diff --git a/pkgs/development/python-modules/bokeh/default.nix b/pkgs/development/python-modules/bokeh/default.nix index 158a3d31882..d5337122120 100644 --- a/pkgs/development/python-modules/bokeh/default.nix +++ b/pkgs/development/python-modules/bokeh/default.nix @@ -1,74 +1,55 @@ -{ lib -, buildPythonPackage +{ buildPythonPackage , fetchPypi -, isPyPy -, mock -, pytest -, flask -, jinja2 -, markupsafe -, werkzeug -, itsdangerous -, dateutil -, requests -, six -, pygments -, pystache -, markdown -, pyyaml -, pyzmq -, tornado -, colorama -, isPy3k , futures -, websocket_client +, isPy3k +, isPyPy +, jinja2 +, lib +, mock , numpy -, pandas -, greenlet -, python -, bkcharts +, nodejs , pillow +, pytest +, python +, python-dateutil +, pyyaml , selenium +, six +, substituteAll +, tornado }: buildPythonPackage rec { pname = "bokeh"; - version = "1.0.4"; + version = "1.3.4"; src = fetchPypi { inherit pname version; - sha256 = "ceeb6a75afc1b2de00c2b8b6da121dec3fb77031326897b80d4375a70e96aebf"; + sha256 = "0m27j29jpi977y95k272xc24qkl5bkniy046cil116hrbgnppng2"; }; - disabled = isPyPy; + patches = [ + (substituteAll { + src = ./hardcode-nodejs-npmjs-paths.patch; + node_bin = "${nodejs}/bin/node"; + npm_bin = "${nodejs}/bin/npm"; + }) + ]; - # Some test that uses tornado fails -# doCheck = false; + disabled = isPyPy; checkInputs = [ mock pytest pillow selenium ]; propagatedBuildInputs = [ pillow - flask jinja2 - markupsafe - werkzeug - itsdangerous - dateutil - requests + python-dateutil six - pygments - pystache - markdown pyyaml - pyzmq tornado - colorama - bkcharts + numpy ] - ++ lib.optionals ( !isPy3k ) [ futures ] - ++ lib.optionals ( !isPy3k && !isPyPy ) [ websocket_client ] - ++ lib.optionals ( !isPyPy ) [ numpy pandas greenlet ]; + ++ lib.optionals ( !isPy3k ) [ futures ]; checkPhase = '' ${python.interpreter} -m unittest discover -s bokeh/tests diff --git a/pkgs/development/python-modules/bokeh/hardcode-nodejs-npmjs-paths.patch b/pkgs/development/python-modules/bokeh/hardcode-nodejs-npmjs-paths.patch new file mode 100644 index 00000000000..f8f33c0021f --- /dev/null +++ b/pkgs/development/python-modules/bokeh/hardcode-nodejs-npmjs-paths.patch @@ -0,0 +1,15 @@ +diff --git a/bokeh/util/compiler.py b/bokeh/util/compiler.py +index a752aad7d..8af05ff63 100644 +--- a/bokeh/util/compiler.py ++++ b/bokeh/util/compiler.py +@@ -442,8 +442,8 @@ def _detect_nodejs(): + raise RuntimeError('node.js v%s or higher is needed to allow compilation of custom models ' % version + + '("conda install nodejs" or follow https://nodejs.org/en/download/)') + +-_nodejs = None +-_npmjs = None ++_nodejs = "@node_bin@" ++_npmjs = "@npm_bin@" + + def _nodejs_path(): + global _nodejs diff --git a/pkgs/development/python-modules/intake/default.nix b/pkgs/development/python-modules/intake/default.nix index c7f6e5c8219..f89b7ab1ce6 100644 --- a/pkgs/development/python-modules/intake/default.nix +++ b/pkgs/development/python-modules/intake/default.nix @@ -4,28 +4,31 @@ , appdirs , dask , holoviews +, hvplot , jinja2 , msgpack-numpy , msgpack-python , numpy , pandas +, panel , python-snappy , requests , ruamel_yaml , six , tornado , pytest -, isPy27 +, pythonOlder }: buildPythonPackage rec { pname = "intake"; - version = "0.4.4"; - disabled = isPy27; + version = "0.5.3"; + + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "3fc1b7c2949c9b4200ecbbfdff17da126981a1d8d95ccb7b7bcca3e3dd849d5e"; + sha256 = "1mbjr4xl4i523bg8k08s5986v2289fznd8cr3j3czn5adi8519j7"; }; checkInputs = [ pytest ]; @@ -33,11 +36,13 @@ buildPythonPackage rec { appdirs dask holoviews + hvplot jinja2 msgpack-numpy msgpack-python numpy pandas + panel python-snappy requests ruamel_yaml @@ -45,10 +50,15 @@ buildPythonPackage rec { tornado ]; + postPatch = '' + # Is in setup_requires but not used in setup.py... + substituteInPlace setup.py --replace "'pytest-runner'" "" + ''; + + # test_discover requires driver_with_entrypoints-0.1.dist-info, which is not included in tarball + # test_filtered_compressed_cache requires calvert_uk_filter.tar.gz, which is not included in tarball checkPhase = '' - # test_filtered_compressed_cache requires calvert_uk_filter.tar.gz, which is not included in tarball - # test_which assumes python for executable name - PATH=$out/bin:$PATH HOME=$(mktemp -d) pytest -k "not test_filtered_compressed_cache and not test_which" + PATH=$out/bin:$PATH HOME=$(mktemp -d) pytest -k "not test_discover and not test_filtered_compressed_cache" ''; meta = with lib; { diff --git a/pkgs/development/python-modules/panel/default.nix b/pkgs/development/python-modules/panel/default.nix index fccd46c605d..4c88f0e1e4b 100644 --- a/pkgs/development/python-modules/panel/default.nix +++ b/pkgs/development/python-modules/panel/default.nix @@ -11,18 +11,13 @@ buildPythonPackage rec { pname = "panel"; - version = "0.4.0"; + version = "0.6.2"; src = fetchPypi { inherit pname version; - sha256 = "21fc6729909dba4ba8c9a84b7fadd293322cc2594d15ac73b0f66a5ceffd1f98"; + sha256 = "04w8jjlf7yz3k84xnacahczc9mmddqyp756rj3n8hclks9c1ww40"; }; - postPatch = '' - substituteInPlace setup.py \ - --replace "testpath<0.4" "testpath" - ''; - propagatedBuildInputs = [ bokeh param diff --git a/pkgs/development/python-modules/param/default.nix b/pkgs/development/python-modules/param/default.nix index 69a2e61e269..cb27fdb64e5 100644 --- a/pkgs/development/python-modules/param/default.nix +++ b/pkgs/development/python-modules/param/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "param"; - version = "1.8.2"; + version = "1.9.1"; src = fetchPypi { inherit pname version; - sha256 = "49927979d4f6c994bcd8f6f7f2b34e3a0a7f0d62404dca6bcae5acde0192bb01"; + sha256 = "1dbnviszdq3d2k3dfwpimb0adf27yzwm4iyv42rk8xvd8c6p9gdi"; }; checkInputs = [ flake8 nose ];