Merge staging-next into staging

2021-03-06 12:20:21 +00:00 · 2021-03-06 12:20:21 +00:00 · 91f883b8d3
parent fb5c8b556d 88ce41bb79
commit 91f883b8d3
13 changed files with 191 additions and 61 deletions
--- a/nixos/doc/manual/release-notes/rl-2105.xml
+++ b/nixos/doc/manual/release-notes/rl-2105.xml
@ -754,6 +754,40 @@ self: super:
     once during the time when the timer was inactive.
    </para>
   </listitem>
+   <listitem>
+    <para>
+     The <literal>rustPlatform.buildRustPackage</literal> function is split into several hooks:
+     <package>cargoSetupHook</package> to set up vendoring for Cargo-based projects,
+     <package>cargoBuildHook</package> to build a project using Cargo,
+     <package>cargoInstallHook</package> to install a project using Cargo, and
+     <package>cargoCheckHook</package> to run tests in Cargo-based projects. With this change,
+     mixed-language projects can use the relevant hooks within builders other than
+     <literal>buildRustPackage</literal>. However, these changes also required several API changes to
+     <literal>buildRustPackage</literal> itself:
+
+     <itemizedlist>
+      <listitem>
+       <para>
+        The <literal>target</literal> argument was removed. Instead, <literal>buildRustPackage</literal>
+        will always use the same target as the C/C++ compiler that is used.
+       </para>
+      </listitem>
+      <listitem>
+       <para>
+        The <literal>cargoParallelTestThreads</literal> argument was removed. Parallel tests are
+        now disabled through <literal>dontUseCargoParallelTests</literal>.
+       </para>
+      </listitem>
+     </itemizedlist>
+    </para>
+   </listitem>
+   <listitem>
+    <para>
+     The <literal>rustPlatform.maturinBuildHook</literal> hook was added. This hook can be used
+     with <literal>buildPythonPackage</literal> to build Python packages that are written in Rust
+     and use Maturin as their build tool.
+    </para>
+   </listitem>
  </itemizedlist>
 </section>
 </section>
--- a/nixos/lib/qemu-flags.nix
+++ b/nixos/lib/qemu-flags.nix
@ -18,13 +18,15 @@ rec {
    ];

  qemuSerialDevice = if pkgs.stdenv.isi686 || pkgs.stdenv.isx86_64 then "ttyS0"
-        else if pkgs.stdenv.isAarch32 || pkgs.stdenv.isAarch64 then "ttyAMA0"
+        else if (with pkgs.stdenv.hostPlatform; isAarch32 || isAarch64 || isPower) then "ttyAMA0"
        else throw "Unknown QEMU serial device for system '${pkgs.stdenv.hostPlatform.system}'";

  qemuBinary = qemuPkg: {
    x86_64-linux = "${qemuPkg}/bin/qemu-kvm -cpu max";
    armv7l-linux = "${qemuPkg}/bin/qemu-system-arm -enable-kvm -machine virt -cpu host";
    aarch64-linux = "${qemuPkg}/bin/qemu-system-aarch64 -enable-kvm -machine virt,gic-version=host -cpu host";
+    powerpc64le-linux = "${qemuPkg}/bin/qemu-system-ppc64 -machine powernv";
+    powerpc64-linux = "${qemuPkg}/bin/qemu-system-ppc64 -machine powernv";
    x86_64-darwin = "${qemuPkg}/bin/qemu-kvm -cpu max";
  }.${pkgs.stdenv.hostPlatform.system} or "${qemuPkg}/bin/qemu-kvm";
 }
--- a/pkgs/applications/networking/instant-messengers/deltachat-electron/default.nix
+++ b/pkgs/applications/networking/instant-messengers/deltachat-electron/default.nix
@ -2,13 +2,13 @@

 let
  pname = "deltachat-electron";
-  version = "1.15.1";
+  version = "1.15.2";
  name = "${pname}-${version}";

