmjs.org/amdefine/-/amdefine-1.0.1.tgz"; - sha1 = "4a5282ac164729e93619bcfd3ad151f817ce91f5"; + url = "https://registry.npmjs.org/yargs/-/yargs-3.10.0.tgz"; + sha1 = "f7ee7bd857dd7c1d2d38c0e74efbd681d1431fd1"; }; }; - "wordwrap-0.0.3" = { + "camelcase-1.2.1" = { + name = "camelcase"; + packageName = "camelcase"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/camelcase/-/camelcase-1.2.1.tgz"; + sha1 = "9bb5304d2e0b56698b2c758b08a3eaa9daa58a39"; + }; + }; + "cliui-2.1.0" = { + name = "cliui"; + packageName = "cliui"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/cliui/-/cliui-2.1.0.tgz"; + sha1 = "4b475760ff80264c762c3a1719032e91c7fea0d1"; + }; + }; + "decamelize-1.2.0" = { + name = "decamelize"; + packageName = "decamelize"; + version = "1.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/decamelize/-/decamelize-1.2.0.tgz"; + sha1 = "f6534d15148269b20352e7bee26f501f9a191290"; + }; + }; + "window-size-0.1.0" = { + name = "window-size"; + packageName = "window-size"; + version = "0.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/window-size/-/window-size-0.1.0.tgz"; + sha1 = "5438cd2ea93b202efa3a19fe8887aee7c94f9c9d"; + }; + }; + "center-align-0.1.3" = { + name = "center-align"; + packageName = "center-align"; + version = "0.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/center-align/-/center-align-0.1.3.tgz"; + sha1 = "aa0d32629b6ee972200411cbd4461c907bc2b7ad"; + }; + }; + "right-align-0.1.3" = { + name = "right-align"; + packageName = "right-align"; + version = "0.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/right-align/-/right-align-0.1.3.tgz"; + sha1 = "61339b722fe6a3515689210d24e14c96148613ef"; + }; + }; + "wordwrap-0.0.2" = { name = "wordwrap"; packageName = "wordwrap"; - version = "0.0.3"; + version = "0.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.3.tgz"; - sha1 = "a3d5da6cd5c0bc0008d37234bbaf1bed63059107"; + url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.2.tgz"; + sha1 = "b79669bb42ecb409f83d583cad52ca17eaa1643f"; + }; + }; + "align-text-0.1.4" = { + name = "align-text"; + packageName = "align-text"; + version = "0.1.4"; + src = fetchurl { + url = "https://registry.npmjs.org/align-text/-/align-text-0.1.4.tgz"; + sha1 = "0cd90a561093f35d0a99256c22b7069433fad117"; + }; + }; + "lazy-cache-1.0.4" = { + name = "lazy-cache"; + packageName = "lazy-cache"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/lazy-cache/-/lazy-cache-1.0.4.tgz"; + sha1 = "a1d78fc3a50474cb80845d3b3b6e1da49a446e8e"; + }; + }; + "kind-of-3.1.0" = { + name = "kind-of"; + packageName = "kind-of"; + version = "3.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/kind-of/-/kind-of-3.1.0.tgz"; + sha1 = "475d698a5e49ff5e53d14e3e732429dc8bf4cf47"; + }; + }; + "longest-1.0.1" = { + name = "longest"; + packageName = "longest"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/longest/-/longest-1.0.1.tgz"; + sha1 = "30a0b2da38f73770e8294a0d22e6625ed77d0097"; + }; + }; + "repeat-string-1.6.1" = { + name = "repeat-string"; + packageName = "repeat-string"; + version = "1.6.1"; + src = fetchurl { + url = "https://registry.npmjs.org/repeat-string/-/repeat-string-1.6.1.tgz"; + sha1 = "8dcae470e1c88abc2d600fff4a776286da75e637"; + }; + }; + "is-buffer-1.1.4" = { + name = "is-buffer"; + packageName = "is-buffer"; + version = "1.1.4"; + src = fetchurl { + url = "https://registry.npmjs.org/is-buffer/-/is-buffer-1.1.4.tgz"; + sha1 = "cfc86ccd5dc5a52fa80489111c6920c457e2d98b"; + }; + }; + "path-parse-1.0.5" = { + name = "path-parse"; + packageName = "path-parse"; + version = "1.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/path-parse/-/path-parse-1.0.5.tgz"; + sha1 = "3c1adf871ea9cd6c9431b6ea2bd74a0ff055c4c1"; }; }; "array-unique-0.2.1" = { @@ -337,6 +445,15 @@ let sha1 = "36f3e22e60750920f5e7241a476a8c6a42275ad0"; }; }; + "amdefine-1.0.1" = { + name = "amdefine"; + packageName = "amdefine"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/amdefine/-/amdefine-1.0.1.tgz"; + sha1 = "4a5282ac164729e93619bcfd3ad151f817ce91f5"; + }; + }; "xml2js-0.2.8" = { name = "xml2js"; packageName = "xml2js"; @@ -490,13 +607,13 @@ let sha1 = "937f87a8aeceb641a8210a9ba837323f0206eb47"; }; }; - "azure-arm-network-0.17.0" = { + "azure-arm-network-0.18.0" = { name = "azure-arm-network"; packageName = "azure-arm-network"; - version = "0.17.0"; + version = "0.18.0"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-network/-/azure-arm-network-0.17.0.tgz"; - sha1 = "97371f42301b40d56757f340c0dd0ed34984cdd6"; + url = "https://registry.npmjs.org/azure-arm-network/-/azure-arm-network-0.18.0.tgz"; + sha1 = "0ebfe1adbdfdc535d6c95e3713a5c54b5144932f"; }; }; "azure-arm-powerbiembedded-0.1.0" = { @@ -643,13 +760,13 @@ let sha1 = "aa9a49fb9081a210f2f4cc6596ca4653b68306e6"; }; }; - "azure-arm-storage-0.13.1-preview" = { + "azure-arm-storage-0.15.0-preview" = { name = "azure-arm-storage"; packageName = "azure-arm-storage"; - version = "0.13.1-preview"; + version = "0.15.0-preview"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-storage/-/azure-arm-storage-0.13.1-preview.tgz"; - sha1 = "9342515a44e632c48f1d0d9c7a98214ed563d8f7"; + url = "https://registry.npmjs.org/azure-arm-storage/-/azure-arm-storage-0.15.0-preview.tgz"; + sha1 = "e25c13a1e716656caa019a7bc9fabe05c5062b7e"; }; }; "azure-asm-sb-0.10.1" = { @@ -697,13 +814,13 @@ let sha1 = "bfd0c01a8ae6afd90eaa13360976242e28459650"; }; }; - "azure-storage-1.3.0" = { + "azure-storage-2.0.0" = { name = "azure-storage"; packageName = "azure-storage"; - version = "1.3.0"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/azure-storage/-/azure-storage-1.3.0.tgz"; - sha1 = "314c66699211cd065bb4f7ec98f27b2e533b48ce"; + url = "https://registry.npmjs.org/azure-storage/-/azure-storage-2.0.0.tgz"; + sha1 = "581ed1245ee105e818806efd5cc5cc4c14eab7c0"; }; }; "azure-arm-batch-0.3.0" = { @@ -850,40 +967,31 @@ let sha1 = "bd0a7040d426d7598d6c742ec8f875d0e88644a9"; }; }; - "kuduscript-1.0.9" = { + "kuduscript-1.0.13" = { name = "kuduscript"; packageName = "kuduscript"; - version = "1.0.9"; + version = "1.0.13"; src = fetchurl { - url = "https://registry.npmjs.org/kuduscript/-/kuduscript-1.0.9.tgz"; - sha1 = "28e039af12be00c4d1d890dc243afcfe2b25298a"; + url = "https://registry.npmjs.org/kuduscript/-/kuduscript-1.0.13.tgz"; + sha1 = "c74349b2092608bb0f3dc827c516ef2fddb8238e"; }; }; - "moment-2.17.1" = { - name = "moment"; - packageName = "moment"; - version = "2.17.1"; - src = fetchurl { - url = "https://registry.npmjs.org/moment/-/moment-2.17.1.tgz"; - sha1 = "fed9506063f36b10f066c8b59a144d7faebe1d82"; - }; - }; - "ms-rest-1.15.4" = { + "ms-rest-1.15.5" = { name = "ms-rest"; packageName = "ms-rest"; - version = "1.15.4"; + version = "1.15.5"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest/-/ms-rest-1.15.4.tgz"; - sha1 = "7af7038fe843fd89d407fec346320db6b010ef8c"; + url = "https://registry.npmjs.org/ms-rest/-/ms-rest-1.15.5.tgz"; + sha1 = "b207a9c447f7fca3adca701feccc2c1907b1431d"; }; }; - "ms-rest-azure-1.15.4" = { + "ms-rest-azure-1.15.5" = { name = "ms-rest-azure"; packageName = "ms-rest-azure"; - version = "1.15.4"; + version = "1.15.5"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-1.15.4.tgz"; - sha1 = "ea89bce23c6ddd4593db1e86f6557cc6374e3492"; + url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-1.15.5.tgz"; + sha1 = "8fbb1366ecca18ce59010473dc0228b5a32c5611"; }; }; "node-forge-0.6.23" = { @@ -895,13 +1003,13 @@ let sha1 = "f03cf65ebd5d4d9dd2f7becb57ceaf78ed94a2bf"; }; }; - "omelette-0.1.0" = { + "omelette-0.3.2" = { name = "omelette"; packageName = "omelette"; - version = "0.1.0"; + version = "0.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/omelette/-/omelette-0.1.0.tgz"; - sha1 = "31cc7eb472a513c07483d24d3e1bf164cb0d23b8"; + url = "https://registry.npmjs.org/omelette/-/omelette-0.3.2.tgz"; + sha1 = "68c1b3c57ced778b4e67d8637d2559b2c1b3ec26"; }; }; "openssl-wrapper-0.2.1" = { @@ -1048,15 +1156,6 @@ let sha1 = "3c9349d196207fd1bdff9d4bc43ef72510e3a12e"; }; }; - "wordwrap-0.0.2" = { - name = "wordwrap"; - packageName = "wordwrap"; - version = "0.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.2.tgz"; - sha1 = "b79669bb42ecb409f83d583cad52ca17eaa1643f"; - }; - }; "xml2js-0.1.14" = { name = "xml2js"; packageName = "xml2js"; @@ -1246,15 +1345,6 @@ let sha1 = "b35b27c47e57ed2ddc70053d6b07becdb291741c"; }; }; - "extend-1.2.1" = { - name = "extend"; - packageName = "extend"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/extend/-/extend-1.2.1.tgz"; - sha1 = "a0f5fd6cfc83a5fe49ef698d60ec8a624dd4576c"; - }; - }; "browserify-mime-1.2.9" = { name = "browserify-mime"; packageName = "browserify-mime"; @@ -1264,6 +1354,15 @@ let sha1 = "aeb1af28de6c0d7a6a2ce40adb68ff18422af31f"; }; }; + "extend-1.2.1" = { + name = "extend"; + packageName = "extend"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/extend/-/extend-1.2.1.tgz"; + sha1 = "a0f5fd6cfc83a5fe49ef698d60ec8a624dd4576c"; + }; + }; "json-edm-parser-0.1.2" = { name = "json-edm-parser"; packageName = "json-edm-parser"; @@ -1273,6 +1372,15 @@ let sha1 = "1e60b0fef1bc0af67bc0d146dfdde5486cd615b4"; }; }; + "md5.js-1.3.4" = { + name = "md5.js"; + packageName = "md5.js"; + version = "1.3.4"; + src = fetchurl { + url = "https://registry.npmjs.org/md5.js/-/md5.js-1.3.4.tgz"; + sha1 = "e9bdbde94a20a5ac18b04340fc5764d5b09d901d"; + }; + }; "readable-stream-2.0.6" = { name = "readable-stream"; packageName = "readable-stream"; @@ -1291,13 +1399,13 @@ let sha1 = "5c0c5685107160e72fe7489bddea0b44c2bc67bd"; }; }; - "core-util-is-1.0.2" = { - name = "core-util-is"; - packageName = "core-util-is"; - version = "1.0.2"; + "hash-base-3.0.3" = { + name = "hash-base"; + packageName = "hash-base"; + version = "3.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/core-util-is/-/core-util-is-1.0.2.tgz"; - sha1 = "b5fd54220aa2bc5ab57aab7140c940754503c1a7"; + url = "https://registry.npmjs.org/hash-base/-/hash-base-3.0.3.tgz"; + sha1 = "87ec48734bfe354275535150b14821566b083807"; }; }; "inherits-2.0.3" = { @@ -1309,6 +1417,15 @@ let sha1 = "633c2c83e3da42a502f52466022480f4208261de"; }; }; + "core-util-is-1.0.2" = { + name = "core-util-is"; + packageName = "core-util-is"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/core-util-is/-/core-util-is-1.0.2.tgz"; + sha1 = "b5fd54220aa2bc5ab57aab7140c940754503c1a7"; + }; + }; "isarray-1.0.0" = { name = "isarray"; packageName = "isarray"; @@ -1525,13 +1642,13 @@ let sha1 = "abcc6cbd3ec2ed2a729ff6e7c1fa8f01784a8574"; }; }; - "rimraf-2.5.4" = { + "rimraf-2.6.1" = { name = "rimraf"; packageName = "rimraf"; - version = "2.5.4"; + version = "2.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/rimraf/-/rimraf-2.5.4.tgz"; - sha1 = "96800093cbf1a0c86bd95b4625467535c29dfa04"; + url = "https://registry.npmjs.org/rimraf/-/rimraf-2.6.1.tgz"; + sha1 = "c2338ec643df7a1b7fe5c54fa86f57428a55f33d"; }; }; "minimist-0.0.8" = { @@ -1813,13 +1930,13 @@ let sha1 = "46a6ab7f0aead8deae9ec0565780b7d4efeb9d43"; }; }; - "qs-6.2.1" = { + "qs-6.2.2" = { name = "qs"; packageName = "qs"; - version = "6.2.1"; + version = "6.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.2.1.tgz"; - sha1 = "ce03c5ff0935bc1d9d69a9f14cbd18e568d67625"; + url = "https://registry.npmjs.org/qs/-/qs-6.2.2.tgz"; + sha1 = "d506a5ad5b2cae1fd35c4f54ec182e267e3ef586"; }; }; "stringstream-0.0.5" = { @@ -1858,13 +1975,13 @@ let sha1 = "df3ae199acadfb7d440aaae0b29e2272b24ec619"; }; }; - "async-2.1.4" = { + "async-2.1.5" = { name = "async"; packageName = "async"; - version = "2.1.4"; + version = "2.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/async/-/async-2.1.4.tgz"; - sha1 = "2d2160c7788032e4dd6cbe2502f1f9a2c8f6cde4"; + url = "https://registry.npmjs.org/async/-/async-2.1.5.tgz"; + sha1 = "e587c68580994ac67fc56ff86d3ac56bdbe810bc"; }; }; "lodash-4.17.4" = { @@ -1894,13 +2011,13 @@ let sha1 = "9c99094176e12240cb22d6c5146098400fe0f7d4"; }; }; - "is-my-json-valid-2.15.0" = { + "is-my-json-valid-2.16.0" = { name = "is-my-json-valid"; packageName = "is-my-json-valid"; - version = "2.15.0"; + version = "2.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.15.0.tgz"; - sha1 = "936edda3ca3c211fd98f3b2d3e08da43f7b2915b"; + url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.16.0.tgz"; + sha1 = "f079dd9bfdae65ee2038aae8acbc86ab109e3693"; }; }; "pinkie-promise-2.0.1" = { @@ -2299,13 +2416,13 @@ let sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; }; - "readable-stream-2.2.2" = { + "readable-stream-2.2.3" = { name = "readable-stream"; packageName = "readable-stream"; - version = "2.2.2"; + version = "2.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.2.2.tgz"; - sha1 = "a9e6fec3c7dda85f8bb1b3ba7028604556fc825e"; + url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.2.3.tgz"; + sha1 = "9cf49463985df016c8ae8813097a9293a9b33729"; }; }; "buffer-shims-1.0.0" = { @@ -2335,13 +2452,13 @@ let sha1 = "489654c692616b8aa55b0724fa809bb7db49c5bf"; }; }; - "qs-6.3.0" = { + "qs-6.3.1" = { name = "qs"; packageName = "qs"; - version = "6.3.0"; + version = "6.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.3.0.tgz"; - sha1 = "f403b264f23bc01228c74131b407f18d5ea5d442"; + url = "https://registry.npmjs.org/qs/-/qs-6.3.1.tgz"; + sha1 = "918c0b3bcd36679772baf135b1acb4c1651ed79d"; }; }; "asap-2.0.5" = { @@ -2713,15 +2830,6 @@ let sha1 = "308beeaffdf28119051efa1d932213c91b8f92e7"; }; }; - "decamelize-1.2.0" = { - name = "decamelize"; - packageName = "decamelize"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decamelize/-/decamelize-1.2.0.tgz"; - sha1 = "f6534d15148269b20352e7bee26f501f9a191290"; - }; - }; "loud-rejection-1.6.0" = { name = "loud-rejection"; packageName = "loud-rejection"; @@ -3145,13 +3253,13 @@ let sha1 = "e439be2aaee327321952730f99a8929e4fc50582"; }; }; - "JSONStream-1.3.0" = { + "JSONStream-1.3.1" = { name = "JSONStream"; packageName = "JSONStream"; - version = "1.3.0"; + version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.0.tgz"; - sha1 = "680ab9ac6572a8a1a207e0b38721db1c77b215e5"; + url = "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.1.tgz"; + sha1 = "707f761e01dae9e16f1bcf93703b78c70966579a"; }; }; "assert-1.4.1" = { @@ -3199,13 +3307,13 @@ let sha1 = "35c9393244a90aff83581063d16f0882cecc9418"; }; }; - "cached-path-relative-1.0.0" = { + "cached-path-relative-1.0.1" = { name = "cached-path-relative"; packageName = "cached-path-relative"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/cached-path-relative/-/cached-path-relative-1.0.0.tgz"; - sha1 = "d1094c577fbd9a8b8bd43c96af6188aa205d05f4"; + url = "https://registry.npmjs.org/cached-path-relative/-/cached-path-relative-1.0.1.tgz"; + sha1 = "d09c4b52800aa4c078e2dd81a869aac90d2e54e7"; }; }; "concat-stream-1.5.2" = { @@ -3334,13 +3442,13 @@ let sha1 = "a52e1d138024c00b86b1c0c91f677918b8ae0a59"; }; }; - "module-deps-4.0.8" = { + "module-deps-4.1.1" = { name = "module-deps"; packageName = "module-deps"; - version = "4.0.8"; + version = "4.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/module-deps/-/module-deps-4.0.8.tgz"; - sha1 = "55fd70623399706c3288bef7a609ff1e8c0ed2bb"; + url = "https://registry.npmjs.org/module-deps/-/module-deps-4.1.1.tgz"; + sha1 = "23215833f1da13fd606ccb8087b44852dcb821fd"; }; }; "os-browserify-0.1.2" = { @@ -3568,15 +3676,6 @@ let sha1 = "2dcbd2c287cbc0a55cc42328bd0c736150d53e3f"; }; }; - "source-map-0.5.6" = { - name = "source-map"; - packageName = "source-map"; - version = "0.5.6"; - src = fetchurl { - url = "https://registry.npmjs.org/source-map/-/source-map-0.5.6.tgz"; - sha1 = "75ce38f52bf0733c5a7f0c118d81334a2bb5f412"; - }; - }; "resolve-1.1.7" = { name = "resolve"; packageName = "resolve"; @@ -3784,13 +3883,13 @@ let sha1 = "21e0abfaf6f2029cf2fafb133567a701d4135524"; }; }; - "elliptic-6.3.3" = { + "elliptic-6.4.0" = { name = "elliptic"; packageName = "elliptic"; - version = "6.3.3"; + version = "6.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/elliptic/-/elliptic-6.3.3.tgz"; - sha1 = "5482d9646d54bcb89fd7d994fc9e2e9568876e3f"; + url = "https://registry.npmjs.org/elliptic/-/elliptic-6.4.0.tgz"; + sha1 = "cac9af8762c85836187003c8dfe193e5e2eae5df"; }; }; "parse-asn1-5.0.0" = { @@ -3802,13 +3901,13 @@ let sha1 = "35060f6d5015d37628c770f4e091a0b5a278bc23"; }; }; - "brorand-1.0.7" = { + "brorand-1.1.0" = { name = "brorand"; packageName = "brorand"; - version = "1.0.7"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/brorand/-/brorand-1.0.7.tgz"; - sha1 = "6677fa5e4901bdbf9c9ec2a748e28dca407a9bfc"; + url = "https://registry.npmjs.org/brorand/-/brorand-1.1.0.tgz"; + sha1 = "12c25efe40a45e3c323eb8675a0a0ce57b22371f"; }; }; "hash.js-1.0.3" = { @@ -3820,6 +3919,24 @@ let sha1 = "1332ff00156c0a0ffdd8236013d07b77a0451573"; }; }; + "hmac-drbg-1.0.0" = { + name = "hmac-drbg"; + packageName = "hmac-drbg"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/hmac-drbg/-/hmac-drbg-1.0.0.tgz"; + sha1 = "3db471f45aae4a994a0688322171f51b8b91bee5"; + }; + }; + "minimalistic-crypto-utils-1.0.1" = { + name = "minimalistic-crypto-utils"; + packageName = "minimalistic-crypto-utils"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/minimalistic-crypto-utils/-/minimalistic-crypto-utils-1.0.1.tgz"; + sha1 = "f6c00c1c0b082246e5c4d99dfb8c7c083b2b582a"; + }; + }; "asn1.js-4.9.1" = { name = "asn1.js"; packageName = "asn1.js"; @@ -3865,15 +3982,6 @@ let sha1 = "16176714c801798e4e8f2cf7f7529467bb4a5771"; }; }; - "is-buffer-1.1.4" = { - name = "is-buffer"; - packageName = "is-buffer"; - version = "1.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/is-buffer/-/is-buffer-1.1.4.tgz"; - sha1 = "cfc86ccd5dc5a52fa80489111c6920c457e2d98b"; - }; - }; "lexical-scope-1.2.0" = { name = "lexical-scope"; packageName = "lexical-scope"; @@ -4684,6 +4792,15 @@ let sha1 = "a9219960a6d5d5d046597aee51252c6655f7177e"; }; }; + "wordwrap-0.0.3" = { + name = "wordwrap"; + packageName = "wordwrap"; + version = "0.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.3.tgz"; + sha1 = "a3d5da6cd5c0bc0008d37234bbaf1bed63059107"; + }; + }; "minimist-0.0.10" = { name = "minimist"; packageName = "minimist"; @@ -5215,22 +5332,22 @@ let sha1 = "89a73ddc5e75c9ef8ab6320c0a1600d6a41179b9"; }; }; - "simple-peer-6.2.2" = { + "simple-peer-6.4.3" = { name = "simple-peer"; packageName = "simple-peer"; - version = "6.2.2"; + version = "6.4.3"; src = fetchurl { - url = "https://registry.npmjs.org/simple-peer/-/simple-peer-6.2.2.tgz"; - sha1 = "9ea1a6e2c2e3656d04eac2a7b612e148f0d370ba"; + url = "https://registry.npmjs.org/simple-peer/-/simple-peer-6.4.3.tgz"; + sha1 = "f487b381e0fe0874bff1020026001bbf4579c20a"; }; }; - "simple-websocket-4.3.0" = { + "simple-websocket-4.3.1" = { name = "simple-websocket"; packageName = "simple-websocket"; - version = "4.3.0"; + version = "4.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/simple-websocket/-/simple-websocket-4.3.0.tgz"; - sha1 = "062990cc94709388c31fc978dfc2a790b1b3e6ea"; + url = "https://registry.npmjs.org/simple-websocket/-/simple-websocket-4.3.1.tgz"; + sha1 = "5d3d5751bb39aeba2f710d8eec78768df821f38d"; }; }; "string2compact-1.2.2" = { @@ -5242,13 +5359,13 @@ let sha1 = "420b3a9ee1c46854919b4a2aeac65c43fa50597b"; }; }; - "ws-1.1.1" = { + "ws-1.1.2" = { name = "ws"; packageName = "ws"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-1.1.1.tgz"; - sha1 = "082ddb6c641e85d4bb451f03d52f06eabdb1f018"; + url = "https://registry.npmjs.org/ws/-/ws-1.1.2.tgz"; + sha1 = "8a244fa052401e08c9886cf44a85189e1fd4067f"; }; }; "ipaddr.js-1.2.0" = { @@ -5269,13 +5386,13 @@ let sha1 = "bbcd40c8451a7ed4ef5c373b8169a409dd1d11d9"; }; }; - "ws-2.0.3" = { + "ws-2.1.0" = { name = "ws"; packageName = "ws"; - version = "2.0.3"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-2.0.3.tgz"; - sha1 = "532fd499c3f7d7d720e543f1f807106cfc57d9cb"; + url = "https://registry.npmjs.org/ws/-/ws-2.1.0.tgz"; + sha1 = "b24eaed9609f8632dd51e3f7698619a90fddcc92"; }; }; "ultron-1.1.0" = { @@ -6493,6 +6610,15 @@ let sha1 = "355219cd6cf18dbe7c01cc7fd2dce765cfdc549a"; }; }; + "abbrev-1.1.0" = { + name = "abbrev"; + packageName = "abbrev"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/abbrev/-/abbrev-1.1.0.tgz"; + sha1 = "d0554c2256636e2f56e7c2e5ad183f859428d81f"; + }; + }; "abbrev-1.0.9" = { name = "abbrev"; packageName = "abbrev"; @@ -6826,6 +6952,15 @@ let sha1 = "e76388d217992c252750241d3d3956fed98d8ff4"; }; }; + "rimraf-2.5.4" = { + name = "rimraf"; + packageName = "rimraf"; + version = "2.5.4"; + src = fetchurl { + url = "https://registry.npmjs.org/rimraf/-/rimraf-2.5.4.tgz"; + sha1 = "96800093cbf1a0c86bd95b4625467535c29dfa04"; + }; + }; "sha-2.0.1" = { name = "sha"; packageName = "sha"; @@ -7645,22 +7780,22 @@ let sha1 = "35c3e177f2078ef789ee4bfafa4373074eaef4fa"; }; }; - "rc-1.1.6" = { + "rc-1.1.7" = { name = "rc"; packageName = "rc"; - version = "1.1.6"; + version = "1.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/rc/-/rc-1.1.6.tgz"; - sha1 = "43651b76b6ae53b5c802f1151fa3fc3b059969c9"; + url = "https://registry.npmjs.org/rc/-/rc-1.1.7.tgz"; + sha1 = "c5ea564bb07aff9fd3a5b32e906c1d3a65940fea"; }; }; - "strip-json-comments-1.0.4" = { + "strip-json-comments-2.0.1" = { name = "strip-json-comments"; packageName = "strip-json-comments"; - version = "1.0.4"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-1.0.4.tgz"; - sha1 = "1e15fbcac97d3ee99bf2d73b4c656b082bbafb91"; + url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-2.0.1.tgz"; + sha1 = "3c531942e908c2697c0ec344858c286c7ca0a60a"; }; }; "clone-2.1.0" = { @@ -9080,22 +9215,22 @@ let sha1 = "c392990c3e684783d838b8c84a45d8a048458361"; }; }; - "globals-9.14.0" = { + "globals-9.16.0" = { name = "globals"; packageName = "globals"; - version = "9.14.0"; + version = "9.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/globals/-/globals-9.14.0.tgz"; - sha1 = "8859936af0038741263053b39d0e76ca241e4034"; + url = "https://registry.npmjs.org/globals/-/globals-9.16.0.tgz"; + sha1 = "63e903658171ec2d9f51b1d31de5e2b8dc01fb80"; }; }; - "ignore-3.2.2" = { + "ignore-3.2.4" = { name = "ignore"; packageName = "ignore"; - version = "3.2.2"; + version = "3.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/ignore/-/ignore-3.2.2.tgz"; - sha1 = "1c51e1ef53bab6ddc15db4d9ac4ec139eceb3410"; + url = "https://registry.npmjs.org/ignore/-/ignore-3.2.4.tgz"; + sha1 = "4055e03596729a8fabe45a43c100ad5ed815c4e8"; }; }; "inquirer-0.12.0" = { @@ -9188,15 +9323,6 @@ let sha1 = "2334c18e9c759f7bdd56fdef7e9ae3d588e68ed3"; }; }; - "strip-json-comments-2.0.1" = { - name = "strip-json-comments"; - packageName = "strip-json-comments"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-2.0.1.tgz"; - sha1 = "3c531942e908c2697c0ec344858c286c7ca0a60a"; - }; - }; "table-3.8.3" = { name = "table"; packageName = "table"; @@ -9773,13 +9899,13 @@ let sha1 = "4ed0ad060df3073300c48440373f72d1cc642d78"; }; }; - "fsevents-1.0.17" = { + "fsevents-1.1.1" = { name = "fsevents"; packageName = "fsevents"; - version = "1.0.17"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/fsevents/-/fsevents-1.0.17.tgz"; - sha1 = "8537f3f12272678765b4fd6528c0f1f66f8f4558"; + url = "https://registry.npmjs.org/fsevents/-/fsevents-1.1.1.tgz"; + sha1 = "f19fd28f43eeaf761680e519a203c4d0b3d31aff"; }; }; "micromatch-2.3.11" = { @@ -9845,15 +9971,6 @@ let sha1 = "ac468177c4943405a092fc8f29760c6ffc6206c0"; }; }; - "kind-of-3.1.0" = { - name = "kind-of"; - packageName = "kind-of"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/kind-of/-/kind-of-3.1.0.tgz"; - sha1 = "475d698a5e49ff5e53d14e3e732429dc8bf4cf47"; - }; - }; "normalize-path-2.0.1" = { name = "normalize-path"; packageName = "normalize-path"; @@ -9962,15 +10079,6 @@ let sha1 = "110dcabff397e9dcff7c0789ccc0a49adf1ec5bb"; }; }; - "repeat-string-1.6.1" = { - name = "repeat-string"; - packageName = "repeat-string"; - version = "1.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/repeat-string/-/repeat-string-1.6.1.tgz"; - sha1 = "8dcae470e1c88abc2d600fff4a776286da75e637"; - }; - }; "is-posix-bracket-0.1.1" = { name = "is-posix-bracket"; packageName = "is-posix-bracket"; @@ -9980,13 +10088,13 @@ let sha1 = "3334dc79774368e92f016e6fbc0a88f5cd6e6bc4"; }; }; - "for-own-0.1.4" = { + "for-own-0.1.5" = { name = "for-own"; packageName = "for-own"; - version = "0.1.4"; + version = "0.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/for-own/-/for-own-0.1.4.tgz"; - sha1 = "0149b41a39088c7515f51ebe1c1386d45f935072"; + url = "https://registry.npmjs.org/for-own/-/for-own-0.1.5.tgz"; + sha1 = "5265c681a4f294dabbf17c9509b6763aa84510ce"; }; }; "is-extendable-0.1.1" = { @@ -9998,13 +10106,13 @@ let sha1 = "62b110e289a471418e3ec36a617d472e301dfc89"; }; }; - "for-in-0.1.6" = { + "for-in-1.0.1" = { name = "for-in"; packageName = "for-in"; - version = "0.1.6"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/for-in/-/for-in-0.1.6.tgz"; - sha1 = "c9f96e89bfad18a545af5ec3ed352a1d9e5b4dc8"; + url = "https://registry.npmjs.org/for-in/-/for-in-1.0.1.tgz"; + sha1 = "d6c3e3798ceaaa301047b109dedf1b1ae37a0efa"; }; }; "glob-base-0.3.0" = { @@ -10260,13 +10368,13 @@ let sha1 = "a4274eeb32fa765da5a7a3b1712617ce3b144149"; }; }; - "coffee-script-1.12.3" = { + "coffee-script-1.12.4" = { name = "coffee-script"; packageName = "coffee-script"; - version = "1.12.3"; + version = "1.12.4"; src = fetchurl { - url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.3.tgz"; - sha1 = "de5f4b1b934a4e9f915c57acd7ad323f68f715db"; + url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.4.tgz"; + sha1 = "fe1bced97fe1fb3927b998f2b45616e0658be1ff"; }; }; "jade-1.11.0" = { @@ -10305,13 +10413,13 @@ let sha1 = "c0dde4ab182713b919b970959a123ecc1a30fcd6"; }; }; - "clean-css-3.4.24" = { + "clean-css-3.4.25" = { name = "clean-css"; packageName = "clean-css"; - version = "3.4.24"; + version = "3.4.25"; src = fetchurl { - url = "https://registry.npmjs.org/clean-css/-/clean-css-3.4.24.tgz"; - sha1 = "89f5a5e9da37ae02394fe049a41388abbe72c3b5"; + url = "https://registry.npmjs.org/clean-css/-/clean-css-3.4.25.tgz"; + sha1 = "9e9a52d5c1e6bc5123e1b2783fa65fe958946ede"; }; }; "commander-2.6.0" = { @@ -10476,85 +10584,13 @@ let sha1 = "b0d042946db2953bb9d292900a6cb5f6d0122031"; }; }; - "yargs-3.10.0" = { - name = "yargs"; - packageName = "yargs"; - version = "3.10.0"; + "optimist-0.3.7" = { + name = "optimist"; + packageName = "optimist"; + version = "0.3.7"; src = fetchurl { - url = "https://registry.npmjs.org/yargs/-/yargs-3.10.0.tgz"; - sha1 = "f7ee7bd857dd7c1d2d38c0e74efbd681d1431fd1"; - }; - }; - "camelcase-1.2.1" = { - name = "camelcase"; - packageName = "camelcase"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/camelcase/-/camelcase-1.2.1.tgz"; - sha1 = "9bb5304d2e0b56698b2c758b08a3eaa9daa58a39"; - }; - }; - "cliui-2.1.0" = { - name = "cliui"; - packageName = "cliui"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cliui/-/cliui-2.1.0.tgz"; - sha1 = "4b475760ff80264c762c3a1719032e91c7fea0d1"; - }; - }; - "window-size-0.1.0" = { - name = "window-size"; - packageName = "window-size"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/window-size/-/window-size-0.1.0.tgz"; - sha1 = "5438cd2ea93b202efa3a19fe8887aee7c94f9c9d"; - }; - }; - "center-align-0.1.3" = { - name = "center-align"; - packageName = "center-align"; - version = "0.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/center-align/-/center-align-0.1.3.tgz"; - sha1 = "aa0d32629b6ee972200411cbd4461c907bc2b7ad"; - }; - }; - "right-align-0.1.3" = { - name = "right-align"; - packageName = "right-align"; - version = "0.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/right-align/-/right-align-0.1.3.tgz"; - sha1 = "61339b722fe6a3515689210d24e14c96148613ef"; - }; - }; - "align-text-0.1.4" = { - name = "align-text"; - packageName = "align-text"; - version = "0.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/align-text/-/align-text-0.1.4.tgz"; - sha1 = "0cd90a561093f35d0a99256c22b7069433fad117"; - }; - }; - "lazy-cache-1.0.4" = { - name = "lazy-cache"; - packageName = "lazy-cache"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/lazy-cache/-/lazy-cache-1.0.4.tgz"; - sha1 = "a1d78fc3a50474cb80845d3b3b6e1da49a446e8e"; - }; - }; - "longest-1.0.1" = { - name = "longest"; - packageName = "longest"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/longest/-/longest-1.0.1.tgz"; - sha1 = "30a0b2da38f73770e8294a0d22e6625ed77d0097"; + url = "https://registry.npmjs.org/optimist/-/optimist-0.3.7.tgz"; + sha1 = "c90941ad59e4273328923074d2cf2e7cbc6ec0d9"; }; }; "acorn-globals-1.0.9" = { @@ -11358,6 +11394,15 @@ let sha1 = "1d09a3bd913c4cadfa81bf18d582bd85bffe0d44"; }; }; + "strip-json-comments-1.0.4" = { + name = "strip-json-comments"; + packageName = "strip-json-comments"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-1.0.4.tgz"; + sha1 = "1e15fbcac97d3ee99bf2d73b4c656b082bbafb91"; + }; + }; "xml-1.0.0" = { name = "xml"; packageName = "xml"; @@ -11583,13 +11628,13 @@ let sha1 = "458c07e09e0d900fc28b70a3fec2dacd1d2cb7f6"; }; }; - "connect-3.5.0" = { + "connect-3.6.0" = { name = "connect"; packageName = "connect"; - version = "3.5.0"; + version = "3.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/connect/-/connect-3.5.0.tgz"; - sha1 = "b357525a0b4c1f50599cd983e1d9efeea9677198"; + url = "https://registry.npmjs.org/connect/-/connect-3.6.0.tgz"; + sha1 = "f09a4f7dcd17324b663b725c815bdb1c4158a46e"; }; }; "core-js-2.4.1" = { @@ -11664,22 +11709,22 @@ let sha1 = "659de9f2cf8dcc27a1481276f205377272382e73"; }; }; - "socket.io-1.7.2" = { + "socket.io-1.7.3" = { name = "socket.io"; packageName = "socket.io"; - version = "1.7.2"; + version = "1.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/socket.io/-/socket.io-1.7.2.tgz"; - sha1 = "83bbbdf2e79263b378900da403e7843e05dc3b71"; + url = "https://registry.npmjs.org/socket.io/-/socket.io-1.7.3.tgz"; + sha1 = "b8af9caba00949e568e369f1327ea9be9ea2461b"; }; }; - "tmp-0.0.28" = { + "tmp-0.0.31" = { name = "tmp"; packageName = "tmp"; - version = "0.0.28"; + version = "0.0.31"; src = fetchurl { - url = "https://registry.npmjs.org/tmp/-/tmp-0.0.28.tgz"; - sha1 = "172735b7f614ea7af39664fa84cf0de4e515d120"; + url = "https://registry.npmjs.org/tmp/-/tmp-0.0.31.tgz"; + sha1 = "8f38ab9438e17315e5dbd8b3657e8bfb277ae4a7"; }; }; "useragent-2.1.12" = { @@ -11709,6 +11754,15 @@ let sha1 = "fe265a218ac6a57cfe854927e9d04c19825eddeb"; }; }; + "qs-6.2.1" = { + name = "qs"; + packageName = "qs"; + version = "6.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/qs/-/qs-6.2.1.tgz"; + sha1 = "ce03c5ff0935bc1d9d69a9f14cbd18e568d67625"; + }; + }; "raw-body-2.2.0" = { name = "raw-body"; packageName = "raw-body"; @@ -11718,13 +11772,13 @@ let sha1 = "994976cf6a5096a41162840492f0bdc5d6e7fb96"; }; }; - "finalhandler-0.5.0" = { + "finalhandler-1.0.0" = { name = "finalhandler"; packageName = "finalhandler"; - version = "0.5.0"; + version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/finalhandler/-/finalhandler-0.5.0.tgz"; - sha1 = "e9508abece9b6dba871a6942a1d7911b91911ac7"; + url = "https://registry.npmjs.org/finalhandler/-/finalhandler-1.0.0.tgz"; + sha1 = "b5691c2c0912092f18ac23e9416bde5cd7dc6755"; }; }; "custom-event-1.0.1" = { @@ -11817,13 +11871,13 @@ let sha1 = "40c453e67e6e13c901ddec317af8986cda9eff8c"; }; }; - "engine.io-1.8.2" = { + "engine.io-1.8.3" = { name = "engine.io"; packageName = "engine.io"; - version = "1.8.2"; + version = "1.8.3"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io/-/engine.io-1.8.2.tgz"; - sha1 = "6b59be730b348c0125b0a4589de1c355abcf7a7e"; + url = "https://registry.npmjs.org/engine.io/-/engine.io-1.8.3.tgz"; + sha1 = "8de7f97895d20d39b85f88eeee777b2bd42b13d4"; }; }; "has-binary-0.1.7" = { @@ -11853,13 +11907,13 @@ let sha1 = "cb6d4bb8bec81e1078b99677f9ced0046066bb8b"; }; }; - "socket.io-client-1.7.2" = { + "socket.io-client-1.7.3" = { name = "socket.io-client"; packageName = "socket.io-client"; - version = "1.7.2"; + version = "1.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/socket.io-client/-/socket.io-client-1.7.2.tgz"; - sha1 = "39fdb0c3dd450e321b7e40cfd83612ec533dd644"; + url = "https://registry.npmjs.org/socket.io-client/-/socket.io-client-1.7.3.tgz"; + sha1 = "b30e86aa10d5ef3546601c09cde4765e381da377"; }; }; "socket.io-parser-2.3.1" = { @@ -11961,13 +12015,13 @@ let sha1 = "137918d6d78283f7df7a6b7c5a63e140e69425e6"; }; }; - "engine.io-client-1.8.2" = { + "engine.io-client-1.8.3" = { name = "engine.io-client"; packageName = "engine.io-client"; - version = "1.8.2"; + version = "1.8.3"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-1.8.2.tgz"; - sha1 = "c38767547f2a7d184f5752f6f0ad501006703766"; + url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-1.8.3.tgz"; + sha1 = "1798ed93451246453d4c6f635d7a201fe940d5ab"; }; }; "object-component-0.0.3" = { @@ -12753,13 +12807,13 @@ let sha1 = "51af7d614ad9a9f610ea1bafbb989d6b1c56890f"; }; }; - "convert-source-map-1.3.0" = { + "convert-source-map-1.4.0" = { name = "convert-source-map"; packageName = "convert-source-map"; - version = "1.3.0"; + version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.3.0.tgz"; - sha1 = "e9f3e9c6e2728efc2676696a70eb382f73106a67"; + url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.4.0.tgz"; + sha1 = "e3dad195bf61bfe13a7a3c73e9876ec14a0268f3"; }; }; "express-2.5.11" = { @@ -13113,6 +13167,15 @@ let sha1 = "159a49b9a9714c1fb102f2e0ed1906fab6a450f4"; }; }; + "serve-favicon-2.4.0" = { + name = "serve-favicon"; + packageName = "serve-favicon"; + version = "2.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/serve-favicon/-/serve-favicon-2.4.0.tgz"; + sha1 = "064dcdfdb0f250ae3b148eb18c8bbf3d185e3dd0"; + }; + }; "strong-data-uri-1.0.4" = { name = "strong-data-uri"; packageName = "strong-data-uri"; @@ -13221,6 +13284,24 @@ let sha1 = "17eb2807987f76952e9c0485fc311d06a826a2e0"; }; }; + "etag-1.8.0" = { + name = "etag"; + packageName = "etag"; + version = "1.8.0"; + src = fetchurl { + url = "https://registry.npmjs.org/etag/-/etag-1.8.0.tgz"; + sha1 = "6f631aef336d6c46362b51764044ce216be3c051"; + }; + }; + "fresh-0.4.0" = { + name = "fresh"; + packageName = "fresh"; + version = "0.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/fresh/-/fresh-0.4.0.tgz"; + sha1 = "475626a934a8d3480b2101a1d6ecef7dafd7c553"; + }; + }; "truncate-1.0.5" = { name = "truncate"; packageName = "truncate"; @@ -13563,6 +13644,15 @@ let sha1 = "aba03fc3bb736d6c88b091d013d8a8e590d84718"; }; }; + "ws-1.1.1" = { + name = "ws"; + packageName = "ws"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/ws/-/ws-1.1.1.tgz"; + sha1 = "082ddb6c641e85d4bb451f03d52f06eabdb1f018"; + }; + }; "node-red-node-feedparser-0.1.7" = { name = "node-red-node-feedparser"; packageName = "node-red-node-feedparser"; @@ -13572,13 +13662,13 @@ let sha1 = "b0bf8a079d67732bcce019eaf8da1d7936658a7f"; }; }; - "node-red-node-email-0.1.16" = { + "node-red-node-email-0.1.21" = { name = "node-red-node-email"; packageName = "node-red-node-email"; - version = "0.1.16"; + version = "0.1.21"; src = fetchurl { - url = "https://registry.npmjs.org/node-red-node-email/-/node-red-node-email-0.1.16.tgz"; - sha1 = "ede78397c857d28e6785f2f1425e7d89d3b1ed38"; + url = "https://registry.npmjs.org/node-red-node-email/-/node-red-node-email-0.1.21.tgz"; + sha1 = "63baed16d538e786ddadc169b23552d9eb9abc30"; }; }; "node-red-node-twitter-0.1.9" = { @@ -13770,6 +13860,15 @@ let sha1 = "87476c6a67c8daa87e32e87616df883ba7fb071b"; }; }; + "finalhandler-0.5.0" = { + name = "finalhandler"; + packageName = "finalhandler"; + version = "0.5.0"; + src = fetchurl { + url = "https://registry.npmjs.org/finalhandler/-/finalhandler-0.5.0.tgz"; + sha1 = "e9508abece9b6dba871a6942a1d7911b91911ac7"; + }; + }; "send-0.14.1" = { name = "send"; packageName = "send"; @@ -13788,13 +13887,13 @@ let sha1 = "fdc90eed943fde11b893554b8cc63d0e899ba918"; }; }; - "cookies-0.6.2" = { + "cookies-0.7.0" = { name = "cookies"; packageName = "cookies"; - version = "0.6.2"; + version = "0.