From 466e9cc50d5acc26e5fe43dee17ec3a5185097b0 Mon Sep 17 00:00:00 2001
From: Shea Levy <shea@shealevy.com>
Date: Wed, 12 Aug 2015 21:01:27 -0400
Subject: [PATCH] Add nipype and needed deps
---
pkgs/top-level/python-packages.nix | 69 ++++++++++++++++++++++++++++++
1 file changed, 69 insertions(+)
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 15938e0ad07..fa31cef3b70 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -8316,6 +8316,57 @@ let
};
});
+ nibabel = buildPythonPackage rec {
+ version = "2.0.1";
+ name = "nibabel-${version}";
+
+ src = pkgs.fetchurl {
+ url = "http://pypi.python.org/packages/source/n/nibabel/${name}.tar.gz";
+ md5 = "3be518fde5ec5b09483d4f28c81dc974";
+ };
+
+ propagatedBuildInputs = with self; [
+ numpy
+ nose
+ modules.sqlite3
+ ];
+
+ meta = {
+ homepage = http://nipy.org/nibabel/;
+ description = "Access a multitude of neuroimaging data formats";
+ license = "BSD";
+ };
+ };
+
+ nipype = buildPythonPackage rec {
+ version = "0.10.0";
+ name = "nipype-${version}";
+
+ src = pkgs.fetchurl {
+ url = "http://pypi.python.org/packages/source/n/nipype/${name}.tar.gz";
+ md5 = "480013709633a6d292e2ef668443e0c9";
+ };
+
+ # Tests fail due to getcwd returning ENOENT???
+ doCheck = false;
+
+ propagatedBuildInputs = with self; [
+ numpy
+ dateutil
+ nose
+ traits
+ scipy
+ nibabel
+ networkx
+ ];
+
+ meta = {
+ homepage = http://nipy.org/nipype/;
+ description = "Neuroimaging in Python: Pipelines and Interfaces";
+ license = "BSD";
+ };
+ };
+
nose = buildPythonPackage rec {
version = "1.3.4";
name = "nose-${version}";
@@ -13740,6 +13791,24 @@ let
};
};
+ traits = buildPythonPackage rec {
+ name = "traits-${version}";
+ version = "4.5.0";
+
+ src = pkgs.fetchurl {
+ url = "http://pypi.python.org/packages/source/t/traits/${name}.tar.gz";
+ md5 = "3ad558eebaedc63c29c80183c0371d2f";
+ };
+
+ propagatedBuildInputs = with self; [ numpy ];
+
+ meta = {
+ description = "explicitly typed attributes for Python";
+ homepage = http://pypi.python.org/pypi/traits;
+ license = "BSD";
+ };
+ };
+
transaction = buildPythonPackage rec {
name = "transaction-${version}";