From dbb4826457929842e2ae48eb4ad98cba976cd645 Mon Sep 17 00:00:00 2001 From: scalavision Date: Mon, 24 Feb 2020 17:58:21 +0100 Subject: [PATCH] truvari:1.3.2->1.3.4 --- pkgs/applications/science/biology/truvari/default.nix | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/pkgs/applications/science/biology/truvari/default.nix b/pkgs/applications/science/biology/truvari/default.nix index bee43da6719..e64c9d3493e 100644 --- a/pkgs/applications/science/biology/truvari/default.nix +++ b/pkgs/applications/science/biology/truvari/default.nix @@ -5,13 +5,13 @@ python3Packages.buildPythonApplication rec { pname = "truvari"; - version = "1.3.2"; + version = "1.3.4"; src = fetchFromGitHub { owner = "spiralgenetics"; repo = "truvari"; rev = "v${version}"; - sha256 = "0wmjz8nzibvj0ixky1m0qi7iyd204prk7glbvig1cvaab33k19f1"; + sha256 = "1bph7v48s7pyfagz8a2fzl5fycjliqzn5lcbv3m2bp2ih1f1gd1v"; }; propagatedBuildInputs = with python3Packages; [ @@ -25,8 +25,9 @@ python3Packages.buildPythonApplication rec { prePatch = '' substituteInPlace ./setup.py \ - --replace '"progressbar2==3.41.0",' "" \ - --replace '"pysam==0.15.2",' "" + --replace '"progressbar2==3.41.0",' '"progressbar2==3.47.0",' \ + --replace '"pysam==0.15.2",' '"pysam==0.15.4",' \ + --replace '"pyfaidx==0.5.5.2",' '"pyfaidx==0.5.8",' ''; meta = with lib; {