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/cookies/-/cookies-0.6.2.tgz"; - sha1 = "6ac1b052895208e8fc4c4f5f86a9ed31b9cb5ccf"; + url = "https://registry.npmjs.org/cookies/-/cookies-0.7.0.tgz"; + sha1 = "0bc961d910c35254980fc7c9eff5da12011bbf00"; }; }; "i18next-client-1.10.3" = { @@ -14733,15 +14832,6 @@ let sha1 = "8cdd8fbac4e2d2ea1e7e2e8097c42f442280f85b"; }; }; - "aproba-1.0.4" = { - name = "aproba"; - packageName = "aproba"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/aproba/-/aproba-1.0.4.tgz"; - sha1 = "2713680775e7614c8ba186c065d4e2e52d1072c0"; - }; - }; "fstream-npm-1.2.0" = { name = "fstream-npm"; packageName = "fstream-npm"; @@ -14751,6 +14841,15 @@ let sha1 = "d2c3c89101346982d64e57091c38487bda916fce"; }; }; + "lazy-property-1.0.0" = { + name = "lazy-property"; + packageName = "lazy-property"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/lazy-property/-/lazy-property-1.0.0.tgz"; + sha1 = "84ddc4b370679ba8bd4cdcfa4c06b43d57111147"; + }; + }; "lodash._baseuniq-4.6.0" = { name = "lodash._baseuniq"; packageName = "lodash._baseuniq"; @@ -14841,13 +14940,13 @@ let sha1 = "1ef61851bb7231db53e397aaf76ddf1cb645c3df"; }; }; - "opener-1.4.2" = { + "opener-1.4.3" = { name = "opener"; packageName = "opener"; - version = "1.4.2"; + version = "1.4.3"; src = fetchurl { - url = "https://registry.npmjs.org/opener/-/opener-1.4.2.tgz"; - sha1 = "b32582080042af8680c389a499175b4c54fff523"; + url = "https://registry.npmjs.org/opener/-/opener-1.4.3.tgz"; + sha1 = "5c6da2c5d7e5831e8ffa3964950f8d6674ac90b8"; }; }; "read-cmd-shim-1.0.1" = { @@ -15255,6 +15354,15 @@ let sha1 = "8f92c515482bd6831b7c93013e70f87552c7cf5a"; }; }; + "aproba-1.0.4" = { + name = "aproba"; + packageName = "aproba"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/aproba/-/aproba-1.0.4.tgz"; + sha1 = "2713680775e7614c8ba186c065d4e2e52d1072c0"; + }; + }; "request-2.75.0" = { name = "request"; packageName = "request"; @@ -15519,13 +15627,13 @@ let sha1 = "78717d9b718ce7cab55e20b9f24388d5fa51d5c0"; }; }; - "service-runner-2.1.15" = { + "service-runner-2.2.4" = { name = "service-runner"; packageName = "service-runner"; - version = "2.1.15"; + version = "2.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/service-runner/-/service-runner-2.1.15.tgz"; - sha1 = "8b3d05729def7a0ce211e0483d9d907f13febbfb"; + url = "https://registry.npmjs.org/service-runner/-/service-runner-2.2.4.tgz"; + sha1 = "75cc51113d31d4bb287130880b38f82d7bb4c42c"; }; }; "simplediff-0.1.1" = { @@ -15645,13 +15753,13 @@ let sha1 = "58a6c1ff717f25673be4d2f736d1c94d5d79e239"; }; }; - "limitation-0.1.9" = { + "limitation-0.2.0" = { name = "limitation"; packageName = "limitation"; - version = "0.1.9"; + version = "0.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/limitation/-/limitation-0.1.9.tgz"; - sha1 = "ba055ff7dd3a267a65cc6be2deca4ea6bebbdb03"; + url = "https://registry.npmjs.org/limitation/-/limitation-0.2.0.tgz"; + sha1 = "70ce102a972a0b79d4ca13a3ab62b8e6fe682a62"; }; }; "yargs-6.6.0" = { @@ -15663,6 +15771,15 @@ let sha1 = "782ec21ef403345f830a808ca3d513af56065208"; }; }; + "dnscache-1.0.1" = { + name = "dnscache"; + packageName = "dnscache"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/dnscache/-/dnscache-1.0.1.tgz"; + sha1 = "42cb2b9bfb5e8fbdfa395aac74e127fc05074d31"; + }; + }; "dtrace-provider-0.8.0" = { name = "dtrace-provider"; packageName = "dtrace-provider"; @@ -15844,6 +15961,24 @@ let sha1 = "29cceac0dc4f03c6c87b4a9f217dd18c9f74871c"; }; }; + "lodash.clone-4.3.2" = { + name = "lodash.clone"; + packageName = "lodash.clone"; + version = "4.3.2"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash.clone/-/lodash.clone-4.3.2.tgz"; + sha1 = "e56b176b6823a7dde38f7f2bf58de7d5971200e9"; + }; + }; + "lodash._baseclone-4.5.7" = { + name = "lodash._baseclone"; + packageName = "lodash._baseclone"; + version = "4.5.7"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash._baseclone/-/lodash._baseclone-4.5.7.tgz"; + sha1 = "ce42ade08384ef5d62fa77c30f61a46e686f8434"; + }; + }; "lodash.assign-4.2.0" = { name = "lodash.assign"; packageName = "lodash.assign"; @@ -16807,13 +16942,13 @@ let sha1 = "68ce5e8a1ef0a23bb570cc28537b5332aba63ef1"; }; }; - "recast-0.11.21" = { + "recast-0.11.22" = { name = "recast"; packageName = "recast"; - version = "0.11.21"; + version = "0.11.22"; src = fetchurl { - url = "https://registry.npmjs.org/recast/-/recast-0.11.21.tgz"; - sha1 = "4e83081c6359ecb2e526d14f4138879333f20ac9"; + url = "https://registry.npmjs.org/recast/-/recast-0.11.22.tgz"; + sha1 = "dedeb18fb001a2bbc6ac34475fda53dfe3d47dfa"; }; }; "ast-types-0.9.5" = { @@ -17177,6 +17312,15 @@ let sha1 = "2af824ae20eccb8f902325b1a2c27dd6619805c9"; }; }; + "http-errors-1.6.1" = { + name = "http-errors"; + packageName = "http-errors"; + version = "1.6.1"; + src = fetchurl { + url = "https://registry.npmjs.org/http-errors/-/http-errors-1.6.1.tgz"; + sha1 = "5f8b8ed98aca545656bf572997387f904a722257"; + }; + }; "fs-ext-0.5.0" = { name = "fs-ext"; packageName = "fs-ext"; @@ -17294,6 +17438,15 @@ let sha1 = "1e0f4650c862dcbfed54fd42b148e9bb1721fcf2"; }; }; + "setprototypeof-1.0.3" = { + name = "setprototypeof"; + packageName = "setprototypeof"; + version = "1.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/setprototypeof/-/setprototypeof-1.0.3.tgz"; + sha1 = "66567e37043eeb4f04d91bd658c0cbefb55b8e04"; + }; + }; "lru-cache-2.2.0" = { name = "lru-cache"; packageName = "lru-cache"; @@ -17681,6 +17834,15 @@ let sha1 = "316545bf22229225a2cecaa6824cd2f56a9709ed"; }; }; + "acorn-4.0.11" = { + name = "acorn"; + packageName = "acorn"; + version = "4.0.11"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn/-/acorn-4.0.11.tgz"; + sha1 = "edcda3bd937e7556410d42ed5860f67399c794c0"; + }; + }; "enhanced-resolve-2.3.0" = { name = "enhanced-resolve"; packageName = "enhanced-resolve"; @@ -17870,15 +18032,6 @@ let sha1 = "7a31c97f7869246d76c5cf2f5c977a1c4c8e5ab5"; }; }; - "uglify-js-2.6.1" = { - name = "uglify-js"; - packageName = "uglify-js"; - version = "2.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.6.1.tgz"; - sha1 = "edbbe1888ba3525ded3a7bf836b30b3405d3161b"; - }; - }; "xmldom-0.1.22" = { name = "xmldom"; packageName = "xmldom"; @@ -17888,13 +18041,13 @@ let sha1 = "10de4e5e964981f03c8cc72fadc08d14b6c3aa26"; }; }; - "qs-6.0.2" = { + "qs-6.0.3" = { name = "qs"; packageName = "qs"; - version = "6.0.2"; + version = "6.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.0.2.tgz"; - sha1 = "88c68d590e8ed56c76c79f352c17b982466abfcd"; + url = "https://registry.npmjs.org/qs/-/qs-6.0.3.tgz"; + sha1 = "95f870b23e70268fba18704e80667515905af06c"; }; }; "blueimp-md5-2.6.0" = { @@ -17987,6 +18140,15 @@ let sha1 = "8bd057bde8f7d0a02b93dda433c2a8d942d8a9a0"; }; }; + "node-cache-4.1.1" = { + name = "node-cache"; + packageName = "node-cache"; + version = "4.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/node-cache/-/node-cache-4.1.1.tgz"; + sha1 = "08524645ee4039dedc3dcc1dd7c6b979e0619e44"; + }; + }; "npm-4.1.2" = { name = "npm"; packageName = "npm"; @@ -18059,13 +18221,13 @@ let sha1 = "1accf97dd739b983bf994d56fec8f95853641b7a"; }; }; - "color-string-1.4.0" = { + "color-string-1.5.0" = { name = "color-string"; packageName = "color-string"; - version = "1.4.0"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/color-string/-/color-string-1.4.0.tgz"; - sha1 = "2b47f8565fb0eb52f9f77c801992b8ca55d6e898"; + url = "https://registry.npmjs.org/color-string/-/color-string-1.5.0.tgz"; + sha1 = "f9a7a0553e55b34d18a463c06f13e3384dd960ce"; }; }; "color-name-1.1.1" = { @@ -18320,15 +18482,6 @@ let sha1 = "4424aca20e14d255c0b0889af6f6b8973da10e0d"; }; }; - "tmp-0.0.31" = { - name = "tmp"; - packageName = "tmp"; - version = "0.0.31"; - src = fetchurl { - url = "https://registry.npmjs.org/tmp/-/tmp-0.0.31.tgz"; - sha1 = "8f38ab9438e17315e5dbd8b3657e8bfb277ae4a7"; - }; - }; "follow-redirects-0.0.3" = { name = "follow-redirects"; packageName = "follow-redirects"; @@ -18338,15 +18491,6 @@ let sha1 = "6ce67a24db1fe13f226c1171a72a7ef2b17b8f65"; }; }; - "acorn-4.0.11" = { - name = "acorn"; - packageName = "acorn"; - version = "4.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/acorn/-/acorn-4.0.11.tgz"; - sha1 = "edcda3bd937e7556410d42ed5860f67399c794c0"; - }; - }; "acorn-dynamic-import-2.0.1" = { name = "acorn-dynamic-import"; packageName = "acorn-dynamic-import"; @@ -18383,13 +18527,13 @@ let sha1 = "f482aea82d543e07921700d5a46ef26fdac6b8a2"; }; }; - "loader-utils-0.2.16" = { + "loader-utils-0.2.17" = { name = "loader-utils"; packageName = "loader-utils"; - version = "0.2.16"; + version = "0.2.17"; src = fetchurl { - url = "https://registry.npmjs.org/loader-utils/-/loader-utils-0.2.16.tgz"; - sha1 = "f08632066ed8282835dff88dfb52704765adee6d"; + url = "https://registry.npmjs.org/loader-utils/-/loader-utils-0.2.17.tgz"; + sha1 = "f86e6374d43205a6e6c60e9196f17c0299bfb348"; }; }; "memory-fs-0.4.1" = { @@ -18410,13 +18554,13 @@ let sha1 = "a3a59ec97024985b46e958379646f96c4b616646"; }; }; - "watchpack-1.2.0" = { + "watchpack-1.3.1" = { name = "watchpack"; packageName = "watchpack"; - version = "1.2.0"; + version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/watchpack/-/watchpack-1.2.0.tgz"; - sha1 = "15d4620f1e7471f13fcb551d5c030d2c3eb42dbb"; + url = "https://registry.npmjs.org/watchpack/-/watchpack-1.3.1.tgz"; + sha1 = "7d8693907b28ce6013e7f3610aa2a1acf07dad87"; }; }; "webpack-sources-0.1.4" = { @@ -18491,13 +18635,13 @@ let sha1 = "c550b2ab5427f6b3f21f5afead88c4f5587b2106"; }; }; - "babel-runtime-6.22.0" = { + "babel-runtime-6.23.0" = { name = "babel-runtime"; packageName = "babel-runtime"; - version = "6.22.0"; + version = "6.23.0"; src = fetchurl { - url = "https://registry.npmjs.org/babel-runtime/-/babel-runtime-6.22.0.tgz"; - sha1 = "1cf8b4ac67c77a4ddb0db2ae1f74de52ac4ca611"; + url = "https://registry.npmjs.org/babel-runtime/-/babel-runtime-6.23.0.tgz"; + sha1 = "0a9489f144de70efb3ce4300accdb329e2fc543b"; }; }; "death-1.1.0" = { @@ -18509,13 +18653,13 @@ let sha1 = "01aa9c401edd92750514470b8266390c66c67318"; }; }; - "detect-indent-4.0.0" = { + "detect-indent-5.0.0" = { name = "detect-indent"; packageName = "detect-indent"; - version = "4.0.0"; + version = "5.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/detect-indent/-/detect-indent-4.0.0.tgz"; - sha1 = "f76d064352cdf43a1cb6ce619c4ee3a9475de208"; + url = "https://registry.npmjs.org/detect-indent/-/detect-indent-5.0.0.tgz"; + sha1 = "3871cc0a6a002e8c3e5b3cf7f336264675f06b9d"; }; }; "diff-2.2.3" = { @@ -18527,6 +18671,15 @@ let sha1 = "60eafd0d28ee906e4e8ff0a52c1229521033bf99"; }; }; + "inquirer-3.0.5" = { + name = "inquirer"; + packageName = "inquirer"; + version = "3.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/inquirer/-/inquirer-3.0.5.tgz"; + sha1 = "172cabc8eacbfb91d595f5d7c354b446b8141f65"; + }; + }; "invariant-2.2.2" = { name = "invariant"; packageName = "invariant"; @@ -18545,13 +18698,13 @@ let sha1 = "f739336b2632365061a9d48270cd56ae3369318e"; }; }; - "leven-2.0.0" = { + "leven-2.1.0" = { name = "leven"; packageName = "leven"; - version = "2.0.0"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/leven/-/leven-2.0.0.tgz"; - sha1 = "74c45744439550da185801912829f61d22071bc1"; + url = "https://registry.npmjs.org/leven/-/leven-2.1.0.tgz"; + sha1 = "c2e7a9f772094dee9d34202ae8acce4687875580"; }; }; "node-emoji-1.5.1" = { @@ -18563,13 +18716,13 @@ let sha1 = "fd918e412769bf8c448051238233840b2aff16a1"; }; }; - "object-path-0.11.3" = { + "object-path-0.11.4" = { name = "object-path"; packageName = "object-path"; - version = "0.11.3"; + version = "0.11.4"; src = fetchurl { - url = "https://registry.npmjs.org/object-path/-/object-path-0.11.3.tgz"; - sha1 = "3e21a42ad07234d815429ae9e15c1c5f38050554"; + url = "https://registry.npmjs.org/object-path/-/object-path-0.11.4.tgz"; + sha1 = "370ae752fbf37de3ea70a861c23bba8915691949"; }; }; "proper-lockfile-2.0.0" = { @@ -18599,13 +18752,58 @@ let sha1 = "1180a30d64e1970d8f55dd8cb0da8ffccecad71e"; }; }; - "regenerator-runtime-0.10.1" = { + "regenerator-runtime-0.10.3" = { name = "regenerator-runtime"; packageName = "regenerator-runtime"; - version = "0.10.1"; + version = "0.10.3"; src = fetchurl { - url = "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.10.1.tgz"; - sha1 = "257f41961ce44558b18f7814af48c17559f9faeb"; + url = "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.10.3.tgz"; + sha1 = "8c4367a904b51ea62a908ac310bf99ff90a82a3e"; + }; + }; + "cli-cursor-2.1.0" = { + name = "cli-cursor"; + packageName = "cli-cursor"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/cli-cursor/-/cli-cursor-2.1.0.tgz"; + sha1 = "b35dac376479facc3e94747d41d0d0f5238ffcb5"; + }; + }; + "external-editor-2.0.1" = { + name = "external-editor"; + packageName = "external-editor"; + version = "2.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/external-editor/-/external-editor-2.0.1.tgz"; + sha1 = "4c597c6c88fa6410e41dbbaa7b1be2336aa31095"; + }; + }; + "figures-2.0.0" = { + name = "figures"; + packageName = "figures"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/figures/-/figures-2.0.0.tgz"; + sha1 = "3ab1a2d2a62c8bfb431a0c94cb797a2fce27c962"; + }; + }; + "restore-cursor-2.0.0" = { + name = "restore-cursor"; + packageName = "restore-cursor"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/restore-cursor/-/restore-cursor-2.0.0.tgz"; + sha1 = "9f7ee287f82fd326d4fd162923d62129eee0dfaf"; + }; + }; + "onetime-2.0.0" = { + name = "onetime"; + packageName = "onetime"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/onetime/-/onetime-2.0.0.tgz"; + sha1 = "52aa8110e52fc5126ffc667bd8ec21c2ed209ce6"; }; }; "loose-envify-1.3.1" = { @@ -18635,16 +18833,439 @@ let sha1 = "6b26e9bd3afcaa7be3b4269b526de1b82000ac78"; }; }; + "cli-list-0.1.8" = { + name = "cli-list"; + packageName = "cli-list"; + version = "0.1.8"; + src = fetchurl { + url = "https://registry.npmjs.org/cli-list/-/cli-list-0.1.8.tgz"; + sha1 = "aee6d45c4c59bf80068bb968089fb06f1aeddc0a"; + }; + }; + "cross-spawn-3.0.1" = { + name = "cross-spawn"; + packageName = "cross-spawn"; + version = "3.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/cross-spawn/-/cross-spawn-3.0.1.tgz"; + sha1 = "1256037ecb9f0c5f79e3d6ef135e30770184b982"; + }; + }; + "fullname-2.1.0" = { + name = "fullname"; + packageName = "fullname"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/fullname/-/fullname-2.1.0.tgz"; + sha1 = "c46bf0f7c3f24fd5b3358d00e4a41380eef87350"; + }; + }; + "humanize-string-1.0.1" = { + name = "humanize-string"; + packageName = "humanize-string"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/humanize-string/-/humanize-string-1.0.1.tgz"; + sha1 = "fce2d6c545efc25dea1f23235182c98da0180b42"; + }; + }; + "inquirer-0.11.4" = { + name = "inquirer"; + packageName = "inquirer"; + version = "0.11.4"; + src = fetchurl { + url = "https://registry.npmjs.org/inquirer/-/inquirer-0.11.4.tgz"; + sha1 = "81e3374e8361beaff2d97016206d359d0b32fa4d"; + }; + }; + "insight-0.7.0" = { + name = "insight"; + packageName = "insight"; + version = "0.7.0"; + src = fetchurl { + url = "https://registry.npmjs.org/insight/-/insight-0.7.0.tgz"; + sha1 = "061f9189835bd38a97a60c2b76ea0c6b30099ff6"; + }; + }; + "npm-keyword-4.2.0" = { + name = "npm-keyword"; + packageName = "npm-keyword"; + version = "4.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/npm-keyword/-/npm-keyword-4.2.0.tgz"; + sha1 = "98ffebfdbb1336f27ef5fe1baca0dcacd0acf6c0"; + }; + }; + "opn-3.0.3" = { + name = "opn"; + packageName = "opn"; + version = "3.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/opn/-/opn-3.0.3.tgz"; + sha1 = "b6d99e7399f78d65c3baaffef1fb288e9b85243a"; + }; + }; + "parse-help-0.1.1" = { + name = "parse-help"; + packageName = "parse-help"; + version = "0.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/parse-help/-/parse-help-0.1.1.tgz"; + sha1 = "2f4df942e77a5581bba9967c0c3f48e4c66d7dda"; + }; + }; + "root-check-1.0.0" = { + name = "root-check"; + packageName = "root-check"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/root-check/-/root-check-1.0.0.tgz"; + sha1 = "c52a794bf0db9fad567536e41898f0c9e0a86697"; + }; + }; + "sort-on-1.3.0" = { + name = "sort-on"; + packageName = "sort-on"; + version = "1.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sort-on/-/sort-on-1.3.0.tgz"; + sha1 = "0dfd5b364b23df7f2acd86985daeb889e1a7c840"; + }; + }; + "tabtab-1.3.2" = { + name = "tabtab"; + packageName = "tabtab"; + version = "1.3.2"; + src = fetchurl { + url = "https://registry.npmjs.org/tabtab/-/tabtab-1.3.2.tgz"; + sha1 = "bb9c2ca6324f659fde7634c2caf3c096e1187ca7"; + }; + }; + "titleize-1.0.0" = { + name = "titleize"; + packageName = "titleize"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/titleize/-/titleize-1.0.0.tgz"; + sha1 = "7d350722061830ba6617631e0cfd3ea08398d95a"; + }; + }; + "update-notifier-0.6.3" = { + name = "update-notifier"; + packageName = "update-notifier"; + version = "0.6.3"; + src = fetchurl { + url = "https://registry.npmjs.org/update-notifier/-/update-notifier-0.6.3.tgz"; + sha1 = "776dec8daa13e962a341e8a1d98354306b67ae08"; + }; + }; + "yeoman-character-1.1.0" = { + name = "yeoman-character"; + packageName = "yeoman-character"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-character/-/yeoman-character-1.1.0.tgz"; + sha1 = "90d4b5beaf92759086177015b2fdfa2e0684d7c7"; + }; + }; + "yeoman-doctor-2.1.0" = { + name = "yeoman-doctor"; + packageName = "yeoman-doctor"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-doctor/-/yeoman-doctor-2.1.0.tgz"; + sha1 = "94ab784896a64f53a9fac452d5e9133e2750a236"; + }; + }; + "yeoman-environment-1.6.6" = { + name = "yeoman-environment"; + packageName = "yeoman-environment"; + version = "1.6.6"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-environment/-/yeoman-environment-1.6.6.tgz"; + sha1 = "cd85fa67d156060e440d7807d7ef7cf0d2d1d671"; + }; + }; + "yosay-1.2.1" = { + name = "yosay"; + packageName = "yosay"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/yosay/-/yosay-1.2.1.tgz"; + sha1 = "9466ef969830e85b474e267b50f7688693ed3b5b"; + }; + }; + "npmconf-2.1.2" = { + name = "npmconf"; + packageName = "npmconf"; + version = "2.1.2"; + src = fetchurl { + url = "https://registry.npmjs.org/npmconf/-/npmconf-2.1.2.tgz"; + sha1 = "66606a4a736f1e77a059aa071a79c94ab781853a"; + }; + }; + "execall-1.0.0" = { + name = "execall"; + packageName = "execall"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/execall/-/execall-1.0.0.tgz"; + sha1 = "73d0904e395b3cab0658b08d09ec25307f29bb73"; + }; + }; + "clone-regexp-1.0.0" = { + name = "clone-regexp"; + packageName = "clone-regexp"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/clone-regexp/-/clone-regexp-1.0.0.tgz"; + sha1 = "eae0a2413f55c0942f818c229fefce845d7f3b1c"; + }; + }; + "is-regexp-1.0.0" = { + name = "is-regexp"; + packageName = "is-regexp"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-regexp/-/is-regexp-1.0.0.tgz"; + sha1 = "fd2d883545c46bac5a633e7b9a09e87fa2cb5069"; + }; + }; + "is-supported-regexp-flag-1.0.0" = { + name = "is-supported-regexp-flag"; + packageName = "is-supported-regexp-flag"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-supported-regexp-flag/-/is-supported-regexp-flag-1.0.0.tgz"; + sha1 = "8b520c85fae7a253382d4b02652e045576e13bb8"; + }; + }; + "downgrade-root-1.2.2" = { + name = "downgrade-root"; + packageName = "downgrade-root"; + version = "1.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/downgrade-root/-/downgrade-root-1.2.2.tgz"; + sha1 = "531319715b0e81ffcc22eb28478ba27643e12c6c"; + }; + }; + "sudo-block-1.2.0" = { + name = "sudo-block"; + packageName = "sudo-block"; + version = "1.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sudo-block/-/sudo-block-1.2.0.tgz"; + sha1 = "cc539bf8191624d4f507d83eeb45b4cea27f3463"; + }; + }; + "default-uid-1.0.0" = { + name = "default-uid"; + packageName = "default-uid"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/default-uid/-/default-uid-1.0.0.tgz"; + sha1 = "fcefa9df9f5ac40c8916d912dd1fe1146aa3c59e"; + }; + }; + "is-root-1.0.0" = { + name = "is-root"; + packageName = "is-root"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-root/-/is-root-1.0.0.tgz"; + sha1 = "07b6c233bc394cd9d02ba15c966bd6660d6342d5"; + }; + }; + "is-docker-1.1.0" = { + name = "is-docker"; + packageName = "is-docker"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-docker/-/is-docker-1.1.0.tgz"; + sha1 = "f04374d4eee5310e9a8e113bf1495411e46176a1"; + }; + }; + "dot-prop-2.4.0" = { + name = "dot-prop"; + packageName = "dot-prop"; + version = "2.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/dot-prop/-/dot-prop-2.4.0.tgz"; + sha1 = "848e28f7f1d50740c6747ab3cb07670462b6f89c"; + }; + }; + "boxen-0.3.1" = { + name = "boxen"; + packageName = "boxen"; + version = "0.3.1"; + src = fetchurl { + url = "https://registry.npmjs.org/boxen/-/boxen-0.3.1.tgz"; + sha1 = "a7d898243ae622f7abb6bb604d740a76c6a5461b"; + }; + }; + "bin-version-check-2.1.0" = { + name = "bin-version-check"; + packageName = "bin-version-check"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/bin-version-check/-/bin-version-check-2.1.0.tgz"; + sha1 = "e4e5df290b9069f7d111324031efc13fdd11a5b0"; + }; + }; + "each-async-1.1.1" = { + name = "each-async"; + packageName = "each-async"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/each-async/-/each-async-1.1.1.tgz"; + sha1 = "dee5229bdf0ab6ba2012a395e1b869abf8813473"; + }; + }; + "log-symbols-1.0.2" = { + name = "log-symbols"; + packageName = "log-symbols"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/log-symbols/-/log-symbols-1.0.2.tgz"; + sha1 = "376ff7b58ea3086a0f09facc74617eca501e1a18"; + }; + }; + "object-values-1.0.0" = { + name = "object-values"; + packageName = "object-values"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/object-values/-/object-values-1.0.0.tgz"; + sha1 = "72af839630119e5b98c3b02bb8c27e3237158105"; + }; + }; + "twig-0.8.9" = { + name = "twig"; + packageName = "twig"; + version = "0.8.9"; + src = fetchurl { + url = "https://registry.npmjs.org/twig/-/twig-0.8.9.tgz"; + sha1 = "b1594f002b684e5f029de3e54e87bec4f084b6c2"; + }; + }; + "bin-version-1.0.4" = { + name = "bin-version"; + packageName = "bin-version"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/bin-version/-/bin-version-1.0.4.tgz"; + sha1 = "9eb498ee6fd76f7ab9a7c160436f89579435d78e"; + }; + }; + "semver-truncate-1.1.2" = { + name = "semver-truncate"; + packageName = "semver-truncate"; + version = "1.1.2"; + src = fetchurl { + url = "https://registry.npmjs.org/semver-truncate/-/semver-truncate-1.1.2.tgz"; + sha1 = "57f41de69707a62709a7e0104ba2117109ea47e8"; + }; + }; + "find-versions-1.2.1" = { + name = "find-versions"; + packageName = "find-versions"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/find-versions/-/find-versions-1.2.1.tgz"; + sha1 = "cbde9f12e38575a0af1be1b9a2c5d5fd8f186b62"; + }; + }; + "semver-regex-1.0.0" = { + name = "semver-regex"; + packageName = "semver-regex"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/semver-regex/-/semver-regex-1.0.0.tgz"; + sha1 = "92a4969065f9c70c694753d55248fc68f8f652c9"; + }; + }; + "globby-4.1.0" = { + name = "globby"; + packageName = "globby"; + version = "4.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/globby/-/globby-4.1.0.tgz"; + sha1 = "080f54549ec1b82a6c60e631fc82e1211dbe95f8"; + }; + }; + "grouped-queue-0.3.3" = { + name = "grouped-queue"; + packageName = "grouped-queue"; + version = "0.3.3"; + src = fetchurl { + url = "https://registry.npmjs.org/grouped-queue/-/grouped-queue-0.3.3.tgz"; + sha1 = "c167d2a5319c5a0e0964ef6a25b7c2df8996c85c"; + }; + }; + "mem-fs-1.1.3" = { + name = "mem-fs"; + packageName = "mem-fs"; + version = "1.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/mem-fs/-/mem-fs-1.1.3.tgz"; + sha1 = "b8ae8d2e3fcb6f5d3f9165c12d4551a065d989cc"; + }; + }; + "vinyl-file-2.0.0" = { + name = "vinyl-file"; + packageName = "vinyl-file"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/vinyl-file/-/vinyl-file-2.0.0.tgz"; + sha1 = "a7ebf5ffbefda1b7d18d140fcb07b223efb6751a"; + }; + }; + "strip-bom-stream-2.0.0" = { + name = "strip-bom-stream"; + packageName = "strip-bom-stream"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/strip-bom-stream/-/strip-bom-stream-2.0.0.tgz"; + sha1 = "f87db5ef2613f6968aa545abfe1ec728b6a829ca"; + }; + }; + "first-chunk-stream-2.0.0" = { + name = "first-chunk-stream"; + packageName = "first-chunk-stream"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/first-chunk-stream/-/first-chunk-stream-2.0.0.tgz"; + sha1 = "1bdecdb8e083c0664b91945581577a43a9f31d70"; + }; + }; + "pad-component-0.0.1" = { + name = "pad-component"; + packageName = "pad-component"; + version = "0.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/pad-component/-/pad-component-0.0.1.tgz"; + sha1 = "ad1f22ce1bf0fdc0d6ddd908af17f351a404b8ac"; + }; + }; + "taketalk-1.0.0" = { + name = "taketalk"; + packageName = "taketalk"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/taketalk/-/taketalk-1.0.0.tgz"; + sha1 = "b4d4f0deed206ae7df775b129ea2ca6de52f26dd"; + }; + }; }; in { alloy = nodeEnv.buildNodePackage { name = "alloy"; packageName = "alloy"; - version = "1.9.6"; + version = "1.9.8"; src = fetchurl { - url = "https://registry.npmjs.org/alloy/-/alloy-1.9.6.tgz"; - sha1 = "550505b1a9133189e98276952ad845b8cbcfdc9e"; + url = "https://registry.npmjs.org/alloy/-/alloy-1.9.8.tgz"; + sha1 = "17294e9828a1f11ef241d59f5eb040e6a5b4ed13"; }; dependencies = [ sources."colors-0.6.0-1" @@ -18670,23 +19291,61 @@ in sources."JSV-4.0.2" ]; }) - (sources."uglify-js-2.4.15" // { + (sources."uglify-js-2.6.1" // { dependencies = [ sources."async-0.2.10" - (sources."source-map-0.1.34" // { - dependencies = [ - sources."amdefine-1.0.1" - ]; - }) - (sources."optimist-0.3.7" // { - dependencies = [ - sources."wordwrap-0.0.3" - ]; - }) + sources."source-map-0.5.6" sources."uglify-to-browserify-1.0.2" + (sources."yargs-3.10.0" // { + dependencies = [ + sources."camelcase-1.2.1" + (sources."cliui-2.1.0" // { + dependencies = [ + (sources."center-align-0.1.3" // { + dependencies = [ + (sources."align-text-0.1.4" // { + dependencies = [ + (sources."kind-of-3.1.0" // { + dependencies = [ + sources."is-buffer-1.1.4" + ]; + }) + sources."longest-1.0.1" + sources."repeat-string-1.6.1" + ]; + }) + sources."lazy-cache-1.0.4" + ]; + }) + (sources."right-align-0.1.3" // { + dependencies = [ + (sources."align-text-0.1.4" // { + dependencies = [ + (sources."kind-of-3.1.0" // { + dependencies = [ + sources."is-buffer-1.1.4" + ]; + }) + sources."longest-1.0.1" + sources."repeat-string-1.6.1" + ]; + }) + ]; + }) + sources."wordwrap-0.0.2" + ]; + }) + sources."decamelize-1.2.0" + sources."window-size-0.1.0" + ]; + }) + ]; + }) + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" ]; }) - sources."resolve-1.2.0" (sources."global-paths-0.1.2" // { dependencies = [ sources."array-unique-0.2.1" @@ -18727,7 +19386,7 @@ in }) ]; }) - sources."moment-2.10.6" + sources."moment-2.17.1" (sources."node.extend-1.0.10" // { dependencies = [ sources."is-0.3.0" @@ -18745,10 +19404,10 @@ in azure-cli = nodeEnv.buildNodePackage { name = "azure-cli"; packageName = "azure-cli"; - version = "0.10.9"; + version = "0.10.10"; src = fetchurl { - url = "https://registry.npmjs.org/azure-cli/-/azure-cli-0.10.9.tgz"; - sha1 = "f3f795f069c91fe7335d55f4199fc66c860496df"; + url = "https://registry.npmjs.org/azure-cli/-/azure-cli-0.10.10.tgz"; + sha1 = "f50fe398f935d7e8751b7e84dcf02616553fcfa4"; }; dependencies = [ (sources."adal-node-0.1.21" // { @@ -18796,7 +19455,7 @@ in sources."azure-arm-insights-0.11.3" sources."azure-arm-iothub-0.1.4" sources."azure-arm-servermanagement-0.1.2" - sources."azure-arm-network-0.17.0" + sources."azure-arm-network-0.18.0" sources."azure-arm-powerbiembedded-0.1.0" sources."azure-arm-trafficmanager-0.10.5" sources."azure-arm-dns-0.11.1" @@ -18817,7 +19476,7 @@ in }) sources."azure-asm-network-0.13.0" sources."azure-arm-resource-1.6.1-preview" - sources."azure-arm-storage-0.13.1-preview" + sources."azure-arm-storage-0.15.0-preview" sources."azure-asm-sb-0.10.1" sources."azure-asm-sql-0.10.1" sources."azure-asm-storage-0.12.0" @@ -18827,15 +19486,21 @@ in sources."moment-2.14.1" ]; }) - (sources."azure-storage-1.3.0" // { + (sources."azure-storage-2.0.0" // { dependencies = [ - sources."extend-1.2.1" sources."browserify-mime-1.2.9" + sources."extend-1.2.1" (sources."json-edm-parser-0.1.2" // { dependencies = [ sources."jsonparse-1.2.0" ]; }) + (sources."md5.js-1.3.4" // { + dependencies = [ + sources."hash-base-3.0.3" + sources."inherits-2.0.3" + ]; + }) sources."node-uuid-1.4.7" (sources."readable-stream-2.0.6" // { dependencies = [ @@ -18904,7 +19569,7 @@ in }) sources."jsonminify-0.4.1" sources."jsrsasign-4.8.2" - (sources."kuduscript-1.0.9" // { + (sources."kuduscript-1.0.13" // { dependencies = [ (sources."commander-1.1.1" // { dependencies = [ @@ -18915,18 +19580,18 @@ in ]; }) sources."moment-2.17.1" - (sources."ms-rest-1.15.4" // { + (sources."ms-rest-1.15.5" // { dependencies = [ sources."duplexer-0.1.1" ]; }) - (sources."ms-rest-azure-1.15.4" // { + (sources."ms-rest-azure-1.15.5" // { dependencies = [ sources."async-0.2.7" ]; }) sources."node-forge-0.6.23" - sources."omelette-0.1.0" + sources."omelette-0.3.2" (sources."openssl-wrapper-0.2.1" // { dependencies = [ sources."debug-0.7.4" @@ -18949,7 +19614,7 @@ in ]; }) sources."ncp-0.4.2" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -19030,7 +19695,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -19061,7 +19726,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -19123,7 +19788,7 @@ in }) sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -19157,7 +19822,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -19179,7 +19844,7 @@ in sources."asap-2.0.5" ]; }) - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) ]; @@ -19279,7 +19944,7 @@ in ]; }) sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -19304,7 +19969,7 @@ in sources."prepend-http-1.0.4" (sources."read-all-stream-2.2.0" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -19469,7 +20134,7 @@ in sources."jsonfile-2.4.0" sources."klaw-1.3.1" sources."path-is-absolute-1.0.1" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -19562,13 +20227,13 @@ in browserify = nodeEnv.buildNodePackage { name = "browserify"; packageName = "browserify"; - version = "14.0.0"; + version = "14.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/browserify/-/browserify-14.0.0.tgz"; - sha1 = "67e6cfe7acb2fb1a1908e8a763452306de0bcf38"; + url = "https://registry.npmjs.org/browserify/-/browserify-14.1.0.tgz"; + sha1 = "0508cc1e7bf4c152312c2fa523e676c0b0b92311"; }; dependencies = [ - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" @@ -19604,7 +20269,7 @@ in sources."ieee754-1.1.8" ]; }) - sources."cached-path-relative-1.0.0" + sources."cached-path-relative-1.0.1" (sources."concat-stream-1.5.2" // { dependencies = [ sources."typedarray-0.0.6" @@ -19651,10 +20316,13 @@ in dependencies = [ sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) (sources."parse-asn1-5.0.0" // { @@ -19678,10 +20346,13 @@ in (sources."create-ecdh-4.0.0" // { dependencies = [ sources."bn.js-4.11.6" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) ]; @@ -19699,7 +20370,7 @@ in sources."bn.js-4.11.6" (sources."miller-rabin-4.0.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" ]; }) ]; @@ -19797,7 +20468,7 @@ in sources."stream-splicer-2.0.0" ]; }) - (sources."module-deps-4.0.8" // { + (sources."module-deps-4.1.1" // { dependencies = [ (sources."detective-4.3.2" // { dependencies = [ @@ -19818,7 +20489,7 @@ in sources."punycode-1.4.1" sources."querystring-es3-0.2.1" sources."read-only-stream-2.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -19827,7 +20498,11 @@ in sources."util-deprecate-1.0.2" ]; }) - sources."resolve-1.2.0" + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" + ]; + }) (sources."shasum-1.0.2" // { dependencies = [ (sources."json-stable-stringify-0.0.1" // { @@ -20312,7 +20987,7 @@ in }) ]; }) - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -20395,11 +21070,11 @@ in sources."unzip-response-2.0.1" ]; }) - (sources."simple-peer-6.2.2" // { + (sources."simple-peer-6.4.3" // { dependencies = [ sources."get-browser-rtc-1.0.2" sources."randombytes-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -20411,9 +21086,10 @@ in }) ]; }) - (sources."simple-websocket-4.3.0" // { + (sources."simple-websocket-4.3.1" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + sources."randombytes-2.0.3" + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -20423,7 +21099,7 @@ in sources."util-deprecate-1.0.2" ]; }) - (sources."ws-2.0.3" // { + (sources."ws-2.1.0" // { dependencies = [ sources."ultron-1.1.0" ]; @@ -20437,7 +21113,7 @@ in ]; }) sources."uniq-1.0.1" - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -20551,7 +21227,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -20603,10 +21279,10 @@ in coffee-script = nodeEnv.buildNodePackage { name = "coffee-script"; packageName = "coffee-script"; - version = "1.12.3"; + version = "1.12.4"; src = fetchurl { - url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.3.tgz"; - sha1 = "de5f4b1b934a4e9f915c57acd7ad323f68f715db"; + url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.4.tgz"; + sha1 = "fe1bced97fe1fb3927b998f2b45616e0658be1ff"; }; buildInputs = globalBuildInputs; meta = { @@ -20751,7 +21427,11 @@ in sources."interpret-1.0.1" (sources."rechoir-0.6.2" // { dependencies = [ - sources."resolve-1.2.0" + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" + ]; + }) ]; }) ]; @@ -20762,7 +21442,7 @@ in dependencies = [ (sources."browserify-13.3.0" // { dependencies = [ - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" @@ -20799,7 +21479,7 @@ in sources."isarray-1.0.0" ]; }) - sources."cached-path-relative-1.0.0" + sources."cached-path-relative-1.0.1" (sources."concat-stream-1.5.2" // { dependencies = [ sources."typedarray-0.0.6" @@ -20846,10 +21526,13 @@ in dependencies = [ sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) (sources."parse-asn1-5.0.0" // { @@ -20873,10 +21556,13 @@ in (sources."create-ecdh-4.0.0" // { dependencies = [ sources."bn.js-4.11.6" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) ]; @@ -20894,7 +21580,7 @@ in sources."bn.js-4.11.6" (sources."miller-rabin-4.0.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" ]; }) ]; @@ -20992,7 +21678,7 @@ in sources."stream-splicer-2.0.0" ]; }) - (sources."module-deps-4.0.8" // { + (sources."module-deps-4.1.1" // { dependencies = [ (sources."detective-4.3.2" // { dependencies = [ @@ -21013,7 +21699,7 @@ in sources."punycode-1.4.1" sources."querystring-es3-0.2.1" sources."read-only-stream-2.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -21022,7 +21708,11 @@ in sources."util-deprecate-1.0.2" ]; }) - sources."resolve-1.2.0" + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" + ]; + }) (sources."shasum-1.0.2" // { dependencies = [ (sources."json-stable-stringify-0.0.1" // { @@ -21327,7 +22017,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npm-2.15.11" // { @@ -21459,7 +22149,7 @@ in (sources."concat-stream-1.6.0" // { dependencies = [ sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -21563,7 +22253,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -21585,7 +22275,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -21647,7 +22337,7 @@ in }) sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -21775,7 +22465,7 @@ in sources."minimist-0.0.8" ]; }) - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -21968,7 +22658,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -22029,7 +22719,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tunnel-agent-0.4.3" ]; @@ -22044,7 +22734,7 @@ in }) (sources."nopt-3.0.1" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) sources."q-1.0.1" @@ -22116,7 +22806,7 @@ in ]; }) sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22147,7 +22837,7 @@ in sources."pinkie-2.0.4" ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22165,12 +22855,12 @@ in }) (sources."registry-url-3.1.0" // { dependencies = [ - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) ]; @@ -22538,7 +23228,7 @@ in ]; }) sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22673,7 +23363,7 @@ in sources."split2-2.1.1" (sources."through2-2.0.3" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22710,7 +23400,7 @@ in }) ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22759,7 +23449,7 @@ in (sources."tar-stream-1.5.2" // { dependencies = [ sources."bl-1.2.