pythonPackages: new functions to build numpy and scipy

This commit is contained in:
Frederik Rietdijk
2016-02-04 21:30:39 +01:00
parent e5b143a964
commit 63cf61e8d3
4 changed files with 117 additions and 110 deletions

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@@ -1,35 +0,0 @@
{
# Python package expression
python,
# Name of package (e.g. numpy or scipy)
pkgName,
# OpenBLAS math library
openblas
}:
{
# Re-export openblas here so that it can be sure that the same one will be used
# in the propagatedBuildInputs.
inherit openblas;
# First "install" the package, then import what was installed, and call the
# .test() function, which will run the test suite.
checkPhase = ''
runHook preCheck
pushd dist
${python.interpreter} -c 'import ${pkgName}; ${pkgName}.test("fast", verbose=10)'
popd
runHook postCheck
'';
# Creates a site.cfg telling the setup script where to find depended-on
# math libraries.
preBuild = ''
echo "Creating site.cfg file..."
cat << EOF > site.cfg
[openblas]
include_dirs = ${openblas}/include
library_dirs = ${openblas}/lib
EOF
'';
}

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@@ -0,0 +1,51 @@
{lib, python, buildPythonPackage, isPyPy, gfortran, nose, blas}:
args:
let
inherit (args) version;
in buildPythonPackage (args // rec {
name = "numpy-${version}";
disabled = isPyPy;
buildInputs = args.buildInputs or [ gfortran nose ];
propagatedBuildInputs = args.propagatedBuildInputs or [ passthru.blas ];
preConfigure = ''
sed -i 's/-faltivec//' numpy/distutils/system_info.py
'';
preBuild = ''
echo "Creating site.cfg file..."
cat << EOF > site.cfg
[openblas]
include_dirs = ${passthru.blas}/include
library_dirs = ${passthru.blas}/lib
EOF
'';
checkPhase = ''
runHook preCheck
pushd dist
${python.interpreter} -c 'import numpy; numpy.test("fast", verbose=10)'
popd
runHook postCheck
'';
passthru = {
blas = blas;
};
# The large file support test is disabled because it takes forever
# and can cause the machine to run out of disk space when run.
prePatch = ''
sed -i 's/test_large_file_support/donttest/' numpy/lib/tests/test_format.py
'';
meta = {
description = "Scientific tools for Python";
homepage = "http://numpy.scipy.org/";
maintainers = with lib.maintainers; [ fridh ];
} // (args.meta or {});
})

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@@ -0,0 +1,47 @@
{lib, python, buildPythonPackage, isPyPy, gfortran, nose}:
args:
let
inherit (args) version;
inherit (args) numpy;
in buildPythonPackage (args // rec {
name = "scipy-${version}";
buildInputs = (args.buildInputs or [ gfortran nose ]);
propagatedBuildInputs = (args.propagatedBuildInputs or [ passthru.blas numpy]);
preConfigure = ''
sed -i '0,/from numpy.distutils.core/s//import setuptools;from numpy.distutils.core/' setup.py
'';
preBuild = ''
echo "Creating site.cfg file..."
cat << EOF > site.cfg
[openblas]
include_dirs = ${passthru.blas}/include
library_dirs = ${passthru.blas}/lib
EOF
'';
checkPhase = ''
runHook preCheck
pushd dist
${python.interpreter} -c 'import scipy; scipy.test("fast", verbose=10)'
popd
runHook postCheck
'';
passthru = {
blas = numpy.blas;
};
setupPyBuildFlags = [ "--fcompiler='gnu95'" ];
meta = {
description = "SciPy (pronounced 'Sigh Pie') is open-source software for mathematics, science, and engineering. ";
homepage = http://www.scipy.org/;
maintainers = with lib.maintainers; [ fridh ];
} // (args.meta or {});
})