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pythonPackages.hdbscan: fix build by removing upstream patch, adding joblib 

joblib is for the benefit of py27, whose scikitlearn doesn't include it.
also move cython to nativeBuildInputs
This commit is contained in:
Robert Scott 2019-06-22 16:11:06 +01:00
parent 4d9a4aa3f1
commit 8008954579
1 changed files with 3 additions and 11 deletions
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14
pkgs/development/python-modules/hdbscan/default.nix
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@ -6,7 +6,7 @@
, scipy , scipy
, scikitlearn , scikitlearn
, fetchPypi , fetchPypi
, fetchpatch , joblib
}: }:
buildPythonPackage rec { buildPythonPackage rec {
@ -18,18 +18,10 @@ buildPythonPackage rec {
sha256 = "5cfdc25375123eb9a72363449979141cc928c1953f220f0f81d7baabcaccec2d"; sha256 = "5cfdc25375123eb9a72363449979141cc928c1953f220f0f81d7baabcaccec2d";
}; };
patches = [
# Fix Tests. Drop in release >0.8.20
(fetchpatch {
name = "test-rsl-missing-import.patch";
url = https://github.com/scikit-learn-contrib/hdbscan/commit/e40ccef139e56e38adf7bd6912cd63efd97598f9.patch;
sha256 = "0cfq4ja7j61h2zwd1jw5gagcz2sg18kjnx29sb0bwa13wfw6fip0";
})
];
checkInputs = [ nose ]; checkInputs = [ nose ];
propagatedBuildInputs = [ cython numpy scipy scikitlearn ]; nativeBuildInputs = [ cython ];
propagatedBuildInputs = [ numpy scipy scikitlearn joblib ];
meta = with lib; { meta = with lib; {
description = "Hierarchical Density-Based Spatial Clustering of Applications with Noise, a clustering algorithm with a scikit-learn compatible API"; description = "Hierarchical Density-Based Spatial Clustering of Applications with Noise, a clustering algorithm with a scikit-learn compatible API";