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22804,13 +23494,13 @@ in sha1 = "4bec1f64f7931b84884306fb5b37a0d269d81e8d"; }; dependencies = [ - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" ]; }) - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -22864,7 +23554,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -22925,7 +23615,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -23190,10 +23880,10 @@ in eslint = nodeEnv.buildNodePackage { name = "eslint"; packageName = "eslint"; - version = "3.15.0"; + version = "3.16.1"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-3.15.0.tgz"; - sha1 = "bdcc6a6c5ffe08160e7b93c066695362a91e30f2"; + url = "https://registry.npmjs.org/eslint/-/eslint-3.16.1.tgz"; + sha1 = "9bc31fc7341692cf772e80607508f67d711c5609"; }; dependencies = [ (sources."babel-code-frame-6.22.0" // { @@ -23222,7 +23912,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -23313,7 +24003,7 @@ in sources."pinkie-2.0.4" ]; }) - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" ]; }) sources."graceful-fs-4.1.11" @@ -23350,8 +24040,8 @@ in sources."path-is-absolute-1.0.1" ]; }) - sources."globals-9.14.0" - sources."ignore-3.2.2" + sources."globals-9.16.0" + sources."ignore-3.2.4" sources."imurmurhash-0.1.4" (sources."inquirer-0.12.0" // { dependencies = [ @@ -23409,7 +24099,7 @@ in sources."through-2.3.8" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -23481,7 +24171,11 @@ in sources."interpret-1.0.1" (sources."rechoir-0.6.2" // { dependencies = [ - sources."resolve-1.2.0" + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" + ]; + }) ]; }) ]; @@ -23700,9 +24394,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -23740,7 +24434,7 @@ in (sources."readdirp-2.1.0" // { dependencies = [ sources."graceful-fs-4.1.11" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -23753,7 +24447,7 @@ in sources."set-immediate-shim-1.0.1" ]; }) - (sources."fsevents-1.0.17" // { + (sources."fsevents-1.1.1" // { dependencies = [ sources."nan-2.5.1" (sources."node-pre-gyp-0.6.33" // { @@ -23765,7 +24459,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -23773,7 +24467,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -23813,12 +24507,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -23862,7 +24556,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -23923,7 +24617,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -24089,7 +24783,7 @@ in ]; }) sources."ncp-0.4.2" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -24206,7 +24900,7 @@ in sources."grunt-known-options-1.1.0" (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) sources."resolve-1.1.7" @@ -24229,11 +24923,11 @@ in sha256 = "a51a5beef55c14c68630275d51cf66c44a4462d1b20c0f08aef6d88a62ca077c"; }; dependencies = [ - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" (sources."jade-1.11.0" // { dependencies = [ sources."character-parser-1.2.1" - (sources."clean-css-3.4.24" // { + (sources."clean-css-3.4.25" // { dependencies = [ (sources."commander-2.8.1" // { dependencies = [ @@ -24488,7 +25182,7 @@ in sources."replace-ext-0.0.1" (sources."through2-2.0.3" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -24572,9 +25266,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -24670,7 +25364,11 @@ in sources."lodash.isstring-4.0.1" sources."lodash.mapvalues-4.6.0" sources."rechoir-0.6.2" - sources."resolve-1.2.0" + (sources."resolve-1.3.2" // { + dependencies = [ + sources."path-parse-1.0.5" + ]; + }) ]; }) sources."minimist-1.2.0" @@ -25304,10 +26002,10 @@ in karma = nodeEnv.buildNodePackage { name = "karma"; packageName = "karma"; - version = "1.4.1"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/karma/-/karma-1.4.1.tgz"; - sha1 = "41981a71d54237606b0a3ea8c58c90773f41650e"; + url = "https://registry.npmjs.org/karma/-/karma-1.5.0.tgz"; + sha1 = "9c4c14f0400bef2c04c8e8e6bff59371025cc009"; }; dependencies = [ sources."bluebird-3.4.7" @@ -25403,9 +26101,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -25443,7 +26141,7 @@ in sources."path-is-absolute-1.0.1" (sources."readdirp-2.1.0" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -25456,7 +26154,7 @@ in sources."set-immediate-shim-1.0.1" ]; }) - (sources."fsevents-1.0.17" // { + (sources."fsevents-1.1.1" // { dependencies = [ sources."nan-2.5.1" (sources."node-pre-gyp-0.6.33" // { @@ -25468,7 +26166,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -25476,7 +26174,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -25516,12 +26214,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -25565,7 +26263,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -25626,7 +26324,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -25637,6 +26335,7 @@ in sources."uuid-3.0.1" ]; }) + sources."rimraf-2.5.4" sources."semver-5.3.0" (sources."tar-2.2.1" // { dependencies = [ @@ -25683,15 +26382,16 @@ in sources."lodash-4.17.4" ]; }) - (sources."connect-3.5.0" // { + (sources."connect-3.6.0" // { dependencies = [ - (sources."debug-2.2.0" // { + (sources."debug-2.6.1" // { dependencies = [ - sources."ms-0.7.1" + sources."ms-0.7.2" ]; }) - (sources."finalhandler-0.5.0" // { + (sources."finalhandler-1.0.0" // { dependencies = [ + sources."encodeurl-1.0.1" sources."escape-html-1.0.3" (sources."on-finished-2.3.0" // { dependencies = [ @@ -25790,16 +26490,16 @@ in }) sources."qjobs-1.1.5" sources."range-parser-1.2.0" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."safe-buffer-5.0.1" - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ (sources."debug-2.3.3" // { dependencies = [ sources."ms-0.7.2" ]; }) - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ (sources."accepts-1.3.3" // { dependencies = [ @@ -25821,7 +26521,7 @@ in sources."wtf-8-1.0.0" ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -25837,12 +26537,12 @@ in }) sources."object-assign-4.1.0" sources."socket.io-adapter-0.5.0" - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."component-inherit-0.0.3" (sources."engine.io-parser-1.3.2" // { @@ -25873,7 +26573,7 @@ in }) ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -25912,7 +26612,7 @@ in ]; }) sources."source-map-0.5.6" - (sources."tmp-0.0.28" // { + (sources."tmp-0.0.31" // { dependencies = [ sources."os-tmpdir-1.0.2" ]; @@ -26254,7 +26954,7 @@ in dependencies = [ (sources."through2-2.0.3" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -26378,9 +27078,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -26445,7 +27145,7 @@ in sources."graceful-fs-4.1.11" (sources."gulp-sourcemaps-1.6.0" // { dependencies = [ - sources."convert-source-map-1.3.0" + sources."convert-source-map-1.4.0" ]; }) sources."is-valid-glob-0.3.0" @@ -26458,7 +27158,7 @@ in ]; }) sources."object-assign-4.1.1" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -26669,7 +27369,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -26758,7 +27458,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -26819,7 +27519,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -26831,7 +27531,7 @@ in ]; }) sources."retry-0.8.0" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -26863,7 +27563,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -26923,7 +27623,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."once-1.3.3" // { @@ -26952,7 +27652,7 @@ in sources."minimist-0.0.8" ]; }) - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -27074,7 +27774,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -27082,7 +27782,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -27170,7 +27870,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -27231,7 +27931,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -27242,7 +27942,7 @@ in sources."uuid-3.0.1" ]; }) - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."semver-5.3.0" (sources."tar-2.2.1" // { dependencies = [ @@ -27564,19 +28264,19 @@ in ]; }) sources."path-is-absolute-1.0.1" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) sources."semver-4.3.6" - (sources."serve-favicon-2.3.2" // { + (sources."serve-favicon-2.4.0" // { dependencies = [ - sources."etag-1.7.0" - sources."fresh-0.3.0" + sources."etag-1.8.0" + sources."fresh-0.4.0" sources."ms-0.7.2" sources."parseurl-1.3.1" ]; @@ -27598,7 +28298,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -27606,7 +28306,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -27688,7 +28388,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -27749,7 +28449,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -27865,7 +28565,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -27873,7 +28573,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -27955,7 +28655,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -28016,7 +28716,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -28125,7 +28825,7 @@ in sources."isexe-1.1.2" ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -28197,7 +28897,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -28205,7 +28905,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -28246,12 +28946,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -28295,7 +28995,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -28356,7 +29056,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -28526,9 +29226,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -28567,7 +29267,7 @@ in (sources."readdirp-2.1.0" // { dependencies = [ sources."graceful-fs-4.1.11" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -28580,7 +29280,7 @@ in sources."set-immediate-shim-1.0.1" ]; }) - (sources."fsevents-1.0.17" // { + (sources."fsevents-1.1.1" // { dependencies = [ sources."nan-2.5.1" (sources."node-pre-gyp-0.6.33" // { @@ -28592,7 +29292,7 @@ in }) (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -28600,7 +29300,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -28640,12 +29340,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -28689,7 +29389,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -28750,7 +29450,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -28891,7 +29591,7 @@ in dependencies = [ (sources."nopt-1.0.10" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) ]; @@ -28964,7 +29664,7 @@ in ]; }) sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -28995,7 +29695,7 @@ in sources."pinkie-2.0.4" ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -29013,12 +29713,12 @@ in }) (sources."registry-url-3.1.0" // { dependencies = [ - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) ]; @@ -29138,7 +29838,7 @@ in sources."domhandler-2.3.0" sources."domutils-1.5.1" sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -29304,7 +30004,7 @@ in }) (sources."i18next-1.10.6" // { dependencies = [ - (sources."cookies-0.6.2" // { + (sources."cookies-0.7.0" // { dependencies = [ sources."depd-1.1.0" sources."keygrip-1.0.1" @@ -29437,9 +30137,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -29515,7 +30215,7 @@ in sources."process-nextick-args-1.0.7" ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -29565,7 +30265,7 @@ in sources."mustache-2.3.0" (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."oauth2orize-1.7.0" // { @@ -29717,7 +30417,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -29748,7 +30448,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -29809,7 +30509,7 @@ in }) sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -29821,7 +30521,7 @@ in }) ]; }) - (sources."node-red-node-email-0.1.16" // { + (sources."node-red-node-email-0.1.21" // { dependencies = [ (sources."nodemailer-1.11.0" // { dependencies = [ @@ -29967,7 +30667,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -30027,7 +30727,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -30057,7 +30757,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -30098,12 +30798,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -30147,7 +30847,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -30207,7 +30907,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -30387,7 +31087,7 @@ in (sources."config-0.4.15" // { dependencies = [ sources."js-yaml-0.3.7" - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" (sources."vows-0.8.1" // { dependencies = [ sources."eyes-0.1.8" @@ -30514,13 +31214,13 @@ in npm = nodeEnv.buildNodePackage { name = "npm"; packageName = "npm"; - version = "4.2.0"; + version = "4.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/npm/-/npm-4.2.0.tgz"; - sha1 = "d4eeb6791b996fe3085535d749338d1fe48df13a"; + url = "https://registry.npmjs.org/npm/-/npm-4.3.0.tgz"; + sha1 = "78e97142408c8383bff10a0e4036e9f77f00ce28"; }; dependencies = [ - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" @@ -30530,7 +31230,7 @@ in sources."ansi-regex-2.1.1" sources."ansicolors-0.3.2" sources."ansistyles-0.1.3" - sources."aproba-1.0.4" + sources."aproba-1.1.1" sources."archy-1.0.0" sources."asap-2.0.5" sources."chownr-1.0.1" @@ -30594,7 +31294,7 @@ in }) sources."graceful-fs-4.1.11" sources."has-unicode-2.0.1" - sources."hosted-git-info-2.1.5" + sources."hosted-git-info-2.2.0" sources."iferr-0.1.5" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -30619,6 +31319,7 @@ in sources."promzard-0.3.0" ]; }) + sources."lazy-property-1.0.0" sources."lockfile-1.0.3" (sources."lodash._baseuniq-4.6.0" // { dependencies = [ @@ -30746,7 +31447,7 @@ in ]; }) sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" (sources."osenv-0.1.4" // { dependencies = [ sources."os-homedir-1.0.2" @@ -30790,7 +31491,7 @@ in ]; }) sources."read-package-tree-5.1.5" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -30833,7 +31534,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -30894,7 +31595,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -31046,7 +31747,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -31107,7 +31808,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -31123,7 +31824,7 @@ in sources."slide-1.1.6" sources."chownr-0.0.2" sources."mkdirp-0.3.5" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -31161,7 +31862,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -31218,7 +31919,7 @@ in sources."osenv-0.0.3" (sources."nopt-2.2.1" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) sources."semver-2.3.2" @@ -31246,7 +31947,7 @@ in sources."minimist-0.0.8" ]; }) - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -31308,7 +32009,7 @@ in ]; }) sources."findit-1.2.0" - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" ]; buildInputs = globalBuildInputs; meta = { @@ -31320,10 +32021,10 @@ in npm-check-updates = nodeEnv.buildNodePackage { name = "npm-check-updates"; packageName = "npm-check-updates"; - version = "2.10.2"; + version = "2.10.3"; src = fetchurl { - url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-2.10.2.tgz"; - sha1 = "9614c58ec84d31702a85881c844c3fb93611a585"; + url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-2.10.3.tgz"; + sha1 = "40540278e81e60e2f28df3bc79bf77e157f95555"; }; dependencies = [ sources."bluebird-3.4.7" @@ -31569,7 +32270,7 @@ in (sources."concat-stream-1.6.0" // { dependencies = [ sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -31642,7 +32343,7 @@ in ]; }) sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" (sources."osenv-0.1.4" // { dependencies = [ sources."os-homedir-1.0.2" @@ -31724,7 +32425,7 @@ in }) (sources."har-validator-2.0.6" // { dependencies = [ - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -31786,7 +32487,7 @@ in }) sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -31958,7 +32659,7 @@ in ]; }) sources."read-all-stream-3.1.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -31980,24 +32681,24 @@ in }) (sources."registry-auth-token-3.1.0" // { dependencies = [ - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) ]; }) (sources."registry-url-3.1.0" // { dependencies = [ - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) ]; @@ -32396,7 +33097,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -32457,7 +33158,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -32469,15 +33170,15 @@ in ]; }) sources."semver-5.3.0" - (sources."serve-favicon-2.3.2" // { + (sources."serve-favicon-2.4.0" // { dependencies = [ - sources."etag-1.7.0" - sources."fresh-0.3.0" + sources."etag-1.8.0" + sources."fresh-0.4.0" sources."ms-0.7.2" sources."parseurl-1.3.1" ]; }) - (sources."service-runner-2.1.15" // { + (sources."service-runner-2.2.4" // { dependencies = [ sources."bluebird-3.4.7" (sources."bunyan-1.8.5" // { @@ -32539,7 +33240,7 @@ in ]; }) sources."hot-shots-4.3.1" - (sources."limitation-0.1.9" // { + (sources."limitation-0.2.0" // { dependencies = [ (sources."kad-git+https://github.com/gwicke/kad.git#master" // { dependencies = [ @@ -32564,7 +33265,7 @@ in }) ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -32698,6 +33399,16 @@ in sources."yargs-parser-4.2.1" ]; }) + (sources."dnscache-1.0.1" // { + dependencies = [ + sources."asap-2.0.5" + (sources."lodash.clone-4.3.2" // { + dependencies = [ + sources."lodash._baseclone-4.5.7" + ]; + }) + ]; + }) ]; }) sources."simplediff-0.1.1" @@ -32863,7 +33574,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -33140,7 +33851,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -33263,12 +33974,12 @@ in ]; }) sources."range-parser-1.2.0" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."torrent-stream-1.0.3" // { @@ -33363,7 +34074,7 @@ in }) ]; }) - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -33447,11 +34158,11 @@ in sources."unzip-response-2.0.1" ]; }) - (sources."simple-peer-6.2.2" // { + (sources."simple-peer-6.4.3" // { dependencies = [ sources."get-browser-rtc-1.0.2" sources."randombytes-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -33463,9 +34174,10 @@ in }) ]; }) - (sources."simple-websocket-4.3.0" // { + (sources."simple-websocket-4.3.1" // { dependencies = [ - (sources."readable-stream-2.2.2" // { + sources."randombytes-2.0.3" + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -33475,7 +34187,7 @@ in sources."util-deprecate-1.0.2" ]; }) - (sources."ws-2.0.3" // { + (sources."ws-2.1.0" // { dependencies = [ sources."ultron-1.1.0" ]; @@ -33489,7 +34201,7 @@ in ]; }) sources."uniq-1.0.1" - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -33744,14 +34456,14 @@ in sources."xtend-4.0.1" ]; }) - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ (sources."debug-2.3.3" // { dependencies = [ sources."ms-0.7.2" ]; }) - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ (sources."accepts-1.3.3" // { dependencies = [ @@ -33773,7 +34485,7 @@ in sources."wtf-8-1.0.0" ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -33789,12 +34501,12 @@ in }) sources."object-assign-4.1.0" sources."socket.io-adapter-0.5.0" - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."component-inherit-0.0.3" (sources."engine.io-parser-1.3.2" // { @@ -33825,7 +34537,7 @@ in }) ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -34014,7 +34726,7 @@ in ]; }) sources."random-access-file-0.3.2" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -34050,7 +34762,7 @@ in }) (sources."fluent-ffmpeg-2.1.0" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -34120,7 +34832,7 @@ in sources."jsonfile-2.4.0" sources."klaw-1.3.1" sources."path-is-absolute-1.0.1" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -34185,7 +34897,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -34269,7 +34981,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -34366,7 +35078,7 @@ in }) sources."private-0.1.7" sources."q-1.4.1" - (sources."recast-0.11.21" // { + (sources."recast-0.11.22" // { dependencies = [ sources."ast-types-0.9.5" sources."esprima-3.1.3" @@ -34534,7 +35246,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -34595,7 +35307,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -34720,6 +35432,12 @@ in (sources."send-0.14.2" // { dependencies = [ sources."destroy-1.0.4" + (sources."http-errors-1.5.1" // { + dependencies = [ + sources."inherits-2.0.3" + sources."setprototypeof-1.0.2" + ]; + }) sources."mime-1.3.4" sources."ms-0.7.2" sources."statuses-1.3.1" @@ -34760,6 +35478,13 @@ in ]; }) sources."depd-1.1.0" + (sources."http-errors-1.5.1" // { + dependencies = [ + sources."inherits-2.0.3" + sources."setprototypeof-1.0.2" + sources."statuses-1.3.1" + ]; + }) sources."iconv-lite-0.4.15" (sources."on-finished-2.3.0" // { dependencies = [ @@ -34826,7 +35551,7 @@ in sources."esprima-3.1.3" ]; }) - (sources."cookies-0.6.2" // { + (sources."cookies-0.7.0" // { dependencies = [ sources."depd-1.1.0" sources."keygrip-1.0.1" @@ -34868,7 +35593,7 @@ in sources."supports-color-2.0.0" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -34929,7 +35654,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -35048,7 +35773,7 @@ in }) sources."entities-1.1.1" sources."inherits-2.0.3" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -35067,7 +35792,7 @@ in ]; }) sources."jju-1.3.0" - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" @@ -35079,10 +35804,11 @@ in ]; }) sources."sinopia-htpasswd-0.4.5" - (sources."http-errors-1.5.1" // { + (sources."http-errors-1.6.1" // { dependencies = [ + sources."depd-1.1.0" sources."inherits-2.0.3" - sources."setprototypeof-1.0.2" + sources."setprototypeof-1.0.3" sources."statuses-1.3.1" ]; }) @@ -35125,7 +35851,7 @@ in sha1 = "b42d3da1a442a489f454c32c628e8ebf0007875c"; }; dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -35153,7 +35879,7 @@ in }) ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -35189,7 +35915,7 @@ in sources."lru-cache-2.2.0" (sources."nopt-2.0.0" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."restify-4.0.3" // { @@ -35324,7 +36050,7 @@ in (sources."sshpk-agent-1.2.1" // { dependencies = [ sources."assert-plus-0.1.5" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -35526,13 +36252,13 @@ in tern = nodeEnv.buildNodePackage { name = "tern"; packageName = "tern"; - version = "0.20.0"; + version = "0.21.0"; src = fetchurl { - url = "https://registry.npmjs.org/tern/-/tern-0.20.0.tgz"; - sha1 = "5058e1ae15a121a1f421500ced0c852c11e6fb34"; + url = "https://registry.npmjs.org/tern/-/tern-0.21.0.tgz"; + sha1 = "809c87a826e112494398cf8894f7c2d1b3464eb7"; }; dependencies = [ - sources."acorn-3.3.0" + sources."acorn-4.0.11" (sources."enhanced-resolve-2.3.0" // { dependencies = [ sources."tapable-0.2.6" @@ -35543,7 +36269,7 @@ in sources."prr-0.0.0" ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -35560,21 +36286,31 @@ in sources."object-assign-4.1.1" ]; }) - (sources."glob-3.2.11" // { + (sources."glob-7.1.1" // { dependencies = [ - sources."inherits-2.0.3" - (sources."minimatch-0.3.0" // { + sources."fs.realpath-1.0.0" + (sources."inflight-1.0.6" // { dependencies = [ - sources."lru-cache-2.7.3" - sources."sigmund-1.0.1" + sources."wrappy-1.0.2" ]; }) + sources."inherits-2.0.3" + (sources."once-1.4.0" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + sources."path-is-absolute-1.0.1" ]; }) - (sources."minimatch-0.2.14" // { + (sources."minimatch-3.0.3" // { dependencies = [ - sources."lru-cache-2.7.3" - sources."sigmund-1.0.1" + (sources."brace-expansion-1.1.6" // { + dependencies = [ + sources."balanced-match-0.4.2" + sources."concat-map-0.0.1" + ]; + }) ]; }) sources."resolve-from-2.0.0" @@ -35663,7 +36399,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -35694,7 +36430,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -35755,7 +36491,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.0.2" + sources."qs-6.0.3" sources."stringstream-0.0.5" sources."tough-cookie-2.2.2" sources."tunnel-agent-0.4.3" @@ -35857,7 +36593,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -35919,7 +36655,7 @@ in }) sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -35961,10 +36697,10 @@ in typescript = nodeEnv.buildNodePackage { name = "typescript"; packageName = "typescript"; - version = "2.1.6"; + version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-2.1.6.tgz"; - sha1 = "40c7e6e9e5da7961b7718b55505f9cac9487a607"; + url = "https://registry.npmjs.org/typescript/-/typescript-2.2.1.tgz"; + sha1 = "4862b662b988a4c8ff691cc7969622d24db76ae9"; }; buildInputs = globalBuildInputs; meta = { @@ -36041,13 +36777,13 @@ in ungit = nodeEnv.buildNodePackage { name = "ungit"; packageName = "ungit"; - version = "1.1.7"; + version = "1.1.8"; src = fetchurl { - url = "https://registry.npmjs.org/ungit/-/ungit-1.1.7.tgz"; - sha1 = "eb4ba66b38ec553396fe21ec338181b88c72bf4b"; + url = "https://registry.npmjs.org/ungit/-/ungit-1.1.8.tgz"; + sha1 = "1519b78475ef5162ef3342c2046889b396add651"; }; dependencies = [ - sources."async-2.1.4" + sources."async-2.1.5" sources."bluebird-3.4.7" sources."blueimp-md5-2.6.0" (sources."body-parser-1.15.2" // { @@ -36098,7 +36834,7 @@ in sources."color-name-1.1.1" ]; }) - (sources."color-string-1.4.0" // { + (sources."color-string-1.5.0" // { dependencies = [ sources."color-name-1.1.1" (sources."simple-swizzle-0.2.2" // { @@ -36124,7 +36860,7 @@ in dependencies = [ (sources."nopt-1.0.10" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) sources."mkdirp-0.3.0" @@ -36358,7 +37094,7 @@ in ]; }) sources."hasher-1.2.0" - sources."ignore-3.2.2" + sources."ignore-3.2.4" (sources."keen.io-0.1.3" // { dependencies = [ sources."underscore-1.5.2" @@ -36372,9 +37108,14 @@ in ]; }) sources."moment-2.17.1" + (sources."node-cache-4.1.1" // { + dependencies = [ + sources."clone-2.1.0" + ]; + }) (sources."npm-4.1.2" // { dependencies = [ - (sources."JSONStream-1.3.0" // { + (sources."JSONStream-1.3.1" // { dependencies = [ sources."jsonparse-1.3.0" sources."through-2.3.8" @@ -36580,7 +37321,7 @@ in ]; }) sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" (sources."osenv-0.1.4" // { dependencies = [ sources."os-tmpdir-1.0.2" @@ -36623,7 +37364,7 @@ in ]; }) sources."read-package-tree-5.1.5" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -36666,7 +37407,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -36727,7 +37468,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -36817,7 +37558,7 @@ in dependencies = [ sources."inherits-2.0.3" sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -36901,7 +37642,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -36962,7 +37703,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -36980,7 +37721,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -37046,12 +37787,12 @@ in sources."stack-trace-0.0.9" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."rimraf-2.5.4" // { @@ -37127,14 +37868,14 @@ in sources."eve-0.4.2" ]; }) - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ (sources."debug-2.3.3" // { dependencies = [ sources."ms-0.7.2" ]; }) - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ (sources."accepts-1.3.3" // { dependencies = [ @@ -37156,7 +37897,7 @@ in sources."wtf-8-1.0.0" ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -37172,12 +37913,12 @@ in }) sources."object-assign-4.1.0" sources."socket.io-adapter-0.5.0" - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."component-inherit-0.0.3" (sources."engine.io-parser-1.3.2" // { @@ -37208,7 +37949,7 @@ in }) ]; }) - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."options-0.0.6" sources."ultron-1.0.2" @@ -37456,7 +38197,7 @@ in sources."osenv-0.0.3" (sources."nopt-2.2.1" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) sources."semver-2.3.2" @@ -37505,7 +38246,7 @@ in sources."jsonfile-2.4.0" sources."klaw-1.3.1" sources."path-is-absolute-1.0.1" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -37570,7 +38311,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -37654,7 +38395,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -37728,7 +38469,7 @@ in ]; }) sources."ajv-keywords-1.5.1" - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -37742,7 +38483,7 @@ in sources."interpret-1.0.1" sources."json-loader-0.5.4" sources."loader-runner-2.3.0" - (sources."loader-utils-0.2.16" // { + (sources."loader-utils-0.2.17" // { dependencies = [ sources."big.js-3.1.3" sources."emojis-list-2.1.0" @@ -37757,7 +38498,7 @@ in sources."prr-0.0.0" ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -37823,10 +38564,13 @@ in dependencies = [ sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) (sources."parse-asn1-5.0.0" // { @@ -37850,10 +38594,13 @@ in (sources."create-ecdh-4.0.0" // { dependencies = [ sources."bn.js-4.11.6" - (sources."elliptic-6.3.3" // { + (sources."elliptic-6.4.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-assert-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" ]; }) ]; @@ -37871,7 +38618,7 @@ in sources."bn.js-4.11.6" (sources."miller-rabin-4.0.0" // { dependencies = [ - sources."brorand-1.0.7" + sources."brorand-1.1.0" ]; }) ]; @@ -37911,7 +38658,7 @@ in sources."process-0.11.9" sources."punycode-1.4.1" sources."querystring-es3-0.2.1" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -38015,7 +38762,7 @@ in }) ]; }) - (sources."watchpack-1.2.0" // { + (sources."watchpack-1.3.1" // { dependencies = [ (sources."chokidar-1.6.1" // { dependencies = [ @@ -38068,9 +38815,9 @@ in sources."normalize-path-2.0.1" (sources."object.omit-2.0.1" // { dependencies = [ - (sources."for-own-0.1.4" // { + (sources."for-own-0.1.5" // { dependencies = [ - sources."for-in-0.1.6" + sources."for-in-1.0.1" ]; }) sources."is-extendable-0.1.1" @@ -38118,7 +38865,7 @@ in }) ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -38131,14 +38878,14 @@ in sources."set-immediate-shim-1.0.1" ]; }) - (sources."fsevents-1.0.17" // { + (sources."fsevents-1.1.1" // { dependencies = [ sources."nan-2.5.1" (sources."node-pre-gyp-0.6.33" // { dependencies = [ (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -38146,7 +38893,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -38186,12 +38933,12 @@ in sources."set-blocking-2.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."deep-extend-0.4.1" sources."ini-1.3.4" sources."minimist-1.2.0" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; }) (sources."request-2.79.0" // { @@ -38235,7 +38982,7 @@ in sources."graceful-readlink-1.0.1" ]; }) - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -38296,7 +39043,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -38547,16 +39294,16 @@ in yarn = nodeEnv.buildNodePackage { name = "yarn"; packageName = "yarn"; - version = "0.19.1"; + version = "0.20.4"; src = fetchurl { - url = "https://registry.npmjs.org/yarn/-/yarn-0.19.1.tgz"; - sha1 = "102ca03ce7fc910a73f719c70bba9e9f9e3b2b4d"; + url = "https://registry.npmjs.org/yarn/-/yarn-0.20.4.tgz"; + sha1 = "575190fee60a27a54d4125a0f7579fc702f01229"; }; dependencies = [ - (sources."babel-runtime-6.22.0" // { + (sources."babel-runtime-6.23.0" // { dependencies = [ sources."core-js-2.4.1" - sources."regenerator-runtime-0.10.1" + sources."regenerator-runtime-0.10.3" ]; }) sources."bytes-2.4.0" @@ -38599,81 +39346,52 @@ in sources."clone-1.0.2" ]; }) - sources."detect-indent-4.0.0" + sources."detect-indent-5.0.0" sources."diff-2.2.3" sources."ini-1.3.4" - (sources."inquirer-1.2.3" // { + (sources."inquirer-3.0.5" // { dependencies = [ sources."ansi-escapes-1.4.0" - (sources."cli-cursor-1.0.2" // { + (sources."cli-cursor-2.1.0" // { dependencies = [ - (sources."restore-cursor-1.0.1" // { + (sources."restore-cursor-2.0.0" // { dependencies = [ - sources."exit-hook-1.1.1" - sources."onetime-1.1.0" + (sources."onetime-2.0.0" // { + dependencies = [ + sources."mimic-fn-1.1.0" + ]; + }) + sources."signal-exit-3.0.2" ]; }) ]; }) sources."cli-width-2.1.0" - (sources."external-editor-1.1.1" // { + (sources."external-editor-2.0.1" // { dependencies = [ - sources."extend-3.0.0" - (sources."spawn-sync-1.0.15" // { - dependencies = [ - (sources."concat-stream-1.6.0" // { - dependencies = [ - sources."inherits-2.0.3" - sources."typedarray-0.0.6" - (sources."readable-stream-2.2.2" // { - dependencies = [ - sources."buffer-shims-1.0.0" - sources."core-util-is-1.0.2" - sources."isarray-1.0.0" - sources."process-nextick-args-1.0.7" - sources."string_decoder-0.10.31" - sources."util-deprecate-1.0.2" - ]; - }) - ]; - }) - sources."os-shim-0.1.3" - ]; - }) - (sources."tmp-0.0.29" // { + (sources."tmp-0.0.31" // { dependencies = [ sources."os-tmpdir-1.0.2" ]; }) ]; }) - (sources."figures-1.7.0" // { + (sources."figures-2.0.0" // { dependencies = [ sources."escape-string-regexp-1.0.5" - sources."object-assign-4.1.1" ]; }) sources."lodash-4.17.4" - sources."mute-stream-0.0.6" - (sources."pinkie-promise-2.0.1" // { - dependencies = [ - sources."pinkie-2.0.4" - ]; - }) + sources."mute-stream-0.0.7" (sources."run-async-2.3.0" // { dependencies = [ sources."is-promise-2.1.0" ]; }) sources."rx-4.1.0" - (sources."string-width-1.0.2" // { + (sources."string-width-2.0.0" // { dependencies = [ - sources."code-point-at-1.1.0" - (sources."is-fullwidth-code-point-1.0.0" // { - dependencies = [ - sources."number-is-nan-1.0.1" - ]; - }) + sources."is-fullwidth-code-point-2.0.0" ]; }) (sources."strip-ansi-3.0.1" // { @@ -38703,7 +39421,7 @@ in sources."ci-info-1.0.0" ]; }) - sources."leven-2.0.0" + sources."leven-2.1.0" (sources."loud-rejection-1.6.0" // { dependencies = [ (sources."currently-unhandled-0.4.1" // { @@ -38761,7 +39479,7 @@ in sources."graceful-fs-4.1.11" (sources."nopt-3.0.6" // { dependencies = [ - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; }) (sources."npmlog-4.0.2" // { @@ -38769,7 +39487,7 @@ in (sources."are-we-there-yet-1.1.2" // { dependencies = [ sources."delegates-1.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -38823,7 +39541,7 @@ in }) ]; }) - sources."object-path-0.11.3" + sources."object-path-0.11.4" (sources."proper-lockfile-2.0.0" // { dependencies = [ sources."graceful-fs-4.1.11" @@ -38835,15 +39553,6 @@ in sources."mute-stream-0.0.7" ]; }) - (sources."repeating-2.0.1" // { - dependencies = [ - (sources."is-finite-1.0.2" // { - dependencies = [ - sources."number-is-nan-1.0.1" - ]; - }) - ]; - }) (sources."request-2.79.0" // { dependencies = [ sources."aws-sign2-0.6.0" @@ -38863,7 +39572,7 @@ in }) (sources."har-validator-2.0.6" // { dependencies = [ - (sources."is-my-json-valid-2.15.0" // { + (sources."is-my-json-valid-2.16.0" // { dependencies = [ sources."generate-function-2.0.0" (sources."generate-object-property-1.2.0" // { @@ -38924,7 +39633,7 @@ in ]; }) sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" (sources."tough-cookie-2.3.2" // { dependencies = [ @@ -38936,7 +39645,7 @@ in ]; }) sources."request-capture-har-1.1.4" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ (sources."glob-7.1.1" // { dependencies = [ @@ -38959,11 +39668,7 @@ in }) sources."roadrunner-1.1.0" sources."semver-5.3.0" - (sources."strip-bom-2.0.0" // { - dependencies = [ - sources."is-utf8-0.2.1" - ]; - }) + sources."strip-bom-3.0.0" (sources."tar-2.2.1" // { dependencies = [ sources."block-stream-0.0.9" @@ -38987,7 +39692,7 @@ in }) ]; }) - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -39025,4 +39730,1127 @@ in }; production = true; }; + yo = nodeEnv.buildNodePackage { + name = "yo"; + packageName = "yo"; + version = "1.8.5"; + src = fetchurl { + url = "https://registry.npmjs.org/yo/-/yo-1.8.5.tgz"; + sha1 = "776ab9ec79a7882f8d4f7a9e10214fdab050d928"; + }; + dependencies = [ + sources."async-1.5.2" + (sources."chalk-1.1.3" // { + dependencies = [ + sources."ansi-styles-2.2.1" + sources."escape-string-regexp-1.0.5" + (sources."has-ansi-2.0.0" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + (sources."strip-ansi-3.0.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + sources."supports-color-2.0.0" + ]; + }) + sources."cli-list-0.1.8" + (sources."configstore-1.4.0" // { + dependencies = [ + sources."graceful-fs-4.1.11" + (sources."mkdirp-0.5.1" // { + dependencies = [ + sources."minimist-0.0.8" + ]; + }) + sources."object-assign-4.1.1" + sources."os-tmpdir-1.0.2" + (sources."osenv-0.1.4" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + sources."uuid-2.0.3" + (sources."write-file-atomic-1.3.1" // { + dependencies = [ + sources."imurmurhash-0.1.4" + sources."slide-1.1.6" + ]; + }) + (sources."xdg-basedir-2.0.0" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + ]; + }) + (sources."cross-spawn-3.0.1" // { + dependencies = [ + (sources."lru-cache-4.0.2" // { + dependencies = [ + sources."pseudomap-1.0.2" + sources."yallist-2.0.0" + ]; + }) + (sources."which-1.2.12" // { + dependencies = [ + sources."isexe-1.1.2" + ]; + }) + ]; + }) + (sources."figures-1.7.0" // { + dependencies = [ + sources."escape-string-regexp-1.0.5" + sources."object-assign-4.1.1" + ]; + }) + (sources."fullname-2.1.0" // { + dependencies = [ + (sources."npmconf-2.1.2" // { + dependencies = [ + (sources."config-chain-1.1.11" // { + dependencies = [ + sources."proto-list-1.2.4" + ]; + }) + sources."inherits-2.0.3" + sources."ini-1.3.4" + (sources."mkdirp-0.5.1" // { + dependencies = [ + sources."minimist-0.0.8" + ]; + }) + (sources."nopt-3.0.6" // { + dependencies = [ + sources."abbrev-1.1.0" + ]; + }) + (sources."once-1.3.3" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + (sources."osenv-0.1.4" // { + dependencies = [ + sources."os-homedir-1.0.2" + sources."os-tmpdir-1.0.2" + ]; + }) + sources."semver-4.3.6" + sources."uid-number-0.0.5" + ]; + }) + sources."pify-2.3.