Merge master into staging-next

This commit is contained in:
Frederik Rietdijk
2018-07-21 19:43:53 +02:00
2090 changed files with 4329 additions and 3730 deletions

View File

@@ -2,7 +2,6 @@
, stdenv
, buildPythonPackage
, fetchPypi
, isPy3k
, python
, glibcLocales
, pkgconfig

View File

@@ -1,5 +1,4 @@
{lib, buildPythonPackage, fetchPypi, isPy3k, incremental, ipaddress, twisted
, automat, zope_interface, idna, pyopenssl, service-identity, pytest, mock, lsof
{lib, buildPythonPackage, fetchPypi
, geoip, nose}:
buildPythonPackage rec {

View File

@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, fetchPypi, isPy3k }:
{ buildPythonPackage, fetchPypi, isPy3k }:
buildPythonPackage rec {
pname = "JPype1";

View File

@@ -1,4 +1,4 @@
{ stdenv, fetchPypi, buildPythonPackage, fetchFromGitHub, python, gnugrep }:
{ stdenv, buildPythonPackage, fetchFromGitHub, python, gnugrep }:
let

View File

@@ -9,7 +9,6 @@
, isPy3k
, nose
, numpy
, pydot_ng
, scipy
, six
, libgpuarray

View File

@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi
{ buildPythonPackage
, certbot
, nose
, cryptography

View File

@@ -1,4 +1,4 @@
{ lib, stdenv, buildPythonPackage, fetchPypi, aiohttp, jinja2, pytest, pytest-aiohttp }:
{ lib, buildPythonPackage, fetchPypi, aiohttp, jinja2, pytest, pytest-aiohttp }:
buildPythonPackage rec {
pname = "aiohttp-jinja2";

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@@ -1,4 +1,4 @@
{ lib, stdenv, buildPythonPackage, fetchPypi, pythonOlder
{ lib, buildPythonPackage, fetchPypi, pythonOlder
, typing, aiohttp
}:

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@@ -1,4 +1,4 @@
{ lib, stdenv, buildPythonPackage, fetchPypi, aiohttp }:
{ lib, buildPythonPackage, fetchPypi, aiohttp }:
buildPythonPackage rec {
pname = "aiohue";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPy3k, nose }:
{ buildPythonPackage, fetchPypi, isPy3k, nose }:
buildPythonPackage rec {
pname = "anyjson";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchdarcs, zope_interface, isPy3k }:
{ buildPythonPackage, fetchdarcs, zope_interface, isPy3k }:
buildPythonPackage rec {
pname = "python-application";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi
{ buildPythonPackage, fetchPypi
, boto }:
buildPythonPackage rec {

View File

@@ -1,5 +1,5 @@
{ buildPythonPackage, fetchPypi, lib,
coverage, dicttoxml, flake8, pexpect, prettytable, requests_toolbelt
dicttoxml, pexpect, prettytable, requests_toolbelt
}:
buildPythonPackage rec {
pname = "argcomplete";

View File

@@ -1,5 +1,4 @@
{ lib
, cffi
{ cffi
, six
, hypothesis
, pytest

View File

@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, pytest, requests, requests_oauthlib, six
{ buildPythonPackage, pytest, requests, requests_oauthlib, six
, fetchFromGitHub, responses, stdenv
}:

View File

@@ -1,7 +1,6 @@
{ lib
, fetchPypi
, buildPythonPackage
, pytestrunner
, pythonOlder
}:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPy33, pythonOlder }:
{ stdenv, buildPythonPackage, fetchPypi, pythonOlder }:
buildPythonPackage rec {
pname = "asyncio";

View File

@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, fetchPypi, fetchFromGitHub, pythonOlder, python }:
{ lib, buildPythonPackage, fetchPypi, pythonOlder, python }:
buildPythonPackage rec {
pname = "asynctest";

View File

@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, numpy, future, nose }:
{ stdenv, buildPythonPackage, fetchPypi, numpy, future }:
buildPythonPackage rec {
pname = "autograd";

