From 598f11862cc6671911244c1f4d8e07cecb81fe1e Mon Sep 17 00:00:00 2001
From: Bruno Bzeznik <Bruno.Bzeznik@imag.fr>
Date: Thu, 28 Feb 2019 15:00:37 +0100
Subject: [PATCH] messer-slim: init at 3.2.1

---
 .../science/biology/messer-slim/default.nix   | 27 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 29 insertions(+)
 create mode 100644 pkgs/applications/science/biology/messer-slim/default.nix

diff --git a/pkgs/applications/science/biology/messer-slim/default.nix b/pkgs/applications/science/biology/messer-slim/default.nix
new file mode 100644
index 00000000000..dbbf8d39a93
--- /dev/null
+++ b/pkgs/applications/science/biology/messer-slim/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchurl, cmake, gcc, gcc-unwrapped }:
+
+stdenv.mkDerivation rec {
+  version = "3.2.1"; 
+  name = "messer-slim-${version}";
+
+  src = fetchurl {
+    url = "https://github.com/MesserLab/SLiM/archive/v${version}.tar.gz";
+    sha256 = "1j3ssjvxpsc21mmzj59kwimglz8pdazi5w6wplmx11x744k77wa1";
+  };
+
+  enableParallelBuilding = true;
+
+  nativeBuildInputs = [ cmake gcc gcc-unwrapped ];
+
+  cmakeFlags = [ "-DCMAKE_AR=${gcc-unwrapped}/bin/gcc-ar" 
+                 "-DCMAKE_RANLIB=${gcc-unwrapped}/bin/gcc-ranlib" ];
+
+  meta = {
+     description = "An evolutionary simulation framework";
+     homepage = https://messerlab.org/slim/;
+     license = with stdenv.lib.licenses; [ gpl3 ];
+     maintainers = with stdenv.lib.maintainers; [ bzizou ];
+     platforms = stdenv.lib.platforms.all;
+  };
+}
+
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 1aae4e7598e..281816272af 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -21545,6 +21545,8 @@ in
 
   mrbayes = callPackage ../applications/science/biology/mrbayes { };
 
+  messer-slim = callPackage ../applications/science/biology/messer-slim { };
+
   minc_tools = callPackage ../applications/science/biology/minc-tools { };
 
   minc_widgets = callPackage ../applications/science/biology/minc-widgets { };