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r-modules: remedy remaining Hydra failures

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This commit is contained in:
Peter Simons 2015-03-28 23:51:20 +01:00
parent a0b8150e11
commit aed1895643
1 changed files with 10 additions and 0 deletions
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10
pkgs/development/r-modules/default.nix
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@ -436,6 +436,7 @@ let
"PBSadmb" "PBSadmb"
"PBSmodelling" "PBSmodelling"
"PCPS" "PCPS"
"PKgraph"
"PopGenReport" "PopGenReport"
"PredictABEL" "PredictABEL"
"PrevMap" "PrevMap"
@ -664,6 +665,7 @@ let
"babel" # requires edgeR "babel" # requires edgeR
"BACA" # requires RDAVIDWebService "BACA" # requires RDAVIDWebService
"BcDiag" # requires fabia "BcDiag" # requires fabia
"beadarrayMSV" # requires Biobase, geneplotter, andlimma
"bdvis" # requres taxize "bdvis" # requres taxize
"beadarrayFilter" # requires beadarray "beadarrayFilter" # requires beadarray
"bigGP" # requires MPI running. HELP WANTED! "bigGP" # requires MPI running. HELP WANTED!
@ -679,6 +681,7 @@ let
"CARrampsOcl" # depends on OpenCL "CARrampsOcl" # depends on OpenCL
"CHAT" # requires DNAcopy "CHAT" # requires DNAcopy
"ChemoSpec" # depends on broken speaq "ChemoSpec" # depends on broken speaq
"Crossover" # fails self-test
"classGraph" # requires graph, and Rgraphviz "classGraph" # requires graph, and Rgraphviz
"clpAPI" # requires clp "clpAPI" # requires clp
"compendiumdb" # requires Biobase "compendiumdb" # requires Biobase
@ -733,6 +736,7 @@ let
"gmatrix" # depends on proprietary cudatoolkit "gmatrix" # depends on proprietary cudatoolkit
"GOGANPA" # requires WGCNA "GOGANPA" # requires WGCNA
"gputools" # depends on proprietary cudatoolkit "gputools" # depends on proprietary cudatoolkit
"gMCP" # fails self-test
"gRain" # requires gRbase "gRain" # requires gRbase
"gRapHD" # requires graph "gRapHD" # requires graph
"gRbase" # requires RBGL, and graph "gRbase" # requires RBGL, and graph
@ -805,7 +809,9 @@ let
"optBiomarker" # requires rpanel "optBiomarker" # requires rpanel
"ora" # requires ROracle "ora" # requires ROracle
"orQA" # requires genefilter "orQA" # requires genefilter
"pRF" # requires multtest
"PBSmapping" # fails its test suite for unclear reasons "PBSmapping" # fails its test suite for unclear reasons
"PBSddesolve" # fails its test suite for unclear reasons
"PairViz" # requires graph "PairViz" # requires graph
"PANDA" # requires GO.db "PANDA" # requires GO.db
"ParDNAcopy" # requires DNAcopy "ParDNAcopy" # requires DNAcopy
@ -874,6 +880,8 @@ let
"rpanel" # I could not make Tcl to recognize BWidget. HELP WANTED! "rpanel" # I could not make Tcl to recognize BWidget. HELP WANTED!
"RQuantLib" # requires QuantLib "RQuantLib" # requires QuantLib
"RSAP" # requires SAPNWRFCSDK "RSAP" # requires SAPNWRFCSDK
"rgp" # fails self-test
"rgpui" # depends on broken rgp
"RSeed" # requires RBGL, and graph "RSeed" # requires RBGL, and graph
"rsig" # requires survcomp "rsig" # requires survcomp
"RSNPset" # requires qvalue "RSNPset" # requires qvalue
@ -909,6 +917,8 @@ let
"spocc" # requires leafletR "spocc" # requires leafletR
"SQDA" # requires limma "SQDA" # requires limma
"Statomica" # requires Biobase, multtest "Statomica" # requires Biobase, multtest
"stagePop" # depends on broken PBSddesolve
"SeqGrapheR" # depends on Biostrings
"stpp" # requires spatstat "stpp" # requires spatstat
"structSSI" # requires multtest "structSSI" # requires multtest
"strum" # requires Rgraphviz "strum" # requires Rgraphviz