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + ]; + }) + (sources."got-5.7.1" // { + dependencies = [ + (sources."create-error-class-3.0.2" // { + dependencies = [ + sources."capture-stack-trace-1.0.0" + ]; + }) + sources."duplexer2-0.1.4" + sources."is-redirect-1.0.0" + sources."is-retry-allowed-1.1.0" + sources."is-stream-1.1.0" + sources."lowercase-keys-1.0.0" + sources."node-status-codes-1.0.0" + sources."object-assign-4.1.1" + (sources."parse-json-2.2.0" // { + dependencies = [ + (sources."error-ex-1.3.0" // { + dependencies = [ + sources."is-arrayish-0.2.1" + ]; + }) + ]; + }) + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + sources."read-all-stream-3.1.0" + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."inherits-2.0.3" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + sources."timed-out-3.1.3" + sources."unzip-response-1.0.2" + (sources."url-parse-lax-1.0.0" // { + dependencies = [ + sources."prepend-http-1.0.4" + ]; + }) + ]; + }) + (sources."humanize-string-1.0.1" // { + dependencies = [ + sources."decamelize-1.2.0" + ]; + }) + (sources."inquirer-0.11.4" // { + dependencies = [ + sources."ansi-escapes-1.4.0" + sources."ansi-regex-2.1.1" + (sources."cli-cursor-1.0.2" // { + dependencies = [ + (sources."restore-cursor-1.0.1" // { + dependencies = [ + sources."exit-hook-1.1.1" + sources."onetime-1.1.0" + ]; + }) + ]; + }) + sources."cli-width-1.1.1" + (sources."readline2-1.0.1" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + sources."mute-stream-0.0.5" + ]; + }) + (sources."run-async-0.1.0" // { + dependencies = [ + (sources."once-1.4.0" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + ]; + }) + sources."rx-lite-3.1.2" + (sources."string-width-1.0.2" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + ]; + }) + sources."strip-ansi-3.0.1" + sources."through-2.3.8" + ]; + }) + (sources."insight-0.7.0" // { + dependencies = [ + (sources."inquirer-0.10.1" // { + dependencies = [ + sources."ansi-escapes-1.4.0" + sources."ansi-regex-2.1.1" + (sources."cli-cursor-1.0.2" // { + dependencies = [ + (sources."restore-cursor-1.0.1" // { + dependencies = [ + sources."exit-hook-1.1.1" + sources."onetime-1.1.0" + ]; + }) + ]; + }) + sources."cli-width-1.1.1" + (sources."readline2-1.0.1" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + sources."mute-stream-0.0.5" + ]; + }) + (sources."run-async-0.1.0" // { + dependencies = [ + (sources."once-1.4.0" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + ]; + }) + sources."rx-lite-3.1.2" + sources."strip-ansi-3.0.1" + sources."through-2.3.8" + ]; + }) + (sources."lodash.debounce-3.1.1" // { + dependencies = [ + sources."lodash._getnative-3.9.1" + ]; + }) + sources."object-assign-4.1.1" + (sources."os-name-1.0.3" // { + dependencies = [ + (sources."osx-release-1.1.0" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + (sources."win-release-1.1.1" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + ]; + }) + (sources."request-2.79.0" // { + dependencies = [ + sources."aws-sign2-0.6.0" + sources."aws4-1.6.0" + sources."caseless-0.11.0" + (sources."combined-stream-1.0.5" // { + dependencies = [ + sources."delayed-stream-1.0.0" + ]; + }) + sources."extend-3.0.0" + sources."forever-agent-0.6.1" + (sources."form-data-2.1.2" // { + dependencies = [ + sources."asynckit-0.4.0" + ]; + }) + (sources."har-validator-2.0.6" // { + dependencies = [ + (sources."commander-2.9.0" // { + dependencies = [ + sources."graceful-readlink-1.0.1" + ]; + }) + (sources."is-my-json-valid-2.16.0" // { + dependencies = [ + sources."generate-function-2.0.0" + (sources."generate-object-property-1.2.0" // { + dependencies = [ + sources."is-property-1.0.2" + ]; + }) + sources."jsonpointer-4.0.1" + sources."xtend-4.0.1" + ]; + }) + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + ]; + }) + (sources."hawk-3.1.3" // { + dependencies = [ + sources."hoek-2.16.3" + sources."boom-2.10.1" + sources."cryptiles-2.0.5" + sources."sntp-1.0.9" + ]; + }) + (sources."http-signature-1.1.1" // { + dependencies = [ + sources."assert-plus-0.2.0" + (sources."jsprim-1.3.1" // { + dependencies = [ + sources."extsprintf-1.0.2" + sources."json-schema-0.2.3" + sources."verror-1.3.6" + ]; + }) + (sources."sshpk-1.10.2" // { + dependencies = [ + sources."asn1-0.2.3" + sources."assert-plus-1.0.0" + sources."dashdash-1.14.1" + sources."getpass-0.1.6" + sources."jsbn-0.1.1" + sources."tweetnacl-0.14.5" + sources."jodid25519-1.0.2" + sources."ecc-jsbn-0.1.1" + sources."bcrypt-pbkdf-1.0.1" + ]; + }) + ]; + }) + sources."is-typedarray-1.0.0" + sources."isstream-0.1.2" + sources."json-stringify-safe-5.0.1" + (sources."mime-types-2.1.14" // { + dependencies = [ + sources."mime-db-1.26.0" + ]; + }) + sources."oauth-sign-0.8.2" + sources."qs-6.3.1" + sources."stringstream-0.0.5" + sources."tunnel-agent-0.4.3" + sources."uuid-3.0.1" + ]; + }) + (sources."tough-cookie-2.3.2" // { + dependencies = [ + sources."punycode-1.4.1" + ]; + }) + ]; + }) + sources."lodash-3.10.1" + (sources."meow-3.7.0" // { + dependencies = [ + (sources."camelcase-keys-2.1.0" // { + dependencies = [ + sources."camelcase-2.1.1" + ]; + }) + sources."decamelize-1.2.0" + (sources."loud-rejection-1.6.0" // { + dependencies = [ + (sources."currently-unhandled-0.4.1" // { + dependencies = [ + sources."array-find-index-1.0.2" + ]; + }) + sources."signal-exit-3.0.2" + ]; + }) + sources."map-obj-1.0.1" + sources."minimist-1.2.0" + (sources."normalize-package-data-2.3.5" // { + dependencies = [ + sources."hosted-git-info-2.2.0" + (sources."is-builtin-module-1.0.0" // { + dependencies = [ + sources."builtin-modules-1.1.1" + ]; + }) + sources."semver-5.3.0" + (sources."validate-npm-package-license-3.0.1" // { + dependencies = [ + (sources."spdx-correct-1.0.2" // { + dependencies = [ + sources."spdx-license-ids-1.2.2" + ]; + }) + sources."spdx-expression-parse-1.0.4" + ]; + }) + ]; + }) + sources."object-assign-4.1.1" + (sources."redent-1.0.0" // { + dependencies = [ + sources."indent-string-2.1.0" + (sources."strip-indent-1.0.1" // { + dependencies = [ + sources."get-stdin-4.0.1" + ]; + }) + ]; + }) + sources."trim-newlines-1.0.0" + ]; + }) + (sources."npm-keyword-4.2.0" // { + dependencies = [ + sources."object-assign-4.1.1" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + (sources."registry-url-3.1.0" // { + dependencies = [ + (sources."rc-1.1.7" // { + dependencies = [ + sources."deep-extend-0.4.1" + sources."ini-1.3.4" + sources."minimist-1.2.0" + sources."strip-json-comments-2.0.1" + ]; + }) + ]; + }) + ]; + }) + (sources."opn-3.0.3" // { + dependencies = [ + sources."object-assign-4.1.1" + ]; + }) + (sources."package-json-2.4.0" // { + dependencies = [ + (sources."registry-auth-token-3.1.0" // { + dependencies = [ + (sources."rc-1.1.7" // { + dependencies = [ + sources."deep-extend-0.4.1" + sources."ini-1.3.4" + sources."minimist-1.2.0" + sources."strip-json-comments-2.0.1" + ]; + }) + ]; + }) + (sources."registry-url-3.1.0" // { + dependencies = [ + (sources."rc-1.1.7" // { + dependencies = [ + sources."deep-extend-0.4.1" + sources."ini-1.3.4" + sources."minimist-1.2.0" + sources."strip-json-comments-2.0.1" + ]; + }) + ]; + }) + sources."semver-5.3.0" + ]; + }) + (sources."parse-help-0.1.1" // { + dependencies = [ + (sources."execall-1.0.0" // { + dependencies = [ + (sources."clone-regexp-1.0.0" // { + dependencies = [ + sources."is-regexp-1.0.0" + sources."is-supported-regexp-flag-1.0.0" + ]; + }) + ]; + }) + ]; + }) + (sources."read-pkg-up-1.0.1" // { + dependencies = [ + (sources."find-up-1.1.2" // { + dependencies = [ + sources."path-exists-2.1.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + ]; + }) + (sources."read-pkg-1.1.0" // { + dependencies = [ + (sources."load-json-file-1.1.0" // { + dependencies = [ + sources."graceful-fs-4.1.11" + (sources."parse-json-2.2.0" // { + dependencies = [ + (sources."error-ex-1.3.0" // { + dependencies = [ + sources."is-arrayish-0.2.1" + ]; + }) + ]; + }) + sources."pify-2.3.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + (sources."strip-bom-2.0.0" // { + dependencies = [ + sources."is-utf8-0.2.1" + ]; + }) + ]; + }) + (sources."normalize-package-data-2.3.5" // { + dependencies = [ + sources."hosted-git-info-2.2.0" + (sources."is-builtin-module-1.0.0" // { + dependencies = [ + sources."builtin-modules-1.1.1" + ]; + }) + sources."semver-5.3.0" + (sources."validate-npm-package-license-3.0.1" // { + dependencies = [ + (sources."spdx-correct-1.0.2" // { + dependencies = [ + sources."spdx-license-ids-1.2.2" + ]; + }) + sources."spdx-expression-parse-1.0.4" + ]; + }) + ]; + }) + (sources."path-type-1.1.0" // { + dependencies = [ + sources."graceful-fs-4.1.11" + sources."pify-2.3.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + ]; + }) + ]; + }) + ]; + }) + (sources."repeating-2.0.1" // { + dependencies = [ + (sources."is-finite-1.0.2" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + ]; + }) + (sources."root-check-1.0.0" // { + dependencies = [ + (sources."downgrade-root-1.2.2" // { + dependencies = [ + sources."default-uid-1.0.0" + sources."is-root-1.0.0" + ]; + }) + (sources."sudo-block-1.2.0" // { + dependencies = [ + sources."is-docker-1.1.0" + sources."is-root-1.0.0" + ]; + }) + ]; + }) + (sources."sort-on-1.3.0" // { + dependencies = [ + sources."arrify-1.0.1" + (sources."dot-prop-2.4.0" // { + dependencies = [ + sources."is-obj-1.0.1" + ]; + }) + ]; + }) + (sources."string-length-1.0.1" // { + dependencies = [ + (sources."strip-ansi-3.0.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + ]; + }) + (sources."tabtab-1.3.2" // { + dependencies = [ + (sources."debug-2.6.1" // { + dependencies = [ + sources."ms-0.7.2" + ]; + }) + (sources."inquirer-1.2.3" // { + dependencies = [ + sources."ansi-escapes-1.4.0" + (sources."cli-cursor-1.0.2" // { + dependencies = [ + (sources."restore-cursor-1.0.1" // { + dependencies = [ + sources."exit-hook-1.1.1" + sources."onetime-1.1.0" + ]; + }) + ]; + }) + sources."cli-width-2.1.0" + (sources."external-editor-1.1.1" // { + dependencies = [ + sources."extend-3.0.0" + (sources."spawn-sync-1.0.15" // { + dependencies = [ + (sources."concat-stream-1.6.0" // { + dependencies = [ + sources."inherits-2.0.3" + sources."typedarray-0.0.6" + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + ]; + }) + sources."os-shim-0.1.3" + ]; + }) + (sources."tmp-0.0.29" // { + dependencies = [ + sources."os-tmpdir-1.0.2" + ]; + }) + ]; + }) + sources."lodash-4.17.4" + sources."mute-stream-0.0.6" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + (sources."run-async-2.3.0" // { + dependencies = [ + sources."is-promise-2.1.0" + ]; + }) + sources."rx-4.1.0" + (sources."string-width-1.0.2" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + ]; + }) + (sources."strip-ansi-3.0.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + sources."through-2.3.8" + ]; + }) + sources."minimist-1.2.0" + (sources."mkdirp-0.5.1" // { + dependencies = [ + sources."minimist-0.0.8" + ]; + }) + (sources."npmlog-2.0.4" // { + dependencies = [ + sources."ansi-0.3.1" + (sources."are-we-there-yet-1.1.2" // { + dependencies = [ + sources."delegates-1.0.0" + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."inherits-2.0.3" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + ]; + }) + (sources."gauge-1.2.7" // { + dependencies = [ + sources."has-unicode-2.0.1" + sources."lodash.pad-4.5.1" + sources."lodash.padend-4.6.1" + sources."lodash.padstart-4.6.1" + ]; + }) + ]; + }) + sources."object-assign-4.1.1" + ]; + }) + sources."titleize-1.0.0" + (sources."update-notifier-0.6.3" // { + dependencies = [ + (sources."boxen-0.3.1" // { + dependencies = [ + sources."filled-array-1.1.0" + sources."object-assign-4.1.1" + (sources."string-width-1.0.2" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + (sources."strip-ansi-3.0.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + ]; + }) + sources."widest-line-1.0.0" + ]; + }) + (sources."configstore-2.1.0" // { + dependencies = [ + (sources."dot-prop-3.0.0" // { + dependencies = [ + sources."is-obj-1.0.1" + ]; + }) + sources."graceful-fs-4.1.11" + (sources."mkdirp-0.5.1" // { + dependencies = [ + sources."minimist-0.0.8" + ]; + }) + sources."object-assign-4.1.1" + sources."os-tmpdir-1.0.2" + (sources."osenv-0.1.4" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + sources."uuid-2.0.3" + (sources."write-file-atomic-1.3.1" // { + dependencies = [ + sources."imurmurhash-0.1.4" + sources."slide-1.1.6" + ]; + }) + (sources."xdg-basedir-2.0.0" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + ]; + }) + sources."is-npm-1.0.0" + sources."latest-version-2.0.0" + (sources."semver-diff-2.1.0" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + ]; + }) + (sources."user-home-2.0.0" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + (sources."yeoman-character-1.1.0" // { + dependencies = [ + (sources."supports-color-3.2.3" // { + dependencies = [ + sources."has-flag-1.0.0" + ]; + }) + ]; + }) + (sources."yeoman-doctor-2.1.0" // { + dependencies = [ + (sources."bin-version-check-2.1.0" // { + dependencies = [ + (sources."bin-version-1.0.4" // { + dependencies = [ + (sources."find-versions-1.2.1" // { + dependencies = [ + sources."array-uniq-1.0.3" + sources."get-stdin-4.0.1" + sources."semver-regex-1.0.0" + ]; + }) + ]; + }) + sources."minimist-1.2.0" + sources."semver-4.3.6" + (sources."semver-truncate-1.1.2" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + ]; + }) + (sources."each-async-1.1.1" // { + dependencies = [ + sources."onetime-1.1.0" + sources."set-immediate-shim-1.0.1" + ]; + }) + sources."log-symbols-1.0.2" + sources."object-values-1.0.0" + sources."semver-5.3.0" + (sources."twig-0.8.9" // { + dependencies = [ + (sources."walk-2.3.9" // { + dependencies = [ + sources."foreachasync-3.0.0" + ]; + }) + (sources."minimatch-3.0.3" // { + dependencies = [ + (sources."brace-expansion-1.1.6" // { + dependencies = [ + sources."balanced-match-0.4.2" + sources."concat-map-0.0.1" + ]; + }) + ]; + }) + ]; + }) + ]; + }) + (sources."yeoman-environment-1.6.6" // { + dependencies = [ + (sources."debug-2.6.1" // { + dependencies = [ + sources."ms-0.7.2" + ]; + }) + sources."diff-2.2.3" + sources."escape-string-regexp-1.0.5" + (sources."globby-4.1.0" // { + dependencies = [ + (sources."array-union-1.0.2" // { + dependencies = [ + sources."array-uniq-1.0.3" + ]; + }) + sources."arrify-1.0.1" + (sources."glob-6.0.4" // { + dependencies = [ + (sources."inflight-1.0.6" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + sources."inherits-2.0.3" + (sources."minimatch-3.0.3" // { + dependencies = [ + (sources."brace-expansion-1.1.6" // { + dependencies = [ + sources."balanced-match-0.4.2" + sources."concat-map-0.0.1" + ]; + }) + ]; + }) + (sources."once-1.4.0" // { + dependencies = [ + sources."wrappy-1.0.2" + ]; + }) + sources."path-is-absolute-1.0.1" + ]; + }) + sources."object-assign-4.1.1" + sources."pify-2.3.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + ]; + }) + sources."grouped-queue-0.3.3" + (sources."inquirer-1.2.3" // { + dependencies = [ + sources."ansi-escapes-1.4.0" + (sources."cli-cursor-1.0.2" // { + dependencies = [ + (sources."restore-cursor-1.0.1" // { + dependencies = [ + sources."exit-hook-1.1.1" + sources."onetime-1.1.0" + ]; + }) + ]; + }) + sources."cli-width-2.1.0" + (sources."external-editor-1.1.1" // { + dependencies = [ + sources."extend-3.0.0" + (sources."spawn-sync-1.0.15" // { + dependencies = [ + (sources."concat-stream-1.6.0" // { + dependencies = [ + sources."inherits-2.0.3" + sources."typedarray-0.0.6" + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + ]; + }) + sources."os-shim-0.1.3" + ]; + }) + (sources."tmp-0.0.29" // { + dependencies = [ + sources."os-tmpdir-1.0.2" + ]; + }) + ]; + }) + sources."mute-stream-0.0.6" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + (sources."run-async-2.3.0" // { + dependencies = [ + sources."is-promise-2.1.0" + ]; + }) + sources."rx-4.1.0" + (sources."string-width-1.0.2" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + ]; + }) + (sources."strip-ansi-3.0.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + ]; + }) + sources."through-2.3.8" + ]; + }) + sources."lodash-4.17.4" + sources."log-symbols-1.0.2" + (sources."mem-fs-1.1.3" // { + dependencies = [ + (sources."through2-2.0.3" // { + dependencies = [ + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."inherits-2.0.3" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + sources."xtend-4.0.1" + ]; + }) + (sources."vinyl-1.2.0" // { + dependencies = [ + sources."clone-1.0.2" + sources."clone-stats-0.0.1" + sources."replace-ext-0.0.1" + ]; + }) + (sources."vinyl-file-2.0.0" // { + dependencies = [ + sources."graceful-fs-4.1.11" + sources."pify-2.3.0" + (sources."pinkie-promise-2.0.1" // { + dependencies = [ + sources."pinkie-2.0.4" + ]; + }) + (sources."strip-bom-2.0.0" // { + dependencies = [ + sources."is-utf8-0.2.1" + ]; + }) + (sources."strip-bom-stream-2.0.0" // { + dependencies = [ + (sources."first-chunk-stream-2.0.0" // { + dependencies = [ + (sources."readable-stream-2.2.3" // { + dependencies = [ + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."inherits-2.0.3" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + ]; + }) + ]; + }) + ]; + }) + ]; + }) + ]; + }) + sources."text-table-0.2.0" + (sources."untildify-2.1.0" // { + dependencies = [ + sources."os-homedir-1.0.2" + ]; + }) + ]; + }) + (sources."yosay-1.2.1" // { + dependencies = [ + sources."ansi-regex-2.1.1" + sources."ansi-styles-2.2.1" + sources."cli-boxes-1.0.0" + sources."pad-component-0.0.1" + (sources."string-width-1.0.2" // { + dependencies = [ + sources."code-point-at-1.1.0" + (sources."is-fullwidth-code-point-1.0.0" // { + dependencies = [ + sources."number-is-nan-1.0.1" + ]; + }) + ]; + }) + sources."strip-ansi-3.0.1" + (sources."taketalk-1.0.0" // { + dependencies = [ + sources."get-stdin-4.0.1" + sources."minimist-1.2.0" + ]; + }) + sources."wrap-ansi-2.1.0" + ]; + }) + ]; + buildInputs = globalBuildInputs; + meta = { + description = "CLI tool for running Yeoman generators"; + homepage = http://yeoman.io/; + license = "BSD-2-Clause"; + }; + production = true; + }; } \ No newline at end of file diff --git a/pkgs/development/node-packages/node-packages-v6.nix b/pkgs/development/node-packages/node-packages-v6.nix index fd7a6ed52fc..dba0e9d82c2 100644 --- a/pkgs/development/node-packages/node-packages-v6.nix +++ b/pkgs/development/node-packages/node-packages-v6.nix @@ -67,22 +67,22 @@ let sha1 = "3cf436dcc9f3477ef3d7fa55a5bdf6d893f1c6c6"; }; }; - "uglify-js-2.4.15" = { + "uglify-js-2.6.1" = { name = "uglify-js"; packageName = "uglify-js"; - version = "2.4.15"; + version = "2.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.4.15.tgz"; - sha1 = "12bc6d84345fbc306e13f7075d6437a8bf64d7e3"; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.6.1.tgz"; + sha1 = "edbbe1888ba3525ded3a7bf836b30b3405d3161b"; }; }; - "resolve-1.2.0" = { + "resolve-1.3.2" = { name = "resolve"; packageName = "resolve"; - version = "1.2.0"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/resolve/-/resolve-1.2.0.tgz"; - sha1 = "9589c3f2f6149d1417a40becc1663db6ec6bc26c"; + url = "https://registry.npmjs.org/resolve/-/resolve-1.3.2.tgz"; + sha1 = "1f0442c9e0cbb8136e87b9305f932f46c7f28235"; }; }; "global-paths-0.1.2" = { @@ -112,13 +112,13 @@ let sha1 = "d76a310d6b8a7ba9e4825bb3d43f5427e9fe8f6e"; }; }; - "moment-2.10.6" = { + "moment-2.17.1" = { name = "moment"; packageName = "moment"; - version = "2.10.6"; + version = "2.17.1"; src = fetchurl { - url = "https://registry.npmjs.org/moment/-/moment-2.10.6.tgz"; - sha1 = "6cb21967c79cba7b0ca5e66644f173662b3efa77"; + url = "https://registry.npmjs.org/moment/-/moment-2.17.1.tgz"; + sha1 = "fed9506063f36b10f066c8b59a144d7faebe1d82"; }; }; "node.extend-1.0.10" = { @@ -202,22 +202,13 @@ let sha1 = "b6bbe0b0674b9d719708ca38de8c237cb526c3d1"; }; }; - "source-map-0.1.34" = { + "source-map-0.5.6" = { name = "source-map"; packageName = "source-map"; - version = "0.1.34"; + version = "0.5.6"; src = fetchurl { - url = "https://registry.npmjs.org/source-map/-/source-map-0.1.34.tgz"; - sha1 = "a7cfe89aec7b1682c3b198d0acfb47d7d090566b"; - }; - }; - "optimist-0.3.7" = { - name = "optimist"; - packageName = "optimist"; - version = "0.3.7"; - src = fetchurl { - url = "https://registry.npmjs.org/optimist/-/optimist-0.3.7.tgz"; - sha1 = "c90941ad59e4273328923074d2cf2e7cbc6ec0d9"; + url = "https://registry.npmjs.org/source-map/-/source-map-0.5.6.tgz"; + sha1 = "75ce38f52bf0733c5a7f0c118d81334a2bb5f412"; }; }; "uglify-to-browserify-1.0.2" = { @@ -229,22 +220,139 @@ let sha1 = "6e0924d6bda6b5afe349e39a6d632850a0f882b7"; }; }; - "amdefine-1.0.1" = { - name = "amdefine"; - packageName = "amdefine"; - version = "1.0.1"; + "yargs-3.10.0" = { + name = "yargs"; + packageName = "yargs"; + version = "3.10.0"; src = fetchurl { - url = "https://registry.npmjs.org/amdefine/-/amdefine-1.0.1.tgz"; - sha1 = "4a5282ac164729e93619bcfd3ad151f817ce91f5"; + url = "https://registry.npmjs.org/yargs/-/yargs-3.10.0.tgz"; + sha1 = "f7ee7bd857dd7c1d2d38c0e74efbd681d1431fd1"; }; }; - "wordwrap-0.0.3" = { + "camelcase-1.2.1" = { + name = "camelcase"; + packageName = "camelcase"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/camelcase/-/camelcase-1.2.1.tgz"; + sha1 = "9bb5304d2e0b56698b2c758b08a3eaa9daa58a39"; + }; + }; + "cliui-2.1.0" = { + name = "cliui"; + packageName = "cliui"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/cliui/-/cliui-2.1.0.tgz"; + sha1 = "4b475760ff80264c762c3a1719032e91c7fea0d1"; + }; + }; + "decamelize-1.2.0" = { + name = "decamelize"; + packageName = "decamelize"; + version = "1.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/decamelize/-/decamelize-1.2.0.tgz"; + sha1 = "f6534d15148269b20352e7bee26f501f9a191290"; + }; + }; + "window-size-0.1.0" = { + name = "window-size"; + packageName = "window-size"; + version = "0.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/window-size/-/window-size-0.1.0.tgz"; + sha1 = "5438cd2ea93b202efa3a19fe8887aee7c94f9c9d"; + }; + }; + "center-align-0.1.3" = { + name = "center-align"; + packageName = "center-align"; + version = "0.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/center-align/-/center-align-0.1.3.tgz"; + sha1 = "aa0d32629b6ee972200411cbd4461c907bc2b7ad"; + }; + }; + "right-align-0.1.3" = { + name = "right-align"; + packageName = "right-align"; + version = "0.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/right-align/-/right-align-0.1.3.tgz"; + sha1 = "61339b722fe6a3515689210d24e14c96148613ef"; + }; + }; + "wordwrap-0.0.2" = { name = "wordwrap"; packageName = "wordwrap"; - version = "0.0.3"; + version = "0.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.3.tgz"; - sha1 = "a3d5da6cd5c0bc0008d37234bbaf1bed63059107"; + url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.2.tgz"; + sha1 = "b79669bb42ecb409f83d583cad52ca17eaa1643f"; + }; + }; + "align-text-0.1.4" = { + name = "align-text"; + packageName = "align-text"; + version = "0.1.4"; + src = fetchurl { + url = "https://registry.npmjs.org/align-text/-/align-text-0.1.4.tgz"; + sha1 = "0cd90a561093f35d0a99256c22b7069433fad117"; + }; + }; + "lazy-cache-1.0.4" = { + name = "lazy-cache"; + packageName = "lazy-cache"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/lazy-cache/-/lazy-cache-1.0.4.tgz"; + sha1 = "a1d78fc3a50474cb80845d3b3b6e1da49a446e8e"; + }; + }; + "kind-of-3.1.0" = { + name = "kind-of"; + packageName = "kind-of"; + version = "3.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/kind-of/-/kind-of-3.1.0.tgz"; + sha1 = "475d698a5e49ff5e53d14e3e732429dc8bf4cf47"; + }; + }; + "longest-1.0.1" = { + name = "longest"; + packageName = "longest"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/longest/-/longest-1.0.1.tgz"; + sha1 = "30a0b2da38f73770e8294a0d22e6625ed77d0097"; + }; + }; + "repeat-string-1.6.1" = { + name = "repeat-string"; + packageName = "repeat-string"; + version = "1.6.1"; + src = fetchurl { + url = "https://registry.npmjs.org/repeat-string/-/repeat-string-1.6.1.tgz"; + sha1 = "8dcae470e1c88abc2d600fff4a776286da75e637"; + }; + }; + "is-buffer-1.1.4" = { + name = "is-buffer"; + packageName = "is-buffer"; + version = "1.1.4"; + src = fetchurl { + url = "https://registry.npmjs.org/is-buffer/-/is-buffer-1.1.4.tgz"; + sha1 = "cfc86ccd5dc5a52fa80489111c6920c457e2d98b"; + }; + }; + "path-parse-1.0.5" = { + name = "path-parse"; + packageName = "path-parse"; + version = "1.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/path-parse/-/path-parse-1.0.5.tgz"; + sha1 = "3c1adf871ea9cd6c9431b6ea2bd74a0ff055c4c1"; }; }; "array-unique-0.2.1" = { @@ -337,6 +445,15 @@ let sha1 = "36f3e22e60750920f5e7241a476a8c6a42275ad0"; }; }; + "amdefine-1.0.1" = { + name = "amdefine"; + packageName = "amdefine"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/amdefine/-/amdefine-1.0.1.tgz"; + sha1 = "4a5282ac164729e93619bcfd3ad151f817ce91f5"; + }; + }; "xml2js-0.2.8" = { name = "xml2js"; packageName = "xml2js"; @@ -490,13 +607,13 @@ let sha1 = "937f87a8aeceb641a8210a9ba837323f0206eb47"; }; }; - "azure-arm-network-0.17.0" = { + "azure-arm-network-0.18.0" = { name = "azure-arm-network"; packageName = "azure-arm-network"; - version = "0.17.0"; + version = "0.18.0"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-network/-/azure-arm-network-0.17.0.tgz"; - sha1 = "97371f42301b40d56757f340c0dd0ed34984cdd6"; + url = "https://registry.npmjs.org/azure-arm-network/-/azure-arm-network-0.18.0.tgz"; + sha1 = "0ebfe1adbdfdc535d6c95e3713a5c54b5144932f"; }; }; "azure-arm-powerbiembedded-0.1.0" = { @@ -643,13 +760,13 @@ let sha1 = "aa9a49fb9081a210f2f4cc6596ca4653b68306e6"; }; }; - "azure-arm-storage-0.13.1-preview" = { + "azure-arm-storage-0.15.0-preview" = { name = "azure-arm-storage"; packageName = "azure-arm-storage"; - version = "0.13.1-preview"; + version = "0.15.0-preview"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-storage/-/azure-arm-storage-0.13.1-preview.tgz"; - sha1 = "9342515a44e632c48f1d0d9c7a98214ed563d8f7"; + url = "https://registry.npmjs.org/azure-arm-storage/-/azure-arm-storage-0.15.0-preview.tgz"; + sha1 = "e25c13a1e716656caa019a7bc9fabe05c5062b7e"; }; }; "azure-asm-sb-0.10.1" = { @@ -697,13 +814,13 @@ let sha1 = "bfd0c01a8ae6afd90eaa13360976242e28459650"; }; }; - "azure-storage-1.3.0" = { + "azure-storage-2.0.0" = { name = "azure-storage"; packageName = "azure-storage"; - version = "1.3.0"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/azure-storage/-/azure-storage-1.3.0.tgz"; - sha1 = "314c66699211cd065bb4f7ec98f27b2e533b48ce"; + url = "https://registry.npmjs.org/azure-storage/-/azure-storage-2.0.0.tgz"; + sha1 = "581ed1245ee105e818806efd5cc5cc4c14eab7c0"; }; }; "azure-arm-batch-0.3.0" = { @@ -850,40 +967,31 @@ let sha1 = "bd0a7040d426d7598d6c742ec8f875d0e88644a9"; }; }; - "kuduscript-1.0.9" = { + "kuduscript-1.0.13" = { name = "kuduscript"; packageName = "kuduscript"; - version = "1.0.9"; + version = "1.0.13"; src = fetchurl { - url = "https://registry.npmjs.org/kuduscript/-/kuduscript-1.0.9.tgz"; - sha1 = "28e039af12be00c4d1d890dc243afcfe2b25298a"; + url = "https://registry.npmjs.org/kuduscript/-/kuduscript-1.0.13.tgz"; + sha1 = "c74349b2092608bb0f3dc827c516ef2fddb8238e"; }; }; - "moment-2.17.1" = { - name = "moment"; - packageName = "moment"; - version = "2.17.1"; - src = fetchurl { - url = "https://registry.npmjs.org/moment/-/moment-2.17.1.tgz"; - sha1 = "fed9506063f36b10f066c8b59a144d7faebe1d82"; - }; - }; - "ms-rest-1.15.4" = { + "ms-rest-1.15.5" = { name = "ms-rest"; packageName = "ms-rest"; - version = "1.15.4"; + version = "1.15.5"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest/-/ms-rest-1.15.4.tgz"; - sha1 = "7af7038fe843fd89d407fec346320db6b010ef8c"; + url = "https://registry.npmjs.org/ms-rest/-/ms-rest-1.15.5.tgz"; + sha1 = "b207a9c447f7fca3adca701feccc2c1907b1431d"; }; }; - "ms-rest-azure-1.15.4" = { + "ms-rest-azure-1.15.5" = { name = "ms-rest-azure"; packageName = "ms-rest-azure"; - version = "1.15.4"; + version = "1.15.5"; src = fetchurl { - url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-1.15.4.tgz"; - sha1 = "ea89bce23c6ddd4593db1e86f6557cc6374e3492"; + url = "https://registry.npmjs.org/ms-rest-azure/-/ms-rest-azure-1.15.5.tgz"; + sha1 = "8fbb1366ecca18ce59010473dc0228b5a32c5611"; }; }; "node-forge-0.6.23" = { @@ -895,13 +1003,13 @@ let sha1 = "f03cf65ebd5d4d9dd2f7becb57ceaf78ed94a2bf"; }; }; - "omelette-0.1.0" = { + "omelette-0.3.2" = { name = "omelette"; packageName = "omelette"; - version = "0.1.0"; + version = "0.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/omelette/-/omelette-0.1.0.tgz"; - sha1 = "31cc7eb472a513c07483d24d3e1bf164cb0d23b8"; + url = "https://registry.npmjs.org/omelette/-/omelette-0.3.2.tgz"; + sha1 = "68c1b3c57ced778b4e67d8637d2559b2c1b3ec26"; }; }; "openssl-wrapper-0.2.1" = { @@ -1048,15 +1156,6 @@ let sha1 = "3c9349d196207fd1bdff9d4bc43ef72510e3a12e"; }; }; - "wordwrap-0.0.2" = { - name = "wordwrap"; - packageName = "wordwrap"; - version = "0.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.2.tgz"; - sha1 = "b79669bb42ecb409f83d583cad52ca17eaa1643f"; - }; - }; "xml2js-0.1.14" = { name = "xml2js"; packageName = "xml2js"; @@ -1246,15 +1345,6 @@ let sha1 = "b35b27c47e57ed2ddc70053d6b07becdb291741c"; }; }; - "extend-1.2.1" = { - name = "extend"; - packageName = "extend"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/extend/-/extend-1.2.1.tgz"; - sha1 = "a0f5fd6cfc83a5fe49ef698d60ec8a624dd4576c"; - }; - }; "browserify-mime-1.2.9" = { name = "browserify-mime"; packageName = "browserify-mime"; @@ -1264,6 +1354,15 @@ let sha1 = "aeb1af28de6c0d7a6a2ce40adb68ff18422af31f"; }; }; + "extend-1.2.1" = { + name = "extend"; + packageName = "extend"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/extend/-/extend-1.2.1.tgz"; + sha1 = "a0f5fd6cfc83a5fe49ef698d60ec8a624dd4576c"; + }; + }; "json-edm-parser-0.1.2" = { name = "json-edm-parser"; packageName = "json-edm-parser"; @@ -1273,6 +1372,15 @@ let sha1 = "1e60b0fef1bc0af67bc0d146dfdde5486cd615b4"; }; }; + "md5.js-1.3.4" = { + name = "md5.js"; + packageName = "md5.js"; + version = "1.3.4"; + src = fetchurl { + url = "https://registry.npmjs.org/md5.js/-/md5.js-1.3.4.tgz"; + sha1 = "e9bdbde94a20a5ac18b04340fc5764d5b09d901d"; + }; + }; "readable-stream-2.0.6" = { name = "readable-stream"; packageName = "readable-stream"; @@ -1291,13 +1399,13 @@ let sha1 = "5c0c5685107160e72fe7489bddea0b44c2bc67bd"; }; }; - "core-util-is-1.0.2" = { - name = "core-util-is"; - packageName = "core-util-is"; - version = "1.0.2"; + "hash-base-3.0.3" = { + name = "hash-base"; + packageName = "hash-base"; + version = "3.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/core-util-is/-/core-util-is-1.0.2.tgz"; - sha1 = "b5fd54220aa2bc5ab57aab7140c940754503c1a7"; + url = "https://registry.npmjs.org/hash-base/-/hash-base-3.0.3.tgz"; + sha1 = "87ec48734bfe354275535150b14821566b083807"; }; }; "inherits-2.0.3" = { @@ -1309,6 +1417,15 @@ let sha1 = "633c2c83e3da42a502f52466022480f4208261de"; }; }; + "core-util-is-1.0.2" = { + name = "core-util-is"; + packageName = "core-util-is"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/core-util-is/-/core-util-is-1.0.2.tgz"; + sha1 = "b5fd54220aa2bc5ab57aab7140c940754503c1a7"; + }; + }; "isarray-1.0.0" = { name = "isarray"; packageName = "isarray"; @@ -1525,13 +1642,13 @@ let sha1 = "abcc6cbd3ec2ed2a729ff6e7c1fa8f01784a8574"; }; }; - "rimraf-2.5.4" = { + "rimraf-2.6.1" = { name = "rimraf"; packageName = "rimraf"; - version = "2.5.4"; + version = "2.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/rimraf/-/rimraf-2.5.4.tgz"; - sha1 = "96800093cbf1a0c86bd95b4625467535c29dfa04"; + url = "https://registry.npmjs.org/rimraf/-/rimraf-2.6.1.tgz"; + sha1 = "c2338ec643df7a1b7fe5c54fa86f57428a55f33d"; }; }; "minimist-0.0.8" = { @@ -1813,13 +1930,13 @@ let sha1 = "46a6ab7f0aead8deae9ec0565780b7d4efeb9d43"; }; }; - "qs-6.2.1" = { + "qs-6.2.2" = { name = "qs"; packageName = "qs"; - version = "6.2.1"; + version = "6.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.2.1.tgz"; - sha1 = "ce03c5ff0935bc1d9d69a9f14cbd18e568d67625"; + url = "https://registry.npmjs.org/qs/-/qs-6.2.2.tgz"; + sha1 = "d506a5ad5b2cae1fd35c4f54ec182e267e3ef586"; }; }; "stringstream-0.0.5" = { @@ -1858,13 +1975,13 @@ let sha1 = "df3ae199acadfb7d440aaae0b29e2272b24ec619"; }; }; - "async-2.1.4" = { + "async-2.1.5" = { name = "async"; packageName = "async"; - version = "2.1.4"; + version = "2.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/async/-/async-2.1.4.tgz"; - sha1 = "2d2160c7788032e4dd6cbe2502f1f9a2c8f6cde4"; + url = "https://registry.npmjs.org/async/-/async-2.1.5.tgz"; + sha1 = "e587c68580994ac67fc56ff86d3ac56bdbe810bc"; }; }; "lodash-4.17.4" = { @@ -1894,13 +2011,13 @@ let sha1 = "9c99094176e12240cb22d6c5146098400fe0f7d4"; }; }; - "is-my-json-valid-2.15.0" = { + "is-my-json-valid-2.16.0" = { name = "is-my-json-valid"; packageName = "is-my-json-valid"; - version = "2.15.0"; + version = "2.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.15.0.tgz"; - sha1 = "936edda3ca3c211fd98f3b2d3e08da43f7b2915b"; + url = "https://registry.npmjs.org/is-my-json-valid/-/is-my-json-valid-2.16.0.tgz"; + sha1 = "f079dd9bfdae65ee2038aae8acbc86ab109e3693"; }; }; "pinkie-promise-2.0.1" = { @@ -2299,13 +2416,13 @@ let sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; }; - "readable-stream-2.2.2" = { + "readable-stream-2.2.3" = { name = "readable-stream"; packageName = "readable-stream"; - version = "2.2.2"; + version = "2.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.2.2.tgz"; - sha1 = "a9e6fec3c7dda85f8bb1b3ba7028604556fc825e"; + url = "https://registry.npmjs.org/readable-stream/-/readable-stream-2.2.3.tgz"; + sha1 = "9cf49463985df016c8ae8813097a9293a9b33729"; }; }; "buffer-shims-1.0.0" = { @@ -2695,15 +2812,6 @@ let sha1 = "308beeaffdf28119051efa1d932213c91b8f92e7"; }; }; - "decamelize-1.2.0" = { - name = "decamelize"; - packageName = "decamelize"; - version = "1.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/decamelize/-/decamelize-1.2.0.tgz"; - sha1 = "f6534d15148269b20352e7bee26f501f9a191290"; - }; - }; "loud-rejection-1.6.0" = { name = "loud-rejection"; packageName = "loud-rejection"; @@ -3127,13 +3235,13 @@ let sha1 = "e439be2aaee327321952730f99a8929e4fc50582"; }; }; - "JSONStream-1.3.0" = { + "JSONStream-1.3.1" = { name = "JSONStream"; packageName = "JSONStream"; - version = "1.3.0"; + version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.0.tgz"; - sha1 = "680ab9ac6572a8a1a207e0b38721db1c77b215e5"; + url = "https://registry.npmjs.org/JSONStream/-/JSONStream-1.3.1.tgz"; + sha1 = "707f761e01dae9e16f1bcf93703b78c70966579a"; }; }; "assert-1.4.1" = { @@ -3181,13 +3289,13 @@ let sha1 = "35c9393244a90aff83581063d16f0882cecc9418"; }; }; - "cached-path-relative-1.0.0" = { + "cached-path-relative-1.0.1" = { name = "cached-path-relative"; packageName = "cached-path-relative"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/cached-path-relative/-/cached-path-relative-1.0.0.tgz"; - sha1 = "d1094c577fbd9a8b8bd43c96af6188aa205d05f4"; + url = "https://registry.npmjs.org/cached-path-relative/-/cached-path-relative-1.0.1.tgz"; + sha1 = "d09c4b52800aa4c078e2dd81a869aac90d2e54e7"; }; }; "concat-stream-1.5.2" = { @@ -3316,13 +3424,13 @@ let sha1 = "a52e1d138024c00b86b1c0c91f677918b8ae0a59"; }; }; - "module-deps-4.0.8" = { + "module-deps-4.1.1" = { name = "module-deps"; packageName = "module-deps"; - version = "4.0.8"; + version = "4.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/module-deps/-/module-deps-4.0.8.tgz"; - sha1 = "55fd70623399706c3288bef7a609ff1e8c0ed2bb"; + url = "https://registry.npmjs.org/module-deps/-/module-deps-4.1.1.tgz"; + sha1 = "23215833f1da13fd606ccb8087b44852dcb821fd"; }; }; "os-browserify-0.1.2" = { @@ -3550,15 +3658,6 @@ let sha1 = "2dcbd2c287cbc0a55cc42328bd0c736150d53e3f"; }; }; - "source-map-0.5.6" = { - name = "source-map"; - packageName = "source-map"; - version = "0.5.6"; - src = fetchurl { - url = "https://registry.npmjs.org/source-map/-/source-map-0.5.6.tgz"; - sha1 = "75ce38f52bf0733c5a7f0c118d81334a2bb5f412"; - }; - }; "resolve-1.1.7" = { name = "resolve"; packageName = "resolve"; @@ -3766,13 +3865,13 @@ let sha1 = "21e0abfaf6f2029cf2fafb133567a701d4135524"; }; }; - "elliptic-6.3.3" = { + "elliptic-6.4.0" = { name = "elliptic"; packageName = "elliptic"; - version = "6.3.3"; + version = "6.