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python3Packages.nipype: 1.3.1 -> 1.4.2, enable python3.8

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This commit is contained in:
Jonathan Ringer 2020-05-04 21:36:05 -07:00 committed by Jon
parent 24d2e3169a
commit 83f5fd8958
1 changed files with 9 additions and 5 deletions
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14
pkgs/development/python-modules/nipype/default.nix
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@ -31,6 +31,7 @@
, xvfbwrapper , xvfbwrapper
, pytestcov , pytestcov
, codecov , codecov
, sphinx
# other dependencies # other dependencies
, which , which
, bash , bash
@ -49,11 +50,11 @@ in
buildPythonPackage rec { buildPythonPackage rec {
pname = "nipype"; pname = "nipype";
version = "1.3.1"; version = "1.4.2";
src = fetchPypi { src = fetchPypi {
inherit pname version; inherit pname version;
sha256 = "bb190964b568d64b04b73d2aa7eae31061fdbc3051d8c27bb34b1632db07ec71"; sha256 = "1nr0z0k4xx1vswkp03g1lf8141mr4j2fbwd7wmpay4vz46qcp786";
}; };
postPatch = '' postPatch = ''
@ -61,6 +62,10 @@ buildPythonPackage rec {
--replace "/usr/bin/env bash" "${bash}/bin/bash" --replace "/usr/bin/env bash" "${bash}/bin/bash"
''; '';
nativeBuildInputs = [
sphinx
];
propagatedBuildInputs = [ propagatedBuildInputs = [
click click
dateutil dateutil
@ -102,15 +107,14 @@ buildPythonPackage rec {
doCheck = !stdenv.isDarwin; doCheck = !stdenv.isDarwin;
# ignore tests which incorrect fail to detect xvfb # ignore tests which incorrect fail to detect xvfb
checkPhase = '' checkPhase = ''
LC_ALL="en_US.UTF-8" pytest -v nipype -k 'not display' LC_ALL="en_US.UTF-8" pytest nipype/tests -k 'not display'
''; '';
pythonImportsCheck = [ "nipype" ];
meta = with stdenv.lib; { meta = with stdenv.lib; {
homepage = "https://nipy.org/nipype/"; homepage = "https://nipy.org/nipype/";
description = "Neuroimaging in Python: Pipelines and Interfaces"; description = "Neuroimaging in Python: Pipelines and Interfaces";
license = licenses.bsd3; license = licenses.bsd3;
maintainers = with maintainers; [ ashgillman ]; maintainers = with maintainers; [ ashgillman ];
# tests hang, blocking reviews of other packages
broken = isPy38;
}; };
} }