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Added ncbi-tools

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svn path=/nixpkgs/trunk/; revision=12003
This commit is contained in:
Pjotr Prins 2008-06-06 19:42:00 +00:00
parent bb2a310c5c
commit d78d018ad8
2 changed files with 25 additions and 0 deletions
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21
pkgs/development/libraries/science/biology/ncbi-tools/default.nix Normal file
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@ -0,0 +1,21 @@
{stdenv, fetchurl, cpio}:
# Note: may need the C-libs at ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/Mar_17_2008/NCBI_C_Toolkit/ncbi_c--Mar_17_2008.tar.gz (or split out?)
stdenv.mkDerivation rec {
name = "ncbi_cxx";
ncbi_version = "Mar_17_2008";
src = fetchurl {
url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/${ncbi_version}/ncbi_cxx--${ncbi_version}.tar.gz";
sha256 = "0mxbmz6gndallz8l5jdslq6illa3hgf31xi2yb984mqm9in485as";
};
configureFlags = "--without-debug --with-bin-release --with-dll --without-static";
buildInputs = [cpio];
meta = {
description = ''NCBI Bioinformatics toolbox'';
homepage = http://www.ncbi.nlm.nih.gov/IEB/ToolBox/;
license = "GPL";
};
}

4
pkgs/top-level/all-packages.nix
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@ -6814,6 +6814,10 @@ let pkgs = rec {
inherit fetchurl stdenv readline; inherit fetchurl stdenv readline;
}; };
ncbi_tools = import ../development/libraries/science/biology/ncbi-tools {
inherit fetchurl stdenv cpio;
};
paml = import ../applications/science/biology/paml { paml = import ../applications/science/biology/paml {
inherit fetchurl stdenv; inherit fetchurl stdenv;
}; };