r-modules: update package set

This commit is contained in:
Peter Simons
2017-07-01 10:12:30 +02:00
parent 756e69bf97
commit b1ebe7a72c
5 changed files with 2334 additions and 2364 deletions

View File

@@ -495,7 +495,6 @@ let
"fscaret"
"fSRM"
"gcmr"
"Geneland"
"GeoGenetix"
"geomorph"
"geoR"
@@ -566,7 +565,6 @@ let
"plotSEMM"
"plsRbeta"
"plsRglm"
"pmg"
"PopGenReport"
"poppr"
"powerpkg"
@@ -682,560 +680,17 @@ let
];
packagesToSkipCheck = [
"Rmpi" # tries to run MPI processes
"gmatrix" # requires CUDA runtime
"Rmpi" # tries to run MPI processes
"gmatrix" # requires CUDA runtime
"gputools" # requires CUDA runtime
"sprint" # tries to run MPI processes
"pbdMPI" # tries to run MPI processes
"sprint" # tries to run MPI processes
"pbdMPI" # tries to run MPI processes
];
# Packages which cannot be installed due to lack of dependencies or other reasons.
brokenPackages = [
"acs" # build is broken
"agRee" # depends on broken package BRugs-0.8-6
"aLFQ" # depends on broken package bio3d-2.3-1
"anamiR" # depends on broken package RMySQL-0.10.11
"AneuFinder" # depends on broken package Rhtslib-1.6.0
"animation" # build is broken
"anim_plots" # depends on broken package animation-2.4
"annmap" # depends on broken package RMySQL-0.10.9
"apaStyle" # depends on broken package gdtools-0.1.3
"apaTables" # depends on broken package OpenMx-2.7.4
"aptg" # depends on broken package brranching-0.2.0
"ArrayExpressHTS" # build is broken
"arrayQualityMetrics" # build is broken
"auRoc" # depends on broken package OpenMx-2.7.4
"bamsignals" # depends on broken package Rhtslib-1.6.0
"BatchQC" # build is broken
"bayesCL" # build is broken
"bayou" # depends on broken package animation-2.4
"bedr" # build is broken
"BETS" # build is broken
"BiGGR" # depends on broken package rsbml-2.30.0
"bio3d" # build is broken
"bioassayR" # depends on broken package ChemmineR-2.24.2
"bioCancer" # depends on broken package covr-2.2.2
"biomformat" # depends on broken package r-rhdf5-2.16.0
"biotools" # depends on broken package rpanel-1.1-3
"birte" # build is broken
"BiSEp" # build is broken
"BLCOP" # depends on broken package Rsymphony-0.1-26
"BMhyd" # depends on broken package animation-2.4
"BNSP" # build is broken
"BPEC" # depends on broken package animation-2.4
"BrailleR" # depends on broken package gridGraphics-0.1-5
"brainGraph" # build is broken
"brranching" # depends on broken package animation-2.4
"brr" # build is broken
"BRugs" # build is broken
"CADStat" # build is broken
"CampaR1" # depends on broken package r-bio3d-2.3-1
"canceR" # build is broken
"CardinalWorkflows" # build is broken
"CARrampsOcl" # depends on broken package OpenCL-0.1-3
"categoryCompare" # depends on broken package RCytoscape-1.21.1
"Causata" # depends on broken package RMySQL-0.10.9
"cdcfluview" # depends on broken package V8-1.2
"CexoR" # depends on broken package Rhtslib-1.6.0
"ChAMP" # depends on broken package goseq-1.26.0
"ChemmineDrugs" # depends on broken package ChemmineR-2.24.2
"ChemmineR" # build is broken
"chinese_misc" # build is broken
"ChIPQC" # depends on broken package r-DiffBind-2.0.9
"ChIPXpress" # build is broken
"ChIPXpressData" # build is broken
"choroplethr" # depends on broken package acs-2.0
"CHRONOS" # build is broken
"cleanEHR" # build is broken
"clickR" # depends on broken package gdtools-0.1.3