View File

@@ -1,5 +1,5 @@
{ stdenv, fetchPypi
, buildPythonApplication, isPy27, python, pythonOlder
, buildPythonApplication, python, pythonOlder
, mock, nose, pathpy, pyhamcrest, pytest
, glibcLocales, parse, parse-type, six
, traceback2

View File

@@ -1,4 +1,4 @@
{ stdenv, python, fetchPypi, fetchurl, makeWrapper, unzip }:
{ stdenv, python, fetchPypi, makeWrapper, unzip }:
let
wheel_source = fetchPypi {

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@@ -1,5 +1,4 @@
{ lib
, buildPythonPackage
{ buildPythonPackage
, fetchPypi
, nose
, numpy

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, requests

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@@ -1,6 +1,5 @@
{ lib
, buildPythonPackage
, isPy3k
, fetchPypi
}:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPyPy }:
{ stdenv, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "cachetools";

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, pyserial

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchFromGitHub
, python

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@@ -1,7 +1,5 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, fetchFromGitHub
, nose
, can

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@@ -1,4 +1,4 @@
{ stdenv, fetchurl, wget, buildPythonPackage, isPy3k }:
{ stdenv, fetchurl, buildPythonPackage, isPy3k }:
with stdenv.lib;

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, isPy27, isPyPy, fetchPypi, libffi, pycparser, pytest }:
{ stdenv, buildPythonPackage, isPyPy, fetchPypi, libffi, pycparser, pytest }:
if isPyPy then null else buildPythonPackage rec {
pname = "cffi";

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@@ -1,5 +1,4 @@
{ lib
, buildPythonPackage
{ buildPythonPackage
, fetchPypi
, pytest
, coveralls

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@@ -1,4 +1,4 @@
{ stdenv, lib, python
{ stdenv, lib
, buildPythonPackage, fetchPypi, isPy3k
, filelock, protobuf, numpy, pytest, mock
, cupy, cudaSupport ? false

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@@ -1,5 +1,4 @@
{ lib
, buildPythonPackage
{ buildPythonPackage
, fetchPypi
, pytest
}:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi
{ buildPythonPackage, fetchPypi
, iowait, psutil, pyzmq, tornado, mock }:
buildPythonPackage rec {

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@@ -1,7 +1,7 @@
{ stdenv, fetchPypi, buildPythonPackage, pythonOlder, isPy3k
, pyperclip, six, pyparsing, vim, wcwidth, colorama
, contextlib2 ? null, subprocess32 ? null
, pytest, mock, which, fetchFromGitHub, glibcLocales
, contextlib2 ? null
, pytest, mock, which, glibcLocales
}:
buildPythonPackage rec {
pname = "cmd2";

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@@ -1,4 +1,4 @@
{ stdenv, fetchPypi, buildPythonPackage, pythonOlder
{ stdenv, buildPythonPackage, pythonOlder
, pyperclip, six, pyparsing, vim
, contextlib2 ? null, subprocess32 ? null
, pytest, mock, which, fetchFromGitHub, glibcLocales

View File

@@ -1,4 +1,4 @@
{ lib, stdenv, buildPythonPackage, fetchPypi, requests-cache }:
{ lib, buildPythonPackage, fetchPypi, requests-cache }:
buildPythonPackage rec {
pname = "coinmarketcap";

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@@ -1,4 +1,4 @@
{ buildPythonPackage, fetchPypi, python, stdenv, nose
{ buildPythonPackage, fetchPypi, stdenv
}:
buildPythonPackage rec {

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@@ -1,4 +1,4 @@
{ stdenv, lib, buildPythonPackage, fetchPypi }:
{ lib, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "ConfigArgParse";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPy3k }:
{ stdenv, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "configparser";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchFromGitHub, six, pytest, pythonOlder }:
{ stdenv, buildPythonPackage, fetchFromGitHub, six, pytest }:
buildPythonPackage rec {
pname = "construct";

