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Merge pull request #117730 from veprbl/pr/snakemake_6_0_5

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snakemake: 5.28.0 -> 6.0.5
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Sandro 2021-03-27 02:44:44 +01:00 committed by GitHub
commit 53734a4355
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1 changed files with 5 additions and 3 deletions
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8
pkgs/applications/science/misc/snakemake/default.nix
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@ -2,13 +2,14 @@
python3Packages.buildPythonApplication rec { python3Packages.buildPythonApplication rec {
pname = "snakemake"; pname = "snakemake";
version = "5.28.0"; version = "6.0.5";
propagatedBuildInputs = with python3Packages; [ propagatedBuildInputs = with python3Packages; [
appdirs appdirs
ConfigArgParse ConfigArgParse
datrie datrie
docutils docutils
filelock
GitPython GitPython
jsonschema jsonschema
nbformat nbformat
@ -17,19 +18,20 @@ python3Packages.buildPythonApplication rec {
pyyaml pyyaml
ratelimiter ratelimiter
requests requests
smart_open
toposort toposort
wrapt wrapt
]; ];
src = python3Packages.fetchPypi { src = python3Packages.fetchPypi {
inherit pname version; inherit pname version;
sha256 = "2367ce91baf7f8fa7738d33aff9670ffdf5410bbac49aeb209f73b45a3425046"; sha256 = "9441169034cce46086a8b45486d75175db645b932e766d28fed312ec837792d3";
}; };
doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json
meta = with lib; { meta = with lib; {
homepage = "https://snakemake.readthedocs.io"; homepage = "https://snakemake.github.io";
license = licenses.mit; license = licenses.mit;
description = "Python-based execution environment for make-like workflows"; description = "Python-based execution environment for make-like workflows";
longDescription = '' longDescription = ''