"clpAPI" # build is broken
"CNEr" # build is broken
"colormap" # depends on broken package V8-1.2
"colorscience" # build is broken
"compendiumdb" # depends on broken package RMySQL-0.10.9
"CONFESS" # depends on broken package r-flowCore-1.38.2
"CONS" # build is broken
"convevol" # depends on broken package animation-2.4
"CountClust" # build is broken
"CountsEPPM" # build is broken
"COUSCOus" # depends on broken package r-bio3d-2.3-1
"covr" # build is broken
"cplexAPI" # build is broken
"Crossover" # build is broken
"CrypticIBDcheck" # build is broken
"csaw" # build is broken
"ctsem" # depends on broken package OpenMx-2.7.4
"cudaBayesreg" # build is broken
"cytofkit" # depends on broken package flowCore-1.38.2
"CytoML" # depends on broken package flowCore-1.40.6
"daff" # depends on broken package V8-1.2
"dagbag" # build is broken
"dagitty" # depends on broken package V8-1.2
"dagLogo" # depends on broken package MotIV-1.28.0
"DAISIE" # depends on broken package animation-2.4
"DataEntry" # build is broken
"dataMaid" # build is broken
"dataone" # build is broken
"datapack" # build is broken
"dbConnect" # depends on broken package RMySQL-0.10.9
"DBKGrad" # depends on broken package rpanel-1.1-3
"DCM" # build is broken
"DDD" # depends on broken package animation-2.4
"deBInfer" # depends on broken package PBSddesolve-1.12.2
"debrowser" # depends on broken package V8-1.4
"DecisionCurve" # build is broken
"DeepBlueR" # build is broken
"deepSNV" # build is broken
"DEGraph" # depends on broken package RCytoscape-1.21.1
"DEploid" # build is broken
"DiagrammeRsvg" # depends on broken package V8-1.2
"DiffBind" # build is broken
"diffHic" # depends on broken package r-csaw-1.6.1
"DirichletMultinomial" # build is broken
"diveRsity" # build is broken
"DmelSGI" # depends on broken package r-rhdf5-2.16.0
"docxtools" # build is broken
"DOQTL" # depends on broken package r-rhdf5-2.16.0
"DOT" # depends on broken package V8-1.2
"dynr" # build is broken
"ecospat" # depends on broken package MigClim-1.6
"EGAD" # depends on broken package arrayQualityMetrics-3.28.2
"eiR" # depends on broken package ChemmineR-2.24.2
"emg" # build is broken
"envlpaster" # build is broken
"erpR" # depends on broken package rpanel-1.1-3
"euroMix" # build is broken
"evobiR" # depends on broken package animation-2.4
"exifr" # build is broken
"ExperimentHubData" # build is broken
"exprso" # build is broken
"fastR" # build is broken
"fCCAC" # depends on broken package Rhtslib-1.6.0
"fdq" # depends on broken package gdtools-0.1.3
"Fgmutils" # depends on broken package gdtools-0.1.3
"flan" # build is broken
"flextable" # depends on broken package gdtools-0.1.4
"flowAI" # depends on broken package r-flowCore-1.38.2
"flowBeads" # depends on broken package r-flowCore-1.38.2
"flowBin" # depends on broken package r-flowCore-1.38.2
"flowCHIC" # depends on broken package r-flowCore-1.38.2
"flowClean" # depends on broken package r-flowCore-1.38.2
"flowClust" # depends on broken package r-flowCore-1.38.2
"flowCore" # build is broken
"flowDensity" # depends on broken package flowCore-1.38.2
"flowDiv" # depends on broken package r-flowCore-1.38.2
"flowFit" # depends on broken package r-flowCore-1.38.2
"flowFitExampleData" # depends on broken package r-flowCore-1.38.2
"flowFP" # depends on broken package r-flowCore-1.38.2