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@@ -1,7 +1,6 @@
{ lib
, buildPythonPackage
, fetchPypi
, isPy3k
, mock
}:

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@@ -1,4 +1,4 @@
{stdenv, lib, buildPythonPackage, fetchPypi, bash, which, writeText}:
{stdenv, lib, buildPythonPackage, fetchPypi, bash, which}:
buildPythonPackage rec {
version = "0.7";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, fetchpatch, cryptography, boto3, pyyaml, docutils, nose }:
{ stdenv, buildPythonPackage, fetchPypi, cryptography, boto3, pyyaml, docutils, nose }:
buildPythonPackage rec {
pname = "credstash";

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@@ -1,6 +1,5 @@
{ buildPythonPackage
, fetchPypi
, cryptography
}:
buildPythonPackage rec {

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@@ -1,4 +1,4 @@
{ stdenv, python, buildPythonPackage
{ stdenv, buildPythonPackage
, fetchPypi, isPy3k, linuxPackages, gcc5
, fastrlock, numpy, six, wheel, pytest, mock
, cudatoolkit, cudnn, nccl

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPyPy, isPy35, ncurses }:
{ stdenv, buildPythonPackage, fetchPypi, ncurses }:
buildPythonPackage rec {
pname = "cx_Freeze";

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@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, fetchFromGitHub, isPy3k
{ lib, buildPythonPackage, fetchFromGitHub
, decorator, requests, simplejson
, nose, mock }:

View File

@@ -1,4 +1,4 @@
{ lib, fetchPypi, buildPythonPackage, isPy3k
{ lib, fetchPypi, buildPythonPackage
, nose
, parameterized
, mock

View File

@@ -1,20 +0,0 @@
{ stdenv, buildPythonPackage, fetchPypi, isPy3k, six }:
buildPythonPackage rec {
pname = "python-dateutil";
version = "2.7.3";
disabled = isPy3k;
src = fetchPypi {
inherit pname version;
sha256 = "e27001de32f627c22380a688bcc43ce83504a7bc5da472209b4c70f02829f0b8";
};
propagatedBuildInputs = [ six ];
meta = with stdenv.lib; {
description = "Powerful extensions to the standard datetime module";
homepage = https://pypi.python.org/pypi/python-dateutil;
license = "BSD-style";
};
}

View File

@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi
{ buildPythonPackage, fetchPypi
, chardet, six}:
buildPythonPackage rec {

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi }:
{ buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "defusedxml";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, django }:
{ buildPythonPackage, fetchPypi, django }:
buildPythonPackage rec {
pname = "django-tagging";

View File

@@ -1,4 +1,4 @@
{ stdenv, fetchPypi, openssl, makeWrapper, buildPythonPackage
{ stdenv, fetchPypi, openssl, buildPythonPackage
, pytest, dnspython, pynacl, authres, python }:
buildPythonPackage rec {

View File

@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, pythonOlder }:
{ buildPythonPackage, fetchPypi, pythonOlder }:
buildPythonPackage rec {
pname = "dugong";

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@@ -1,5 +1,5 @@
{ stdenv, fetchPypi, buildPythonPackage, isPy3k, hidapi
, pycrypto, pillow, protobuf, future, ecpy
, pycrypto, pillow, protobuf, future
}:
buildPythonPackage rec {

View File

@@ -1,4 +1,4 @@
{ stdenv, lib, buildPythonPackage, fetchPypi, isPy3k, dnspython, idna, ipaddress }:
{ lib, buildPythonPackage, fetchPypi, isPy3k, dnspython, idna, ipaddress }:
buildPythonPackage rec {
pname = "email_validator";

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@@ -1,4 +1,4 @@
{ stdenv, fetchPypi, buildPythonPackage, fetchpatch }:
{ stdenv, fetchPypi, buildPythonPackage }:
buildPythonPackage rec {
pname = "faulthandler";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, fetchurl, dateutil, lxml }:
{ stdenv, buildPythonPackage, fetchPypi, dateutil, lxml }:
buildPythonPackage rec {
pname = "feedgen";