  src = fetchurl {
    url =
      "https://download.delta.chat/desktop/v${version}/DeltaChat-${version}.AppImage";
-    sha256 = "sha256-lItI1aIFHYQ3wGRVn4Yw0nA7qgfhyHT/43kKbY/1cgI=";
+    sha256 = "sha256-iw2tU8qqXWbtEdLGlW8HNBHx8F2CgnCGCBUWpM407us=";
  };

  appimageContents = appimageTools.extract { inherit name src; };
--- a/pkgs/development/libraries/aws-c-common/default.nix
+++ b/pkgs/development/libraries/aws-c-common/default.nix
@ -2,13 +2,13 @@

 stdenv.mkDerivation rec {
  pname = "aws-c-common";
-  version = "0.4.64";
+  version = "0.5.2";

  src = fetchFromGitHub {
    owner = "awslabs";
    repo = pname;
    rev = "v${version}";
-    sha256 = "sha256-izEZMOPHj/9EL78b/t3M0Tki6eA8eRrpG7DO2tkpf1A=";
+    sha256 = "0rd2qzaa9mmn5f6f2bl1wgv54f17pqx3vwyy9f8ylh59qfnilpmg";
  };

  patches = [
@ -23,18 +23,19 @@ stdenv.mkDerivation rec {

  cmakeFlags = [
    "-DBUILD_SHARED_LIBS=ON"
+    "-DCMAKE_SKIP_BUILD_RPATH=OFF" # for tests
  ];

  NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin
    "-Wno-nullability-extension -Wno-typedef-redefinition";

+  doCheck = true;
+
  meta = with lib; {
    description = "AWS SDK for C common core";
    homepage = "https://github.com/awslabs/aws-c-common";
    license = licenses.asl20;
    platforms = platforms.unix;
-    maintainers = with maintainers; [ orivej eelco ];
-    # https://github.com/awslabs/aws-c-common/issues/754
-    broken = stdenv.hostPlatform.isMusl;
+    maintainers = with maintainers; [ orivej eelco r-burns ];
  };
 }
--- a/pkgs/development/libraries/aws-c-io/default.nix
+++ b/pkgs/development/libraries/aws-c-io/default.nix
@ -2,13 +2,13 @@

 stdenv.mkDerivation rec {
  pname = "aws-c-io";
-  version = "0.7.1";
+  version = "0.9.1";

  src = fetchFromGitHub {
    owner = "awslabs";
    repo = pname;
    rev = "v${version}";
-    sha256 = "sha256-dDvq5clOUaPR7lOCJ/1g0lrCzVOmzwCnqHrBZfBewO4=";
+    sha256 = "0lx72p9xmmnjkz4zkfb1lz0ibw0jsy52qpydhvn56bq85nv44rwx";
  };

  nativeBuildInputs = [ cmake ];
--- a/pkgs/development/python-modules/diskcache/default.nix
+++ b/pkgs/development/python-modules/diskcache/default.nix
@ -7,18 +7,17 @@
 , pytest_xdist
 , pytest-django
 , mock
-, django
 }:

 buildPythonPackage rec {
  pname = "diskcache";
-  version = "5.1.0";
+  version = "5.2.1";

  src = fetchFromGitHub {
    owner = "grantjenks";
    repo = "python-diskcache";
    rev = "v${version}";
-    sha256 = "0xwqw60dbn1x2294galcs08vm6ydcr677lr8slqz8a3ry6sgkhn9";
+    sha256 = "sha256-dWtEyyWpg0rxEwyhBdPyApzgS9o60HVGbtY76ELHvX8=";
  };