"flowMatch" # depends on broken package r-flowCore-1.38.2
"flowMeans" # depends on broken package r-flowCore-1.38.2
"flowMerge" # depends on broken package r-flowCore-1.38.2
"flowPeaks" # build is broken
"flowPloidy" # depends on broken package flowCore-1.40.6
"flowQB" # depends on broken package r-flowCore-1.38.2
"flowQ" # depends on broken package flowCore-1.38.2
"FlowSOM" # depends on broken package r-flowCore-1.38.2
"flowStats" # depends on broken package r-flowCore-1.38.2
"flowTrans" # depends on broken package r-flowCore-1.38.2
"flowType" # depends on broken package r-flowCore-1.38.2
"flowUtils" # depends on broken package r-flowCore-1.38.2
"flowViz" # depends on broken package r-flowCore-1.38.2
"flowVS" # depends on broken package r-flowCore-1.38.2
"flowWorkspace" # depends on broken package r-flowCore-1.38.2
"fmcsR" # depends on broken package ChemmineR-2.24.2
"fPortfolio" # depends on broken package Rsymphony-0.1-26
"fracprolif" # build is broken
"funModeling" # build is broken
"gahgu133acdf" # build is broken
"gahgu133bcdf" # build is broken
"gahgu133plus2cdf" # build is broken
"gahgu95av2cdf" # build is broken
"gahgu95bcdf" # build is broken
"gahgu95ccdf" # build is broken
"gahgu95dcdf" # build is broken
"gahgu95ecdf" # build is broken
"gamlss_demo" # depends on broken package rpanel-1.1-3
"gazepath" # build is broken
"gdtools" # build is broken
"GENE_E" # depends on broken package r-rhdf5-2.16.0
"GenoGAM" # build is broken
"genomation" # depends on broken package Rhtslib-1.6.0
"geojson" # depends on broken package r-protolite-1.5
"geojsonio" # depends on broken package V8-1.2
"geojsonlint" # depends on broken package V8-1.2
"gfcanalysis" # depends on broken package animation-2.4
"gfer" # depends on broken package V8-1.2
"ggcyto" # depends on broken package r-flowCore-1.38.2
"ggghost" # depends on broken package animation-2.4
"ggimage" # depends on broken package gridGraphics-0.1-5
"ggiraph" # depends on broken package gdtools-0.1.3
"ggiraphExtra" # depends on broken package gdtools-0.1.3
"ggseas" # build is broken
"gmapR" # build is broken
"gmatrix" # depends on broken package cudatoolkit-8.0.61
"gMCP" # build is broken
"gmDatabase" # depends on broken package RMySQL-0.10.9
"gmum_r" # build is broken
"googleformr" # build is broken
"goseq" # build is broken
"gpg" # build is broken
"gpuR" # build is broken
"gputools" # depends on broken package cudatoolkit-8.0.61
"GraphPAC" # build is broken
"greengenes13_5MgDb" # build is broken
"gridGraphics" # build is broken
"GSCA" # depends on broken package r-rhdf5-2.16.0
"GUIDE" # depends on broken package rpanel-1.1-3
"gunsales" # build is broken
"h2o" # build is broken
"h5vc" # depends on broken package r-rhdf5-2.16.0
"harrietr" # build is broken
"HDF5Array" # depends on broken package r-rhdf5-2.16.0
"healthyFlowData" # depends on broken package r-flowCore-1.38.2
"hexSticker" # depends on broken package gridGraphics-0.1-5
"HierO" # build is broken
"HilbertVisGUI" # build is broken
"HiPLARM" # build is broken
"hisse" # depends on broken package animation-2.4
"hoardeR" # depends on broken package Rhtslib-1.6.0
"homomorpheR" # depends on broken package sodium-0.4
"HTSeqGenie" # depends on broken package gmapR-1.16.0
"HTSSIP" # depends on broken package r-rhdf5-2.16.0
"idm" # depends on broken package animation-2.4
