diff --git a/pkgs/development/tools/poetry2nix/poetry2nix/default.nix b/pkgs/development/tools/poetry2nix/poetry2nix/default.nix index 3b622c20559..62063ff0994 100644 --- a/pkgs/development/tools/poetry2nix/poetry2nix/default.nix +++ b/pkgs/development/tools/poetry2nix/poetry2nix/default.nix @@ -5,7 +5,7 @@ }: let # Poetry2nix version - version = "1.16.0"; + version = "1.16.1"; inherit (poetryLib) isCompatible readTOML moduleName; diff --git a/pkgs/development/tools/poetry2nix/poetry2nix/overrides.nix b/pkgs/development/tools/poetry2nix/poetry2nix/overrides.nix index 2106708a28f..88783e4f380 100644 --- a/pkgs/development/tools/poetry2nix/poetry2nix/overrides.nix +++ b/pkgs/development/tools/poetry2nix/poetry2nix/overrides.nix @@ -250,6 +250,15 @@ self: super: } ); + fiona = super.fiona.overridePythonAttrs ( + old: { + buildInputs = (old.buildInputs or [ ]) ++ [ pkgs.gdal_2 ]; + nativeBuildInputs = [ + pkgs.gdal_2 # for gdal-config + ]; + } + ); + gdal = super.gdal.overridePythonAttrs ( old: { preBuild = (old.preBuild or "") + '' @@ -266,6 +275,23 @@ self: super: } ); + grpcio = super.grpcio.overridePythonAttrs (old: { + nativeBuildInputs = (old.nativeBuildInputs or [ ]) ++ [ self.cython pkgs.pkg-config ]; + buildInputs = (old.buildInputs or [ ]) ++ [ pkgs.c-ares pkgs.openssl pkgs.zlib ]; + + outputs = [ "out" "dev" ]; + + GRPC_BUILD_WITH_BORING_SSL_ASM = ""; + GRPC_PYTHON_BUILD_SYSTEM_OPENSSL = 1; + GRPC_PYTHON_BUILD_SYSTEM_ZLIB = 1; + GRPC_PYTHON_BUILD_SYSTEM_CARES = 1; + DISABLE_LIBC_COMPATIBILITY = 1; + }); + + grpcio-tools = super.grpcio-tools.overridePythonAttrs (old: { + outputs = [ "out" "dev" ]; + }); + h3 = super.h3.overridePythonAttrs ( old: { preBuild = (old.preBuild or "") + '' @@ -277,14 +303,34 @@ self: super: h5py = super.h5py.overridePythonAttrs ( old: - if old.format != "wheel" then rec { - nativeBuildInputs = (old.nativeBuildInputs or [ ]) ++ [ pkgs.pkg-config ]; - buildInputs = (old.buildInputs or [ ]) ++ [ pkgs.hdf5 self.pkgconfig self.cython ]; - configure_flags = "--hdf5=${pkgs.hdf5}"; - postConfigure = '' - ${self.python.executable} setup.py configure ${configure_flags} - ''; - } else old + if old.format != "wheel" then + ( + let + mpi = pkgs.hdf5.mpi; + mpiSupport = pkgs.hdf5.mpiSupport; + in + { + nativeBuildInputs = (old.nativeBuildInputs or [ ]) ++ [ pkgs.pkg-config ]; + buildInputs = + (old.buildInputs or [ ]) + ++ [ pkgs.hdf5 self.pkgconfig self.cython ] + ++ lib.optional mpiSupport mpi + ; + propagatedBuildInputs = + old.propagatedBuildInputs + ++ lib.optionals mpiSupport [ self.mpi4py self.openssh ] + ; + preBuild = if mpiSupport then "export CC=${mpi}/bin/mpicc" else ""; + HDF5_DIR = "${pkgs.hdf5}"; + HDF5_MPI = if mpiSupport then "ON" else "OFF"; + # avoid strict pinning of numpy + postPatch = '' + substituteInPlace setup.py \ + --replace "numpy ==" "numpy >=" + ''; + pythonImportsCheck = [ "h5py" ]; + } + ) else old ); horovod = super.horovod.overridePythonAttrs ( @@ -618,6 +664,12 @@ self: super: } ); + munch = super.munch.overridePythonAttrs ( + old: { + buildInputs = (old.buildInputs or [ ]) ++ [ self.pbr ]; + } + ); + mysqlclient = super.mysqlclient.overridePythonAttrs ( old: { buildInputs = (old.buildInputs or [ ]) ++ [ pkgs.libmysqlclient ]; @@ -939,6 +991,13 @@ self: super: } ); + pygeos = super.pygeos.overridePythonAttrs ( + old: { + buildInputs = (old.buildInputs or [ ]) ++ [ pkgs.geos ]; + nativeBuildInputs = (old.nativeBuildInputs or [ ]) ++ [ pkgs.geos ]; + } + ); + pygobject = super.pygobject.overridePythonAttrs ( old: { nativeBuildInputs = (old.nativeBuildInputs or [ ]) ++ [ pkgs.pkg-config ]; @@ -1226,6 +1285,15 @@ self: super: propagatedBuildInputs = (old.propagatedBuildInputs or [ ]) ++ [ self.setuptools ]; }); + rtree = super.rtree.overridePythonAttrs (old: { + propagatedNativeBuildInputs = (old.propagatedNativeBuildInputs or [ ]) ++ [ pkgs.libspatialindex ]; + postPatch = '' + substituteInPlace rtree/finder.py --replace \ + "find_library('spatialindex_c')" \ + "'${pkgs.libspatialindex}/lib/libspatialindex_c${pkgs.stdenv.hostPlatform.extensions.sharedLibrary}'" + ''; + }); + scipy = super.scipy.overridePythonAttrs ( old: if old.format != "wheel" then {