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/elliptic/-/elliptic-6.3.3.tgz"; - sha1 = "5482d9646d54bcb89fd7d994fc9e2e9568876e3f"; + url = "https://registry.npmjs.org/elliptic/-/elliptic-6.4.0.tgz"; + sha1 = "cac9af8762c85836187003c8dfe193e5e2eae5df"; }; }; "parse-asn1-5.0.0" = { @@ -3784,13 +3883,13 @@ let sha1 = "35060f6d5015d37628c770f4e091a0b5a278bc23"; }; }; - "brorand-1.0.7" = { + "brorand-1.1.0" = { name = "brorand"; packageName = "brorand"; - version = "1.0.7"; + version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/brorand/-/brorand-1.0.7.tgz"; - sha1 = "6677fa5e4901bdbf9c9ec2a748e28dca407a9bfc"; + url = "https://registry.npmjs.org/brorand/-/brorand-1.1.0.tgz"; + sha1 = "12c25efe40a45e3c323eb8675a0a0ce57b22371f"; }; }; "hash.js-1.0.3" = { @@ -3802,6 +3901,24 @@ let sha1 = "1332ff00156c0a0ffdd8236013d07b77a0451573"; }; }; + "hmac-drbg-1.0.0" = { + name = "hmac-drbg"; + packageName = "hmac-drbg"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/hmac-drbg/-/hmac-drbg-1.0.0.tgz"; + sha1 = "3db471f45aae4a994a0688322171f51b8b91bee5"; + }; + }; + "minimalistic-crypto-utils-1.0.1" = { + name = "minimalistic-crypto-utils"; + packageName = "minimalistic-crypto-utils"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/minimalistic-crypto-utils/-/minimalistic-crypto-utils-1.0.1.tgz"; + sha1 = "f6c00c1c0b082246e5c4d99dfb8c7c083b2b582a"; + }; + }; "asn1.js-4.9.1" = { name = "asn1.js"; packageName = "asn1.js"; @@ -3847,15 +3964,6 @@ let sha1 = "16176714c801798e4e8f2cf7f7529467bb4a5771"; }; }; - "is-buffer-1.1.4" = { - name = "is-buffer"; - packageName = "is-buffer"; - version = "1.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/is-buffer/-/is-buffer-1.1.4.tgz"; - sha1 = "cfc86ccd5dc5a52fa80489111c6920c457e2d98b"; - }; - }; "lexical-scope-1.2.0" = { name = "lexical-scope"; packageName = "lexical-scope"; @@ -4666,6 +4774,15 @@ let sha1 = "a9219960a6d5d5d046597aee51252c6655f7177e"; }; }; + "wordwrap-0.0.3" = { + name = "wordwrap"; + packageName = "wordwrap"; + version = "0.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/wordwrap/-/wordwrap-0.0.3.tgz"; + sha1 = "a3d5da6cd5c0bc0008d37234bbaf1bed63059107"; + }; + }; "minimist-0.0.10" = { name = "minimist"; packageName = "minimist"; @@ -5197,22 +5314,22 @@ let sha1 = "89a73ddc5e75c9ef8ab6320c0a1600d6a41179b9"; }; }; - "simple-peer-6.2.2" = { + "simple-peer-6.4.3" = { name = "simple-peer"; packageName = "simple-peer"; - version = "6.2.2"; + version = "6.4.3"; src = fetchurl { - url = "https://registry.npmjs.org/simple-peer/-/simple-peer-6.2.2.tgz"; - sha1 = "9ea1a6e2c2e3656d04eac2a7b612e148f0d370ba"; + url = "https://registry.npmjs.org/simple-peer/-/simple-peer-6.4.3.tgz"; + sha1 = "f487b381e0fe0874bff1020026001bbf4579c20a"; }; }; - "simple-websocket-4.3.0" = { + "simple-websocket-4.3.1" = { name = "simple-websocket"; packageName = "simple-websocket"; - version = "4.3.0"; + version = "4.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/simple-websocket/-/simple-websocket-4.3.0.tgz"; - sha1 = "062990cc94709388c31fc978dfc2a790b1b3e6ea"; + url = "https://registry.npmjs.org/simple-websocket/-/simple-websocket-4.3.1.tgz"; + sha1 = "5d3d5751bb39aeba2f710d8eec78768df821f38d"; }; }; "string2compact-1.2.2" = { @@ -5224,13 +5341,13 @@ let sha1 = "420b3a9ee1c46854919b4a2aeac65c43fa50597b"; }; }; - "ws-1.1.1" = { + "ws-1.1.2" = { name = "ws"; packageName = "ws"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-1.1.1.tgz"; - sha1 = "082ddb6c641e85d4bb451f03d52f06eabdb1f018"; + url = "https://registry.npmjs.org/ws/-/ws-1.1.2.tgz"; + sha1 = "8a244fa052401e08c9886cf44a85189e1fd4067f"; }; }; "ipaddr.js-1.2.0" = { @@ -5251,13 +5368,13 @@ let sha1 = "bbcd40c8451a7ed4ef5c373b8169a409dd1d11d9"; }; }; - "ws-2.0.3" = { + "ws-2.1.0" = { name = "ws"; packageName = "ws"; - version = "2.0.3"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-2.0.3.tgz"; - sha1 = "532fd499c3f7d7d720e543f1f807106cfc57d9cb"; + url = "https://registry.npmjs.org/ws/-/ws-2.1.0.tgz"; + sha1 = "b24eaed9609f8632dd51e3f7698619a90fddcc92"; }; }; "ultron-1.1.0" = { @@ -6484,6 +6601,15 @@ let sha1 = "355219cd6cf18dbe7c01cc7fd2dce765cfdc549a"; }; }; + "abbrev-1.1.0" = { + name = "abbrev"; + packageName = "abbrev"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/abbrev/-/abbrev-1.1.0.tgz"; + sha1 = "d0554c2256636e2f56e7c2e5ad183f859428d81f"; + }; + }; "abbrev-1.0.9" = { name = "abbrev"; packageName = "abbrev"; @@ -6817,6 +6943,15 @@ let sha1 = "e76388d217992c252750241d3d3956fed98d8ff4"; }; }; + "rimraf-2.5.4" = { + name = "rimraf"; + packageName = "rimraf"; + version = "2.5.4"; + src = fetchurl { + url = "https://registry.npmjs.org/rimraf/-/rimraf-2.5.4.tgz"; + sha1 = "96800093cbf1a0c86bd95b4625467535c29dfa04"; + }; + }; "sha-2.0.1" = { name = "sha"; packageName = "sha"; @@ -7042,13 +7177,13 @@ let sha1 = "89c3534008b97eada4cbb157d58f6f5df025eae4"; }; }; - "qs-6.3.0" = { + "qs-6.3.1" = { name = "qs"; packageName = "qs"; - version = "6.3.0"; + version = "6.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.3.0.tgz"; - sha1 = "f403b264f23bc01228c74131b407f18d5ea5d442"; + url = "https://registry.npmjs.org/qs/-/qs-6.3.1.tgz"; + sha1 = "918c0b3bcd36679772baf135b1acb4c1651ed79d"; }; }; "asynckit-0.4.0" = { @@ -7636,22 +7771,22 @@ let sha1 = "35c3e177f2078ef789ee4bfafa4373074eaef4fa"; }; }; - "rc-1.1.6" = { + "rc-1.1.7" = { name = "rc"; packageName = "rc"; - version = "1.1.6"; + version = "1.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/rc/-/rc-1.1.6.tgz"; - sha1 = "43651b76b6ae53b5c802f1151fa3fc3b059969c9"; + url = "https://registry.npmjs.org/rc/-/rc-1.1.7.tgz"; + sha1 = "c5ea564bb07aff9fd3a5b32e906c1d3a65940fea"; }; }; - "strip-json-comments-1.0.4" = { + "strip-json-comments-2.0.1" = { name = "strip-json-comments"; packageName = "strip-json-comments"; - version = "1.0.4"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-1.0.4.tgz"; - sha1 = "1e15fbcac97d3ee99bf2d73b4c656b082bbafb91"; + url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-2.0.1.tgz"; + sha1 = "3c531942e908c2697c0ec344858c286c7ca0a60a"; }; }; "clone-2.1.0" = { @@ -9071,22 +9206,22 @@ let sha1 = "c392990c3e684783d838b8c84a45d8a048458361"; }; }; - "globals-9.14.0" = { + "globals-9.16.0" = { name = "globals"; packageName = "globals"; - version = "9.14.0"; + version = "9.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/globals/-/globals-9.14.0.tgz"; - sha1 = "8859936af0038741263053b39d0e76ca241e4034"; + url = "https://registry.npmjs.org/globals/-/globals-9.16.0.tgz"; + sha1 = "63e903658171ec2d9f51b1d31de5e2b8dc01fb80"; }; }; - "ignore-3.2.2" = { + "ignore-3.2.4" = { name = "ignore"; packageName = "ignore"; - version = "3.2.2"; + version = "3.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/ignore/-/ignore-3.2.2.tgz"; - sha1 = "1c51e1ef53bab6ddc15db4d9ac4ec139eceb3410"; + url = "https://registry.npmjs.org/ignore/-/ignore-3.2.4.tgz"; + sha1 = "4055e03596729a8fabe45a43c100ad5ed815c4e8"; }; }; "inquirer-0.12.0" = { @@ -9179,15 +9314,6 @@ let sha1 = "2334c18e9c759f7bdd56fdef7e9ae3d588e68ed3"; }; }; - "strip-json-comments-2.0.1" = { - name = "strip-json-comments"; - packageName = "strip-json-comments"; - version = "2.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-2.0.1.tgz"; - sha1 = "3c531942e908c2697c0ec344858c286c7ca0a60a"; - }; - }; "table-3.8.3" = { name = "table"; packageName = "table"; @@ -9764,13 +9890,13 @@ let sha1 = "4ed0ad060df3073300c48440373f72d1cc642d78"; }; }; - "fsevents-1.0.17" = { + "fsevents-1.1.1" = { name = "fsevents"; packageName = "fsevents"; - version = "1.0.17"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/fsevents/-/fsevents-1.0.17.tgz"; - sha1 = "8537f3f12272678765b4fd6528c0f1f66f8f4558"; + url = "https://registry.npmjs.org/fsevents/-/fsevents-1.1.1.tgz"; + sha1 = "f19fd28f43eeaf761680e519a203c4d0b3d31aff"; }; }; "micromatch-2.3.11" = { @@ -9836,15 +9962,6 @@ let sha1 = "ac468177c4943405a092fc8f29760c6ffc6206c0"; }; }; - "kind-of-3.1.0" = { - name = "kind-of"; - packageName = "kind-of"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/kind-of/-/kind-of-3.1.0.tgz"; - sha1 = "475d698a5e49ff5e53d14e3e732429dc8bf4cf47"; - }; - }; "normalize-path-2.0.1" = { name = "normalize-path"; packageName = "normalize-path"; @@ -9953,15 +10070,6 @@ let sha1 = "110dcabff397e9dcff7c0789ccc0a49adf1ec5bb"; }; }; - "repeat-string-1.6.1" = { - name = "repeat-string"; - packageName = "repeat-string"; - version = "1.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/repeat-string/-/repeat-string-1.6.1.tgz"; - sha1 = "8dcae470e1c88abc2d600fff4a776286da75e637"; - }; - }; "is-posix-bracket-0.1.1" = { name = "is-posix-bracket"; packageName = "is-posix-bracket"; @@ -9971,13 +10079,13 @@ let sha1 = "3334dc79774368e92f016e6fbc0a88f5cd6e6bc4"; }; }; - "for-own-0.1.4" = { + "for-own-0.1.5" = { name = "for-own"; packageName = "for-own"; - version = "0.1.4"; + version = "0.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/for-own/-/for-own-0.1.4.tgz"; - sha1 = "0149b41a39088c7515f51ebe1c1386d45f935072"; + url = "https://registry.npmjs.org/for-own/-/for-own-0.1.5.tgz"; + sha1 = "5265c681a4f294dabbf17c9509b6763aa84510ce"; }; }; "is-extendable-0.1.1" = { @@ -9989,13 +10097,13 @@ let sha1 = "62b110e289a471418e3ec36a617d472e301dfc89"; }; }; - "for-in-0.1.6" = { + "for-in-1.0.1" = { name = "for-in"; packageName = "for-in"; - version = "0.1.6"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/for-in/-/for-in-0.1.6.tgz"; - sha1 = "c9f96e89bfad18a545af5ec3ed352a1d9e5b4dc8"; + url = "https://registry.npmjs.org/for-in/-/for-in-1.0.1.tgz"; + sha1 = "d6c3e3798ceaaa301047b109dedf1b1ae37a0efa"; }; }; "glob-base-0.3.0" = { @@ -10251,13 +10359,13 @@ let sha1 = "a4274eeb32fa765da5a7a3b1712617ce3b144149"; }; }; - "coffee-script-1.12.3" = { + "coffee-script-1.12.4" = { name = "coffee-script"; packageName = "coffee-script"; - version = "1.12.3"; + version = "1.12.4"; src = fetchurl { - url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.3.tgz"; - sha1 = "de5f4b1b934a4e9f915c57acd7ad323f68f715db"; + url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.4.tgz"; + sha1 = "fe1bced97fe1fb3927b998f2b45616e0658be1ff"; }; }; "jade-1.11.0" = { @@ -10296,13 +10404,13 @@ let sha1 = "c0dde4ab182713b919b970959a123ecc1a30fcd6"; }; }; - "clean-css-3.4.24" = { + "clean-css-3.4.25" = { name = "clean-css"; packageName = "clean-css"; - version = "3.4.24"; + version = "3.4.25"; src = fetchurl { - url = "https://registry.npmjs.org/clean-css/-/clean-css-3.4.24.tgz"; - sha1 = "89f5a5e9da37ae02394fe049a41388abbe72c3b5"; + url = "https://registry.npmjs.org/clean-css/-/clean-css-3.4.25.tgz"; + sha1 = "9e9a52d5c1e6bc5123e1b2783fa65fe958946ede"; }; }; "commander-2.6.0" = { @@ -10467,85 +10575,13 @@ let sha1 = "b0d042946db2953bb9d292900a6cb5f6d0122031"; }; }; - "yargs-3.10.0" = { - name = "yargs"; - packageName = "yargs"; - version = "3.10.0"; + "optimist-0.3.7" = { + name = "optimist"; + packageName = "optimist"; + version = "0.3.7"; src = fetchurl { - url = "https://registry.npmjs.org/yargs/-/yargs-3.10.0.tgz"; - sha1 = "f7ee7bd857dd7c1d2d38c0e74efbd681d1431fd1"; - }; - }; - "camelcase-1.2.1" = { - name = "camelcase"; - packageName = "camelcase"; - version = "1.2.1"; - src = fetchurl { - url = "https://registry.npmjs.org/camelcase/-/camelcase-1.2.1.tgz"; - sha1 = "9bb5304d2e0b56698b2c758b08a3eaa9daa58a39"; - }; - }; - "cliui-2.1.0" = { - name = "cliui"; - packageName = "cliui"; - version = "2.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/cliui/-/cliui-2.1.0.tgz"; - sha1 = "4b475760ff80264c762c3a1719032e91c7fea0d1"; - }; - }; - "window-size-0.1.0" = { - name = "window-size"; - packageName = "window-size"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/window-size/-/window-size-0.1.0.tgz"; - sha1 = "5438cd2ea93b202efa3a19fe8887aee7c94f9c9d"; - }; - }; - "center-align-0.1.3" = { - name = "center-align"; - packageName = "center-align"; - version = "0.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/center-align/-/center-align-0.1.3.tgz"; - sha1 = "aa0d32629b6ee972200411cbd4461c907bc2b7ad"; - }; - }; - "right-align-0.1.3" = { - name = "right-align"; - packageName = "right-align"; - version = "0.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/right-align/-/right-align-0.1.3.tgz"; - sha1 = "61339b722fe6a3515689210d24e14c96148613ef"; - }; - }; - "align-text-0.1.4" = { - name = "align-text"; - packageName = "align-text"; - version = "0.1.4"; - src = fetchurl { - url = "https://registry.npmjs.org/align-text/-/align-text-0.1.4.tgz"; - sha1 = "0cd90a561093f35d0a99256c22b7069433fad117"; - }; - }; - "lazy-cache-1.0.4" = { - name = "lazy-cache"; - packageName = "lazy-cache"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/lazy-cache/-/lazy-cache-1.0.4.tgz"; - sha1 = "a1d78fc3a50474cb80845d3b3b6e1da49a446e8e"; - }; - }; - "longest-1.0.1" = { - name = "longest"; - packageName = "longest"; - version = "1.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/longest/-/longest-1.0.1.tgz"; - sha1 = "30a0b2da38f73770e8294a0d22e6625ed77d0097"; + url = "https://registry.npmjs.org/optimist/-/optimist-0.3.7.tgz"; + sha1 = "c90941ad59e4273328923074d2cf2e7cbc6ec0d9"; }; }; "acorn-globals-1.0.9" = { @@ -11349,6 +11385,15 @@ let sha1 = "1d09a3bd913c4cadfa81bf18d582bd85bffe0d44"; }; }; + "strip-json-comments-1.0.4" = { + name = "strip-json-comments"; + packageName = "strip-json-comments"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/strip-json-comments/-/strip-json-comments-1.0.4.tgz"; + sha1 = "1e15fbcac97d3ee99bf2d73b4c656b082bbafb91"; + }; + }; "xml-1.0.0" = { name = "xml"; packageName = "xml"; @@ -11574,13 +11619,13 @@ let sha1 = "458c07e09e0d900fc28b70a3fec2dacd1d2cb7f6"; }; }; - "connect-3.5.0" = { + "connect-3.6.0" = { name = "connect"; packageName = "connect"; - version = "3.5.0"; + version = "3.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/connect/-/connect-3.5.0.tgz"; - sha1 = "b357525a0b4c1f50599cd983e1d9efeea9677198"; + url = "https://registry.npmjs.org/connect/-/connect-3.6.0.tgz"; + sha1 = "f09a4f7dcd17324b663b725c815bdb1c4158a46e"; }; }; "core-js-2.4.1" = { @@ -11655,22 +11700,22 @@ let sha1 = "659de9f2cf8dcc27a1481276f205377272382e73"; }; }; - "socket.io-1.7.2" = { + "socket.io-1.7.3" = { name = "socket.io"; packageName = "socket.io"; - version = "1.7.2"; + version = "1.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/socket.io/-/socket.io-1.7.2.tgz"; - sha1 = "83bbbdf2e79263b378900da403e7843e05dc3b71"; + url = "https://registry.npmjs.org/socket.io/-/socket.io-1.7.3.tgz"; + sha1 = "b8af9caba00949e568e369f1327ea9be9ea2461b"; }; }; - "tmp-0.0.28" = { + "tmp-0.0.31" = { name = "tmp"; packageName = "tmp"; - version = "0.0.28"; + version = "0.0.31"; src = fetchurl { - url = "https://registry.npmjs.org/tmp/-/tmp-0.0.28.tgz"; - sha1 = "172735b7f614ea7af39664fa84cf0de4e515d120"; + url = "https://registry.npmjs.org/tmp/-/tmp-0.0.31.tgz"; + sha1 = "8f38ab9438e17315e5dbd8b3657e8bfb277ae4a7"; }; }; "useragent-2.1.12" = { @@ -11700,6 +11745,15 @@ let sha1 = "fe265a218ac6a57cfe854927e9d04c19825eddeb"; }; }; + "qs-6.2.1" = { + name = "qs"; + packageName = "qs"; + version = "6.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/qs/-/qs-6.2.1.tgz"; + sha1 = "ce03c5ff0935bc1d9d69a9f14cbd18e568d67625"; + }; + }; "raw-body-2.2.0" = { name = "raw-body"; packageName = "raw-body"; @@ -11709,13 +11763,13 @@ let sha1 = "994976cf6a5096a41162840492f0bdc5d6e7fb96"; }; }; - "finalhandler-0.5.0" = { + "finalhandler-1.0.0" = { name = "finalhandler"; packageName = "finalhandler"; - version = "0.5.0"; + version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/finalhandler/-/finalhandler-0.5.0.tgz"; - sha1 = "e9508abece9b6dba871a6942a1d7911b91911ac7"; + url = "https://registry.npmjs.org/finalhandler/-/finalhandler-1.0.0.tgz"; + sha1 = "b5691c2c0912092f18ac23e9416bde5cd7dc6755"; }; }; "custom-event-1.0.1" = { @@ -11808,13 +11862,13 @@ let sha1 = "40c453e67e6e13c901ddec317af8986cda9eff8c"; }; }; - "engine.io-1.8.2" = { + "engine.io-1.8.3" = { name = "engine.io"; packageName = "engine.io"; - version = "1.8.2"; + version = "1.8.3"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io/-/engine.io-1.8.2.tgz"; - sha1 = "6b59be730b348c0125b0a4589de1c355abcf7a7e"; + url = "https://registry.npmjs.org/engine.io/-/engine.io-1.8.3.tgz"; + sha1 = "8de7f97895d20d39b85f88eeee777b2bd42b13d4"; }; }; "has-binary-0.1.7" = { @@ -11844,13 +11898,13 @@ let sha1 = "cb6d4bb8bec81e1078b99677f9ced0046066bb8b"; }; }; - "socket.io-client-1.7.2" = { + "socket.io-client-1.7.3" = { name = "socket.io-client"; packageName = "socket.io-client"; - version = "1.7.2"; + version = "1.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/socket.io-client/-/socket.io-client-1.7.2.tgz"; - sha1 = "39fdb0c3dd450e321b7e40cfd83612ec533dd644"; + url = "https://registry.npmjs.org/socket.io-client/-/socket.io-client-1.7.3.tgz"; + sha1 = "b30e86aa10d5ef3546601c09cde4765e381da377"; }; }; "socket.io-parser-2.3.1" = { @@ -11952,13 +12006,13 @@ let sha1 = "137918d6d78283f7df7a6b7c5a63e140e69425e6"; }; }; - "engine.io-client-1.8.2" = { + "engine.io-client-1.8.3" = { name = "engine.io-client"; packageName = "engine.io-client"; - version = "1.8.2"; + version = "1.8.3"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-1.8.2.tgz"; - sha1 = "c38767547f2a7d184f5752f6f0ad501006703766"; + url = "https://registry.npmjs.org/engine.io-client/-/engine.io-client-1.8.3.tgz"; + sha1 = "1798ed93451246453d4c6f635d7a201fe940d5ab"; }; }; "object-component-0.0.3" = { @@ -12744,13 +12798,13 @@ let sha1 = "51af7d614ad9a9f610ea1bafbb989d6b1c56890f"; }; }; - "convert-source-map-1.3.0" = { + "convert-source-map-1.4.0" = { name = "convert-source-map"; packageName = "convert-source-map"; - version = "1.3.0"; + version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.3.0.tgz"; - sha1 = "e9f3e9c6e2728efc2676696a70eb382f73106a67"; + url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.4.0.tgz"; + sha1 = "e3dad195bf61bfe13a7a3c73e9876ec14a0268f3"; }; }; "express-2.5.11" = { @@ -13104,6 +13158,15 @@ let sha1 = "159a49b9a9714c1fb102f2e0ed1906fab6a450f4"; }; }; + "serve-favicon-2.4.0" = { + name = "serve-favicon"; + packageName = "serve-favicon"; + version = "2.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/serve-favicon/-/serve-favicon-2.4.0.tgz"; + sha1 = "064dcdfdb0f250ae3b148eb18c8bbf3d185e3dd0"; + }; + }; "strong-data-uri-1.0.4" = { name = "strong-data-uri"; packageName = "strong-data-uri"; @@ -13212,6 +13275,24 @@ let sha1 = "17eb2807987f76952e9c0485fc311d06a826a2e0"; }; }; + "etag-1.8.0" = { + name = "etag"; + packageName = "etag"; + version = "1.8.0"; + src = fetchurl { + url = "https://registry.npmjs.org/etag/-/etag-1.8.0.tgz"; + sha1 = "6f631aef336d6c46362b51764044ce216be3c051"; + }; + }; + "fresh-0.4.0" = { + name = "fresh"; + packageName = "fresh"; + version = "0.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/fresh/-/fresh-0.4.0.tgz"; + sha1 = "475626a934a8d3480b2101a1d6ecef7dafd7c553"; + }; + }; "truncate-1.0.5" = { name = "truncate"; packageName = "truncate"; @@ -13563,6 +13644,15 @@ let sha1 = "aba03fc3bb736d6c88b091d013d8a8e590d84718"; }; }; + "ws-1.1.1" = { + name = "ws"; + packageName = "ws"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/ws/-/ws-1.1.1.tgz"; + sha1 = "082ddb6c641e85d4bb451f03d52f06eabdb1f018"; + }; + }; "node-red-node-feedparser-0.1.7" = { name = "node-red-node-feedparser"; packageName = "node-red-node-feedparser"; @@ -13572,13 +13662,13 @@ let sha1 = "b0bf8a079d67732bcce019eaf8da1d7936658a7f"; }; }; - "node-red-node-email-0.1.16" = { + "node-red-node-email-0.1.21" = { name = "node-red-node-email"; packageName = "node-red-node-email"; - version = "0.1.16"; + version = "0.1.21"; src = fetchurl { - url = "https://registry.npmjs.org/node-red-node-email/-/node-red-node-email-0.1.16.tgz"; - sha1 = "ede78397c857d28e6785f2f1425e7d89d3b1ed38"; + url = "https://registry.npmjs.org/node-red-node-email/-/node-red-node-email-0.1.21.tgz"; + sha1 = "63baed16d538e786ddadc169b23552d9eb9abc30"; }; }; "node-red-node-twitter-0.1.9" = { @@ -13770,6 +13860,15 @@ let sha1 = "87476c6a67c8daa87e32e87616df883ba7fb071b"; }; }; + "finalhandler-0.5.0" = { + name = "finalhandler"; + packageName = "finalhandler"; + version = "0.5.0"; + src = fetchurl { + url = "https://registry.npmjs.org/finalhandler/-/finalhandler-0.5.0.tgz"; + sha1 = "e9508abece9b6dba871a6942a1d7911b91911ac7"; + }; + }; "send-0.14.1" = { name = "send"; packageName = "send"; @@ -13788,13 +13887,13 @@ let sha1 = "fdc90eed943fde11b893554b8cc63d0e899ba918"; }; }; - "cookies-0.6.2" = { + "cookies-0.7.0" = { name = "cookies"; packageName = "cookies"; - version = "0.6.2"; + version = "0.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/cookies/-/cookies-0.6.2.tgz"; - sha1 = "6ac1b052895208e8fc4c4f5f86a9ed31b9cb5ccf"; + url = "https://registry.npmjs.org/cookies/-/cookies-0.7.0.tgz"; + sha1 = "0bc961d910c35254980fc7c9eff5da12011bbf00"; }; }; "i18next-client-1.10.3" = { @@ -14733,15 +14832,6 @@ let sha1 = "8cdd8fbac4e2d2ea1e7e2e8097c42f442280f85b"; }; }; - "aproba-1.0.4" = { - name = "aproba"; - packageName = "aproba"; - version = "1.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/aproba/-/aproba-1.0.4.tgz"; - sha1 = "2713680775e7614c8ba186c065d4e2e52d1072c0"; - }; - }; "fstream-npm-1.2.0" = { name = "fstream-npm"; packageName = "fstream-npm"; @@ -14751,6 +14841,15 @@ let sha1 = "d2c3c89101346982d64e57091c38487bda916fce"; }; }; + "lazy-property-1.0.0" = { + name = "lazy-property"; + packageName = "lazy-property"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/lazy-property/-/lazy-property-1.0.0.tgz"; + sha1 = "84ddc4b370679ba8bd4cdcfa4c06b43d57111147"; + }; + }; "lodash._baseuniq-4.6.0" = { name = "lodash._baseuniq"; packageName = "lodash._baseuniq"; @@ -14841,13 +14940,13 @@ let sha1 = "1ef61851bb7231db53e397aaf76ddf1cb645c3df"; }; }; - "opener-1.4.2" = { + "opener-1.4.3" = { name = "opener"; packageName = "opener"; - version = "1.4.2"; + version = "1.4.3"; src = fetchurl { - url = "https://registry.npmjs.org/opener/-/opener-1.4.2.tgz"; - sha1 = "b32582080042af8680c389a499175b4c54fff523"; + url = "https://registry.npmjs.org/opener/-/opener-1.4.3.tgz"; + sha1 = "5c6da2c5d7e5831e8ffa3964950f8d6674ac90b8"; }; }; "read-cmd-shim-1.0.1" = { @@ -15255,6 +15354,15 @@ let sha1 = "8f92c515482bd6831b7c93013e70f87552c7cf5a"; }; }; + "aproba-1.0.4" = { + name = "aproba"; + packageName = "aproba"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/aproba/-/aproba-1.0.4.tgz"; + sha1 = "2713680775e7614c8ba186c065d4e2e52d1072c0"; + }; + }; "request-2.75.0" = { name = "request"; packageName = "request"; @@ -15519,13 +15627,13 @@ let sha1 = "78717d9b718ce7cab55e20b9f24388d5fa51d5c0"; }; }; - "service-runner-2.1.15" = { + "service-runner-2.2.4" = { name = "service-runner"; packageName = "service-runner"; - version = "2.1.15"; + version = "2.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/service-runner/-/service-runner-2.1.15.tgz"; - sha1 = "8b3d05729def7a0ce211e0483d9d907f13febbfb"; + url = "https://registry.npmjs.org/service-runner/-/service-runner-2.2.4.tgz"; + sha1 = "75cc51113d31d4bb287130880b38f82d7bb4c42c"; }; }; "simplediff-0.1.1" = { @@ -15645,13 +15753,13 @@ let sha1 = "58a6c1ff717f25673be4d2f736d1c94d5d79e239"; }; }; - "limitation-0.1.9" = { + "limitation-0.2.0" = { name = "limitation"; packageName = "limitation"; - version = "0.1.9"; + version = "0.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/limitation/-/limitation-0.1.9.tgz"; - sha1 = "ba055ff7dd3a267a65cc6be2deca4ea6bebbdb03"; + url = "https://registry.npmjs.org/limitation/-/limitation-0.2.0.tgz"; + sha1 = "70ce102a972a0b79d4ca13a3ab62b8e6fe682a62"; }; }; "yargs-6.6.0" = { @@ -15663,6 +15771,15 @@ let sha1 = "782ec21ef403345f830a808ca3d513af56065208"; }; }; + "dnscache-1.0.1" = { + name = "dnscache"; + packageName = "dnscache"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/dnscache/-/dnscache-1.0.1.tgz"; + sha1 = "42cb2b9bfb5e8fbdfa395aac74e127fc05074d31"; + }; + }; "dtrace-provider-0.8.0" = { name = "dtrace-provider"; packageName = "dtrace-provider"; @@ -15844,6 +15961,24 @@ let sha1 = "29cceac0dc4f03c6c87b4a9f217dd18c9f74871c"; }; }; + "lodash.clone-4.3.2" = { + name = "lodash.clone"; + packageName = "lodash.clone"; + version = "4.3.2"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash.clone/-/lodash.clone-4.3.2.tgz"; + sha1 = "e56b176b6823a7dde38f7f2bf58de7d5971200e9"; + }; + }; + "lodash._baseclone-4.5.7" = { + name = "lodash._baseclone"; + packageName = "lodash._baseclone"; + version = "4.5.7"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash._baseclone/-/lodash._baseclone-4.5.7.tgz"; + sha1 = "ce42ade08384ef5d62fa77c30f61a46e686f8434"; + }; + }; "lodash.assign-4.2.0" = { name = "lodash.assign"; packageName = "lodash.assign"; @@ -16807,13 +16942,13 @@ let sha1 = "68ce5e8a1ef0a23bb570cc28537b5332aba63ef1"; }; }; - "recast-0.11.21" = { + "recast-0.11.22" = { name = "recast"; packageName = "recast"; - version = "0.11.21"; + version = "0.11.22"; src = fetchurl { - url = "https://registry.npmjs.org/recast/-/recast-0.11.21.tgz"; - sha1 = "4e83081c6359ecb2e526d14f4138879333f20ac9"; + url = "https://registry.npmjs.org/recast/-/recast-0.11.22.tgz"; + sha1 = "dedeb18fb001a2bbc6ac34475fda53dfe3d47dfa"; }; }; "ast-types-0.9.5" = { @@ -17177,6 +17312,15 @@ let sha1 = "2af824ae20eccb8f902325b1a2c27dd6619805c9"; }; }; + "http-errors-1.6.1" = { + name = "http-errors"; + packageName = "http-errors"; + version = "1.6.1"; + src = fetchurl { + url = "https://registry.npmjs.org/http-errors/-/http-errors-1.6.1.tgz"; + sha1 = "5f8b8ed98aca545656bf572997387f904a722257"; + }; + }; "fs-ext-0.5.0" = { name = "fs-ext"; packageName = "fs-ext"; @@ -17294,6 +17438,15 @@ let sha1 = "1e0f4650c862dcbfed54fd42b148e9bb1721fcf2"; }; }; + "setprototypeof-1.0.3" = { + name = "setprototypeof"; + packageName = "setprototypeof"; + version = "1.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/setprototypeof/-/setprototypeof-1.0.3.tgz"; + sha1 = "66567e37043eeb4f04d91bd658c0cbefb55b8e04"; + }; + }; "lru-cache-2.2.0" = { name = "lru-cache"; packageName = "lru-cache"; @@ -17681,6 +17834,15 @@ let sha1 = "316545bf22229225a2cecaa6824cd2f56a9709ed"; }; }; + "acorn-4.0.11" = { + name = "acorn"; + packageName = "acorn"; + version = "4.0.11"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn/-/acorn-4.0.11.tgz"; + sha1 = "edcda3bd937e7556410d42ed5860f67399c794c0"; + }; + }; "enhanced-resolve-2.3.0" = { name = "enhanced-resolve"; packageName = "enhanced-resolve"; @@ -17870,15 +18032,6 @@ let sha1 = "7a31c97f7869246d76c5cf2f5c977a1c4c8e5ab5"; }; }; - "uglify-js-2.6.1" = { - name = "uglify-js"; - packageName = "uglify-js"; - version = "2.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-2.6.1.tgz"; - sha1 = "edbbe1888ba3525ded3a7bf836b30b3405d3161b"; - }; - }; "xmldom-0.1.22" = { name = "xmldom"; packageName = "xmldom"; @@ -17888,13 +18041,13 @@ let sha1 = "10de4e5e964981f03c8cc72fadc08d14b6c3aa26"; }; }; - "qs-6.0.2" = { + "qs-6.0.3" = { name = "qs"; packageName = "qs"; - version = "6.0.2"; + version = "6.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.0.2.tgz"; - sha1 = "88c68d590e8ed56c76c79f352c17b982466abfcd"; + url = "https://registry.npmjs.org/qs/-/qs-6.0.3.tgz"; + sha1 = "95f870b23e70268fba18704e80667515905af06c"; }; }; "blueimp-md5-2.6.0" = { @@ -17987,6 +18140,15 @@ let sha1 = "8bd057bde8f7d0a02b93dda433c2a8d942d8a9a0"; }; }; + "node-cache-4.1.1" = { + name = "node-cache"; + packageName = "node-cache"; + version = "4.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/node-cache/-/node-cache-4.1.1.tgz"; + sha1 = "08524645ee4039dedc3dcc1dd7c6b979e0619e44"; + }; + }; "npm-4.1.2" = { name = "npm"; packageName = "npm"; @@ -18059,13 +18221,13 @@ let sha1 = "1accf97dd739b983bf994d56fec8f95853641b7a"; }; }; - "color-string-1.4.0" = { + "color-string-1.5.0" = { name = "color-string"; packageName = "color-string"; - version = "1.4.0"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/color-string/-/color-string-1.4.0.tgz"; - sha1 = "2b47f8565fb0eb52f9f77c801992b8ca55d6e898"; + url = "https://registry.npmjs.org/color-string/-/color-string-1.5.0.tgz"; + sha1 = "f9a7a0553e55b34d18a463c06f13e3384dd960ce"; }; }; "color-name-1.1.1" = { @@ -18320,15 +18482,6 @@ let sha1 = "4424aca20e14d255c0b0889af6f6b8973da10e0d"; }; }; - "tmp-0.0.31" = { - name = "tmp"; - packageName = "tmp"; - version = "0.0.31"; - src = fetchurl { - url = "https://registry.npmjs.org/tmp/-/tmp-0.0.31.tgz"; - sha1 = "8f38ab9438e17315e5dbd8b3657e8bfb277ae4a7"; - }; - }; "follow-redirects-0.0.3" = { name = "follow-redirects"; packageName = "follow-redirects"; @@ -18338,15 +18491,6 @@ let sha1 = "6ce67a24db1fe13f226c1171a72a7ef2b17b8f65"; }; }; - "acorn-4.0.11" = { - name = "acorn"; - packageName = "acorn"; - version = "4.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/acorn/-/acorn-4.0.11.tgz"; - sha1 = "edcda3bd937e7556410d42ed5860f67399c794c0"; - }; - }; "acorn-dynamic-import-2.0.1" = { name = "acorn-dynamic-import"; packageName = "acorn-dynamic-import"; @@ -18383,13 +18527,13 @@ let sha1 = "f482aea82d543e07921700d5a46ef26fdac6b8a2"; }; }; - "loader-utils-0.2.16" = { + "loader-utils-0.2.17" = { name = "loader-utils"; packageName = "loader-utils"; - version = "0.2.16"; + version = "0.2.17"; src = fetchurl { - url = "https://registry.npmjs.org/loader-utils/-/loader-utils-0.2.16.tgz"; - sha1 = "f08632066ed8282835dff88dfb52704765adee6d"; + url = "https://registry.npmjs.org/loader-utils/-/loader-utils-0.2.17.tgz"; + sha1 = "f86e6374d43205a6e6c60e9196f17c0299bfb348"; }; }; "memory-fs-0.4.1" = { @@ -18410,13 +18554,13 @@ let sha1 = "a3a59ec97024985b46e958379646f96c4b616646"; }; }; - "watchpack-1.2.0" = { + "watchpack-1.3.1" = { name = "watchpack"; packageName = "watchpack"; - version = "1.2.0"; + version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/watchpack/-/watchpack-1.2.0.tgz"; - sha1 = "15d4620f1e7471f13fcb551d5c030d2c3eb42dbb"; + url = "https://registry.npmjs.org/watchpack/-/watchpack-1.3.1.tgz"; + sha1 = "7d8693907b28ce6013e7f3610aa2a1acf07dad87"; }; }; "webpack-sources-0.1.4" = { @@ -18491,13 +18635,13 @@ let sha1 = "c550b2ab5427f6b3f21f5afead88c4f5587b2106"; }; }; - "babel-runtime-6.22.0" = { + "babel-runtime-6.23.0" = { name = "babel-runtime"; packageName = "babel-runtime"; - version = "6.22.0"; + version = "6.23.0"; src = fetchurl { - url = "https://registry.npmjs.org/babel-runtime/-/babel-runtime-6.22.0.tgz"; - sha1 = "1cf8b4ac67c77a4ddb0db2ae1f74de52ac4ca611"; + url = "https://registry.npmjs.org/babel-runtime/-/babel-runtime-6.23.0.tgz"; + sha1 = "0a9489f144de70efb3ce4300accdb329e2fc543b"; }; }; "death-1.1.0" = { @@ -18509,13 +18653,13 @@ let sha1 = "01aa9c401edd92750514470b8266390c66c67318"; }; }; - "detect-indent-4.0.0" = { + "detect-indent-5.0.0" = { name = "detect-indent"; packageName = "detect-indent"; - version = "4.0.0"; + version = "5.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/detect-indent/-/detect-indent-4.0.0.tgz"; - sha1 = "f76d064352cdf43a1cb6ce619c4ee3a9475de208"; + url = "https://registry.npmjs.org/detect-indent/-/detect-indent-5.0.0.tgz"; + sha1 = "3871cc0a6a002e8c3e5b3cf7f336264675f06b9d"; }; }; "diff-2.2.3" = { @@ -18527,6 +18671,15 @@ let sha1 = "60eafd0d28ee906e4e8ff0a52c1229521033bf99"; }; }; + "inquirer-3.0.5" = { + name = "inquirer"; + packageName = "inquirer"; + version = "3.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/inquirer/-/inquirer-3.0.5.tgz"; + sha1 = "172cabc8eacbfb91d595f5d7c354b446b8141f65"; + }; + }; "invariant-2.2.2" = { name = "invariant"; packageName = "invariant"; @@ -18545,13 +18698,13 @@ let sha1 = "f739336b2632365061a9d48270cd56ae3369318e"; }; }; - "leven-2.0.0" = { + "leven-2.1.0" = { name = "leven"; packageName = "leven"; - version = "2.0.0"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/leven/-/leven-2.0.0.tgz"; - sha1 = "74c45744439550da185801912829f61d22071bc1"; + url = "https://registry.npmjs.org/leven/-/leven-2.1.0.tgz"; + sha1 = "c2e7a9f772094dee9d34202ae8acce4687875580"; }; }; "node-emoji-1.5.1" = { @@ -18563,13 +18716,13 @@ let sha1 = "fd918e412769bf8c448051238233840b2aff16a1"; }; }; - "object-path-0.11.3" = { + "object-path-0.11.4" = { name = "object-path"; packageName = "object-path"; - version = "0.11.3"; + version = "0.11.4"; src = fetchurl { - url = "https://registry.npmjs.org/object-path/-/object-path-0.11.3.tgz"; - sha1 = "3e21a42ad07234d815429ae9e15c1c5f38050554"; + url = "https://registry.npmjs.org/object-path/-/object-path-0.11.4.tgz"; + sha1 = "370ae752fbf37de3ea70a861c23bba8915691949"; }; }; "proper-lockfile-2.0.0" = { @@ -18599,13 +18752,58 @@ let sha1 = "1180a30d64e1970d8f55dd8cb0da8ffccecad71e"; }; }; - "regenerator-runtime-0.10.1" = { + "regenerator-runtime-0.10.3" = { name = "regenerator-runtime"; packageName = "regenerator-runtime"; - version = "0.10.1"; + version = "0.10.3"; src = fetchurl { - url = "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.10.1.tgz"; - sha1 = "257f41961ce44558b18f7814af48c17559f9faeb"; + url = "https://registry.npmjs.org/regenerator-runtime/-/regenerator-runtime-0.10.3.tgz"; + sha1 = "8c4367a904b51ea62a908ac310bf99ff90a82a3e"; + }; + }; + "cli-cursor-2.1.0" = { + name = "cli-cursor"; + packageName = "cli-cursor"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/cli-cursor/-/cli-cursor-2.1.0.tgz"; + sha1 = "b35dac376479facc3e94747d41d0d0f5238ffcb5"; + }; + }; + "external-editor-2.0.1" = { + name = "external-editor"; + packageName = "external-editor"; + version = "2.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/external-editor/-/external-editor-2.0.1.tgz"; + sha1 = "4c597c6c88fa6410e41dbbaa7b1be2336aa31095"; + }; + }; + "figures-2.0.0" = { + name = "figures"; + packageName = "figures"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/figures/-/figures-2.0.0.tgz"; + sha1 = "3ab1a2d2a62c8bfb431a0c94cb797a2fce27c962"; + }; + }; + "restore-cursor-2.0.0" = { + name = "restore-cursor"; + packageName = "restore-cursor"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/restore-cursor/-/restore-cursor-2.0.0.tgz"; + sha1 = "9f7ee287f82fd326d4fd162923d62129eee0dfaf"; + }; + }; + "onetime-2.0.0" = { + name = "onetime"; + packageName = "onetime"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/onetime/-/onetime-2.0.0.tgz"; + sha1 = "52aa8110e52fc5126ffc667bd8ec21c2ed209ce6"; }; }; "loose-envify-1.3.1" = { @@ -18635,16 +18833,439 @@ let sha1 = "6b26e9bd3afcaa7be3b4269b526de1b82000ac78"; }; }; + "cli-list-0.1.8" = { + name = "cli-list"; + packageName = "cli-list"; + version = "0.1.8"; + src = fetchurl { + url = "https://registry.npmjs.org/cli-list/-/cli-list-0.1.8.tgz"; + sha1 = "aee6d45c4c59bf80068bb968089fb06f1aeddc0a"; + }; + }; + "cross-spawn-3.0.1" = { + name = "cross-spawn"; + packageName = "cross-spawn"; + version = "3.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/cross-spawn/-/cross-spawn-3.0.1.tgz"; + sha1 = "1256037ecb9f0c5f79e3d6ef135e30770184b982"; + }; + }; + "fullname-2.1.0" = { + name = "fullname"; + packageName = "fullname"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/fullname/-/fullname-2.1.0.tgz"; + sha1 = "c46bf0f7c3f24fd5b3358d00e4a41380eef87350"; + }; + }; + "humanize-string-1.0.1" = { + name = "humanize-string"; + packageName = "humanize-string"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/humanize-string/-/humanize-string-1.0.1.tgz"; + sha1 = "fce2d6c545efc25dea1f23235182c98da0180b42"; + }; + }; + "inquirer-0.11.4" = { + name = "inquirer"; + packageName = "inquirer"; + version = "0.11.4"; + src = fetchurl { + url = "https://registry.npmjs.org/inquirer/-/inquirer-0.11.4.tgz"; + sha1 = "81e3374e8361beaff2d97016206d359d0b32fa4d"; + }; + }; + "insight-0.7.0" = { + name = "insight"; + packageName = "insight"; + version = "0.7.0"; + src = fetchurl { + url = "https://registry.npmjs.org/insight/-/insight-0.7.0.tgz"; + sha1 = "061f9189835bd38a97a60c2b76ea0c6b30099ff6"; + }; + }; + "npm-keyword-4.2.0" = { + name = "npm-keyword"; + packageName = "npm-keyword"; + version = "4.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/npm-keyword/-/npm-keyword-4.2.0.tgz"; + sha1 = "98ffebfdbb1336f27ef5fe1baca0dcacd0acf6c0"; + }; + }; + "opn-3.0.3" = { + name = "opn"; + packageName = "opn"; + version = "3.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/opn/-/opn-3.0.3.tgz"; + sha1 = "b6d99e7399f78d65c3baaffef1fb288e9b85243a"; + }; + }; + "parse-help-0.1.1" = { + name = "parse-help"; + packageName = "parse-help"; + version = "0.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/parse-help/-/parse-help-0.1.1.tgz"; + sha1 = "2f4df942e77a5581bba9967c0c3f48e4c66d7dda"; + }; + }; + "root-check-1.0.0" = { + name = "root-check"; + packageName = "root-check"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/root-check/-/root-check-1.0.0.tgz"; + sha1 = "c52a794bf0db9fad567536e41898f0c9e0a86697"; + }; + }; + "sort-on-1.3.0" = { + name = "sort-on"; + packageName = "sort-on"; + version = "1.