"ifaTools" # depends on broken package OpenMx-2.7.4
"IHW" # depends on broken package r-lpsymphony-1.0.2
"IHWpaper" # depends on broken package r-lpsymphony-1.0.2
"IlluminaHumanMethylation450k_db" # build is broken
"immunoClust" # depends on broken package r-flowCore-1.38.2
"imputeR" # depends on broken package ridge-2.2
"intansv" # build is broken
"interactiveDisplay" # build is broken
"ionicons" # depends on broken package rsvg-1.0
"IONiseR" # depends on broken package r-rhdf5-2.16.0
"ITGM" # depends on broken package gdtools-0.1.3
"jpmesh" # depends on broken package V8-1.2
"js" # depends on broken package V8-1.2
"jsonld" # depends on broken package V8-1.2
"jsonvalidate" # depends on broken package V8-1.2
"KoNLP" # build is broken
"largeList" # build is broken
"largeVis" # build is broken
"lavaan_shiny" # depends on broken package OpenMx-2.7.10
"lawn" # depends on broken package V8-1.2
"LCMCR" # build is broken
"LeArEst" # depends on broken package opencpu-1.6.1
"lefse" # build is broken
"lfe" # build is broken
"lgcp" # depends on broken package rpanel-1.1-3
"Libra" # build is broken
"libsoc" # build is broken
"link2GI" # depends on broken package r-sf-0.3-4
"LinRegInteractive" # depends on broken package rpanel-1.1-3
"liquidSVM" # build is broken
"littler" # build is broken
"LowMACA" # depends on broken package MotIV-1.28.0
"lpsymphony" # build is broken
"lvnet" # depends on broken package OpenMx-2.7.4
"MafDb_1Kgenomes_phase3_hs37d5" # build is broken
"mafs" # build is broken
"magick" # build is broken
"maGUI" # build is broken
"mapr" # depends on broken package V8-1.2
"mar1s" # build is broken
"MatrixRider" # depends on broken package CNEr-1.8.3
"MBESS" # depends on broken package OpenMx-2.7.4
"mBvs" # build is broken
"mcaGUI" # build is broken
"mcPAFit" # build is broken
"mdsr" # depends on broken package RMySQL-0.10.9
"Mediana" # depends on broken package gdtools-0.1.3
"melviewr" # build is broken
"MeSH_Hsa_eg_db" # build is broken
"MeSH_Mmu_eg_db" # build is broken
"meshr" # depends on broken package r-MeSH.Hsa.eg.db-1.6.0
"Metab" # build is broken
"metagear" # build is broken
"MetaIntegrator" # depends on broken package RMySQL-0.10.9
"metaSEM" # depends on broken package OpenMx-2.7.4
"methylKit" # depends on broken package Rhtslib-1.6.0
"MigClim" # build is broken
"minimist" # depends on broken package V8-1.2
"miscF" # depends on broken package BRugs-0.8-6
"mixlink" # build is broken
"MLSeq" # build is broken
"mmnet" # build is broken
"MODIStsp" # build is broken
"MonetDBLite" # build is broken
"mongolite" # build is broken
"monogeneaGM" # depends on broken package animation-2.4
"MonoPhy" # depends on broken package animation-2.4
"motifbreakR" # depends on broken package MotIV-1.28.0
"motifStack" # depends on broken package MotIV-1.28.0
"MotIV" # build is broken
"mptools" # depends on broken package animation-2.4
"mrMLM" # build is broken
"mRMRe" # build is broken
"mscstexta4r" # build is broken
"mscsweblm4r" # build is broken
"MSeasyTkGUI" # build is broken
"MSGFgui" # depends on broken package MSGFplus-1.6.2
"MSGFplus" # build is broken
"multiDimBio" # depends on broken package gridGraphics-0.1-5
"multipanelfigure" # depends on broken package gridGraphics-0.1-5
"munsellinterpol" # build is broken
"mutossGUI" # build is broken
