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pymol: 1.8.4 -> 2.1.0

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Katona László 2018-03-26 13:01:25 +02:00 committed by Muoniurn
parent 3a8b8bcb69
commit 75d8c81868
1 changed files with 6 additions and 6 deletions
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12
pkgs/applications/science/chemistry/pymol/default.nix
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@ -1,14 +1,14 @@
{ stdenv, fetchurl, makeDesktopItem { stdenv, fetchurl, makeDesktopItem
, python3, python3Packages , python3, python3Packages
, glew, freeglut, libpng, libxml2, tk, freetype }: , glew, freeglut, libpng, libxml2, tk, freetype, libmsgpack }:
with stdenv.lib; with stdenv.lib;
let let
pname = "pymol"; pname = "pymol";
ver_maj = "1.8"; ver_maj = "2";
ver_min = "4"; ver_min = "1";
version = "${ver_maj}.${ver_min}.0"; version = "${ver_maj}.${ver_min}.0";
description = "A Python-enhanced molecular graphics tool"; description = "A Python-enhanced molecular graphics tool";
@ -16,7 +16,7 @@ let
name = "${pname}"; name = "${pname}";
exec = "${pname}"; exec = "${pname}";
desktopName = "PyMol Molecular Graphics System"; desktopName = "PyMol Molecular Graphics System";
genericName = "Molecular Modeller"; genericName = "Molecular Modeler";
comment = description; comment = description;
mimeType = "chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;"; mimeType = "chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;";
categories = "Graphics;Education;Science;Chemistry;"; categories = "Graphics;Education;Science;Chemistry;";
@ -26,10 +26,10 @@ python3Packages.buildPythonApplication {
name = "pymol-${version}"; name = "pymol-${version}";
src = fetchurl { src = fetchurl {
url = "mirror://sourceforge/project/pymol/pymol/${ver_maj}/pymol-v${version}.tar.bz2"; url = "mirror://sourceforge/project/pymol/pymol/${ver_maj}/pymol-v${version}.tar.bz2";
sha256 = "0yfj8g5yic9zz6f0bw2n8h6ifvgsn8qvhq84alixsi28wzppn55n"; sha256 = "1qpacd5w4r9a0nm5iqmkd92ym3ai00dp7v61cwd6jgakk6wfps3s";
}; };
buildInputs = [ python3Packages.numpy glew freeglut libpng libxml2 tk freetype ]; buildInputs = [ python3Packages.numpy glew freeglut libpng libxml2 tk freetype libmsgpack ];
NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2"; NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2";
installPhase = '' installPhase = ''