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python3Packages.cnvkit: fix build

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Jonathan Ringer 2020-07-07 09:34:48 -07:00 committed by Jon
parent 26dea04efc
commit 58134d6358
1 changed files with 4 additions and 0 deletions
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pkgs/development/python-modules/cnvkit/default.nix
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@ -6,6 +6,7 @@
, biopython , biopython
, numpy , numpy
, scipy , scipy
, scikitlearn
, pandas , pandas
, matplotlib , matplotlib
, reportlab , reportlab
@ -29,6 +30,7 @@ buildPythonPackage rec {
biopython biopython
numpy numpy
scipy scipy
scikitlearn
pandas pandas
matplotlib matplotlib
reportlab reportlab
@ -44,6 +46,8 @@ buildPythonPackage rec {
--replace "pandas >= 0.20.1, < 0.25.0" "pandas" --replace "pandas >= 0.20.1, < 0.25.0" "pandas"
''; '';
pythonImportsCheck = [ "cnvlib" ];
meta = with lib; { meta = with lib; {
homepage = "https://cnvkit.readthedocs.io"; homepage = "https://cnvkit.readthedocs.io";
description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data"; description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data";