"mvMORPH" # depends on broken package animation-2.4
"mvst" # build is broken
"ncdfFlow" # depends on broken package r-flowCore-1.38.2
"NCIgraph" # depends on broken package RCytoscape-1.21.1
"ndjson" # build is broken
"ndtv" # depends on broken package animation-2.4
"NetRep" # depends on broken package r-RhpcBLASctl-0.15-148
"networkBMA" # build is broken
"nlts" # build is broken
"normr" # depends on broken package Rhtslib-1.6.0
"NORRRM" # build is broken
"odbc" # build is broken
"officer" # depends on broken package gdtools-0.1.3
"OpenCL" # build is broken
"opencpu" # depends on broken package r-protolite-1.5
"openCyto" # depends on broken package r-flowCore-1.38.2
"OpenMx" # build is broken
"optbdmaeAT" # build is broken
"optBiomarker" # depends on broken package rpanel-1.1-3
"optrcdmaeAT" # build is broken
"ora" # depends on broken package ROracle-1.3-1
"OUwie" # depends on broken package animation-2.4
"PAA" # build is broken
"paleotree" # depends on broken package animation-2.4
"PathoStat" # depends on broken package BatchQC-1.2.1
"PathSelectMP" # build is broken
"PatternClass" # build is broken
"PBD" # depends on broken package animation-2.4
"PBSddesolve" # build is broken
"PBSmapping" # build is broken
"pcadapt" # depends on broken package vcfR-1.4.0
"pcaL1" # build is broken
"pcaPA" # build is broken
"pcrsim" # build is broken
"pdfsearch" # build is broken
"pdftools" # build is broken
"pd_genomewidesnp_6" # build is broken
"permGPU" # build is broken
"PGA" # build is broken
"PGPC" # depends on broken package ChemmineR-2.24.2
"ph2bye" # depends on broken package animation-2.4
"PharmacoGx" # build is broken
"PhyInformR" # depends on broken package animation-2.4
"phylocurve" # depends on broken package animation-2.4
"phyloseq" # depends on broken package r-rhdf5-2.16.0
"PhySortR" # depends on broken package animation-2.4
"phytools" # depends on broken package animation-2.4
"PICS" # build is broken
"PING" # depends on broken package PICS-2.16.0
"plateCore" # depends on broken package r-flowCore-1.38.2
"plfMA" # build is broken
"plink" # build is broken
"podkat" # build is broken
"PottsUtils" # depends on broken package BRugs-0.8-6
"powell" # build is broken
"pqsfinder" # depends on broken package r-flowCore-1.38.2
"prebs" # depends on broken package r-rhdf5-2.16.0
"PREDAsampledata" # depends on broken package gahgu133plus2cdf-2.2.1
"predictionInterval" # depends on broken package OpenMx-2.7.4
"pRoloc" # build is broken
"pRolocGUI" # build is broken
"proteoQC" # build is broken
"protolite" # build is broken
"prototest" # build is broken
"PSAboot" # build is broken
"psbcGroup" # build is broken
"PythonInR" # build is broken
"qcmetrics" # build is broken
"QFRM" # build is broken
"qrqc" # build is broken
"qtbase" # build is broken
"qtpaint" # build is broken
"qtutils" # build is broken
"QUALIFIER" # depends on broken package r-flowCore-1.38.2
"QuartPAC" # build is broken
"QuasR" # build is broken
"QUBIC" # build is broken
"QVM" # build is broken
"raincpc" # build is broken
"rainfreq" # build is broken
"RAM" # depends on broken package animation-2.4
"RamiGO" # depends on broken package RCytoscape-1.21.1
"randomcoloR" # depends on broken package V8-1.2
"randstr" # build is broken
"RapidPolygonLookup" # depends on broken package PBSmapping-2.69.76
"RAppArmor" # build is broken