  checkInputs = [
@ -31,6 +30,7 @@ buildPythonPackage rec {

  # Darwin sandbox causes most tests to fail.
  doCheck = !stdenv.isDarwin;
+  pythonImportsCheck = [ "diskcache" ];

  meta = with lib; {
    description = "Disk and file backed persistent cache";
--- a/pkgs/development/python-modules/pandas/default.nix
+++ b/pkgs/development/python-modules/pandas/default.nix
@ -1,4 +1,5 @@
-{ lib, stdenv
+{ lib
+, stdenv
 , buildPythonPackage
 , fetchPypi
 , python
@ -8,37 +9,41 @@
 , cython
 , dateutil
 , html5lib
+, jinja2
 , lxml
 , numexpr
 , openpyxl
 , pytz
-, sqlalchemy
 , scipy
+, sqlalchemy
 , tables
 , xlrd
 , xlwt
-# Test Inputs
+# Test inputs
 , glibcLocales
 , hypothesis
 , pytestCheckHook
+, pytest-xdist
+, pytest-asyncio
+, XlsxWriter
 # Darwin inputs
 , runtimeShell
-, libcxx ? null
+, libcxx
 }:

 buildPythonPackage rec {
  pname = "pandas";
-  version = "1.2.2";
+  version = "1.2.3";

  src = fetchPypi {
    inherit pname version;
-    sha256 = "14ed84b463e9b84c8ff9308a79b04bf591ae3122a376ee0f62c68a1bd917a773";
+    sha256 = "078b4nncn6778ymmqn80j2q6n7fcs4d6bbaraar5nypgbaw10vyz";
  };
-  # See https://github.com/scipy/scipy/issues/13585 and https://github.com/pandas-dev/pandas/pull/40020
-  patches = [ ./fix-tests.patch ];

  nativeBuildInputs = [ cython ];
+
  buildInputs = lib.optional stdenv.isDarwin libcxx;
+
  propagatedBuildInputs = [
    beautifulsoup4
    bottleneck
@ -55,58 +60,57 @@ buildPythonPackage rec {
    xlwt
  ];

-  checkInputs = [ pytestCheckHook glibcLocales hypothesis ];
+  checkInputs = [
+    glibcLocales
+    hypothesis
+    jinja2
+    pytest-asyncio
+    pytest-xdist
+    pytestCheckHook
+    XlsxWriter
+  ];

-  # doesn't work with -Werror,-Wunused-command-line-argument
+  # Doesn't work with -Werror,-Wunused-command-line-argument
  # https://github.com/NixOS/nixpkgs/issues/39687
  hardeningDisable = lib.optional stdenv.cc.isClang "strictoverflow";

-  # Parallel Cythonization is broken in Python 3.8 on Darwin. Fixed in the next
-  # release. https://github.com/pandas-dev/pandas/pull/30862
-  setupPyBuildFlags = lib.optionals (!(isPy38 && stdenv.isDarwin)) [
-    # As suggested by
-    # https://pandas.pydata.org/pandas-docs/stable/development/contributing.html#creating-a-python-environment
-    "--parallel=$NIX_BUILD_CORES"
-  ];
+  # For OSX, we need to add a dependency on libcxx, which provides
+  # `complex.h` and other libraries that pandas depends on to build.
+  postPatch = lib.optionalString stdenv.isDarwin ''
+    cpp_sdk="${libcxx}/include/c++/v1";
+    echo "Adding $cpp_sdk to the setup.py common_include variable"
+    substituteInPlace setup.py \
+      --replace "['pandas/src/klib', 'pandas/src']" \
+                "['pandas/src/klib', 'pandas/src', '$cpp_sdk']"
+  '';