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sort-on/-/sort-on-1.3.0.tgz"; + sha1 = "0dfd5b364b23df7f2acd86985daeb889e1a7c840"; + }; + }; + "tabtab-1.3.2" = { + name = "tabtab"; + packageName = "tabtab"; + version = "1.3.2"; + src = fetchurl { + url = "https://registry.npmjs.org/tabtab/-/tabtab-1.3.2.tgz"; + sha1 = "bb9c2ca6324f659fde7634c2caf3c096e1187ca7"; + }; + }; + "titleize-1.0.0" = { + name = "titleize"; + packageName = "titleize"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/titleize/-/titleize-1.0.0.tgz"; + sha1 = "7d350722061830ba6617631e0cfd3ea08398d95a"; + }; + }; + "update-notifier-0.6.3" = { + name = "update-notifier"; + packageName = "update-notifier"; + version = "0.6.3"; + src = fetchurl { + url = "https://registry.npmjs.org/update-notifier/-/update-notifier-0.6.3.tgz"; + sha1 = "776dec8daa13e962a341e8a1d98354306b67ae08"; + }; + }; + "yeoman-character-1.1.0" = { + name = "yeoman-character"; + packageName = "yeoman-character"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-character/-/yeoman-character-1.1.0.tgz"; + sha1 = "90d4b5beaf92759086177015b2fdfa2e0684d7c7"; + }; + }; + "yeoman-doctor-2.1.0" = { + name = "yeoman-doctor"; + packageName = "yeoman-doctor"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-doctor/-/yeoman-doctor-2.1.0.tgz"; + sha1 = "94ab784896a64f53a9fac452d5e9133e2750a236"; + }; + }; + "yeoman-environment-1.6.6" = { + name = "yeoman-environment"; + packageName = "yeoman-environment"; + version = "1.6.6"; + src = fetchurl { + url = "https://registry.npmjs.org/yeoman-environment/-/yeoman-environment-1.6.6.tgz"; + sha1 = "cd85fa67d156060e440d7807d7ef7cf0d2d1d671"; + }; + }; + "yosay-1.2.1" = { + name = "yosay"; + packageName = "yosay"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/yosay/-/yosay-1.2.1.tgz"; + sha1 = "9466ef969830e85b474e267b50f7688693ed3b5b"; + }; + }; + "npmconf-2.1.2" = { + name = "npmconf"; + packageName = "npmconf"; + version = "2.1.2"; + src = fetchurl { + url = "https://registry.npmjs.org/npmconf/-/npmconf-2.1.2.tgz"; + sha1 = "66606a4a736f1e77a059aa071a79c94ab781853a"; + }; + }; + "execall-1.0.0" = { + name = "execall"; + packageName = "execall"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/execall/-/execall-1.0.0.tgz"; + sha1 = "73d0904e395b3cab0658b08d09ec25307f29bb73"; + }; + }; + "clone-regexp-1.0.0" = { + name = "clone-regexp"; + packageName = "clone-regexp"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/clone-regexp/-/clone-regexp-1.0.0.tgz"; + sha1 = "eae0a2413f55c0942f818c229fefce845d7f3b1c"; + }; + }; + "is-regexp-1.0.0" = { + name = "is-regexp"; + packageName = "is-regexp"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-regexp/-/is-regexp-1.0.0.tgz"; + sha1 = "fd2d883545c46bac5a633e7b9a09e87fa2cb5069"; + }; + }; + "is-supported-regexp-flag-1.0.0" = { + name = "is-supported-regexp-flag"; + packageName = "is-supported-regexp-flag"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-supported-regexp-flag/-/is-supported-regexp-flag-1.0.0.tgz"; + sha1 = "8b520c85fae7a253382d4b02652e045576e13bb8"; + }; + }; + "downgrade-root-1.2.2" = { + name = "downgrade-root"; + packageName = "downgrade-root"; + version = "1.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/downgrade-root/-/downgrade-root-1.2.2.tgz"; + sha1 = "531319715b0e81ffcc22eb28478ba27643e12c6c"; + }; + }; + "sudo-block-1.2.0" = { + name = "sudo-block"; + packageName = "sudo-block"; + version = "1.2.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sudo-block/-/sudo-block-1.2.0.tgz"; + sha1 = "cc539bf8191624d4f507d83eeb45b4cea27f3463"; + }; + }; + "default-uid-1.0.0" = { + name = "default-uid"; + packageName = "default-uid"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/default-uid/-/default-uid-1.0.0.tgz"; + sha1 = "fcefa9df9f5ac40c8916d912dd1fe1146aa3c59e"; + }; + }; + "is-root-1.0.0" = { + name = "is-root"; + packageName = "is-root"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-root/-/is-root-1.0.0.tgz"; + sha1 = "07b6c233bc394cd9d02ba15c966bd6660d6342d5"; + }; + }; + "is-docker-1.1.0" = { + name = "is-docker"; + packageName = "is-docker"; + version = "1.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-docker/-/is-docker-1.1.0.tgz"; + sha1 = "f04374d4eee5310e9a8e113bf1495411e46176a1"; + }; + }; + "dot-prop-2.4.0" = { + name = "dot-prop"; + packageName = "dot-prop"; + version = "2.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/dot-prop/-/dot-prop-2.4.0.tgz"; + sha1 = "848e28f7f1d50740c6747ab3cb07670462b6f89c"; + }; + }; + "boxen-0.3.1" = { + name = "boxen"; + packageName = "boxen"; + version = "0.3.1"; + src = fetchurl { + url = "https://registry.npmjs.org/boxen/-/boxen-0.3.1.tgz"; + sha1 = "a7d898243ae622f7abb6bb604d740a76c6a5461b"; + }; + }; + "bin-version-check-2.1.0" = { + name = "bin-version-check"; + packageName = "bin-version-check"; + version = "2.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/bin-version-check/-/bin-version-check-2.1.0.tgz"; + sha1 = "e4e5df290b9069f7d111324031efc13fdd11a5b0"; + }; + }; + "each-async-1.1.1" = { + name = "each-async"; + packageName = "each-async"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/each-async/-/each-async-1.1.1.tgz"; + sha1 = "dee5229bdf0ab6ba2012a395e1b869abf8813473"; + }; + }; + "log-symbols-1.0.2" = { + name = "log-symbols"; + packageName = "log-symbols"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/log-symbols/-/log-symbols-1.0.2.tgz"; + sha1 = "376ff7b58ea3086a0f09facc74617eca501e1a18"; + }; + }; + "object-values-1.0.0" = { + name = "object-values"; + packageName = "object-values"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/object-values/-/object-values-1.0.0.tgz"; + sha1 = "72af839630119e5b98c3b02bb8c27e3237158105"; + }; + }; + "twig-0.8.9" = { + name = "twig"; + packageName = "twig"; + version = "0.8.9"; + src = fetchurl { + url = "https://registry.npmjs.org/twig/-/twig-0.8.9.tgz"; + sha1 = "b1594f002b684e5f029de3e54e87bec4f084b6c2"; + }; + }; + "bin-version-1.0.4" = { + name = "bin-version"; + packageName = "bin-version"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/bin-version/-/bin-version-1.0.4.tgz"; + sha1 = "9eb498ee6fd76f7ab9a7c160436f89579435d78e"; + }; + }; + "semver-truncate-1.1.2" = { + name = "semver-truncate"; + packageName = "semver-truncate"; + version = "1.1.2"; + src = fetchurl { + url = "https://registry.npmjs.org/semver-truncate/-/semver-truncate-1.1.2.tgz"; + sha1 = "57f41de69707a62709a7e0104ba2117109ea47e8"; + }; + }; + "find-versions-1.2.1" = { + name = "find-versions"; + packageName = "find-versions"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/find-versions/-/find-versions-1.2.1.tgz"; + sha1 = "cbde9f12e38575a0af1be1b9a2c5d5fd8f186b62"; + }; + }; + "semver-regex-1.0.0" = { + name = "semver-regex"; + packageName = "semver-regex"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/semver-regex/-/semver-regex-1.0.0.tgz"; + sha1 = "92a4969065f9c70c694753d55248fc68f8f652c9"; + }; + }; + "globby-4.1.0" = { + name = "globby"; + packageName = "globby"; + version = "4.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/globby/-/globby-4.1.0.tgz"; + sha1 = "080f54549ec1b82a6c60e631fc82e1211dbe95f8"; + }; + }; + "grouped-queue-0.3.3" = { + name = "grouped-queue"; + packageName = "grouped-queue"; + version = "0.3.3"; + src = fetchurl { + url = "https://registry.npmjs.org/grouped-queue/-/grouped-queue-0.3.3.tgz"; + sha1 = "c167d2a5319c5a0e0964ef6a25b7c2df8996c85c"; + }; + }; + "mem-fs-1.1.3" = { + name = "mem-fs"; + packageName = "mem-fs"; + version = "1.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/mem-fs/-/mem-fs-1.1.3.tgz"; + sha1 = "b8ae8d2e3fcb6f5d3f9165c12d4551a065d989cc"; + }; + }; + "vinyl-file-2.0.0" = { + name = "vinyl-file"; + packageName = "vinyl-file"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/vinyl-file/-/vinyl-file-2.0.0.tgz"; + sha1 = "a7ebf5ffbefda1b7d18d140fcb07b223efb6751a"; + }; + }; + "strip-bom-stream-2.0.0" = { + name = "strip-bom-stream"; + packageName = "strip-bom-stream"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/strip-bom-stream/-/strip-bom-stream-2.0.0.tgz"; + sha1 = "f87db5ef2613f6968aa545abfe1ec728b6a829ca"; + }; + }; + "first-chunk-stream-2.0.0" = { + name = "first-chunk-stream"; + packageName = "first-chunk-stream"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/first-chunk-stream/-/first-chunk-stream-2.0.0.tgz"; + sha1 = "1bdecdb8e083c0664b91945581577a43a9f31d70"; + }; + }; + "pad-component-0.0.1" = { + name = "pad-component"; + packageName = "pad-component"; + version = "0.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/pad-component/-/pad-component-0.0.1.tgz"; + sha1 = "ad1f22ce1bf0fdc0d6ddd908af17f351a404b8ac"; + }; + }; + "taketalk-1.0.0" = { + name = "taketalk"; + packageName = "taketalk"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/taketalk/-/taketalk-1.0.0.tgz"; + sha1 = "b4d4f0deed206ae7df775b129ea2ca6de52f26dd"; + }; + }; }; in { alloy = nodeEnv.buildNodePackage { name = "alloy"; packageName = "alloy"; - version = "1.9.6"; + version = "1.9.8"; src = fetchurl { - url = "https://registry.npmjs.org/alloy/-/alloy-1.9.6.tgz"; - sha1 = "550505b1a9133189e98276952ad845b8cbcfdc9e"; + url = "https://registry.npmjs.org/alloy/-/alloy-1.9.8.tgz"; + sha1 = "17294e9828a1f11ef241d59f5eb040e6a5b4ed13"; }; dependencies = [ sources."colors-0.6.0-1" @@ -18654,16 +19275,16 @@ in sources."wrench-1.3.9" sources."xmldom-0.1.19" sources."jsonlint-1.5.1" - (sources."uglify-js-2.4.15" // { + (sources."uglify-js-2.6.1" // { dependencies = [ - sources."source-map-0.1.34" + sources."source-map-0.5.6" ]; }) - sources."resolve-1.2.0" + sources."resolve-1.3.2" sources."global-paths-0.1.2" sources."source-map-0.1.9" sources."xml2tss-0.0.5" - sources."moment-2.10.6" + sources."moment-2.17.1" sources."node.extend-1.0.10" sources."nomnom-1.8.1" sources."JSV-4.0.2" @@ -18673,10 +19294,22 @@ in sources."ansi-styles-1.0.0" sources."strip-ansi-0.1.1" sources."async-0.2.10" - sources."optimist-0.3.7" sources."uglify-to-browserify-1.0.2" - sources."amdefine-1.0.1" - sources."wordwrap-0.0.3" + sources."yargs-3.10.0" + sources."camelcase-1.2.1" + sources."cliui-2.1.0" + sources."decamelize-1.2.0" + sources."window-size-0.1.0" + sources."center-align-0.1.3" + sources."right-align-0.1.3" + sources."wordwrap-0.0.2" + sources."align-text-0.1.4" + sources."lazy-cache-1.0.4" + sources."kind-of-3.1.0" + sources."longest-1.0.1" + sources."repeat-string-1.6.1" + sources."is-buffer-1.1.4" + sources."path-parse-1.0.5" sources."array-unique-0.2.1" (sources."global-modules-0.2.3" // { dependencies = [ @@ -18694,6 +19327,7 @@ in sources."which-1.2.12" sources."parse-passwd-1.0.0" sources."isexe-1.1.2" + sources."amdefine-1.0.1" sources."xml2js-0.2.8" sources."sax-0.5.8" sources."is-0.3.0" @@ -18709,10 +19343,10 @@ in azure-cli = nodeEnv.buildNodePackage { name = "azure-cli"; packageName = "azure-cli"; - version = "0.10.9"; + version = "0.10.10"; src = fetchurl { - url = "https://registry.npmjs.org/azure-cli/-/azure-cli-0.10.9.tgz"; - sha1 = "f3f795f069c91fe7335d55f4199fc66c860496df"; + url = "https://registry.npmjs.org/azure-cli/-/azure-cli-0.10.10.tgz"; + sha1 = "f50fe398f935d7e8751b7e84dcf02616553fcfa4"; }; dependencies = [ sources."adal-node-0.1.21" @@ -18734,7 +19368,7 @@ in sources."azure-arm-insights-0.11.3" sources."azure-arm-iothub-0.1.4" sources."azure-arm-servermanagement-0.1.2" - sources."azure-arm-network-0.17.0" + sources."azure-arm-network-0.18.0" sources."azure-arm-powerbiembedded-0.1.0" sources."azure-arm-trafficmanager-0.10.5" sources."azure-arm-dns-0.11.1" @@ -18755,7 +19389,7 @@ in }) sources."azure-asm-network-0.13.0" sources."azure-arm-resource-1.6.1-preview" - sources."azure-arm-storage-0.13.1-preview" + sources."azure-arm-storage-0.15.0-preview" sources."azure-asm-sb-0.10.1" sources."azure-asm-sql-0.10.1" sources."azure-asm-storage-0.12.0" @@ -18765,7 +19399,7 @@ in sources."moment-2.14.1" ]; }) - (sources."azure-storage-1.3.0" // { + (sources."azure-storage-2.0.0" // { dependencies = [ sources."readable-stream-2.0.6" sources."validator-3.22.2" @@ -18788,21 +19422,21 @@ in sources."jsonlint-1.6.2" sources."jsonminify-0.4.1" sources."jsrsasign-4.8.2" - (sources."kuduscript-1.0.9" // { + (sources."kuduscript-1.0.13" // { dependencies = [ sources."commander-1.1.1" sources."streamline-0.4.11" ]; }) sources."moment-2.17.1" - sources."ms-rest-1.15.4" - (sources."ms-rest-azure-1.15.4" // { + sources."ms-rest-1.15.5" + (sources."ms-rest-azure-1.15.5" // { dependencies = [ sources."async-0.2.7" ]; }) sources."node-forge-0.6.23" - sources."omelette-0.1.0" + sources."omelette-0.3.2" sources."openssl-wrapper-0.2.1" sources."progress-1.1.8" (sources."prompt-0.2.14" // { @@ -18865,12 +19499,14 @@ in sources."envconf-0.0.4" sources."duplexer-0.1.1" sources."sax-0.5.2" - sources."extend-1.2.1" sources."browserify-mime-1.2.9" + sources."extend-1.2.1" sources."json-edm-parser-0.1.2" + sources."md5.js-1.3.4" sources."jsonparse-1.2.0" - sources."core-util-is-1.0.2" + sources."hash-base-3.0.3" sources."inherits-2.0.3" + sources."core-util-is-1.0.2" sources."isarray-1.0.0" sources."process-nextick-args-1.0.7" sources."string_decoder-0.10.31" @@ -18905,7 +19541,7 @@ in sources."i-0.3.5" sources."mkdirp-0.5.1" sources."ncp-0.4.2" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."minimist-0.0.8" sources."glob-7.1.1" sources."fs.realpath-1.0.0" @@ -18931,7 +19567,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - sources."async-2.1.4" + sources."async-2.1.5" ]; }) (sources."har-validator-2.0.6" // { @@ -18948,13 +19584,13 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" sources."delayed-stream-1.0.0" sources."lodash-4.17.4" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."escape-string-regexp-1.0.5" sources."has-ansi-2.0.0" @@ -19006,7 +19642,7 @@ in sources."amdefine-1.0.1" (sources."concat-stream-1.6.0" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" ]; }) sources."http-response-object-1.1.0" @@ -19097,7 +19733,7 @@ in sources."timed-out-2.0.0" sources."end-of-stream-1.0.0" sources."inherits-2.0.3" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."stream-shift-1.0.0" sources."once-1.3.3" sources."wrappy-1.0.2" @@ -19168,7 +19804,7 @@ in ]; }) sources."path-is-absolute-1.0.1" - (sources."rimraf-2.5.4" // { + (sources."rimraf-2.6.1" // { dependencies = [ sources."glob-7.1.1" ]; @@ -19200,13 +19836,13 @@ in browserify = nodeEnv.buildNodePackage { name = "browserify"; packageName = "browserify"; - version = "14.0.0"; + version = "14.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/browserify/-/browserify-14.0.0.tgz"; - sha1 = "67e6cfe7acb2fb1a1908e8a763452306de0bcf38"; + url = "https://registry.npmjs.org/browserify/-/browserify-14.1.0.tgz"; + sha1 = "0508cc1e7bf4c152312c2fa523e676c0b0b92311"; }; dependencies = [ - sources."JSONStream-1.3.0" + sources."JSONStream-1.3.1" sources."assert-1.4.1" sources."browser-pack-6.0.2" (sources."browser-resolve-1.11.2" // { @@ -19216,7 +19852,7 @@ in }) sources."browserify-zlib-0.1.4" sources."buffer-5.0.5" - sources."cached-path-relative-1.0.0" + sources."cached-path-relative-1.0.1" (sources."concat-stream-1.5.2" // { dependencies = [ sources."readable-stream-2.0.6" @@ -19241,7 +19877,7 @@ in sources."isarray-0.0.1" ]; }) - sources."module-deps-4.0.8" + sources."module-deps-4.1.1" sources."os-browserify-0.1.2" sources."parents-1.0.1" sources."path-browserify-0.0.0" @@ -19249,8 +19885,8 @@ in sources."punycode-1.4.1" sources."querystring-es3-0.2.1" sources."read-only-stream-2.0.0" - sources."readable-stream-2.2.2" - sources."resolve-1.2.0" + sources."readable-stream-2.2.3" + sources."resolve-1.3.2" sources."shasum-1.0.2" sources."shell-quote-1.6.1" sources."stream-browserify-2.0.1" @@ -19312,10 +19948,12 @@ in sources."minimalistic-assert-1.0.0" sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - sources."elliptic-6.3.3" + sources."elliptic-6.4.0" sources."parse-asn1-5.0.0" - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" sources."asn1.js-4.9.1" sources."ripemd160-1.0.1" sources."sha.js-2.4.8" @@ -19343,6 +19981,7 @@ in sources."stream-combiner2-1.1.1" sources."path-platform-0.11.15" sources."buffer-shims-1.0.0" + sources."path-parse-1.0.5" sources."json-stable-stringify-0.0.1" sources."jsonify-0.0.0" sources."array-filter-0.0.1" @@ -19589,7 +20228,7 @@ in sources."ip-set-1.0.1" sources."mkdirp-0.3.5" sources."peer-wire-swarm-0.12.1" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."torrent-discovery-5.4.0" sources."torrent-piece-1.1.0" (sources."random-access-file-1.5.0" // { @@ -19650,21 +20289,21 @@ in sources."compact2string-1.4.0" sources."random-iterate-1.0.1" sources."run-series-1.1.4" - (sources."simple-peer-6.2.2" // { + (sources."simple-peer-6.4.3" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) - (sources."simple-websocket-4.3.0" // { + (sources."simple-websocket-4.3.1" // { dependencies = [ - sources."readable-stream-2.2.2" - sources."ws-2.0.3" + sources."readable-stream-2.2.3" + sources."ws-2.1.0" sources."isarray-1.0.0" ]; }) sources."string2compact-1.2.2" - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."ultron-1.0.2" ]; @@ -19710,7 +20349,7 @@ in sources."voc-0.5.0" (sources."concat-stream-1.6.0" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -19732,10 +20371,10 @@ in coffee-script = nodeEnv.buildNodePackage { name = "coffee-script"; packageName = "coffee-script"; - version = "1.12.3"; + version = "1.12.4"; src = fetchurl { - url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.3.tgz"; - sha1 = "de5f4b1b934a4e9f915c57acd7ad323f68f715db"; + url = "https://registry.npmjs.org/coffee-script/-/coffee-script-1.12.4.tgz"; + sha1 = "fe1bced97fe1fb3927b998f2b45616e0658be1ff"; }; buildInputs = globalBuildInputs; meta = { @@ -19774,7 +20413,7 @@ in dependencies = [ sources."async-1.5.2" sources."request-2.79.0" - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."nopt-3.0.1" @@ -19840,6 +20479,7 @@ in }) (sources."npm-2.15.11" // { dependencies = [ + sources."abbrev-1.0.9" sources."glob-7.0.6" sources."hosted-git-info-2.1.5" sources."nopt-3.0.6" @@ -19899,13 +20539,14 @@ in sources."interpret-1.0.1" sources."rechoir-0.6.2" sources."fs.realpath-1.0.0" - sources."resolve-1.2.0" + sources."resolve-1.3.2" + sources."path-parse-1.0.5" (sources."browserify-13.3.0" // { dependencies = [ sources."glob-7.1.1" ]; }) - sources."JSONStream-1.3.0" + sources."JSONStream-1.3.1" sources."assert-1.4.1" sources."browser-pack-6.0.2" (sources."browser-resolve-1.11.2" // { @@ -19920,7 +20561,7 @@ in sources."isarray-1.0.0" ]; }) - sources."cached-path-relative-1.0.0" + sources."cached-path-relative-1.0.1" (sources."concat-stream-1.5.2" // { dependencies = [ sources."readable-stream-2.0.6" @@ -19940,7 +20581,7 @@ in sources."https-browserify-0.0.1" sources."insert-module-globals-7.0.1" sources."labeled-stream-splicer-2.0.0" - sources."module-deps-4.0.8" + sources."module-deps-4.1.1" sources."os-browserify-0.1.2" sources."parents-1.0.1" sources."path-browserify-0.0.0" @@ -19948,7 +20589,7 @@ in sources."punycode-1.4.1" sources."querystring-es3-0.2.1" sources."read-only-stream-2.0.0" - (sources."readable-stream-2.2.2" // { + (sources."readable-stream-2.2.3" // { dependencies = [ sources."isarray-1.0.0" ]; @@ -20010,10 +20651,12 @@ in sources."minimalistic-assert-1.0.0" sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - sources."elliptic-6.3.3" + sources."elliptic-6.4.0" sources."parse-asn1-5.0.0" - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" sources."asn1.js-4.9.1" sources."ripemd160-1.0.1" sources."sha.js-2.4.8" @@ -20119,7 +20762,7 @@ in sources."spdx-expression-parse-1.0.4" sources."spdx-license-ids-1.2.2" sources."builtins-0.0.7" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."ansicolors-0.3.2" sources."ansistyles-0.1.3" sources."archy-1.0.0" @@ -20159,7 +20802,7 @@ in (sources."npm-registry-client-7.2.1" // { dependencies = [ sources."request-2.79.0" - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."npm-user-validate-0.1.5" @@ -20218,7 +20861,7 @@ in sources."delayed-stream-1.0.0" sources."asynckit-0.4.0" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."graceful-readlink-1.0.1" sources."generate-function-2.0.0" @@ -20273,7 +20916,7 @@ in ]; }) sources."node-uuid-1.4.7" - (sources."async-2.1.4" // { + (sources."async-2.1.5" // { dependencies = [ sources."lodash-4.17.4" ]; @@ -20345,9 +20988,9 @@ in ]; }) sources."stream-shift-1.0.0" - sources."rc-1.1.6" + sources."rc-1.1.7" sources."deep-extend-0.4.1" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."is-finite-1.0.2" ]; buildInputs = globalBuildInputs; @@ -20570,7 +21213,7 @@ in sources."minimist-1.2.0" sources."split2-2.1.1" sources."through2-2.0.3" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -20584,7 +21227,7 @@ in (sources."tar-stream-1.5.2" // { dependencies = [ sources."bl-1.2.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -20608,7 +21251,7 @@ in (sources."duplexify-3.5.0" // { dependencies = [ sources."end-of-stream-1.0.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -20675,8 +21318,8 @@ in sha1 = "4bec1f64f7931b84884306fb5b37a0d269d81e8d"; }; dependencies = [ - sources."JSONStream-1.3.0" - sources."async-2.1.4" + sources."JSONStream-1.3.1" + sources."async-2.1.5" sources."aws4-1.6.0" sources."awscred-1.2.0" sources."ini-1.3.4" @@ -20701,7 +21344,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -20710,7 +21353,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -20876,10 +21519,10 @@ in eslint = nodeEnv.buildNodePackage { name = "eslint"; packageName = "eslint"; - version = "3.15.0"; + version = "3.16.1"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-3.15.0.tgz"; - sha1 = "bdcc6a6c5ffe08160e7b93c066695362a91e30f2"; + url = "https://registry.npmjs.org/eslint/-/eslint-3.16.1.tgz"; + sha1 = "9bc31fc7341692cf772e80607508f67d711c5609"; }; dependencies = [ sources."babel-code-frame-6.22.0" @@ -20893,11 +21536,11 @@ in sources."esutils-2.0.2" sources."file-entry-cache-2.0.0" sources."glob-7.1.1" - sources."globals-9.14.0" - sources."ignore-3.2.2" + sources."globals-9.16.0" + sources."ignore-3.2.4" sources."imurmurhash-0.1.4" sources."inquirer-0.12.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."is-resolvable-1.0.0" sources."js-yaml-3.8.1" sources."json-stable-stringify-1.0.1" @@ -20930,7 +21573,7 @@ in sources."ansi-regex-2.1.1" sources."inherits-2.0.3" sources."typedarray-0.0.6" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -20968,7 +21611,7 @@ in sources."is-path-in-cwd-1.0.0" sources."pify-2.3.0" sources."pinkie-promise-2.0.1" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."array-union-1.0.2" sources."arrify-1.0.1" sources."array-uniq-1.0.3" @@ -21020,7 +21663,8 @@ in sources."callsites-0.2.0" sources."interpret-1.0.1" sources."rechoir-0.6.2" - sources."resolve-1.2.0" + sources."resolve-1.3.2" + sources."path-parse-1.0.5" sources."ajv-4.11.3" sources."ajv-keywords-1.5.1" sources."slice-ansi-0.0.4" @@ -21150,7 +21794,7 @@ in sources."is-binary-path-1.0.1" sources."is-glob-2.0.1" sources."readdirp-2.1.0" - sources."fsevents-1.0.17" + sources."fsevents-1.1.1" sources."arrify-1.0.1" sources."micromatch-2.3.11" sources."arr-diff-2.0.0" @@ -21177,16 +21821,16 @@ in sources."isarray-1.0.0" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" sources."glob-base-0.3.0" sources."is-dotfile-1.0.2" sources."is-equal-shallow-0.1.3" sources."is-primitive-2.0.0" sources."binary-extensions-1.8.0" sources."graceful-fs-4.1.11" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."set-immediate-shim-1.0.1" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -21202,7 +21846,7 @@ in }) sources."nopt-3.0.6" sources."npmlog-4.0.2" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -21217,7 +21861,7 @@ in sources."readable-stream-2.1.5" ]; }) - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" (sources."gauge-2.7.3" // { @@ -21239,7 +21883,7 @@ in sources."ansi-regex-2.1.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" @@ -21255,7 +21899,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -21264,7 +21908,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -21391,7 +22035,7 @@ in sources."brace-expansion-1.1.6" sources."balanced-match-0.4.2" sources."concat-map-0.0.1" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" ]; buildInputs = globalBuildInputs; meta = { @@ -21411,7 +22055,7 @@ in sha256 = "a51a5beef55c14c68630275d51cf66c44a4462d1b20c0f08aef6d88a62ca077c"; }; dependencies = [ - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" sources."jade-1.11.0" (sources."q-2.0.3" // { dependencies = [ @@ -21421,7 +22065,7 @@ in sources."xml2js-0.4.17" sources."msgpack-1.0.2" sources."character-parser-1.2.1" - (sources."clean-css-3.4.24" // { + (sources."clean-css-3.4.25" // { dependencies = [ sources."commander-2.8.1" ]; @@ -21547,7 +22191,7 @@ in sources."replace-ext-0.0.1" (sources."through2-2.0.3" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -21587,7 +22231,7 @@ in sources."lodash.isstring-4.0.1" sources."lodash.mapvalues-4.6.0" sources."rechoir-0.6.2" - sources."resolve-1.2.0" + sources."resolve-1.3.2" sources."detect-file-0.1.0" sources."is-glob-2.0.1" sources."micromatch-2.3.11" @@ -21620,9 +22264,9 @@ in sources."repeat-string-1.6.1" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" sources."glob-base-0.3.0" sources."is-dotfile-1.0.2" sources."glob-parent-2.0.0" @@ -21649,6 +22293,7 @@ in sources."is-unc-path-0.1.2" sources."unc-path-regex-0.1.2" sources."path-root-regex-0.1.2" + sources."path-parse-1.0.5" sources."end-of-stream-0.1.5" sources."sequencify-0.0.7" sources."stream-consume-0.1.0" @@ -22037,10 +22682,10 @@ in karma = nodeEnv.buildNodePackage { name = "karma"; packageName = "karma"; - version = "1.4.1"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/karma/-/karma-1.4.1.tgz"; - sha1 = "41981a71d54237606b0a3ea8c58c90773f41650e"; + url = "https://registry.npmjs.org/karma/-/karma-1.5.0.tgz"; + sha1 = "9c4c14f0400bef2c04c8e8e6bff59371025cc009"; }; dependencies = [ sources."bluebird-3.4.7" @@ -22052,12 +22697,7 @@ in sources."lodash-4.17.4" ]; }) - (sources."connect-3.5.0" // { - dependencies = [ - sources."debug-2.2.0" - sources."ms-0.7.1" - ]; - }) + sources."connect-3.6.0" sources."core-js-2.4.1" sources."di-0.0.1" sources."dom-serialize-2.2.1" @@ -22086,16 +22726,16 @@ in sources."optimist-0.6.1" sources."qjobs-1.1.5" sources."range-parser-1.2.0" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."safe-buffer-5.0.1" - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ sources."debug-2.3.3" sources."object-assign-4.1.0" ]; }) sources."source-map-0.5.6" - sources."tmp-0.0.28" + sources."tmp-0.0.31" sources."useragent-2.1.12" sources."bytes-2.4.0" sources."content-type-1.0.2" @@ -22123,7 +22763,7 @@ in sources."is-glob-2.0.1" sources."path-is-absolute-1.0.1" sources."readdirp-2.1.0" - sources."fsevents-1.0.17" + sources."fsevents-1.1.1" sources."arrify-1.0.1" sources."micromatch-2.3.11" sources."arr-diff-2.0.0" @@ -22150,15 +22790,15 @@ in sources."isarray-1.0.0" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" sources."glob-base-0.3.0" sources."is-dotfile-1.0.2" sources."is-equal-shallow-0.1.3" sources."is-primitive-2.0.0" sources."binary-extensions-1.8.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."set-immediate-shim-1.0.1" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22166,18 +22806,22 @@ in sources."string_decoder-0.10.31" sources."util-deprecate-1.0.2" sources."nan-2.5.1" - sources."node-pre-gyp-0.6.33" + (sources."node-pre-gyp-0.6.33" // { + dependencies = [ + sources."rimraf-2.5.4" + ]; + }) sources."mkdirp-0.5.1" sources."nopt-3.0.6" sources."npmlog-4.0.2" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; }) (sources."request-2.79.0" // { dependencies = [ - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."semver-5.3.0" @@ -22186,11 +22830,12 @@ in dependencies = [ sources."debug-2.2.0" sources."readable-stream-2.1.5" + sources."rimraf-2.5.4" sources."ms-0.7.1" ]; }) sources."minimist-0.0.8" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" @@ -22209,7 +22854,7 @@ in sources."ansi-regex-2.1.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" @@ -22232,7 +22877,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -22282,14 +22927,10 @@ in sources."once-1.3.3" sources."uid-number-0.0.6" sources."wrappy-1.0.2" - (sources."finalhandler-0.5.0" // { - dependencies = [ - sources."debug-2.2.0" - sources."ms-0.7.1" - ]; - }) + sources."finalhandler-1.0.0" sources."parseurl-1.3.1" sources."utils-merge-1.0.0" + sources."encodeurl-1.0.1" sources."escape-html-1.0.3" sources."custom-event-1.0.1" sources."ent-2.2.0" @@ -22303,7 +22944,7 @@ in sources."balanced-match-0.4.2" sources."concat-map-0.0.1" sources."wordwrap-0.0.3" - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -22318,7 +22959,7 @@ in sources."debug-2.3.3" ]; }) - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -22334,7 +22975,7 @@ in sources."accepts-1.3.3" sources."base64id-1.0.0" sources."engine.io-parser-1.3.2" - sources."ws-1.1.1" + sources."ws-1.1.2" sources."cookie-0.3.1" sources."negotiator-0.6.1" sources."after-0.8.2" @@ -22347,7 +22988,7 @@ in sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -22547,7 +23188,7 @@ in sources."through2-2.0.3" sources."vinyl-1.2.0" sources."vinyl-fs-2.4.4" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."xtend-4.0.1" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -22635,9 +23276,9 @@ in sources."repeat-string-1.6.1" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" (sources."glob-base-0.3.0" // { dependencies = [ sources."glob-parent-2.0.0" @@ -22652,7 +23293,7 @@ in sources."extend-shallow-2.0.1" sources."json-stable-stringify-1.0.1" sources."jsonify-0.0.0" - sources."convert-source-map-1.3.0" + sources."convert-source-map-1.4.0" sources."minimist-0.0.8" sources."is-utf8-0.2.1" sources."first-chunk-stream-1.0.0" @@ -22812,12 +23453,12 @@ in sources."once-1.4.0" sources."request-2.79.0" sources."retry-0.8.0" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."slide-1.1.6" sources."npmlog-3.1.2" sources."inherits-2.0.3" sources."typedarray-0.0.6" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -22848,7 +23489,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -22857,7 +23498,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -22933,7 +23574,7 @@ in sources."osenv-0.1.4" sources."uid-number-0.0.5" sources."proto-list-1.2.4" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" sources."block-stream-0.0.9" @@ -22975,7 +23616,7 @@ in sources."npmlog-4.0.2" sources."osenv-0.1.4" sources."request-2.79.0" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."semver-5.3.0" sources."tar-2.2.1" sources."which-1.2.12" @@ -22989,13 +23630,13 @@ in sources."balanced-match-0.4.2" sources."concat-map-0.0.1" sources."minimist-0.0.8" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" sources."set-blocking-2.0.0" sources."delegates-1.0.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -23030,7 +23671,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -23039,7 +23680,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -23115,14 +23756,19 @@ in }) sources."glob-5.0.15" sources."path-is-absolute-1.0.1" - sources."rc-1.1.6" + sources."rc-1.1.7" sources."semver-4.3.6" - sources."serve-favicon-2.3.2" + (sources."serve-favicon-2.4.0" // { + dependencies = [ + sources."etag-1.8.0" + sources."fresh-0.4.0" + ]; + }) sources."strong-data-uri-1.0.4" sources."v8-debug-0.7.7" sources."v8-profiler-5.6.5" sources."which-1.2.12" - sources."ws-1.1.1" + sources."ws-1.1.2" sources."yargs-3.32.0" sources."browser-launcher2-0.4.6" sources."minimist-1.2.0" @@ -23262,7 +23908,7 @@ in sources."concat-map-0.0.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."truncate-1.0.5" sources."nan-2.5.1" (sources."node-pre-gyp-0.6.33" // { @@ -23276,7 +23922,7 @@ in sources."npmlog-4.0.2" (sources."request-2.79.0" // { dependencies = [ - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."tar-2.2.1" @@ -23290,13 +23936,13 @@ in sources."glob-7.1.1" ]; }) - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" sources."set-blocking-2.0.0" sources."delegates-1.0.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -23332,7 +23978,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" sources."has-ansi-2.0.0" @@ -23408,7 +24054,7 @@ in sources."mkdirp-0.5.1" sources."nopt-3.0.6" sources."npmlog-4.0.2" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -23424,13 +24070,13 @@ in ]; }) sources."minimist-0.0.8" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" sources."set-blocking-2.0.0" sources."delegates-1.0.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -23451,7 +24097,7 @@ in sources."ansi-regex-2.1.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" @@ -23467,7 +24113,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -23476,7 +24122,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -23582,7 +24228,7 @@ in sources."is-glob-2.0.1" sources."path-is-absolute-1.0.1" sources."readdirp-2.1.0" - sources."fsevents-1.0.17" + sources."fsevents-1.1.1" sources."arrify-1.0.1" sources."micromatch-2.3.11" sources."arr-diff-2.0.0" @@ -23609,16 +24255,16 @@ in sources."isarray-1.0.0" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" sources."glob-base-0.3.0" sources."is-dotfile-1.0.2" sources."is-equal-shallow-0.1.3" sources."is-primitive-2.0.0" sources."binary-extensions-1.8.0" sources."graceful-fs-4.1.11" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."set-immediate-shim-1.0.1" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -23630,7 +24276,7 @@ in sources."mkdirp-0.5.1" sources."nopt-3.0.6" sources."npmlog-4.0.2" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -23647,7 +24293,7 @@ in ]; }) sources."minimist-0.0.8" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" @@ -23666,7 +24312,7 @@ in sources."ansi-regex-2.1.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" @@ -23682,7 +24328,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -23691,7 +24337,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -23877,12 +24523,12 @@ in sources."ws-1.1.1" sources."xml2js-0.4.17" sources."node-red-node-feedparser-0.1.7" - sources."node-red-node-email-0.1.16" + sources."node-red-node-email-0.1.21" (sources."node-red-node-twitter-0.1.9" // { dependencies = [ sources."request-2.79.0" sources."form-data-2.1.2" - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."node-red-node-rbe-0.1.6" @@ -23930,7 +24576,7 @@ in sources."nth-check-1.0.1" sources."domelementtype-1.3.0" sources."domhandler-2.3.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -23974,7 +24620,7 @@ in sources."klaw-1.3.1" sources."async-0.1.22" sources."retry-0.6.1" - sources."cookies-0.6.2" + sources."cookies-0.7.0" sources."i18next-client-1.10.3" sources."json5-0.2.0" sources."keygrip-1.0.1" @@ -24057,9 +24703,9 @@ in sources."repeat-string-1.6.1" sources."is-posix-bracket-0.1.1" sources."is-buffer-1.1.4" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" (sources."glob-base-0.3.0" // { dependencies = [ sources."glob-parent-2.0.0" @@ -24082,7 +24728,7 @@ in ]; }) sources."stream-shift-1.0.0" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."uid2-0.0.3" sources."passport-strategy-1.0.0" sources."pause-0.0.1" @@ -24126,7 +24772,7 @@ in sources."forever-agent-0.6.1" (sources."form-data-1.0.1" // { dependencies = [ - sources."async-2.1.4" + sources."async-2.1.5" ]; }) sources."har-validator-2.0.6" @@ -24142,7 +24788,7 @@ in sources."delayed-stream-1.0.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -24238,7 +24884,7 @@ in dependencies = [ sources."request-2.79.0" sources."form-data-2.1.2" - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) (sources."mkdirp-0.5.1" // { @@ -24247,7 +24893,7 @@ in ]; }) sources."npmlog-4.0.2" - sources."rc-1.1.6" + sources."rc-1.1.7" (sources."rimraf-2.5.4" // { dependencies = [ sources."glob-7.1.1" @@ -24275,7 +24921,7 @@ in sources."number-is-nan-1.0.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."fs.realpath-1.0.0" sources."block-stream-0.0.9" sources."fstream-1.0.10" @@ -24354,7 +25000,7 @@ in sources."bytes-0.2.0" sources."pause-0.0.1" sources."mime-1.2.6" - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" sources."vows-0.8.1" sources."eyes-0.1.8" sources."diff-1.0.8" @@ -24419,18 +25065,18 @@ in npm = nodeEnv.buildNodePackage { name = "npm"; packageName = "npm"; - version = "4.2.0"; + version = "4.