"raptr" # depends on broken package PBSmapping-2.69.76
"RbioRXN" # depends on broken package ChemmineR-2.24.2
"Rblpapi" # build is broken
"RCAS" # depends on broken package Rhtslib-1.6.0
"Rchemcpp" # depends on broken package ChemmineR-2.24.2
"rchess" # depends on broken package V8-1.2
"RchivalTag" # depends on broken package PBSmapping-2.69.76
"RchyOptimyx" # depends on broken package r-flowCore-1.38.2
"RcmdrPlugin_FuzzyClust" # build is broken
"RcmdrPlugin_PcaRobust" # build is broken
"Rcpi" # depends on broken package ChemmineR-2.24.2
"Rcplex" # build is broken
"RcppAPT" # build is broken
"RcppGetconf" # build is broken
"RcppOctave" # build is broken
"RcppRedis" # build is broken
"rcqp" # build is broken
"rcrypt" # build is broken
"RCytoscape" # build is broken
"rdataretriever" # build is broken
"rDEA" # build is broken
"RDieHarder" # build is broken
"REBayes" # depends on broken package Rmosek-1.2.5.1
"recluster" # depends on broken package animation-2.4
"redland" # build is broken
"remoter" # build is broken
"repijson" # depends on broken package V8-1.2
"replicationInterval" # depends on broken package OpenMx-2.7.4
"ReporteRs" # depends on broken package gdtools-0.1.3
"ReQON" # depends on broken package seqbias-1.20.0
"RforProteomics" # depends on broken package interactiveDisplay-1.10.2
"rgbif" # depends on broken package V8-1.2
"Rgnuplot" # build is broken
"rgp" # build is broken
"rgpui" # depends on broken package rgp-0.4-1
"rgsepd" # depends on broken package goseq-1.26.0
"rhdf5" # build is broken
"RhpcBLASctl" # build is broken
"Rhtslib" # build is broken
"ridge" # build is broken
"rjade" # depends on broken package V8-1.2
"rJPSGCS" # build is broken
"RKEEL" # depends on broken package RKEELjars-1.0.15
"RKEELjars" # build is broken
"Rknots" # depends on broken package r-bio3d-2.3-1
"rLindo" # build is broken
"rlo" # depends on broken package PythonInR-0.1-3
"RMallow" # build is broken
"rmapshaper" # depends on broken package V8-1.2
"rMAT" # build is broken
"Rmosek" # build is broken
"rmumps" # build is broken
"RMySQL" # build is broken
"rnaturalearth" # depends on broken package sf-0.4-1
"RnavGraph" # build is broken
"rnetcarto" # build is broken
"ROI_plugin_clp" # depends on broken package clpAPI-1.2.7
"ROI_plugin_cplex" # depends on broken package Rcplex-0.3-3
"ROI_plugin_symphony" # depends on broken package Rsymphony-0.1-26
"ROracle" # build is broken
"RPA" # depends on broken package r-rhdf5-2.16.0
"RPANDA" # depends on broken package animation-2.4
"rpanel" # build is broken
"rpg" # build is broken
"Rphylopars" # depends on broken package animation-2.4
"Rpoppler" # build is broken
"RQuantLib" # build is broken
"Rsampletrees" # build is broken
"RSAP" # build is broken
"rsbml" # build is broken
"RSCABS" # build is broken
"rscala" # build is broken
"Rsomoclu" # build is broken
"rsparkling" # depends on broken package h2o-3.10.3.6
"rsvg" # build is broken
"Rsymphony" # build is broken
"rtable" # depends on broken package gdtools-0.1.3
"rTANDEM" # build is broken
"Rtextrankr" # build is broken
"rUnemploymentData" # depends on broken package acs-2.0
"rvg" # depends on broken package gdtools-0.1.3
"RVideoPoker" # depends on broken package rpanel-1.1-3
"rzmq" # build is broken
"s2" # build is broken
"sapFinder" # build is broken
