From b0115c2fac63d71eb83108106f2612bb47831497 Mon Sep 17 00:00:00 2001
From: Tom Hunger <tehunger@gmail.com>
Date: Thu, 16 Feb 2017 13:20:53 +0000
Subject: [PATCH 1/4] Logbook: 0.11.3 -> 1.0.0

---
 pkgs/top-level/python-packages.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 63fc33ed17e..6ae7d0c6391 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -28965,14 +28965,14 @@ EOF
 
   Logbook = buildPythonPackage rec {
     name = "Logbook-${version}";
-    version = "0.11.3";
+    version = "1.0.0";
 
     src = pkgs.fetchurl {
       url = "mirror://pypi/L/Logbook/${name}.tar.gz";
-      sha256 = "0bchn00jj0y4dmrmqsm29ffcx37g79jcxjihadmgz2aj0z6dbsrc";
+      sha256 = "0whqbx5p0zkf7gmb5ssnsnhm4kn4drd4x7fbhdi8dnxklqajbnl7";
     };
 
-    buildInputs = [ self.pytest ];
+    buildInputs = [ self.pytest ] ++ optionals (!isPy3k) [ self.mock ];
 
     checkPhase = ''
       find tests -name \*.pyc -delete

From 5e31a7cca61286f90571432f6775d6a908361699 Mon Sep 17 00:00:00 2001
From: Tom Hunger <tehunger@gmail.com>
Date: Thu, 16 Feb 2017 16:05:10 +0000
Subject: [PATCH 2/4] pytables: 3.2.2 -> 3.3.0

---
 pkgs/development/python-modules/tables/default.nix | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/pkgs/development/python-modules/tables/default.nix b/pkgs/development/python-modules/tables/default.nix
index 88a39400c77..e5de7c4e2a4 100644
--- a/pkgs/development/python-modules/tables/default.nix
+++ b/pkgs/development/python-modules/tables/default.nix
@@ -1,17 +1,17 @@
 { stdenv, fetchurl, python, buildPythonPackage
-, cython, bzip2, lzo, numpy, numexpr, hdf5 }:
+, cython, bzip2, lzo, numpy, numexpr, hdf5, six }:
 
 buildPythonPackage rec {
-  version = "3.2.2";
+  version = "3.3.0";
   name = "tables-${version}";
 
   src = fetchurl {
     url = "mirror://pypi/t/tables/${name}.tar.gz";
-    sha256 = "3564b351a71ec1737b503b001eb7ceae1f65d5d6e3ffe1ea75aafba10f37fa84";
+    sha256 = "0b4211s0zzdmh74k49ss0m9lc2ql2iazq2aa95ams6h45vqcr0w3";
   };
 
   buildInputs = [ hdf5 cython bzip2 lzo ];
-  propagatedBuildInputs = [ numpy numexpr ];
+  propagatedBuildInputs = [ numpy numexpr six ];
 
   # The setup script complains about missing run-paths, but they are
   # actually set.

From 90223a9bbd7f44153bb7e45f5fc757c86d67cdd9 Mon Sep 17 00:00:00 2001
From: Tom Hunger <tehunger@gmail.com>
Date: Fri, 17 Feb 2017 08:52:45 +0000
Subject: [PATCH 3/4] vega: add pytest as a build-input.

It's unclear how this worked before but it clearly did because we
have vega running in production.
---
 pkgs/top-level/python-packages.nix | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 6ae7d0c6391..1ca0a76d6bb 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -456,6 +456,7 @@ in {
       sha256 = "08k92afnk0bivm07h1l5nh26xl2rfp7qn03aq17q1hr3fs5r6cdm";
     };
 
+    buildInputs = [ self.pytest ];
     propagatedBuildInputs = with self; [ jupyter_core pandas ];
 
     meta = {

From 5a9e14ee16374313bad0cbac4f3969d132ca2f19 Mon Sep 17 00:00:00 2001
From: Tom Hunger <tehunger@gmail.com>
Date: Fri, 17 Feb 2017 09:14:18 +0000
Subject: [PATCH 4/4] altair: 1.0.0 -> 1.2.0

Also disabling tests because the test runner picks up too much and
then fails.
---
 pkgs/top-level/python-packages.nix | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 1ca0a76d6bb..15c1b2bbb28 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -431,15 +431,19 @@ in {
   };
 
   altair = buildPythonPackage rec {
-    name = "altair-1.0.0";
+    name = "altair-1.2.0";
 
     src = pkgs.fetchurl {
       url = "mirror://pypi/a/altair/${name}.tar.gz";
-      sha256 = "024drhmiw8w3dl7dbal0pvnlfd3sv4n1rqywv2jb488b3fzm704r";
+      sha256 = "05c47dm20p7m0017p2h38il721rxag1q0457dj7whp0k8rc7qd1n";
     };
+    buildInputs = [ self.pytest ];
 
+    checkPhase = ''
+      export LANG=en_US.UTF-8
+      py.test altair --doctest-modules
+    '';
     propagatedBuildInputs = with self; [ vega pandas ipython traitlets ];
-
     meta = {
       description = "A declarative statistical visualization library for Python.";
       homepage = https://github.com/altair-viz/altair;