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/npm/-/npm-4.2.0.tgz"; - sha1 = "d4eeb6791b996fe3085535d749338d1fe48df13a"; + url = "https://registry.npmjs.org/npm/-/npm-4.3.0.tgz"; + sha1 = "78e97142408c8383bff10a0e4036e9f77f00ce28"; }; dependencies = [ - sources."JSONStream-1.3.0" + sources."JSONStream-1.3.1" sources."abbrev-1.0.9" sources."ansi-regex-2.1.1" sources."ansicolors-0.3.2" sources."ansistyles-0.1.3" - sources."aproba-1.0.4" + sources."aproba-1.1.1" sources."archy-1.0.0" sources."asap-2.0.5" sources."chownr-1.0.1" @@ -24446,7 +25092,7 @@ in sources."glob-7.1.1" sources."graceful-fs-4.1.11" sources."has-unicode-2.0.1" - sources."hosted-git-info-2.1.5" + sources."hosted-git-info-2.2.0" sources."iferr-0.1.5" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -24456,6 +25102,7 @@ in sources."glob-6.0.4" ]; }) + sources."lazy-property-1.0.0" sources."lockfile-1.0.3" sources."lodash._baseuniq-4.6.0" sources."lodash.clonedeep-4.5.0" @@ -24479,7 +25126,7 @@ in sources."npm-user-validate-0.1.5" sources."npmlog-4.0.2" sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" sources."osenv-0.1.4" sources."path-is-inside-1.0.2" sources."read-1.0.7" @@ -24491,7 +25138,7 @@ in ]; }) sources."read-package-tree-5.1.5" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."realize-package-specifier-3.0.3" sources."request-2.79.0" sources."retry-0.10.1" @@ -24610,7 +25257,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -24618,7 +25265,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -24716,7 +25363,7 @@ in }) sources."fs.extra-1.3.2" sources."findit-1.2.0" - sources."coffee-script-1.12.3" + sources."coffee-script-1.12.4" sources."underscore-1.4.4" sources."underscore.string-2.3.3" sources."request-2.79.0" @@ -24724,7 +25371,7 @@ in sources."slide-1.1.6" sources."chownr-0.0.2" sources."mkdirp-0.3.5" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."retry-0.6.0" sources."couch-login-0.1.20" sources."npmlog-4.0.2" @@ -24743,7 +25390,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -24752,7 +25399,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -24815,7 +25462,7 @@ in sources."gauge-2.7.3" sources."set-blocking-2.0.0" sources."delegates-1.0.0" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -24840,7 +25487,7 @@ in sources."nopt-2.2.1" sources."ini-1.1.0" sources."proto-list-1.2.4" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."block-stream-0.0.9" (sources."fstream-0.1.31" // { dependencies = [ @@ -24870,10 +25517,10 @@ in npm-check-updates = nodeEnv.buildNodePackage { name = "npm-check-updates"; packageName = "npm-check-updates"; - version = "2.10.2"; + version = "2.10.3"; src = fetchurl { - url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-2.10.2.tgz"; - sha1 = "9614c58ec84d31702a85881c844c3fb93611a585"; + url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-2.10.3.tgz"; + sha1 = "40540278e81e60e2f28df3bc79bf77e157f95555"; }; dependencies = [ sources."bluebird-3.4.7" @@ -24969,7 +25616,7 @@ in ]; }) sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" sources."osenv-0.1.4" sources."path-is-inside-1.0.2" sources."read-1.0.7" @@ -25049,7 +25696,7 @@ in sources."builtin-modules-1.1.1" (sources."concat-stream-1.6.0" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" ]; }) sources."typedarray-0.0.6" @@ -25084,13 +25731,13 @@ in sources."mime-types-2.1.14" sources."node-uuid-1.4.7" sources."oauth-sign-0.8.2" - sources."qs-6.2.1" + sources."qs-6.2.2" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" sources."delayed-stream-1.0.0" sources."asynckit-0.4.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."generate-function-2.0.0" sources."generate-object-property-1.2.0" sources."jsonpointer-4.0.1" @@ -25172,13 +25819,13 @@ in sources."error-ex-1.3.0" sources."is-arrayish-0.2.1" sources."prepend-http-1.0.4" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; }) sources."deep-extend-0.4.1" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" ]; buildInputs = globalBuildInputs; meta = { @@ -25241,12 +25888,17 @@ in sources."prfun-2.1.4" (sources."request-2.79.0" // { dependencies = [ - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."semver-5.3.0" - sources."serve-favicon-2.3.2" - (sources."service-runner-2.1.15" // { + (sources."serve-favicon-2.4.0" // { + dependencies = [ + sources."etag-1.8.0" + sources."fresh-0.4.0" + ]; + }) + (sources."service-runner-2.2.4" // { dependencies = [ sources."gelf-stream-1.1.1" sources."yargs-6.6.0" @@ -25400,7 +26052,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -25450,12 +26102,13 @@ in sources."bunyan-1.8.5" sources."bunyan-syslog-udp-0.1.0" sources."hot-shots-4.3.1" - (sources."limitation-0.1.9" // { + (sources."limitation-0.2.0" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) + sources."dnscache-1.0.1" sources."dtrace-provider-0.8.0" sources."mv-2.1.1" sources."safe-json-stringify-1.0.3" @@ -25474,14 +26127,14 @@ in sources."hat-0.0.3" (sources."kad-fs-0.0.4" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) sources."kad-localstorage-0.0.7" (sources."kad-memstore-0.0.1" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -25489,7 +26142,7 @@ in sources."merge-1.2.0" (sources."msgpack5-3.4.1" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -25499,7 +26152,7 @@ in sources."dom-storage-2.0.2" (sources."bl-1.2.0" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."isarray-1.0.0" ]; }) @@ -25542,6 +26195,8 @@ in sources."code-point-at-1.1.0" sources."is-fullwidth-code-point-1.0.0" sources."number-is-nan-1.0.1" + sources."lodash.clone-4.3.2" + sources."lodash._baseclone-4.5.7" sources."lodash.assign-4.2.0" ]; buildInputs = globalBuildInputs; @@ -25585,7 +26240,7 @@ in }) sources."pump-1.0.2" sources."range-parser-1.2.0" - sources."rc-1.1.6" + sources."rc-1.1.7" (sources."torrent-stream-1.0.3" // { dependencies = [ sources."end-of-stream-0.1.5" @@ -25614,7 +26269,7 @@ in sources."big-integer-1.6.17" sources."inherits-2.0.3" sources."typedarray-0.0.6" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" sources."isarray-1.0.0" @@ -25732,7 +26387,7 @@ in }) sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."bitfield-0.1.0" sources."bncode-0.5.3" (sources."fs-chunk-store-1.6.4" // { @@ -25747,7 +26402,7 @@ in sources."ip-set-1.0.1" sources."mkdirp-0.3.5" sources."peer-wire-swarm-0.12.1" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."torrent-discovery-5.4.0" sources."torrent-piece-1.1.0" (sources."random-access-file-1.5.0" // { @@ -25806,14 +26461,14 @@ in sources."compact2string-1.4.0" sources."random-iterate-1.0.1" sources."run-series-1.1.4" - sources."simple-peer-6.2.2" - (sources."simple-websocket-4.3.0" // { + sources."simple-peer-6.4.3" + (sources."simple-websocket-4.3.1" // { dependencies = [ - sources."ws-2.0.3" + sources."ws-2.1.0" ]; }) sources."string2compact-1.2.2" - (sources."ws-1.1.1" // { + (sources."ws-1.1.2" // { dependencies = [ sources."ultron-1.0.2" ]; @@ -25853,7 +26508,7 @@ in sources."pump-1.0.2" sources."range-parser-1.2.0" sources."read-torrent-1.3.0" - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -25990,7 +26645,7 @@ in sources."boom-0.3.8" sources."cryptiles-0.1.3" sources."sntp-0.1.4" - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ sources."debug-2.3.3" sources."cookie-0.3.1" @@ -26003,7 +26658,7 @@ in sources."debug-2.3.3" ]; }) - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -26025,7 +26680,7 @@ in }) sources."base64id-1.0.0" sources."engine.io-parser-1.3.2" - sources."ws-1.1.1" + sources."ws-1.1.2" sources."after-0.8.2" sources."arraybuffer.slice-0.0.6" sources."base64-arraybuffer-0.1.5" @@ -26036,7 +26691,7 @@ in sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."debug-2.3.3" ]; @@ -26077,7 +26732,7 @@ in }) sources."peer-wire-swarm-0.9.2" sources."random-access-file-0.3.2" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."thunky-0.1.0" sources."addr-to-ip-port-1.4.2" sources."buffer-equal-0.0.1" @@ -26160,7 +26815,7 @@ in sources."jsonfile-2.4.0" sources."klaw-1.3.1" sources."path-is-absolute-1.0.1" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."glob-7.1.1" sources."fs.realpath-1.0.0" sources."inflight-1.0.6" @@ -26193,7 +26848,7 @@ in sources."isstream-0.1.2" sources."is-typedarray-1.0.0" sources."har-validator-2.0.6" - sources."async-2.1.4" + sources."async-2.1.5" sources."lodash-4.17.4" sources."mime-db-1.26.0" sources."assert-plus-0.2.0" @@ -26229,7 +26884,7 @@ in sources."delayed-stream-1.0.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" sources."has-ansi-2.0.0" @@ -26276,7 +26931,7 @@ in sources."mkdirp-0.5.1" sources."private-0.1.7" sources."q-1.4.1" - sources."recast-0.11.21" + sources."recast-0.11.22" sources."graceful-readlink-1.0.1" sources."acorn-3.3.0" sources."defined-1.0.0" @@ -26377,7 +27032,7 @@ in (sources."openid-2.0.6" // { dependencies = [ sources."request-2.79.0" - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."node-swt-0.1.1" @@ -26410,7 +27065,7 @@ in sources."delayed-stream-1.0.0" sources."asynckit-0.4.0" sources."chalk-1.1.3" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -26495,6 +27150,7 @@ in dependencies = [ sources."bytes-2.4.0" sources."debug-2.6.1" + sources."http-errors-1.5.1" sources."iconv-lite-0.4.15" sources."qs-6.2.1" sources."raw-body-2.2.0" @@ -26508,10 +27164,10 @@ in }) sources."commander-2.9.0" sources."js-yaml-3.8.1" - sources."cookies-0.6.2" + sources."cookies-0.7.0" (sources."request-2.79.0" // { dependencies = [ - sources."qs-6.3.0" + sources."qs-6.3.1" ]; }) sources."async-0.9.2" @@ -26524,10 +27180,14 @@ in sources."lunr-0.7.2" sources."render-readme-1.3.1" sources."jju-1.3.0" - sources."JSONStream-1.3.0" + sources."JSONStream-1.3.1" sources."mkdirp-0.5.1" sources."sinopia-htpasswd-0.4.5" - sources."http-errors-1.5.1" + (sources."http-errors-1.6.1" // { + dependencies = [ + sources."setprototypeof-1.0.3" + ]; + }) (sources."readable-stream-1.1.14" // { dependencies = [ sources."isarray-0.0.1" @@ -26560,6 +27220,7 @@ in sources."router-1.1.5" (sources."send-0.14.2" // { dependencies = [ + sources."http-errors-1.5.1" sources."ms-0.7.2" ]; }) @@ -26579,6 +27240,7 @@ in sources."setprototypeof-1.0.2" sources."destroy-1.0.4" sources."mime-1.3.4" + sources."inherits-2.0.3" sources."media-typer-0.3.0" sources."raw-body-1.3.4" sources."bytes-1.0.0" @@ -26611,7 +27273,7 @@ in sources."delayed-stream-1.0.0" sources."asynckit-0.4.0" sources."chalk-1.1.3" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -26671,7 +27333,6 @@ in ]; }) sources."inflight-1.0.6" - sources."inherits-2.0.3" sources."once-1.4.0" sources."wrappy-1.0.2" sources."brace-expansion-1.1.6" @@ -26694,7 +27355,7 @@ in sources."uc.micro-1.0.3" (sources."htmlparser2-3.9.2" // { dependencies = [ - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" ]; }) sources."regexp-quote-0.0.0" @@ -26736,7 +27397,7 @@ in sha1 = "b42d3da1a442a489f454c32c628e8ebf0007875c"; }; dependencies = [ - sources."async-2.1.4" + sources."async-2.1.5" sources."cli-table-0.3.1" sources."commander-2.9.0" sources."readdirp-2.1.0" @@ -26745,7 +27406,7 @@ in sources."graceful-readlink-1.0.1" sources."graceful-fs-4.1.11" sources."minimatch-3.0.3" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."set-immediate-shim-1.0.1" sources."brace-expansion-1.1.6" sources."balanced-match-0.4.2" @@ -26823,7 +27484,7 @@ in sources."extsprintf-1.0.0" ]; }) - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."backoff-2.5.0" sources."csv-0.4.6" sources."escape-regexp-component-1.0.2" @@ -26888,7 +27549,7 @@ in ]; }) sources."json-schema-0.2.3" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."buffer-shims-1.0.0" sources."isarray-1.0.0" sources."process-nextick-args-1.0.7" @@ -26985,27 +27646,23 @@ in tern = nodeEnv.buildNodePackage { name = "tern"; packageName = "tern"; - version = "0.20.0"; + version = "0.21.0"; src = fetchurl { - url = "https://registry.npmjs.org/tern/-/tern-0.20.0.tgz"; - sha1 = "5058e1ae15a121a1f421500ced0c852c11e6fb34"; + url = "https://registry.npmjs.org/tern/-/tern-0.21.0.tgz"; + sha1 = "809c87a826e112494398cf8894f7c2d1b3464eb7"; }; dependencies = [ - sources."acorn-3.3.0" + sources."acorn-4.0.11" sources."enhanced-resolve-2.3.0" - (sources."glob-3.2.11" // { - dependencies = [ - sources."minimatch-0.3.0" - ]; - }) - sources."minimatch-0.2.14" + sources."glob-7.1.1" + sources."minimatch-3.0.3" sources."resolve-from-2.0.0" sources."tapable-0.2.6" sources."memory-fs-0.3.0" sources."graceful-fs-4.1.11" sources."object-assign-4.1.1" sources."errno-0.1.4" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."prr-0.0.0" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -27014,8 +27671,14 @@ in sources."process-nextick-args-1.0.7" sources."string_decoder-0.10.31" sources."util-deprecate-1.0.2" - sources."lru-cache-2.7.3" - sources."sigmund-1.0.1" + sources."fs.realpath-1.0.0" + sources."inflight-1.0.6" + sources."once-1.4.0" + sources."path-is-absolute-1.0.1" + sources."wrappy-1.0.2" + sources."brace-expansion-1.1.6" + sources."balanced-match-0.4.2" + sources."concat-map-0.0.1" ]; buildInputs = globalBuildInputs; meta = { @@ -27055,7 +27718,7 @@ in (sources."request-2.78.0" // { dependencies = [ sources."form-data-2.1.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."tough-cookie-2.3.2" ]; }) @@ -27103,7 +27766,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.0.2" + sources."qs-6.0.3" sources."stringstream-0.0.5" sources."tough-cookie-2.2.2" sources."tunnel-agent-0.4.3" @@ -27117,7 +27780,7 @@ in sources."delayed-stream-1.0.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -27201,10 +27864,10 @@ in typescript = nodeEnv.buildNodePackage { name = "typescript"; packageName = "typescript"; - version = "2.1.6"; + version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-2.1.6.tgz"; - sha1 = "40c7e6e9e5da7961b7718b55505f9cac9487a607"; + url = "https://registry.npmjs.org/typescript/-/typescript-2.2.1.tgz"; + sha1 = "4862b662b988a4c8ff691cc7969622d24db76ae9"; }; buildInputs = globalBuildInputs; meta = { @@ -27252,13 +27915,13 @@ in ungit = nodeEnv.buildNodePackage { name = "ungit"; packageName = "ungit"; - version = "1.1.7"; + version = "1.1.8"; src = fetchurl { - url = "https://registry.npmjs.org/ungit/-/ungit-1.1.7.tgz"; - sha1 = "eb4ba66b38ec553396fe21ec338181b88c72bf4b"; + url = "https://registry.npmjs.org/ungit/-/ungit-1.1.8.tgz"; + sha1 = "1519b78475ef5162ef3342c2046889b396add651"; }; dependencies = [ - sources."async-2.1.4" + sources."async-2.1.5" sources."bluebird-3.4.7" sources."blueimp-md5-2.6.0" sources."body-parser-1.15.2" @@ -27271,7 +27934,7 @@ in sources."forever-monitor-1.1.0" sources."getmac-1.2.1" sources."hasher-1.2.0" - sources."ignore-3.2.2" + sources."ignore-3.2.4" sources."keen.io-0.1.3" sources."knockout-3.4.1" sources."lodash-4.17.4" @@ -27281,8 +27944,10 @@ in ]; }) sources."moment-2.17.1" + sources."node-cache-4.1.1" (sources."npm-4.1.2" // { dependencies = [ + sources."abbrev-1.0.9" sources."nopt-4.0.1" sources."request-2.79.0" sources."combined-stream-1.0.5" @@ -27291,7 +27956,7 @@ in sources."hawk-3.1.3" sources."json-stringify-safe-5.0.1" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."tunnel-agent-0.4.3" sources."delayed-stream-1.0.0" sources."hoek-2.16.3" @@ -27309,7 +27974,7 @@ in sources."hawk-3.1.3" sources."json-stringify-safe-5.0.1" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."tunnel-agent-0.4.3" sources."delayed-stream-1.0.0" sources."hoek-2.16.3" @@ -27329,7 +27994,7 @@ in sources."uuid-3.0.0" ]; }) - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -27339,7 +28004,7 @@ in sources."serve-static-1.11.2" sources."signals-1.0.0" sources."snapsvg-0.4.0" - (sources."socket.io-1.7.2" // { + (sources."socket.io-1.7.3" // { dependencies = [ sources."debug-2.3.3" sources."object-assign-4.1.0" @@ -27391,7 +28056,7 @@ in sources."mime-types-2.1.14" sources."mime-db-1.26.0" sources."color-convert-1.9.0" - sources."color-string-1.4.0" + sources."color-string-1.5.0" sources."color-name-1.1.1" sources."simple-swizzle-0.2.2" sources."is-arrayish-0.3.1" @@ -27405,7 +28070,7 @@ in }) sources."whatwg-fetch-2.0.2" sources."nopt-1.0.10" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."accepts-1.3.3" sources."array-flatten-1.1.1" sources."content-disposition-0.5.2" @@ -27515,7 +28180,8 @@ in sources."editions-1.3.3" sources."typechecker-4.4.1" sources."underscore-1.5.2" - sources."JSONStream-1.3.0" + sources."clone-2.1.0" + sources."JSONStream-1.3.1" sources."ansicolors-0.3.2" sources."ansistyles-0.1.3" sources."aproba-1.0.4" @@ -27568,7 +28234,7 @@ in sources."npm-user-validate-0.1.5" sources."npmlog-4.0.2" sources."once-1.4.0" - sources."opener-1.4.2" + sources."opener-1.4.3" sources."osenv-0.1.4" sources."path-is-inside-1.0.2" sources."read-1.0.7" @@ -27581,7 +28247,7 @@ in ]; }) sources."read-package-tree-5.1.5" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."realize-package-specifier-3.0.3" sources."retry-0.10.1" sources."sha-2.0.1" @@ -27619,8 +28285,11 @@ in sources."jsonparse-1.3.0" sources."through-2.3.8" sources."wcwidth-1.0.1" - sources."defaults-1.0.3" - sources."clone-1.0.2" + (sources."defaults-1.0.3" // { + dependencies = [ + sources."clone-1.0.2" + ]; + }) sources."proto-list-1.2.4" (sources."fstream-ignore-1.0.5" // { dependencies = [ @@ -27694,7 +28363,7 @@ in sources."asynckit-0.4.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -27745,9 +28414,9 @@ in sources."pause-0.0.1" sources."lsmod-1.0.0" sources."deep-extend-0.4.1" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."eve-0.4.2" - (sources."engine.io-1.8.2" // { + (sources."engine.io-1.8.3" // { dependencies = [ sources."debug-2.3.3" sources."ms-0.7.2" @@ -27764,7 +28433,7 @@ in sources."ms-0.7.2" ]; }) - (sources."socket.io-client-1.7.2" // { + (sources."socket.io-client-1.7.3" // { dependencies = [ sources."debug-2.3.3" sources."ms-0.7.2" @@ -27778,7 +28447,7 @@ in }) sources."base64id-1.0.0" sources."engine.io-parser-1.3.2" - sources."ws-1.1.1" + sources."ws-1.1.2" sources."after-0.8.2" sources."arraybuffer.slice-0.0.6" sources."base64-arraybuffer-0.1.5" @@ -27789,7 +28458,7 @@ in sources."backo2-1.0.2" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" - (sources."engine.io-client-1.8.2" // { + (sources."engine.io-client-1.8.3" // { dependencies = [ sources."debug-2.3.3" sources."ms-0.7.2" @@ -27881,7 +28550,7 @@ in sources."ini-1.1.0" sources."proto-list-1.2.4" sources."wrappy-1.0.2" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" (sources."extract-zip-1.5.0" // { dependencies = [ sources."mkdirp-0.5.0" @@ -27910,7 +28579,7 @@ in sources."jsonfile-2.4.0" sources."klaw-1.3.1" sources."path-is-absolute-1.0.1" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."glob-7.1.1" sources."fs.realpath-1.0.0" sources."inflight-1.0.6" @@ -27941,7 +28610,7 @@ in sources."isstream-0.1.2" sources."is-typedarray-1.0.0" sources."har-validator-2.0.6" - sources."async-2.1.4" + sources."async-2.1.5" sources."lodash-4.17.4" sources."mime-db-1.26.0" sources."assert-plus-0.2.0" @@ -27977,7 +28646,7 @@ in sources."delayed-stream-1.0.0" sources."chalk-1.1.3" sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" sources."has-ansi-2.0.0" @@ -28016,12 +28685,12 @@ in sources."acorn-dynamic-import-2.0.1" sources."ajv-4.11.3" sources."ajv-keywords-1.5.1" - sources."async-2.1.4" + sources."async-2.1.5" sources."enhanced-resolve-3.1.0" sources."interpret-1.0.1" sources."json-loader-0.5.4" sources."loader-runner-2.3.0" - sources."loader-utils-0.2.16" + sources."loader-utils-0.2.17" sources."memory-fs-0.4.1" sources."mkdirp-0.5.1" sources."node-libs-browser-2.0.0" @@ -28034,7 +28703,7 @@ in sources."yargs-3.10.0" ]; }) - sources."watchpack-1.2.0" + sources."watchpack-1.3.1" sources."webpack-sources-0.1.4" (sources."yargs-6.6.0" // { dependencies = [ @@ -28052,7 +28721,7 @@ in sources."emojis-list-2.1.0" sources."json5-0.5.1" sources."errno-0.1.4" - sources."readable-stream-2.2.2" + sources."readable-stream-2.2.3" sources."prr-0.0.0" sources."buffer-shims-1.0.0" sources."core-util-is-1.0.2" @@ -28113,10 +28782,12 @@ in sources."minimalistic-assert-1.0.0" sources."bn.js-4.11.6" sources."browserify-rsa-4.0.1" - sources."elliptic-6.3.3" + sources."elliptic-6.4.0" sources."parse-asn1-5.0.0" - sources."brorand-1.0.7" + sources."brorand-1.1.0" sources."hash.js-1.0.3" + sources."hmac-drbg-1.0.0" + sources."minimalistic-crypto-utils-1.0.1" sources."asn1.js-4.9.1" sources."ripemd160-1.0.1" sources."sha.js-2.4.8" @@ -28150,7 +28821,7 @@ in sources."is-glob-2.0.1" sources."path-is-absolute-1.0.1" sources."readdirp-2.1.0" - sources."fsevents-1.0.17" + sources."fsevents-1.1.1" sources."arrify-1.0.1" sources."micromatch-2.3.11" sources."arr-diff-2.0.0" @@ -28173,9 +28844,9 @@ in sources."isobject-2.1.0" sources."randomatic-1.1.6" sources."is-posix-bracket-0.1.1" - sources."for-own-0.1.4" + sources."for-own-0.1.5" sources."is-extendable-0.1.1" - sources."for-in-0.1.6" + sources."for-in-1.0.1" sources."glob-base-0.3.0" sources."is-dotfile-1.0.2" sources."is-equal-shallow-0.1.3" @@ -28190,7 +28861,7 @@ in sources."node-pre-gyp-0.6.33" sources."nopt-3.0.6" sources."npmlog-4.0.2" - (sources."rc-1.1.6" // { + (sources."rc-1.1.7" // { dependencies = [ sources."minimist-1.2.0" ]; @@ -28205,7 +28876,7 @@ in sources."readable-stream-2.1.5" ]; }) - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" sources."gauge-2.7.3" @@ -28223,7 +28894,7 @@ in sources."ansi-regex-2.1.1" sources."deep-extend-0.4.1" sources."ini-1.3.4" - sources."strip-json-comments-1.0.4" + sources."strip-json-comments-2.0.1" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" @@ -28239,7 +28910,7 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" @@ -28252,7 +28923,7 @@ in ]; }) sources."commander-2.9.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" sources."pinkie-promise-2.0.1" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" @@ -28368,13 +29039,13 @@ in yarn = nodeEnv.buildNodePackage { name = "yarn"; packageName = "yarn"; - version = "0.19.1"; + version = "0.20.4"; src = fetchurl { - url = "https://registry.npmjs.org/yarn/-/yarn-0.19.1.tgz"; - sha1 = "102ca03ce7fc910a73f719c70bba9e9f9e3b2b4d"; + url = "https://registry.npmjs.org/yarn/-/yarn-0.20.4.tgz"; + sha1 = "575190fee60a27a54d4125a0f7579fc702f01229"; }; dependencies = [ - sources."babel-runtime-6.22.0" + sources."babel-runtime-6.23.0" sources."bytes-2.4.0" sources."camelcase-3.0.0" sources."chalk-1.1.3" @@ -28383,35 +29054,34 @@ in sources."death-1.1.0" sources."debug-2.6.1" sources."defaults-1.0.3" - sources."detect-indent-4.0.0" + sources."detect-indent-5.0.0" sources."diff-2.2.3" sources."ini-1.3.4" - sources."inquirer-1.2.3" + sources."inquirer-3.0.5" sources."invariant-2.2.2" sources."is-builtin-module-1.0.0" sources."is-ci-1.0.10" - sources."leven-2.0.0" + sources."leven-2.1.0" sources."loud-rejection-1.6.0" sources."minimatch-3.0.3" sources."mkdirp-0.5.1" sources."node-emoji-1.5.1" sources."node-gyp-3.5.0" - sources."object-path-0.11.3" + sources."object-path-0.11.4" sources."proper-lockfile-2.0.0" sources."read-1.0.7" - sources."repeating-2.0.1" sources."request-2.79.0" sources."request-capture-har-1.1.4" - sources."rimraf-2.5.4" + sources."rimraf-2.6.1" sources."roadrunner-1.1.0" sources."semver-5.3.0" - sources."strip-bom-2.0.0" + sources."strip-bom-3.0.0" sources."tar-2.2.1" sources."tar-stream-1.5.2" sources."user-home-2.0.0" sources."validate-npm-package-license-3.0.1" sources."core-js-2.4.1" - sources."regenerator-runtime-0.10.1" + sources."regenerator-runtime-0.10.3" sources."ansi-styles-2.2.1" sources."escape-string-regexp-1.0.5" sources."has-ansi-2.0.0" @@ -28423,47 +29093,29 @@ in sources."ms-0.7.2" sources."clone-1.0.2" sources."ansi-escapes-1.4.0" - sources."cli-cursor-1.0.2" + sources."cli-cursor-2.1.0" sources."cli-width-2.1.0" - sources."external-editor-1.1.1" - sources."figures-1.7.0" + sources."external-editor-2.0.1" + sources."figures-2.0.0" sources."lodash-4.17.4" - sources."mute-stream-0.0.6" - sources."pinkie-promise-2.0.1" + sources."mute-stream-0.0.7" sources."run-async-2.3.0" sources."rx-4.1.0" - sources."string-width-1.0.2" + sources."string-width-2.0.0" sources."through-2.3.8" - sources."restore-cursor-1.0.1" - sources."exit-hook-1.1.1" - sources."onetime-1.1.0" - sources."extend-3.0.0" - sources."spawn-sync-1.0.15" - sources."tmp-0.0.29" - sources."concat-stream-1.6.0" - sources."os-shim-0.1.3" - sources."inherits-2.0.3" - sources."typedarray-0.0.6" - sources."readable-stream-2.2.2" - sources."buffer-shims-1.0.0" - sources."core-util-is-1.0.2" - sources."isarray-1.0.0" - sources."process-nextick-args-1.0.7" - sources."string_decoder-0.10.31" - sources."util-deprecate-1.0.2" + sources."restore-cursor-2.0.0" + sources."onetime-2.0.0" + sources."signal-exit-3.0.2" + sources."mimic-fn-1.1.0" + sources."tmp-0.0.31" sources."os-tmpdir-1.0.2" - sources."object-assign-4.1.1" - sources."pinkie-2.0.4" sources."is-promise-2.1.0" - sources."code-point-at-1.1.0" - sources."is-fullwidth-code-point-1.0.0" - sources."number-is-nan-1.0.1" + sources."is-fullwidth-code-point-2.0.0" sources."loose-envify-1.3.1" sources."js-tokens-3.0.1" sources."builtin-modules-1.1.1" sources."ci-info-1.0.0" sources."currently-unhandled-0.4.1" - sources."signal-exit-3.0.2" sources."array-find-index-1.0.2" sources."brace-expansion-1.1.6" sources."balanced-match-0.4.2" @@ -28476,28 +29128,49 @@ in sources."npmlog-4.0.2" sources."osenv-0.1.4" sources."which-1.2.12" + sources."inherits-2.0.3" sources."fs.realpath-1.0.0" sources."inflight-1.0.6" sources."once-1.4.0" sources."path-is-absolute-1.0.1" sources."wrappy-1.0.2" - sources."abbrev-1.0.9" + sources."abbrev-1.1.0" sources."are-we-there-yet-1.1.2" sources."console-control-strings-1.1.0" - sources."gauge-2.7.3" + (sources."gauge-2.7.3" // { + dependencies = [ + sources."string-width-1.0.2" + sources."is-fullwidth-code-point-1.0.0" + ]; + }) sources."set-blocking-2.0.0" sources."delegates-1.0.0" + sources."readable-stream-2.2.3" + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" sources."aproba-1.1.1" sources."has-unicode-2.0.1" - sources."wide-align-1.1.0" + sources."object-assign-4.1.1" + (sources."wide-align-1.1.0" // { + dependencies = [ + sources."string-width-1.0.2" + sources."is-fullwidth-code-point-1.0.0" + ]; + }) + sources."code-point-at-1.1.0" + sources."number-is-nan-1.0.1" sources."os-homedir-1.0.2" sources."isexe-1.1.2" sources."retry-0.10.1" - sources."is-finite-1.0.2" sources."aws-sign2-0.6.0" sources."aws4-1.6.0" sources."caseless-0.11.0" sources."combined-stream-1.0.5" + sources."extend-3.0.0" sources."forever-agent-0.6.1" sources."form-data-2.1.2" sources."har-validator-2.0.6" @@ -28508,14 +29181,271 @@ in sources."json-stringify-safe-5.0.1" sources."mime-types-2.1.14" sources."oauth-sign-0.8.2" - sources."qs-6.3.0" + sources."qs-6.3.1" sources."stringstream-0.0.5" sources."tough-cookie-2.3.2" sources."tunnel-agent-0.4.3" sources."uuid-3.0.1" sources."delayed-stream-1.0.0" sources."asynckit-0.4.0" - sources."is-my-json-valid-2.15.0" + sources."is-my-json-valid-2.16.0" + sources."pinkie-promise-2.0.1" + sources."generate-function-2.0.0" + sources."generate-object-property-1.2.0" + sources."jsonpointer-4.0.1" + sources."xtend-4.0.1" + sources."is-property-1.0.2" + sources."pinkie-2.0.4" + sources."hoek-2.16.3" + sources."boom-2.10.1" + sources."cryptiles-2.0.5" + sources."sntp-1.0.9" + sources."assert-plus-0.2.0" + sources."jsprim-1.3.1" + (sources."sshpk-1.10.2" // { + dependencies = [ + sources."assert-plus-1.0.0" + ]; + }) + sources."extsprintf-1.0.2" + sources."json-schema-0.2.3" + sources."verror-1.3.6" + sources."asn1-0.2.3" + (sources."dashdash-1.14.1" // { + dependencies = [ + sources."assert-plus-1.0.0" + ]; + }) + (sources."getpass-0.1.6" // { + dependencies = [ + sources."assert-plus-1.0.0" + ]; + }) + sources."jsbn-0.1.1" + sources."tweetnacl-0.14.5" + sources."jodid25519-1.0.2" + sources."ecc-jsbn-0.1.1" + sources."bcrypt-pbkdf-1.0.1" + sources."mime-db-1.26.0" + sources."punycode-1.4.1" + sources."block-stream-0.0.9" + sources."bl-1.2.0" + (sources."end-of-stream-1.1.0" // { + dependencies = [ + sources."once-1.3.3" + ]; + }) + sources."spdx-correct-1.0.2" + sources."spdx-expression-parse-1.0.4" + sources."spdx-license-ids-1.2.2" + ]; + buildInputs = globalBuildInputs; + meta = { + description = "

\"Yarn\"

"; + homepage = "https://github.com/yarnpkg/yarn#readme"; + license = "BSD-2-Clause"; + }; + production = true; + }; + yo = nodeEnv.buildNodePackage { + name = "yo"; + packageName = "yo"; + version = "1.8.5"; + src = fetchurl { + url = "https://registry.npmjs.org/yo/-/yo-1.8.5.tgz"; + sha1 = "776ab9ec79a7882f8d4f7a9e10214fdab050d928"; + }; + dependencies = [ + sources."async-1.5.2" + sources."chalk-1.1.3" + sources."cli-list-0.1.8" + sources."configstore-1.4.0" + sources."cross-spawn-3.0.1" + sources."figures-1.7.0" + sources."fullname-2.1.0" + sources."got-5.7.1" + sources."humanize-string-1.0.1" + sources."inquirer-0.11.4" + (sources."insight-0.7.0" // { + dependencies = [ + sources."inquirer-0.10.1" + ]; + }) + sources."lodash-3.10.1" + (sources."meow-3.7.0" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + sources."npm-keyword-4.2.0" + sources."opn-3.0.3" + (sources."package-json-2.4.0" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + sources."parse-help-0.1.1" + sources."read-pkg-up-1.0.1" + sources."repeating-2.0.1" + sources."root-check-1.0.0" + sources."sort-on-1.3.0" + sources."string-length-1.0.1" + (sources."tabtab-1.3.2" // { + dependencies = [ + sources."inquirer-1.2.3" + sources."minimist-1.2.0" + sources."cli-width-2.1.0" + sources."lodash-4.17.4" + sources."mute-stream-0.0.6" + sources."run-async-2.3.0" + ]; + }) + sources."titleize-1.0.0" + (sources."update-notifier-0.6.3" // { + dependencies = [ + sources."configstore-2.1.0" + sources."dot-prop-3.0.0" + ]; + }) + sources."user-home-2.0.0" + (sources."yeoman-character-1.1.0" // { + dependencies = [ + sources."supports-color-3.2.3" + ]; + }) + (sources."yeoman-doctor-2.1.0" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + (sources."yeoman-environment-1.6.6" // { + dependencies = [ + sources."inquirer-1.2.3" + sources."lodash-4.17.4" + sources."cli-width-2.1.0" + sources."mute-stream-0.0.6" + sources."run-async-2.3.0" + ]; + }) + sources."yosay-1.2.1" + sources."ansi-styles-2.2.1" + sources."escape-string-regexp-1.0.5" + sources."has-ansi-2.0.0" + sources."strip-ansi-3.0.1" + sources."supports-color-2.0.0" + sources."ansi-regex-2.1.1" + sources."graceful-fs-4.1.11" + sources."mkdirp-0.5.1" + sources."object-assign-4.1.1" + sources."os-tmpdir-1.0.2" + sources."osenv-0.1.4" + sources."uuid-2.0.3" + sources."write-file-atomic-1.3.1" + sources."xdg-basedir-2.0.0" + sources."minimist-0.0.8" + sources."os-homedir-1.0.2" + sources."imurmurhash-0.1.4" + sources."slide-1.1.6" + sources."lru-cache-4.0.2" + sources."which-1.2.12" + sources."pseudomap-1.0.2" + sources."yallist-2.0.0" + sources."isexe-1.1.2" + sources."npmconf-2.1.2" + sources."pify-2.3.0" + sources."pinkie-promise-2.0.1" + sources."config-chain-1.1.11" + sources."inherits-2.0.3" + sources."ini-1.3.4" + sources."nopt-3.0.6" + sources."once-1.3.3" + sources."semver-4.3.6" + sources."uid-number-0.0.5" + sources."proto-list-1.2.4" + sources."abbrev-1.1.0" + sources."wrappy-1.0.2" + sources."pinkie-2.0.4" + sources."create-error-class-3.0.2" + sources."duplexer2-0.1.4" + sources."is-redirect-1.0.0" + sources."is-retry-allowed-1.1.0" + sources."is-stream-1.1.0" + sources."lowercase-keys-1.0.0" + sources."node-status-codes-1.0.0" + sources."parse-json-2.2.0" + sources."read-all-stream-3.1.0" + sources."readable-stream-2.2.3" + sources."timed-out-3.1.3" + sources."unzip-response-1.0.2" + sources."url-parse-lax-1.0.0" + sources."capture-stack-trace-1.0.0" + sources."error-ex-1.3.0" + sources."is-arrayish-0.2.1" + sources."buffer-shims-1.0.0" + sources."core-util-is-1.0.2" + sources."isarray-1.0.0" + sources."process-nextick-args-1.0.7" + sources."string_decoder-0.10.31" + sources."util-deprecate-1.0.2" + sources."prepend-http-1.0.4" + sources."decamelize-1.2.0" + sources."ansi-escapes-1.4.0" + sources."cli-cursor-1.0.2" + sources."cli-width-1.1.1" + sources."readline2-1.0.1" + sources."run-async-0.1.0" + sources."rx-lite-3.1.2" + sources."string-width-1.0.2" + sources."through-2.3.8" + sources."restore-cursor-1.0.1" + sources."exit-hook-1.1.1" + sources."onetime-1.1.0" + sources."code-point-at-1.1.0" + sources."is-fullwidth-code-point-1.0.0" + sources."mute-stream-0.0.5" + sources."number-is-nan-1.0.1" + sources."lodash.debounce-3.1.1" + sources."os-name-1.0.3" + (sources."request-2.79.0" // { + dependencies = [ + sources."uuid-3.0.1" + ]; + }) + sources."tough-cookie-2.3.2" + sources."lodash._getnative-3.9.1" + (sources."osx-release-1.1.0" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + (sources."win-release-1.1.1" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + sources."aws-sign2-0.6.0" + sources."aws4-1.6.0" + sources."caseless-0.11.0" + sources."combined-stream-1.0.5" + sources."extend-3.0.0" + sources."forever-agent-0.6.1" + sources."form-data-2.1.2" + sources."har-validator-2.0.6" + sources."hawk-3.1.3" + sources."http-signature-1.1.1" + sources."is-typedarray-1.0.0" + sources."isstream-0.1.2" + sources."json-stringify-safe-5.0.1" + sources."mime-types-2.1.14" + sources."oauth-sign-0.8.2" + sources."qs-6.3.1" + sources."stringstream-0.0.5" + sources."tunnel-agent-0.4.3" + sources."delayed-stream-1.0.0" + sources."asynckit-0.4.0" + sources."commander-2.9.0" + sources."is-my-json-valid-2.16.0" + sources."graceful-readlink-1.0.1" sources."generate-function-2.0.0" sources."generate-object-property-1.2.0" sources."jsonpointer-4.0.1" @@ -28553,22 +29483,145 @@ in sources."bcrypt-pbkdf-1.0.1" sources."mime-db-1.26.0" sources."punycode-1.4.1" - sources."is-utf8-0.2.1" - sources."block-stream-0.0.9" - sources."bl-1.2.0" - (sources."end-of-stream-1.1.0" // { - dependencies = [ - sources."once-1.3.3" - ]; - }) + sources."camelcase-keys-2.1.0" + sources."loud-rejection-1.6.0" + sources."map-obj-1.0.1" + sources."normalize-package-data-2.3.5" + sources."redent-1.0.0" + sources."trim-newlines-1.0.0" + sources."camelcase-2.1.1" + sources."currently-unhandled-0.4.1" + sources."signal-exit-3.0.2" + sources."array-find-index-1.0.2" + sources."hosted-git-info-2.2.0" + sources."is-builtin-module-1.0.0" + sources."validate-npm-package-license-3.0.1" + sources."builtin-modules-1.1.1" sources."spdx-correct-1.0.2" sources."spdx-expression-parse-1.0.4" sources."spdx-license-ids-1.2.2" + sources."indent-string-2.1.0" + sources."strip-indent-1.0.1" + sources."get-stdin-4.0.1" + sources."registry-url-3.1.0" + (sources."rc-1.1.7" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + sources."deep-extend-0.4.1" + sources."strip-json-comments-2.0.1" + sources."registry-auth-token-3.1.0" + sources."execall-1.0.0" + sources."clone-regexp-1.0.0" + sources."is-regexp-1.0.0" + sources."is-supported-regexp-flag-1.0.0" + sources."find-up-1.1.2" + sources."read-pkg-1.1.0" + sources."path-exists-2.1.0" + sources."load-json-file-1.1.0" + sources."path-type-1.1.0" + sources."strip-bom-2.0.0" + sources."is-utf8-0.2.1" + sources."is-finite-1.0.2" + sources."downgrade-root-1.2.2" + sources."sudo-block-1.2.0" + sources."default-uid-1.0.0" + sources."is-root-1.0.0" + sources."is-docker-1.1.0" + sources."arrify-1.0.1" + sources."dot-prop-2.4.0" + sources."is-obj-1.0.1" + sources."debug-2.6.1" + sources."npmlog-2.0.4" + sources."ms-0.7.2" + sources."external-editor-1.1.1" + sources."rx-4.1.0" + sources."spawn-sync-1.0.15" + sources."tmp-0.0.29" + sources."concat-stream-1.6.0" + sources."os-shim-0.1.3" + sources."typedarray-0.0.6" + sources."is-promise-2.1.0" + sources."ansi-0.3.1" + sources."are-we-there-yet-1.1.2" + sources."gauge-1.2.7" + sources."delegates-1.0.0" + sources."has-unicode-2.0.1" + sources."lodash.pad-4.5.1" + sources."lodash.padend-4.6.1" + sources."lodash.padstart-4.6.1" + sources."boxen-0.3.1" + sources."is-npm-1.0.0" + sources."latest-version-2.0.0" + (sources."semver-diff-2.1.0" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + sources."filled-array-1.1.0" + sources."widest-line-1.0.0" + sources."has-flag-1.0.0" + (sources."bin-version-check-2.1.0" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + sources."each-async-1.1.1" + sources."log-symbols-1.0.2" + sources."object-values-1.0.0" + sources."twig-0.8.9" + sources."bin-version-1.0.4" + (sources."semver-truncate-1.1.2" // { + dependencies = [ + sources."semver-5.3.0" + ]; + }) + sources."find-versions-1.2.1" + sources."array-uniq-1.0.3" + sources."semver-regex-1.0.0" + sources."set-immediate-shim-1.0.1" + sources."walk-2.3.9" + sources."minimatch-3.0.3" + sources."foreachasync-3.0.0" + sources."brace-expansion-1.1.6" + sources."balanced-match-0.4.2" + sources."concat-map-0.0.1" + sources."diff-2.2.3" + sources."globby-4.1.0" + (sources."grouped-queue-0.3.3" // { + dependencies = [ + sources."lodash-4.17.4" + ]; + }) + sources."mem-fs-1.1.3" + sources."text-table-0.2.0" + sources."untildify-2.1.0" + sources."array-union-1.0.2" + sources."glob-6.0.4" + sources."inflight-1.0.6" + sources."path-is-absolute-1.0.1" + sources."through2-2.0.3" + sources."vinyl-1.2.0" + sources."vinyl-file-2.0.0" + sources."clone-1.0.2" + sources."clone-stats-0.0.1" + sources."replace-ext-0.0.1" + sources."strip-bom-stream-2.0.0" + sources."first-chunk-stream-2.0.0" + sources."cli-boxes-1.0.0" + sources."pad-component-0.0.1" + (sources."taketalk-1.0.0" // { + dependencies = [ + sources."minimist-1.2.0" + ]; + }) + sources."wrap-ansi-2.1.0" ]; buildInputs = globalBuildInputs; meta = { - description = "