"sbrl" # build is broken
"SC3" # depends on broken package scater-1.2.0
"scater" # depends on broken package r-rhdf5-2.16.0
"scran" # depends on broken package r-rhdf5-2.16.0
"SDD" # depends on broken package rpanel-1.1-3
"seasonal" # build is broken
"seasonalview" # build is broken
"Sejong" # build is broken
"SemiCompRisks" # build is broken
"semPlot" # depends on broken package OpenMx-2.7.10
"semtree" # depends on broken package OpenMx-2.7.4
"seqbias" # build is broken
"SeqGrapheR" # build is broken
"seqTools" # build is broken
"sf" # build is broken
"shazam" # build is broken
"shinyTANDEM" # build is broken
"SICtools" # build is broken
"SigTree" # depends on broken package r-rhdf5-2.16.0
"SimInf" # build is broken
"simsalapar" # build is broken
"smapr" # depends on broken package r-rhdf5-2.16.0
"SMITE" # depends on broken package goseq-1.26.0
"SnakeCharmR" # build is broken
"sodium" # build is broken
"soilphysics" # depends on broken package rpanel-1.1-3
"sortinghat" # build is broken
"spdynmod" # depends on broken package animation-2.4
"spocc" # depends on broken package V8-1.2
"spongecake" # build is broken
"srd" # depends on broken package animation-2.4
"SSDM" # build is broken
"stagePop" # depends on broken package PBSddesolve-1.12.2
"Starr" # build is broken
"stream" # depends on broken package animation-2.4
"streamMOA" # depends on broken package animation-2.4
"stremr" # build is broken
"subspaceMOA" # depends on broken package animation-2.4
"svglite" # depends on broken package gdtools-0.1.3
"sybilSBML" # build is broken
"SymTS" # build is broken
"synthACS" # depends on broken package acs-2.0
"tcpl" # depends on broken package RMySQL-0.10.9
"TDA" # build is broken
"TED" # depends on broken package animation-2.4
"tesseract" # build is broken
"texPreview" # depends on broken package magick-0.4
"textreadr" # build is broken
"textTinyR" # build is broken
"TFBSTools" # depends on broken package CNEr-1.8.3
"tilegramsR" # depends on broken package sf-0.4-1
"TKF" # depends on broken package animation-2.4
"tmap" # depends on broken package V8-1.2
"tmaptools" # depends on broken package V8-1.2
"tofsims" # build is broken
"toxboot" # depends on broken package RMySQL-0.10.9
"TransView" # build is broken
"treatSens" # build is broken
"treeplyr" # depends on broken package animation-2.4
"TSMySQL" # depends on broken package RMySQL-0.10.9
"uaparserjs" # depends on broken package V8-1.2
"UBCRM" # build is broken
"uHMM" # build is broken
"umx" # depends on broken package OpenMx-2.7.4
"userfriendlyscience" # depends on broken package OpenMx-2.7.4
"V8" # build is broken
"VariantTools" # depends on broken package gmapR-1.16.0
"VBmix" # build is broken
"vcfR" # build is broken
"vdiffr" # depends on broken package gdtools-0.1.3
"vmsbase" # depends on broken package PBSmapping-2.69.76
"wallace" # depends on broken package V8-1.2
"wand" # build is broken
"WebGestaltR" # depends on broken package PythonInR-0.1-3
"webp" # build is broken
"wordbankr" # depends on broken package RMySQL-0.10.9
"x13binary" # build is broken
"x_ent" # depends on broken package r-protolite-1.5
"xps" # build is broken
"xslt" # build is broken
"zoon" # build is broken
"gputools" # depends on non-free cudatoolkit-8.0.61
"gmatrix" # depends on non-free cudatoolkit-8.0.61
];
otherOverrides = old: new: {