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@@ -1,5 +1,4 @@
{ lib, fetchFromGitHub, buildPythonPackage, python, flake8, six,
fetchurl }:
{ lib, fetchFromGitHub, buildPythonPackage, flake8, six }:
buildPythonPackage rec {
pname = "flake8-future-import";

View File

@@ -1,5 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, isPy3k, python, glibcLocales, flask, flask_sqlalchemy, flask_script, alembic
}:
{ stdenv, buildPythonPackage, fetchPypi, isPy3k, glibcLocales, flask, flask_sqlalchemy, flask_script, alembic }:
with stdenv.lib;

View File

@@ -1,7 +1,6 @@
{ lib
, buildPythonPackage
, fetchPypi
, fetchurl
, isPy3k
, docutils
, requests

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@@ -1,4 +1,4 @@
{ stdenv, lib, writeText, buildPythonPackage, fetchPypi }:
{ lib, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "fpdf";

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@@ -4,8 +4,6 @@
, html5lib
, wcwidth
, nose
, python
, isPy3k
}:
buildPythonPackage rec {

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@@ -5,9 +5,6 @@
, six
, scipy
, smart_open
, scikitlearn
, testfixtures
, unittest2
}:
buildPythonPackage rec {

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@@ -1,5 +1,5 @@
{ stdenv, fetchurl, python, cairomm, sparsehash, pycairo, autoreconfHook,
pkgconfig, boost, expat, scipy, numpy, cgal, gmp, mpfr, lndir,
pkgconfig, boost, expat, scipy, cgal, gmp, mpfr,
gobjectIntrospection, pygobject3, gtk3, matplotlib, ncurses,
buildPythonPackage }:

View File

@@ -1,10 +1,7 @@
{ fetchurl, python }:
assert python.pkgs.isPy27;
let utf =
if python.ucsEncoding == 2 then "16"
else if python.ucsEncoding == 4 then "32"
else throw "Unsupported python UCS encoding UCS${toString python.ucsEncoding}";
in python.pkgs.buildPythonPackage
python.pkgs.buildPythonPackage
{ pname = "gurobipy";
version = "7.5.2";
src = fetchurl

View File

@@ -1,4 +1,4 @@
{ stdenv, fetchPypi, fetchpatch, isPy27, python, buildPythonPackage
{ stdenv, fetchPypi, isPy27, python, buildPythonPackage
, numpy, hdf5, cython, six, pkgconfig, unittest2
, mpi4py ? null, openssh }:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, python
{ stdenv, buildPythonPackage, fetchPypi
, pytest, pytestcov, watchdog, mock
}:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi
{ buildPythonPackage, fetchPypi
, requests, six, dateutil }:
buildPythonPackage rec {

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@@ -1,6 +1,6 @@
{ lib, buildPythonPackage, fetchFromGitHub, python
{ lib, buildPythonPackage, fetchFromGitHub
, isPy3k, attrs, coverage, enum34
, doCheck ? true, pytest, pytest_xdist, flake8, flaky, mock
, doCheck ? true, pytest, pytest_xdist, flaky, mock
}:
buildPythonPackage rec {
# http://hypothesis.readthedocs.org/en/latest/packaging.html

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@@ -0,0 +1,34 @@
{ stdenv, buildPythonPackage, fetchFromGitHub, pytestrunner, scikitimage }:
buildPythonPackage {
pname = "image-match";
version = "1.1.2";
src = fetchFromGitHub {
owner = "ascribe";
repo = "image-match";
rev = "1c5f3170555540bdf43ff8b8189c4e8c13a8b950";
sha256 = "0vlmpidmhkpgdzw2k03x5layhijcrjpmyfd93yv2ls77ihz00ix5";
};
buildInputs = [ pytestrunner ];
propagatedBuildInputs = [
scikitimage
];
# remove elasticsearch requirement due to version incompatibility
postPatch = ''
substituteInPlace setup.py --replace "'elasticsearch>=5.0.0,<6.0.0'," ""
'';
# tests cannot work without elasticsearch
doCheck = false;
meta = with stdenv.lib; {
homepage = https://github.com/ascribe/image-match;
description = "Quickly search over billions of images";
license = licenses.asl20;
maintainers = with maintainers; [ cmcdragonkai ];
};
}