\"Yarn\"

"; - homepage = "https://github.com/yarnpkg/yarn#readme"; + description = "CLI tool for running Yeoman generators"; + homepage = http://yeoman.io/; license = "BSD-2-Clause"; }; production = true; diff --git a/pkgs/development/node-packages/node-packages.json b/pkgs/development/node-packages/node-packages.json index 5f48cb9b02e..80e6383a6f4 100644 --- a/pkgs/development/node-packages/node-packages.json +++ b/pkgs/development/node-packages/node-packages.json @@ -66,4 +66,5 @@ , "webpack" , "wring" , "yarn" +, "yo" ] From b7d15edd9e9766612087a112e762b6abb0387b63 Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 20:21:13 +0100 Subject: [PATCH 196/216] bump version to 17.10 This will be the Hummingbird release --- .version | 2 +- nixos/modules/misc/version.nix | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.version b/.version index 6879fa566dd..6daccccf784 100644 --- a/.version +++ b/.version @@ -1 +1 @@ -17.03 \ No newline at end of file +17.10 diff --git a/nixos/modules/misc/version.nix b/nixos/modules/misc/version.nix index bf20e801f61..315c33a462c 100644 --- a/nixos/modules/misc/version.nix +++ b/nixos/modules/misc/version.nix @@ -95,7 +95,7 @@ in nixosVersionSuffix = mkIf (pathIsDirectory gitRepo) (mkDefault (".git." + gitCommitId)); # Note: code names must only increase in alphabetical order. - nixosCodeName = "Gorilla"; + nixosCodeName = "Hummingbird"; }; # Generate /etc/os-release. See From 81de55118d2994a0097c8a93a965c11b6d339cc4 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B8rn=20Forsman?= Date: Mon, 27 Feb 2017 20:09:18 +0100 Subject: [PATCH 197/216] eclipse: add aliases for "latest" versions Add aliases like "eclipse-cpp = eclipse-cpp-46" so that user configurations can point to "eclipse-cpp" and have it not regularly break as nixpkgs is updated. --- pkgs/applications/editors/eclipse/default.nix | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/pkgs/applications/editors/eclipse/default.nix b/pkgs/applications/editors/eclipse/default.nix index cde3475196f..d9d731f3835 100644 --- a/pkgs/applications/editors/eclipse/default.nix +++ b/pkgs/applications/editors/eclipse/default.nix @@ -14,6 +14,8 @@ rec { ### Eclipse CPP + eclipse-cpp = eclipse-cpp-46; # always point to latest + eclipse-cpp-46 = buildEclipse { name = "eclipse-cpp-4.6.0"; description = "Eclipse IDE for C/C++ Developers, Neon release"; @@ -50,6 +52,8 @@ rec { ### Eclipse Modeling + eclipse-modeling = eclipse-modeling-46; # always point to latest + eclipse-modeling-46 = buildEclipse { name = "eclipse-modeling-4.6"; description = "Eclipse Modeling Tools"; @@ -85,7 +89,7 @@ rec { ### Eclipse Platform - eclipse-platform = eclipse-platform-46; + eclipse-platform = eclipse-platform-46; # always point to latest eclipse-platform-46 = buildEclipse { name = "eclipse-platform-4.6.2"; @@ -104,6 +108,8 @@ rec { ### Eclipse Scala SDK + eclipse-scala-sdk = eclipse-scala-sdk-441; # always point to latest + eclipse-scala-sdk-441 = buildEclipse { name = "eclipse-scala-sdk-4.4.1"; description = "Eclipse IDE for Scala Developers"; @@ -122,6 +128,8 @@ rec { ### Eclipse SDK + eclipse-sdk = eclipse-sdk-46; # always point to latest + eclipse-sdk-46 = buildEclipse { name = "eclipse-sdk-4.6.2"; description = "Eclipse Neon 2 Classic"; From 172a2bbeaf7b0c6a905bdfbb24b5fd67a1e8cbad Mon Sep 17 00:00:00 2001 From: Leon Isenberg Date: Mon, 27 Feb 2017 20:21:33 +0100 Subject: [PATCH 198/216] haskell: ghc710x packages: remove obsolete configurations --- pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix | 4 ---- 1 file changed, 4 deletions(-) diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix index 6263d38a2bb..45199ab9420 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix @@ -187,9 +187,7 @@ self: super: { mono-traversable = addBuildDepend super.mono-traversable self.semigroups; attoparsec = addBuildDepends super.attoparsec (with self; [semigroups fail]); Glob = addBuildDepends super.Glob (with self; [semigroups]); - Glob_0_7_10 = addBuildDepends super.Glob_0_7_10 (with self; [semigroups]); aeson = disableCabalFlag (addBuildDepend super.aeson self.semigroups) "old-locale"; - aeson_0_11_2_0 = disableCabalFlag (addBuildDepend super.aeson_0_11_2_0 self.semigroups) "old-locale"; bytes = addBuildDepend super.bytes self.doctest; case-insensitive = addBuildDepend super.case-insensitive self.semigroups; hoauth2 = overrideCabal super.hoauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.wai self.warp ]; }); @@ -197,13 +195,11 @@ self: super: { intervals = addBuildDepends super.intervals (with self; [doctest QuickCheck]); lens = addBuildDepends super.lens (with self; [doctest generic-deriving nats simple-reflect]); semigroups = addBuildDepends super.semigroups (with self; [hashable tagged text unordered-containers]); - semigroups_0_18_1 = addBuildDepends super.semigroups (with self; [hashable tagged text unordered-containers]); texmath = addBuildDepend super.texmath self.network-uri; yesod-auth-oauth2 = overrideCabal super.yesod-auth-oauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.load-env self.yesod ]; }); # cereal must have `fail` in pre-ghc-8.0.x versions # also tests require bytestring>=0.10.8.1 cereal = dontCheck (addBuildDepend super.cereal self.fail); - cereal_0_5_2_0 = dontCheck (addBuildDepend super.cereal_0_5_2_0 self.fail); # Moved out from common as no longer the case for GHC8 ghc-mod = super.ghc-mod.override { cabal-helper = self.cabal-helper_0_6_3_1; }; From 1aa6d77af4a10cf9f66f2bef0b1ad81a2a9c18b6 Mon Sep 17 00:00:00 2001 From: Leon Isenberg Date: Mon, 27 Feb 2017 20:25:19 +0100 Subject: [PATCH 199/216] haskell: add semigroups dependency to Quickcheck for GHC < 8 --- pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix index 45199ab9420..c07ce1e6fe8 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix @@ -194,6 +194,7 @@ self: super: { hslogger = addBuildDepend super.hslogger self.HUnit; intervals = addBuildDepends super.intervals (with self; [doctest QuickCheck]); lens = addBuildDepends super.lens (with self; [doctest generic-deriving nats simple-reflect]); + QuickCheck = addBuildDepend super.QuickCheck self.semigroups; semigroups = addBuildDepends super.semigroups (with self; [hashable tagged text unordered-containers]); texmath = addBuildDepend super.texmath self.network-uri; yesod-auth-oauth2 = overrideCabal super.yesod-auth-oauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.load-env self.yesod ]; }); From 24c93619e96a24a26d6eefff5595e240a81cb2f1 Mon Sep 17 00:00:00 2001 From: Leon Isenberg Date: Mon, 27 Feb 2017 20:26:27 +0100 Subject: [PATCH 200/216] haskell: break dependency cycle between QuickCheck and semigroups for GHC < 8 The cycle: QuickCheck -> semigroups semigroups -> hashable semigroups -> unordered-containers unordered-containers -> hashable unordered-containers -> QuickCheck # test suite only hashable -> QuickCheck # test suite only --- pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix index c07ce1e6fe8..26b3daa25bf 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix @@ -182,6 +182,10 @@ self: super: { # https://github.com/well-typed/hackage-security/issues/158 hackage-security = dontHaddock (dontCheck super.hackage-security); + # Breaks a dependency cycle between QuickCheck and semigroups + hashable = dontCheck super.hashable; + unordered-containers = dontCheck super.unordered-containers; + # GHC versions prior to 8.x require additional build inputs. distributive = addBuildDepend super.distributive self.semigroups; mono-traversable = addBuildDepend super.mono-traversable self.semigroups; From 386ddc739cd48dbaf57e806096de0ade1f24469f Mon Sep 17 00:00:00 2001 From: Leon Isenberg Date: Mon, 27 Feb 2017 20:30:57 +0100 Subject: [PATCH 201/216] haskell: add semigroups dependency to optparse-applicative for GHC < 8 --- pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix index 26b3daa25bf..2c1888b5eef 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix @@ -198,6 +198,7 @@ self: super: { hslogger = addBuildDepend super.hslogger self.HUnit; intervals = addBuildDepends super.intervals (with self; [doctest QuickCheck]); lens = addBuildDepends super.lens (with self; [doctest generic-deriving nats simple-reflect]); + optparse-applicative = addBuildDepend super.optparse-applicative self.semigroups; QuickCheck = addBuildDepend super.QuickCheck self.semigroups; semigroups = addBuildDepends super.semigroups (with self; [hashable tagged text unordered-containers]); texmath = addBuildDepend super.texmath self.network-uri; From 755902b54318b2768971c6ae708c471a176a6b3a Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 20:36:13 +0100 Subject: [PATCH 202/216] release-notes: add 17.09 --- .../manual/release-notes/release-notes.xml | 1 + nixos/doc/manual/release-notes/rl-1709.xml | 48 +++++++++++++++++++ 2 files changed, 49 insertions(+) create mode 100644 nixos/doc/manual/release-notes/rl-1709.xml diff --git a/nixos/doc/manual/release-notes/release-notes.xml b/nixos/doc/manual/release-notes/release-notes.xml index 20d3f74f94b..6065a86f60d 100644 --- a/nixos/doc/manual/release-notes/release-notes.xml +++ b/nixos/doc/manual/release-notes/release-notes.xml @@ -9,6 +9,7 @@ This section lists the release notes for each stable version of NixOS and current unstable revision. + diff --git a/nixos/doc/manual/release-notes/rl-1709.xml b/nixos/doc/manual/release-notes/rl-1709.xml new file mode 100644 index 00000000000..11723f2c145 --- /dev/null +++ b/nixos/doc/manual/release-notes/rl-1709.xml @@ -0,0 +1,48 @@ +
+ +Release 17.09 (“Hummingbird”, 2017/03/??) + +In addition to numerous new and upgraded packages, this release +has the following highlights: + + + + + + + + +The following new services were added since the last release: + + + + + + + + +When upgrading from a previous release, please be aware of the +following incompatible changes: + + + + + + + + + +Other notable improvements: + + + + + + + + +
From c710a2d477e8d1bb0f6431c275a3c7af65ace7de Mon Sep 17 00:00:00 2001 From: Robin Gloster Date: Mon, 27 Feb 2017 20:42:36 +0100 Subject: [PATCH 203/216] version: it's 17.09 not 17.10 --- .version | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.version b/.version index 6daccccf784..2fdad9f4058 100644 --- a/.version +++ b/.version @@ -1 +1 @@ -17.10 +17.09 From e292d166e8e892dd6ca200245ef114e1db1c9807 Mon Sep 17 00:00:00 2001 From: Shea Levy Date: Mon, 27 Feb 2017 15:28:43 -0500 Subject: [PATCH 204/216] fwupd: Fix localstatedir --- pkgs/os-specific/linux/firmware/fwupd/default.nix | 4 +++- .../firmware/fwupd/localstatedir-check-perms.patch | 12 ++++++++++++ 2 files changed, 15 insertions(+), 1 deletion(-) create mode 100644 pkgs/os-specific/linux/firmware/fwupd/localstatedir-check-perms.patch diff --git a/pkgs/os-specific/linux/firmware/fwupd/default.nix b/pkgs/os-specific/linux/firmware/fwupd/default.nix index 4c88e9c6807..5e109f9f46e 100644 --- a/pkgs/os-specific/linux/firmware/fwupd/default.nix +++ b/pkgs/os-specific/linux/firmware/fwupd/default.nix @@ -15,7 +15,8 @@ let version = "0.8.1"; in polkit gcab appstream-glib gusb sqlite libarchive libsoup docbook2x libxslt libelf libsmbios fwupdate libyaml valgrind ]; - patchPhase = '' + patches = [ ./localstatedir-check-perms.patch ]; + postPatch = '' sed -i -e \ 's|/usr/bin/gpgme-config|${gpgme.dev}/bin/gpgme-config|' -e \ 's|/usr/bin/gpg-error-config|${libgpgerror.dev}/bin/gpg-error-config|' \ @@ -27,6 +28,7 @@ let version = "0.8.1"; in configureFlags = [ "--with-systemdunitdir=$(out)/lib/systemd/system" "--with-udevrulesdir=$(out)/lib/udev/rules.d" + "--localstatedir=/var" ]; enableParallelBuilding = true; meta = diff --git a/pkgs/os-specific/linux/firmware/fwupd/localstatedir-check-perms.patch b/pkgs/os-specific/linux/firmware/fwupd/localstatedir-check-perms.patch new file mode 100644 index 00000000000..0c1429d4f2e --- /dev/null +++ b/pkgs/os-specific/linux/firmware/fwupd/localstatedir-check-perms.patch @@ -0,0 +1,12 @@ +diff -Naur fwupd-0.8.1-orig/src/Makefile.in fwupd-0.8.1/src/Makefile.in +--- fwupd-0.8.1-orig/src/Makefile.in 2017-02-24 02:59:23.000000000 -0500 ++++ fwupd-0.8.1/src/Makefile.in 2017-02-27 15:06:56.218901891 -0500 +@@ -1639,7 +1639,7 @@ + $(srcdir)/fwupd.gresource.xml + + install-data-hook: +- if test -w $(DESTDIR)$(prefix)/; then \ ++ if test -w $$(dirname $(DESTDIR)$(localstatedir)/); then \ + mkdir -p $(DESTDIR)$(localstatedir)/lib/fwupd; \ + chmod 0755 $(DESTDIR)$(localstatedir)/lib/fwupd; \ + mkdir -p $(DESTDIR)$(localstatedir)/cache/app-info/xmls; \ From 7992ce65fc46e7153480ac4211c7f65ae3ba6b37 Mon Sep 17 00:00:00 2001 From: Pascal Bach Date: Mon, 27 Feb 2017 19:08:34 +0100 Subject: [PATCH 205/216] gitlab-runner: 1.10.4 -> 1.11.0 --- .../continuous-integration/gitlab-runner/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix b/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix index 7c8c71b2969..5e46b079aaa 100644 --- a/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix +++ b/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix @@ -1,16 +1,16 @@ { lib, buildGoPackage, fetchFromGitLab, fetchurl, go-bindata }: let - version = "1.10.4"; + version = "1.11.0"; # Gitlab runner embeds some docker images these are prebuilt for arm and x86_64 docker_x86_64 = fetchurl { url = "https://gitlab-ci-multi-runner-downloads.s3.amazonaws.com/v${version}/docker/prebuilt-x86_64.tar.xz"; - sha256 = "0csaacghcdnkrpxiwsg8166nmdpnddf77c619i558vj0wdglq45k"; + sha256 = "082slksd0fs0gpwi7kzmk2i71y52xccsn2r2j6qxmbzxwhpwli83"; }; docker_arm = fetchurl { url = "https://gitlab-ci-multi-runner-downloads.s3.amazonaws.com/v${version}/docker/prebuilt-arm.tar.xz"; - sha256 = "1lsdp4v92v406qiwr435ym4f3zbc1vq6ipwrp7li640frhr2jqpk"; + sha256 = "1c0awx4q27bckk4xpnw7357d5422iz971jkrfin17wrya4dshg64"; }; in buildGoPackage rec { @@ -29,7 +29,7 @@ buildGoPackage rec { owner = "gitlab-org"; repo = "gitlab-ci-multi-runner"; rev = "v${version}"; - sha256 = "0r8f1m9f544ikcknvq1500kfjxbikgqlv7wdayfpazvj6s1zlswg"; + sha256 = "0fvkdiyfp1bf68j3kq721msfhmv8snf968yxgm7d1y6shidghrqb"; }; buildInputs = [ go-bindata ]; From 9e7ce9010c572fcaa41daf2ed821a01cf4f7335a Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Llu=C3=ADs=20Batlle=20i=20Rossell?= Date: Mon, 27 Feb 2017 22:36:27 +0100 Subject: [PATCH 206/216] lzbench: init at 20170208 MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit In-memory benchmark of several up-to-date compressors. Signed-off-by: Lluís Batlle i Rossell --- pkgs/tools/compression/lzbench/default.nix | 28 ++++++++++++++++++++++ pkgs/top-level/all-packages.nix | 2 ++ 2 files changed, 30 insertions(+) create mode 100644 pkgs/tools/compression/lzbench/default.nix diff --git a/pkgs/tools/compression/lzbench/default.nix b/pkgs/tools/compression/lzbench/default.nix new file mode 100644 index 00000000000..a38e0a67b28 --- /dev/null +++ b/pkgs/tools/compression/lzbench/default.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchFromGitHub, glibc }: + +stdenv.mkDerivation rec { + name = "lzbench-20170208"; + + src = fetchFromGitHub { + owner = "inikep"; + repo = "lzbench"; + rev = "d5e9b58"; + sha256 = "16xj5fldwl639f0ys5rx54csbfvf35ja34bdl5m068hdn6dr47r5"; + }; + + enableParallelBuilding = true; + + buildInputs = stdenv.lib.optionals stdenv.isLinux [ stdenv.glibc.static ]; + + installPhase = '' + mkdir -p $out/bin + cp lzbench $out/bin + ''; + + meta = with stdenv.lib; { + inherit (src.meta) homepage; + description = "In-memory benchmark of open-source LZ77/LZSS/LZMA compressors"; + license = licenses.free; + platforms = platforms.all; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index b477a9df832..caf54ebf9e2 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -2769,6 +2769,8 @@ with pkgs; lz4 = callPackage ../tools/compression/lz4 { }; + lzbench = callPackage ../tools/compression/lzbench { }; + lzop = callPackage ../tools/compression/lzop { }; macchanger = callPackage ../os-specific/linux/macchanger { }; From 40b9506139d00ed0d3536518daeec6bf45084b10 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Llu=C3=ADs=20Batlle=20i=20Rossell?= Date: Mon, 27 Feb 2017 22:37:39 +0100 Subject: [PATCH 207/216] megatools: 1.9.97 -> 1.9.98 MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Signed-off-by: Lluís Batlle i Rossell --- pkgs/tools/networking/megatools/default.nix | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/pkgs/tools/networking/megatools/default.nix b/pkgs/tools/networking/megatools/default.nix index b06308acfc4..f948ab8eb61 100644 --- a/pkgs/tools/networking/megatools/default.nix +++ b/pkgs/tools/networking/megatools/default.nix @@ -1,17 +1,17 @@ { stdenv, fetchurl, pkgconfig, glib, fuse, curl, glib_networking, gsettings_desktop_schemas -, makeWrapper }: +, asciidoc, makeWrapper }: stdenv.mkDerivation rec { name = "megatools-${version}"; - version = "1.9.97"; + version = "1.9.98"; src = fetchurl { url = "http://megatools.megous.com/builds/${name}.tar.gz"; - sha256 = "1wssf8f2ndh43sdzcfc644azqa7bjppl3b9s26mz1pjswmpca5ik"; + sha256 = "0vx1farp0dpg4zwvxdbfdnzjk9qx3sn109p1r1zl3g3xsaj221cv"; }; buildInputs = [ pkgconfig glib fuse curl makeWrapper - gsettings_desktop_schemas ]; + gsettings_desktop_schemas asciidoc ]; postInstall = '' for i in $(find $out/bin/ -type f); do From 81b43ccd5773445a7e7e590b99b5b760a1401e3b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Vladim=C3=ADr=20=C4=8Cun=C3=A1t?= Date: Mon, 27 Feb 2017 23:03:16 +0100 Subject: [PATCH 208/216] 17.09 release notes: fix typos --- nixos/doc/manual/release-notes/rl-1709.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/nixos/doc/manual/release-notes/rl-1709.xml b/nixos/doc/manual/release-notes/rl-1709.xml index 11723f2c145..b99ce396461 100644 --- a/nixos/doc/manual/release-notes/rl-1709.xml +++ b/nixos/doc/manual/release-notes/rl-1709.xml @@ -2,9 +2,9 @@ xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xi="http://www.w3.org/2001/XInclude" version="5.0" - xml:id="sec-release-17.10"> + xml:id="sec-release-17.09"> -Release 17.09 (“Hummingbird”, 2017/03/??) +Release 17.09 (“Hummingbird”, 2017/09/??) In addition to numerous new and upgraded packages, this release has the following highlights: From e3d58dae7f83998395259824ef83dedc33e9ab62 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Wed, 25 Jan 2017 23:21:33 +0100 Subject: [PATCH 209/216] phpfpm service: one service per pool for isolation --- .../services/web-servers/phpfpm/default.nix | 47 ++++++++++++------- 1 file changed, 29 insertions(+), 18 deletions(-) diff --git a/nixos/modules/services/web-servers/phpfpm/default.nix b/nixos/modules/services/web-servers/phpfpm/default.nix index 2471a06a3b0..f1161c9e19f 100644 --- a/nixos/modules/services/web-servers/phpfpm/default.nix +++ b/nixos/modules/services/web-servers/phpfpm/default.nix @@ -7,21 +7,21 @@ let stateDir = "/run/phpfpm"; + poolConfigs = cfg.poolConfigs // mapAttrs mkPool cfg.pools; + mkPool = n: p: '' - [${n}] listen = ${p.listen} ${p.extraConfig} ''; - cfgFile = pkgs.writeText "phpfpm.conf" '' + fpmCfgFile = pool: poolConfig: pkgs.writeText "phpfpm-${pool}.conf" '' [global] error_log = syslog daemonize = no ${cfg.extraConfig} - ${concatStringsSep "\n" (mapAttrsToList mkPool cfg.pools)} - - ${concatStringsSep "\n" (mapAttrsToList (n: v: "[${n}]\n${v}") cfg.poolConfigs)} + [${pool}] + ${poolConfig} ''; phpIni = pkgs.runCommand "php.ini" { @@ -119,18 +119,29 @@ in { }; }; - config = mkIf (cfg.pools != {} || cfg.poolConfigs != {}) { - - systemd.services.phpfpm = { - wantedBy = [ "multi-user.target" ]; - preStart = '' - mkdir -p "${stateDir}" - ''; - serviceConfig = { - Type = "notify"; - ExecStart = "${cfg.phpPackage}/bin/php-fpm -y ${cfgFile} -c ${phpIni}"; - ExecReload = "${pkgs.coreutils}/bin/kill -USR2 $MAINPID"; - }; - }; + config = { + systemd.services = flip mapAttrs' poolConfigs (pool: poolConfig: + nameValuePair "phpfpm-${pool}" { + description = "PHP FastCGI Process Manager for pool ${pool}"; + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + preStart = '' + mkdir -p ${stateDir} + ''; + serviceConfig = let + cfgFile = fpmCfgFile pool poolConfig; + in { + PrivateTmp = true; + PrivateDevices = true; + ProtectSystem = "full"; + ProtectHome = true; + NoNewPrivileges = true; + RestrictAddressFamilies = "AF_UNIX AF_INET AF_INET6"; + Type = "notify"; + ExecStart = "${cfg.phpPackage}/bin/php-fpm -y ${cfgFile} -c ${phpIni}"; + ExecReload = "${pkgs.coreutils}/bin/kill -USR2 $MAINPID"; + }; + } + ); }; } From ec4ead0bfee965be95e596d39d4b076e9fe01267 Mon Sep 17 00:00:00 2001 From: Franz Pletz Date: Tue, 28 Feb 2017 00:00:57 +0100 Subject: [PATCH 210/216] phpfpm service: add target and slice --- .../services/web-servers/phpfpm/default.nix | 19 ++++++++++++++++--- 1 file changed, 16 insertions(+), 3 deletions(-) diff --git a/nixos/modules/services/web-servers/phpfpm/default.nix b/nixos/modules/services/web-servers/phpfpm/default.nix index f1161c9e19f..488bd3fe0ef 100644 --- a/nixos/modules/services/web-servers/phpfpm/default.nix +++ b/nixos/modules/services/web-servers/phpfpm/default.nix @@ -4,6 +4,7 @@ with lib; let cfg = config.services.phpfpm; + enabled = cfg.poolConfigs != {} || cfg.pools != {}; stateDir = "/run/phpfpm"; @@ -119,18 +120,30 @@ in { }; }; - config = { + config = mkIf enabled { + + systemd.slices.phpfpm = { + description = "PHP FastCGI Process manager pools slice"; + }; + + systemd.targets.phpfpm = { + description = "PHP FastCGI Process manager pools target"; + wantedBy = [ "multi-user.target" ]; + }; + systemd.services = flip mapAttrs' poolConfigs (pool: poolConfig: nameValuePair "phpfpm-${pool}" { - description = "PHP FastCGI Process Manager for pool ${pool}"; + description = "PHP FastCGI Process Manager service for pool ${pool}"; after = [ "network.target" ]; - wantedBy = [ "multi-user.target" ]; + wantedBy = [ "phpfpm.target" ]; + partOf = [ "phpfpm.target" ]; preStart = '' mkdir -p ${stateDir} ''; serviceConfig = let cfgFile = fpmCfgFile pool poolConfig; in { + Slice = "phpfpm.slice"; PrivateTmp = true; PrivateDevices = true; ProtectSystem = "full"; From 3f2566689d14f1d7778d55ca807d1dad2f4695d1 Mon Sep 17 00:00:00 2001 From: Daiderd Jordan Date: Tue, 14 Feb 2017 23:18:44 +0100 Subject: [PATCH 211/216] modules: add support for module replacement with disabledModules This is based on a prototype Nicolas B. Pierron worked on during a discussion we had at FOSDEM. --- lib/modules.nix | 24 ++++-- lib/tests/modules.sh | 8 ++ lib/tests/modules/default.nix | 1 + lib/tests/modules/disable-declare-enable.nix | 5 ++ lib/tests/modules/disable-define-enable.nix | 5 ++ lib/tests/modules/disable-enable-modules.nix | 5 ++ .../manual/development/replace-modules.xml | 75 +++++++++++++++++++ .../manual/development/writing-modules.xml | 1 + nixos/doc/manual/release-notes/rl-1703.xml | 10 +++ 9 files changed, 127 insertions(+), 7 deletions(-) create mode 100644 lib/tests/modules/disable-declare-enable.nix create mode 100644 lib/tests/modules/disable-define-enable.nix create mode 100644 lib/tests/modules/disable-enable-modules.nix create mode 100644 nixos/doc/manual/development/replace-modules.xml diff --git a/lib/modules.nix b/lib/modules.nix index 4eee41306cd..de9cfc637ae 100644 --- a/lib/modules.nix +++ b/lib/modules.nix @@ -20,7 +20,8 @@ rec { , prefix ? [] , # This should only be used for special arguments that need to be evaluated # when resolving module structure (like in imports). For everything else, - # there's _module.args. + # there's _module.args. If specialArgs.modulesPath is defined it will be + # used as the base path for disabledModules. specialArgs ? {} , # This would be remove in the future, Prefer _module.args option instead. args ? {} @@ -58,10 +59,7 @@ rec { closed = closeModules (modules ++ [ internalModule ]) ({ inherit config options; lib = import ./.; } // specialArgs); - # Note: the list of modules is reversed to maintain backward - # compatibility with the old module system. Not sure if this is - # the most sensible policy. - options = mergeModules prefix (reverseList closed); + options = mergeModules prefix (filterModules (specialArgs.modulesPath or "") closed); # Traverse options and extract the option values into the final # config set. At the same time, check whether all option @@ -87,6 +85,16 @@ rec { result = { inherit options config; }; in result; + + # Filter disabled modules. Modules can be disabled allowing + # their implementation to be replaced. + filterModules = modulesPath: modules: + let + moduleKey = m: if isString m then toString modulesPath + "/" + m else toString m; + disabledKeys = map moduleKey (concatMap (m: m.disabledModules) modules); + in + filter (m: !(elem m.key disabledKeys)) modules; + /* Close a set of modules under the ‘imports’ relation. */ closeModules = modules: args: let @@ -111,12 +119,13 @@ rec { else {}; in if m ? config || m ? options then - let badAttrs = removeAttrs m ["imports" "options" "config" "key" "_file" "meta"]; in + let badAttrs = removeAttrs m ["_file" "key" "disabledModules" "imports" "options" "config" "meta"]; in if badAttrs != {} then throw "Module `${key}' has an unsupported attribute `${head (attrNames badAttrs)}'. This is caused by assignments to the top-level attributes `config' or `options'." else { file = m._file or file; key = toString m.key or key; + disabledModules = m.disabledModules or []; imports = m.imports or []; options = m.options or {}; config = mkMerge [ (m.config or {}) metaSet ]; @@ -124,9 +133,10 @@ rec { else { file = m._file or file; key = toString m.key or key; + disabledModules = m.disabledModules or []; imports = m.require or [] ++ m.imports or []; options = {}; - config = mkMerge [ (removeAttrs m ["key" "_file" "require" "imports"]) metaSet ]; + config = mkMerge [ (removeAttrs m ["_file" "key" "disabledModules" "require" "imports"]) metaSet ]; }; applyIfFunction = key: f: args@{ config, options, lib, ... }: if isFunction f then diff --git a/lib/tests/modules.sh b/lib/tests/modules.sh index 8b476a5d3dc..ba0c67fb7d4 100755 --- a/lib/tests/modules.sh +++ b/lib/tests/modules.sh @@ -99,6 +99,14 @@ checkConfigOutput 'true' "$@" ./define-enable.nix ./define-loaOfSub-if-foo-enabl checkConfigOutput 'true' "$@" ./define-enable.nix ./define-loaOfSub-foo-if-enable.nix checkConfigOutput 'true' "$@" ./define-enable.nix ./define-loaOfSub-foo-enable-if.nix +# Check disabledModules with config definitions and option declarations. +set -- config.enable ./define-enable.nix ./declare-enable.nix +checkConfigOutput "true" "$@" +checkConfigOutput "false" "$@" ./disable-define-enable.nix +checkConfigError "The option .*enable.* defined in .* does not exist" "$@" ./disable-declare-enable.nix +checkConfigError "attribute .*enable.* in selection path .*config.enable.* not found" "$@" ./disable-define-enable.nix ./disable-declare-enable.nix +checkConfigError "attribute .*enable.* in selection path .*config.enable.* not found" "$@" ./disable-enable-modules.nix + # Check _module.args. set -- config.enable ./declare-enable.nix ./define-enable-with-custom-arg.nix checkConfigError 'while evaluating the module argument .*custom.* in .*define-enable-with-custom-arg.nix.*:' "$@" diff --git a/lib/tests/modules/default.nix b/lib/tests/modules/default.nix index 5df7d9751ea..5be3af0ffe8 100644 --- a/lib/tests/modules/default.nix +++ b/lib/tests/modules/default.nix @@ -3,5 +3,6 @@ { inherit (lib.evalModules { inherit modules; + specialArgs.modulesPath = ./.; }) config options; } diff --git a/lib/tests/modules/disable-declare-enable.nix b/lib/tests/modules/disable-declare-enable.nix new file mode 100644 index 00000000000..a373ee7e550 --- /dev/null +++ b/lib/tests/modules/disable-declare-enable.nix @@ -0,0 +1,5 @@ +{ lib, ... }: + +{ + disabledModules = [ ./declare-enable.nix ]; +} diff --git a/lib/tests/modules/disable-define-enable.nix b/lib/tests/modules/disable-define-enable.nix new file mode 100644 index 00000000000..0d84a7c3cb6 --- /dev/null +++ b/lib/tests/modules/disable-define-enable.nix @@ -0,0 +1,5 @@ +{ lib, ... }: + +{ + disabledModules = [ ./define-enable.nix ]; +} diff --git a/lib/tests/modules/disable-enable-modules.nix b/lib/tests/modules/disable-enable-modules.nix new file mode 100644 index 00000000000..c325f4e0743 --- /dev/null +++ b/lib/tests/modules/disable-enable-modules.nix @@ -0,0 +1,5 @@ +{ lib, ... }: + +{ + disabledModules = [ "define-enable.nix" "declare-enable.nix" ]; +} diff --git a/nixos/doc/manual/development/replace-modules.xml b/nixos/doc/manual/development/replace-modules.xml new file mode 100644 index 00000000000..cc0539ec510 --- /dev/null +++ b/nixos/doc/manual/development/replace-modules.xml @@ -0,0 +1,75 @@ +
+ +Replace Modules + +Modules that are imported can also be disabled. The option + declarations and config implementation of a disabled module will be + ignored, allowing another to take it's place. This can be used to + import a set of modules from another channel while keeping the rest + of the system on a stable release. +disabledModules is a top level attribute like + imports, options and + config. It contains a list of modules that will + be disabled. This can either be the full path to the module or a + string with the filename relative to the modules path + (eg. <nixpkgs/nixos/modules> for nixos). + + +This example will replace the existing postgresql module with + the version defined in the nixos-unstable channel while keeping the + rest of the modules and packages from the original nixos channel. + This only overrides the module definition, this won't use postgresql + from nixos-unstable unless explicitly configured to do so. + + +{ config, lib, pkgs, ... }: + +{ + disabledModules = [ "services/databases/postgresql.nix" ]; + + imports = + [ # Use postgresql service from nixos-unstable channel. + # sudo nix-channel --add http://nixos.org/channels/nixos-unstable nixos-unstable + <nixos-unstable/nixos/modules/services/databases/postgresql.nix> + ]; + + services.postgresql.enable = true; +} + + +This example shows how to define a custom module as a + replacement for an existing module. Importing this module will + disable the original module without having to know it's + implementation details. + + +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.programs.man; +in + +{ + disabledModules = [ "services/programs/man.nix" ]; + + options = { + programs.man.enable = mkOption { + type = types.bool; + default = true; + description = "Whether to enable manual pages."; + }; + }; + + config = mkIf cfg.enabled { + warnings = [ "disabled manpages for production deployments." ]; + }; +} + + +
diff --git a/nixos/doc/manual/development/writing-modules.xml b/nixos/doc/manual/development/writing-modules.xml index ef6920160e6..5bdcad5ceb5 100644 --- a/nixos/doc/manual/development/writing-modules.xml +++ b/nixos/doc/manual/development/writing-modules.xml @@ -179,5 +179,6 @@ in { + diff --git a/nixos/doc/manual/release-notes/rl-1703.xml b/nixos/doc/manual/release-notes/rl-1703.xml index 38693437059..e9d3a65e3ba 100644 --- a/nixos/doc/manual/release-notes/rl-1703.xml +++ b/nixos/doc/manual/release-notes/rl-1703.xml @@ -261,6 +261,16 @@ following incompatible changes: + + + Modules can now be disabled by using + disabledModules, allowing another to take it's place. This can be + used to import a set of modules from another channel while keeping the + rest of the system on a stable release. + + + From 37705ac1b1faa0e613d043da51ad00ea37b85966 Mon Sep 17 00:00:00 2001 From: Daiderd Jordan Date: Wed, 22 Feb 2017 21:56:19 +0100 Subject: [PATCH 212/216] use relative path for module tests --- lib/tests/modules/default.nix | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/tests/modules/default.nix b/lib/tests/modules/default.nix index 5be3af0ffe8..5b094710419 100644 --- a/lib/tests/modules/default.nix +++ b/lib/tests/modules/default.nix @@ -1,4 +1,4 @@ -{ lib ? import , modules ? [] }: +{ lib ? import ../.., modules ? [] }: { inherit (lib.evalModules { From d348b80f318388045dc3306a35531b2a7b3b6c4c Mon Sep 17 00:00:00 2001 From: Benjamin Staffin Date: Mon, 27 Feb 2017 19:22:37 -0500 Subject: [PATCH 213/216] bazel: Log test errors to stderr during checkPhase Otherwise it's difficult or impossible to retrieve them, particularly from a hydra build. --- pkgs/development/tools/build-managers/bazel/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/tools/build-managers/bazel/default.nix b/pkgs/development/tools/build-managers/bazel/default.nix index 195041f4b28..65c9480b114 100644 --- a/pkgs/development/tools/build-managers/bazel/default.nix +++ b/pkgs/development/tools/build-managers/bazel/default.nix @@ -54,8 +54,8 @@ stdenv.mkDerivation rec { doCheck = true; checkPhase = '' export TEST_TMPDIR=$(pwd) - ./output/bazel test examples/cpp:hello-success_test - ./output/bazel test examples/java-native/src/test/java/com/example/myproject:hello + ./output/bazel test --test_output=errors examples/cpp:hello-success_test + ./output/bazel test --test_output=errors examples/java-native/src/test/java/com/example/myproject:hello ''; installPhase = '' From 9431e49822eca4829c3075d993d77e10df88bf57 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Mon, 27 Feb 2017 18:57:26 +0000 Subject: [PATCH 214/216] ocamlPackages.ppx_tools: init at 5.0+4.05 --- pkgs/development/ocaml-modules/ppx_tools/default.nix | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/pkgs/development/ocaml-modules/ppx_tools/default.nix b/pkgs/development/ocaml-modules/ppx_tools/default.nix index ddc3dec898d..5672300ddab 100644 --- a/pkgs/development/ocaml-modules/ppx_tools/default.nix +++ b/pkgs/development/ocaml-modules/ppx_tools/default.nix @@ -1,17 +1,20 @@ { stdenv, fetchFromGitHub, ocaml, findlib }: let param = { - "4.02.3" = { + "4.02" = { version = "5.0+4.02.0"; sha256 = "16drjk0qafjls8blng69qiv35a84wlafpk16grrg2i3x19p8dlj8"; }; - "4.03.0" = { + "4.03" = { version = "5.0+4.03.0"; sha256 = "061v1fl5z7z3ywi4ppryrlcywnvnqbsw83ppq72qmkc7ma4603jg"; }; - "4.04.0" = { + "4.04" = { version = "unstable-20161114"; rev = "49c08e2e4ea8fef88692cd1dcc1b38a9133f17ac"; sha256 = "0ywzfkf5brj33nwh49k9if8x8v433ral25f3nbklfc9vqr06zrfl"; }; -}."${ocaml.version}"; + "4.05" = { + version = "5.0+4.05.0"; + sha256 = "1jvvhk6wnkvm7b9zph309ihsc0hyxfpahmxxrq19vx8c674jsdm4"; }; +}."${ocaml.meta.branch}"; in stdenv.mkDerivation { name = "ocaml${ocaml.version}-ppx_tools-${param.version}"; From 52507b3a9b2f9055594886250994a73871061ca0 Mon Sep 17 00:00:00 2001 From: Vincent Laporte Date: Mon, 27 Feb 2017 19:11:29 +0000 Subject: [PATCH 215/216] ocamlPackages.ocp-build: 1.99.17-beta -> 1.99.18-beta --- pkgs/development/tools/ocaml/ocp-build/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/tools/ocaml/ocp-build/default.nix b/pkgs/development/tools/ocaml/ocp-build/default.nix index 503616511e5..931e6989aa1 100644 --- a/pkgs/development/tools/ocaml/ocp-build/default.nix +++ b/pkgs/development/tools/ocaml/ocp-build/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, ocaml, findlib, ncurses, buildOcaml }: let - version = "1.99.17-beta"; + version = "1.99.18-beta"; in buildOcaml { @@ -11,7 +11,7 @@ buildOcaml { owner = "OCamlPro"; repo = "ocp-build"; rev = version; - sha256 = "0k1gi5v9as5l8h5illgl5prsd5z1i14y5j2k920ay1a3rv697b02"; + sha256 = "14vzam8p1d2c5qxljrhsfppd8a3j9lxx8kzxlplwclkr2laar0ss"; }; buildInputs = [ ocaml ]; From 0d31a76813532a5a1a1d83b0f92c283206783f00 Mon Sep 17 00:00:00 2001 From: Alexey Shmalko Date: Tue, 28 Feb 2017 05:35:52 +0200 Subject: [PATCH 216/216] virtualbox: fix build The issue was caused by upgrading `qt` from `qt56` to `qt57`, which now requires C++11. For more info, see https://github.com/NixOS/nixpkgs/issues/23257. --- pkgs/applications/virtualization/virtualbox/default.nix | 1 + 1 file changed, 1 insertion(+) diff --git a/pkgs/applications/virtualization/virtualbox/default.nix b/pkgs/applications/virtualization/virtualbox/default.nix index 7512ddb6b0f..14121660fa8 100644 --- a/pkgs/applications/virtualization/virtualbox/default.nix +++ b/pkgs/applications/virtualization/virtualbox/default.nix @@ -66,6 +66,7 @@ in stdenv.mkDerivation { set -x sed -e 's@MKISOFS --version@MKISOFS -version@' \ -e 's@PYTHONDIR=.*@PYTHONDIR=${if pythonBindings then python else ""}@' \ + -e 's@CXX_FLAGS="\(.*\)"@CXX_FLAGS="-std=c++11 \1"@' \ ${optionalString (!headless) '' -e 's@TOOLQT5BIN=.*@TOOLQT5BIN="${getDev qt5.qtbase}/bin"@' \ ''} -i configure