Merge branch 'master' into staging

pkgs/development/libraries/catch/default.nix

@@ -1,15 +1,14 @@
-{ stdenv, cmake, fetchFromGitHub }:
+{ stdenv, fetchFromGitHub, cmake }:
 
 stdenv.mkDerivation rec {
-
   name = "catch-${version}";
-  version = "1.9.5";
+  version = "1.9.6";
 
   src = fetchFromGitHub {
     owner = "philsquared";
     repo = "Catch";
     rev = "v${version}";
-    sha256 = "1in4f6w1pja8m1hvyiwx7s7gxnj6nlj1fgxw9blldffh09ikgpm2";
+    sha256 = "0nqnyw6haa2771748ycag4hhjb8ni32cv4f7w3h0pji212542xan";
   };
 
   nativeBuildInputs = [ cmake ];

pkgs/development/libraries/gdal/default.nix

@@ -1,6 +1,6 @@
 { stdenv, fetchurl, composableDerivation, unzip, libjpeg, libtiff, zlib
 , postgresql, mysql, libgeotiff, pythonPackages, proj, geos, openssl
-, libpng, sqlite, libspatialite, poppler
+, libpng, sqlite, libspatialite, poppler, hdf4
 , libiconv
 , netcdfSupport ? true, netcdf, hdf5 , curl
 }:
@@ -17,15 +17,20 @@ composableDerivation.composableDerivation {} (fixed: rec {
   };
 
   buildInputs = [ unzip libjpeg libtiff libpng proj openssl sqlite
-    libspatialite poppler ]
+    libspatialite poppler hdf4 ]
   ++ (with pythonPackages; [ python numpy wrapPython ])
   ++ stdenv.lib.optional stdenv.isDarwin libiconv
   ++ stdenv.lib.optionals netcdfSupport [ netcdf hdf5 curl ];
 
   hardeningDisable = [ "format" ];
 
-  # Unset CC and CXX as they confuse libtool.
-  preConfigure = "unset CC CXX";
+  # - Unset CC and CXX as they confuse libtool.
+  # - teach gdal that libdf is the legacy name for libhdf
+  preConfigure = ''
+      unset CC CXX
+      substituteInPlace configure \
+      --replace "-lmfhdf -ldf" "-lmfhdf -lhdf"
+    '';
 
   configureFlags = [
     "--with-jpeg=${libjpeg.dev}"
@@ -41,6 +46,7 @@ composableDerivation.composableDerivation {} (fixed: rec {
     "--with-python"               # optional
     "--with-static-proj4=${proj}" # optional
     "--with-geos=${geos}/bin/geos-config"# optional
+    "--with-hdf4=${hdf4.dev}" # optional
     (if netcdfSupport then "--with-netcdf=${netcdf}" else "")
   ];
 

pkgs/development/libraries/libutempter/default.nix

@@ -13,6 +13,10 @@ stdenv.mkDerivation rec {
 
   buildInputs = [ glib ];
 
+  prePatch = ''
+    substituteInPlace Makefile --replace 2711 0711
+  '';
+
   installFlags = [
     "libdir=\${out}/lib"
     "libexecdir=\${out}/lib"

pkgs/development/libraries/openslp/default.nix

@@ -11,13 +11,13 @@ stdenv.mkDerivation {
   patches = [
     (fetchpatch {
       name = "openslp-2.0.0-null-pointer-deref.patch";
-      url = "https://svnweb.mageia.org/packages/cauldron/openslp/current/SOURCES/openslp-2.0.0-null-pointer-deref.patch?revision=1019712&view=co";
+      url = "https://src.fedoraproject.org/cgit/rpms/openslp.git/plain/openslp-2.0.0-null-pointer-deref.patch";
       sha256 = "186f3rj3z2lf5h1lpbhqk0szj2a9far1p3mjqg6422f29yjfnz6a";
     })
     (fetchpatch {
       name = "openslp-2.0.0-CVE-2016-7567.patch";
-      url = "https://svnweb.mageia.org/packages/cauldron/openslp/current/SOURCES/openslp-2.0.0-CVE-2016-7567.patch?revision=1057233&view=co";
-      sha256 = "1zrgql91vjjl2v7brlibc8jqndnjz9fclqbdn0b6fklkpwznprny";
+      url = "https://src.fedoraproject.org/cgit/rpms/openslp.git/plain/openslp-2.0.0-cve-2016-7567.patch";
+      sha256 = "0zp61axx93b7nrbsyhn2x4dnw7n9y6g4rys21hyqxk4khrnc2yr9";
     })
   ];
 

pkgs/development/libraries/wcslib/default.nix

@@ -11,6 +11,11 @@ stdenv.mkDerivation rec {
     sha256 ="1s2nig327g4bimd9xshlk11ww09a7mrjmsbpdcd8smsmn2kl1glb";
   };
 
+  prePatch = ''
+    substituteInPlace GNUmakefile --replace 2775 0775
+    substituteInPlace C/GNUmakefile --replace 2775 0775
+  '';
+
   enableParallelBuilding = true;
 
   meta = {