From d3da5cbf449948e5b058cac5b19510c7c0955a55 Mon Sep 17 00:00:00 2001
From: mimadrid <mimadrid@ucm.es>
Date: Fri, 24 Jun 2016 15:08:16 +0200
Subject: [PATCH] htslib: init at 1.3.1

---
 .../science/biology/htslib/default.nix        | 23 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 25 insertions(+)
 create mode 100644 pkgs/development/libraries/science/biology/htslib/default.nix

diff --git a/pkgs/development/libraries/science/biology/htslib/default.nix b/pkgs/development/libraries/science/biology/htslib/default.nix
new file mode 100644
index 00000000000..2609861e319
--- /dev/null
+++ b/pkgs/development/libraries/science/biology/htslib/default.nix
@@ -0,0 +1,23 @@
+{ stdenv, fetchurl, zlib }:
+
+stdenv.mkDerivation rec {
+  name = "${pname}-${version}";
+  pname = "htslib";
+  version = "1.3.1";
+
+  src = fetchurl {
+    url = "https://github.com/samtools/${pname}/releases/download/${version}/${name}.tar.bz2";
+    sha256 = "49d53a2395b8cef7d1d11270a09de888df8ba06f70fe68282e8235ee04124ae6";
+  };
+
+  buildInputs = [ zlib ];
+
+  meta = with stdenv.lib; {
+    description = "A C library for reading/writing high-throughput sequencing data";
+    license = licenses.mit;
+    homepage = http://www.htslib.org/;
+    platforms = platforms.unix;
+    maintainers = [ maintainers.mimadrid ];
+  };
+}
+
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 65fced534a8..79718fc79e5 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -15885,6 +15885,8 @@ in
 
   emboss = callPackage ../applications/science/biology/emboss { };
 
+  htslib = callPackage ../development/libraries/science/biology/htslib { };
+
   neuron = callPackage ../applications/science/biology/neuron { };
 
   neuron-mpi = appendToName "mpi" (neuron.override {