  doCheck = !stdenv.isAarch64; # upstream doesn't test this architecture

  pytestFlagsArray = [
    "--skip-slow"
    "--skip-network"
+    "--numprocesses" "0"
  ];
+
  disabledTests = [
-    # since dateutil 0.6.0 the following fails: test_fallback_plural, test_ambiguous_flags, test_ambiguous_compat
-    # was supposed to be solved by https://github.com/dateutil/dateutil/issues/321, but is not the case
-    "test_fallback_plural"
-    "test_ambiguous_flags"
-    "test_ambiguous_compat"
    # Locale-related
    "test_names"
    "test_dt_accessor_datetime_name_accessors"
    "test_datetime_name_accessors"
-    # Can't import from test folder
-    "test_oo_optimizable"
    # Disable IO related tests because IO data is no longer distributed
    "io"
-    # KeyError Timestamp
-    "test_to_excel"
-    # ordering logic has changed
-    "numpy_ufuncs_other"
-    "order_without_freq"
-    # tries to import from pandas.tests post install
+    # Tries to import from pandas.tests post install
    "util_in_top_level"
-    # Fails with 1.0.5
-    "test_constructor_list_frames"
-    "test_constructor_with_embedded_frames"
-    # tries to import compiled C extension locally
+    # Tries to import compiled C extension locally
    "test_missing_required_dependency"
+    # AssertionError with 1.2.3
+    "test_from_coo"
  ] ++ lib.optionals stdenv.isDarwin [
    "test_locale"
    "test_clipboard"
  ];

-  # tests have relative paths, and need to reference compiled C extensions
+  # Tests have relative paths, and need to reference compiled C extensions
  # so change directory where `import .test` is able to be resolved
  preCheck = ''
    cd $out/${python.sitePackages}/pandas
@ -123,6 +127,8 @@ buildPythonPackage rec {
    export PATH=$(pwd):$PATH
  '';