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi }:
{ buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "iowait";

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@@ -2,7 +2,6 @@
, stdenv
, buildPythonPackage
, fetchPypi
, pythonOlder
# Build dependencies
, glibcLocales
# Test dependencies
@@ -13,7 +12,6 @@
, mock
# Runtime dependencies
, backports_shutil_get_terminal_size
, jedi
, decorator
, pathlib2
, pickleshare

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@@ -1,11 +1,8 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, sphinx
, numpydoc
, isPy3k
, stdenv
, pytest
}:

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@@ -1,4 +1,4 @@
{ stdenv, lib, buildPythonPackage, fetchPypi }:
{ lib, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "jsmin";

View File

@@ -1,5 +1,4 @@
{ lib
, python
, buildPythonPackage
, fetchPypi
, ipython

View File

@@ -1,5 +1,4 @@
{ lib
, python
, buildPythonPackage
, fetchPypi
, fetchzip
@@ -13,7 +12,6 @@
, traitlets
, requests
, pythonOlder
, nodejs-8_x
, nodePackages
}:

View File

@@ -1,4 +1,4 @@
{ stdenv, kaitaistruct, buildPythonPackage, fetchPypi }:
{ stdenv, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "kaitaistruct";

View File

@@ -1,4 +1,4 @@
{ stdenv, lib, buildPythonPackage, fetchPypi
{ stdenv, buildPythonPackage, fetchPypi
, pytest, pytestcov, pytestpep8, pytest_xdist
, six, numpy, scipy, pyyaml, h5py
}:

View File

@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, fetchPypi
{ buildPythonPackage, fetchPypi
, pyasn1, pyasn1-modules, pytest
, openldap, cyrus_sasl }:

View File

@@ -1,4 +1,4 @@
{ lib, buildPythonPackage, fetchPypi, isPy3k
{ lib, buildPythonPackage, fetchPypi
, pbr, ldap, fixtures, testresources, testtools }:
buildPythonPackage rec {

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@@ -1,5 +1,5 @@
{ stdenv, lib, buildPythonPackage, fetchFromGitHub
, python, cmake, sip, protobuf, pythonOlder }:
{ stdenv, buildPythonPackage, fetchFromGitHub
, cmake, sip, protobuf, pythonOlder }:
buildPythonPackage rec {
pname = "libarcus";

View File

@@ -8,7 +8,6 @@
, six
, nose
, Mako
, python
, cudaSupport ? false, cudatoolkit , nvidia_x11
, openclSupport ? true, ocl-icd, clblas
}:

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, python, pkgconfig, libversion, pythonOlder }:
{ stdenv, buildPythonPackage, fetchPypi, pkgconfig, libversion, pythonOlder }:
buildPythonPackage rec {
pname = "libversion";

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@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchgit, python, pkgconfig, lxml, libvirt, nose }:
{ stdenv, buildPythonPackage, fetchgit, pkgconfig, lxml, libvirt, nose }:
buildPythonPackage rec {
pname = "libvirt";

View File

@@ -1,7 +1,6 @@
{ stdenv,
buildPythonPackage,
fetchFromGitHub,
isPy3k,
pythonOlder,
lib,
requests,

View File

@@ -1,4 +1,4 @@
{ stdenv, buildPythonPackage, fetchPypi, fetchFromGitHub }:
{ stdenv, buildPythonPackage, fetchPypi }:
buildPythonPackage rec {
pname = "lmtpd";

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, isPy3k

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, isPy3k

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, isPy3k

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, mozfile

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, moznetwork

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
}:

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, moznetwork

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, isPy3k

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, mozlog

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, mozinfo

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@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, mozlog

View File

@@ -1,5 +1,4 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, mozdevice

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