diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 9aa6af66ccf..f662c26fe42 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -242,7 +242,6 @@ let ncdf4 = [ pkgs.netcdf ]; ncdf = [ pkgs.netcdf ]; nloptr = [ pkgs.nlopt ]; - npRmpi = [ pkgs.openmpi ]; openssl = [ pkgs.openssl ]; outbreaker = [ pkgs.gsl ]; pbdMPI = [ pkgs.openmpi ]; @@ -607,7 +606,6 @@ let "ripa" "rite" "rnbn" - "rriskDistributions" "rsgcc" "sdcMicroGUI" "sharpshootR" @@ -642,7 +640,6 @@ let packagesToSkipCheck = [ "Rmpi" # tries to run MPI processes "gmatrix" # requires CUDA runtime - "npRmpi" # tries to run MPI processes "sprint" # tries to run MPI processes "pbdMPI" # tries to run MPI processes ]; @@ -687,7 +684,6 @@ let "compendiumdb" # requires Biobase "CORM" # requires limma "cplexAPI" # requires CPLEX - "cqrReg" # requires Rmosek "crmn" # requires pcaMethods, and Biobase "CrypticIBDcheck" # requires rJPSGCS "cudaBayesreg" # requres Rmath @@ -702,6 +698,7 @@ let "dcGOR" # requires dnet "demi" # requires affy, affxparser, and oligo "DepthProc" # requires samr + "DiagrammeR" # requires V8 to build "Digiroo2" # requires spatstat "dixon" # requires spatstat "dnet" # requires supraHex, graph, Rgraphviz, and Biobase @@ -983,12 +980,6 @@ let ]; }); - npRmpi = old.npRmpi.overrideDerivation (attrs: { - configureFlags = [ - "--with-Rmpi-type=OPENMPI" - ]; - }); - Rmpfr = old.Rmpfr.overrideDerivation (attrs: { configureFlags = [ "--with-mpfr-include=${pkgs.mpfr}/include"