+  pythonImportsCheck = [ "pandas" ];
+
  meta = with lib; {
    # https://github.com/pandas-dev/pandas/issues/14866
    # pandas devs are no longer testing i686 so safer to assume it's broken
--- a/pkgs/development/python-modules/pandas/fix-tests.patch
+++ b/pkgs/development/python-modules/pandas/fix-tests.patch
@ -1,12 +0,0 @@
-diff --color -ur a/pandas/tests/arrays/sparse/test_array.py b/pandas/tests/arrays/sparse/test_array.py
--- a/pandas/tests/arrays/sparse/test_array.py	2020-12-07 12:42:08.000000000 +0100
-+++ b/pandas/tests/arrays/sparse/test_array.py	2021-02-27 21:48:16.483903149 +0100
-@@ -1188,7 +1188,7 @@
-         row = [0, 3, 1, 0]
-         col = [0, 3, 1, 2]
-         data = [4, 5, 7, 9]
-        sp_array = scipy.sparse.coo_matrix((data, (row, col)))
-+        sp_array = scipy.sparse.coo_matrix((data, (row, col)), dtype="int")
-         result = pd.Series.sparse.from_coo(sp_array)
- 
-         index = pd.MultiIndex.from_arrays([[0, 0, 1, 3], [0, 2, 1, 3]])
--- a/pkgs/tools/misc/gtklp/default.nix
+++ b/pkgs/tools/misc/gtklp/default.nix
@ -0,0 +1,52 @@
+{ stdenv, lib, fetchurl
+, autoreconfHook, libtool, pkg-config
+, gtk2, glib, cups, gettext, openssl
+}:
+
+stdenv.mkDerivation rec {
+  pname = "gtklp";
+  version = "1.3.4";
+
+  src = fetchurl {
+    url = "mirror://sourceforge/${pname}/${pname}-${version}.src.tar.gz";
+    sha256 = "1arvnnvar22ipgnzqqq8xh0kkwyf71q2sfsf0crajpsr8a8601xy";
+  };
+
+  nativeBuildInputs = [
+    pkg-config
+    autoreconfHook
+  ];
+
+  buildInputs = [
+    cups
+    gettext
+    glib
+    gtk2
+    libtool
+    openssl
+  ];
+
+  patches = [
+    ./patches/mdv-fix-str-fmt.patch
+    ./patches/autoconf.patch
+  ];
+
+  preConfigure = ''
+    substituteInPlace include/defaults.h --replace "netscape" "firefox"
+    substituteInPlace include/defaults.h --replace "http://localhost:631/sum.html#STANDARD_OPTIONS" \
+                                                   "http://localhost:631/help/"
+  '';
+
+  preInstall = ''
+    install -D -m0644 -t $out/share/doc AUTHORS BUGS ChangeLog README USAGE
+  '';
+
+  meta = with lib; {
+    description = "A graphical frontend for CUPS";
+    homepage = "https://gtklp.sirtobi.com";
+    license = licenses.gpl2Only;
+    maintainers = with maintainers; [ caadar ];
+    platforms = platforms.unix;
+  };
+
+}
--- a/pkgs/tools/misc/gtklp/patches/autoconf.patch
+++ b/pkgs/tools/misc/gtklp/patches/autoconf.patch
@ -0,0 +1,23 @@
+Patch origin: http://sophie.zarb.org/rpms/68e90a72e0052022f558148d97c9ea2a/files/3
+
+diff --git a/configure.ac b/configure.ac
+index b7a30e9..3768ae9 100644
+--- a/configure.ac
+++ b/configure.ac
+@@ -8,6 +8,7 @@ AC_CONFIG_HEADERS([config.h])
+ 
+ AC_CONFIG_MACRO_DIR([m4])
+ AM_GNU_GETTEXT([external])
+AM_GNU_GETTEXT_REQUIRE_VERSION([0.21])
+ 
+ dnl Extra params
+ CUPSCONFIGPATH=""
+@@ -30,8 +31,6 @@ AC_SUBST(XLIBS)
+ 
+ dnl Checks for header files
+ 
+-dnl internationalization macros
+-AM_GNU_GETTEXT
+ 
+ 
+ # Forte Compiler ############################################################
--- a/pkgs/tools/misc/gtklp/patches/mdv-fix-str-fmt.patch
+++ b/pkgs/tools/misc/gtklp/patches/mdv-fix-str-fmt.patch
@ -0,0 +1,22 @@
+Patch source: http://sophie.zarb.org/rpms/68e90a72e0052022f558148d97c9ea2a/files/1
+
+--- a/libgtklp/libgtklp.c	2020-08-25 17:31:52.427298559 +0100
+++ b/libgtklp/libgtklp.c	2020-08-25 17:36:37.728154682 +0100
+@@ -939,7 +939,7 @@
+ 		gtk_widget_show(pixmapwid);
+ 
+ 		if (strlen(gerror2) == 0)
+-			snprintf(tmplabel, (size_t) MAXLINE, gerror1);
+			snprintf(tmplabel, (size_t) MAXLINE, "%s", gerror1);
+ 		else
+ 			snprintf(tmplabel, (size_t) MAXLINE, gerror1, gerror2);
+ 		label = gtk_label_new(tmplabel);
+@@ -973,7 +973,7 @@
+ #endif
+ 	} else {
+ 		if (strlen(gerror2) == 0)
+-			g_warning(gerror1);
+			g_warning("%s", gerror1);
+ 		else
+ 			g_warning(gerror1, gerror2);
+ 	}
--- a/pkgs/tools/package-management/nix/default.nix
+++ b/pkgs/tools/package-management/nix/default.nix
@ -22,7 +22,7 @@ common =
  , stateDir
  , confDir
  , withLibseccomp ? lib.any (lib.meta.platformMatch stdenv.hostPlatform) libseccomp.meta.platforms, libseccomp
-  , withAWS ? !enableStatic && !stdenv.hostPlatform.isMusl && (stdenv.isLinux || stdenv.isDarwin), aws-sdk-cpp
+  , withAWS ? !enableStatic && (stdenv.isLinux || stdenv.isDarwin), aws-sdk-cpp
  , enableStatic ? stdenv.hostPlatform.isStatic
  , name, suffix ? "", src
  , patches ? [ ]
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@ -1362,6 +1362,8 @@ in

  glyr = callPackage ../tools/audio/glyr { };

+  gtklp = callPackage ../tools/misc/gtklp { };
+
  google-amber = callPackage ../tools/graphics/amber { };

  hakrawler = callPackage ../tools/security/hakrawler { };