Merge master into staging-next

pkgs/development/python-modules/aioresponses/default.nix

@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "aioresponses";
-  version = "0.6.4";
+  version = "0.7.1";
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4397ca736238a1ada8c7f47e557dda05e9ecfdd467b9f6b83871efd365af7e9f";
+    sha256 = "f65bba2be1e9a4997ee166bc0161a50be0fef7350ad09e6afdb2adccf74dfefe";
   };
 
   nativeBuildInputs = [

pkgs/development/python-modules/blis/default.nix

@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "blis";
-  version = "0.7.1";
+  version = "0.7.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "014771a0f753a64ef5610c5b3d4a090b263073bdd59b8ad0d872ce1e06e7315a";
+    sha256 = "c14fb9ec3f5ed7c4940c132c7691469ac5d3e302891d95e935623bf1d4e17fbb";
   };
 
   nativeBuildInputs = [

pkgs/development/python-modules/bme680/default.nix

@@ -0,0 +1,37 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, smbus-cffi
+, pytestCheckHook
+}:
+
+buildPythonPackage rec {
+  pname = "bme680";
+  version = "1.0.5";
+
+  src = fetchFromGitHub {
+    owner = "pimoroni";
+    repo = "bme680-python";
+    rev = "v${version}";
+    sha256 = "sha256-oIXh1JnGTI/Cj4MQFpWq+sWR2X+ioCsK0Q+T7wPITCQ=";
+  };
+
+  propagatedBuildInputs = [ smbus-cffi ];
+
+  preBuild = ''
+    cd library
+  '';
+  checkInputs = [ pytestCheckHook ];
+
+  # next release will have tests, but not the current one
+  doCheck = false;
+
+  pythonImportsCheck = [ "bme680" ];
+
+  meta = with lib; {
+    description = "Python library for driving the Pimoroni BME680 Breakout";
+    homepage = "https://github.com/pimoroni/bme680-python";
+    license = licenses.mit;
+    maintainers = with maintainers; [ mic92 ];
+  };
+}

pkgs/development/python-modules/click-help-colors/default.nix

@@ -0,0 +1,29 @@
+{ stdenv, fetchPypi, buildPythonPackage
+, click, pytest
+}:
+
+buildPythonPackage rec {
+  pname = "click-help-colors";
+  version = "0.8";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "EZ5fr2nPyRnJlcWWIyasj9h/EeVqNxr1lOPf2EWPTG4=";
+  };
+
+  propagatedBuildInputs = [ click ];
+
+  # tries to use /homeless-shelter to mimic container usage, etc
+  #doCheck = false;
+  checkInputs = [ pytest ];
+
+  pythonImportsCheck = [ "click_help_colors" ];
+
+  meta = with stdenv.lib; {
+    description = "Colorization of help messages in Click";
+    homepage    = "https://github.com/r-m-n/click-help-colors";
+    license     = licenses.mit;
+    platforms   = platforms.unix;
+    maintainers = with maintainers; [ freezeboy ];
+  };
+}

pkgs/development/python-modules/deepmerge/default.nix

@@ -3,12 +3,12 @@
 
 buildPythonPackage rec {
   pname = "deepmerge";
-  version = "0.1.0";
+  version = "0.1.1";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0d1ab9lxwymqxxd58j50id1wib48xym3ss5xw172i2jfwwwzfdrx";
+    sha256 = "07rcz699fr0jgx6i6fvh8dxa72j7745inix760nw3g46jwk487gs";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/dotnetcore2/default.nix

@@ -1,59 +0,0 @@
-{ stdenv, lib, buildPythonPackage, fetchPypi, python, isPy27
-, dotnet-sdk
-, substituteAll
-, distro
-, unzip
-}:
-
-buildPythonPackage rec {
-  pname = "dotnetcore2";
-  version = "2.1.14";
-  format = "wheel";
-  disabled = isPy27;
-
-  src = fetchPypi {
-    inherit pname version format;
-    python = "py3";
-    platform = "manylinux1_x86_64";
-    sha256 = "0dxp9a73ncjylc09bjwq81fgj5ysk1yi27l8ka5f98121k1kmn6q";
-  };
-
-  nativeBuildInputs = [ unzip ];
-
-  propagatedBuildInputs = [ distro ];
-
-  # needed to apply patches
-  prePatch = ''
-    unzip dist/dotnet*
-  '';
-
-  patches = [
-    ( substituteAll {
-        src = ./runtime.patch;
-        dotnet = dotnet-sdk;
-      }
-    )
-  ];
-
-  # remove bin, which has a broken dotnetcore installation
-  installPhase = ''
-    rm -rf dotnetcore2/bin
-    mkdir -p $out/${python.sitePackages}/
-    cp -r dotnetcore2 $out/${python.sitePackages}/
-  '';
-
-  # no tests, ensure it's one useful function works
-  checkPhase = ''
-    rm -r dotnetcore2 # avoid importing local directory
-    export PYTHONPATH=$out/${python.sitePackages}:$PYTHONPATH
-    ${python.interpreter} -c 'from dotnetcore2 import runtime; print(runtime.get_runtime_path()); runtime.ensure_dependencies()'
-  '';
-
-  meta = with lib; {
-    description = "DotNet Core runtime";
-    homepage = "https://github.com/dotnet/core";
-    license = licenses.mit;
-    platforms = [ "x86_64-linux" ];
-    maintainers = with maintainers; [ jonringer ];
-  };
-}

pkgs/development/python-modules/dotnetcore2/runtime.patch

@@ -1,22 +0,0 @@
-diff --git a/dotnetcore2/runtime.py b/dotnetcore2/runtime.py
-index 475e2b4..5b578ec 100644
---- a/dotnetcore2/runtime.py
-+++ b/dotnetcore2/runtime.py
-@@ -41,6 +41,7 @@ def _get_bin_folder() -> str:
- 
- 
- def get_runtime_path():
-+    return "@dotnet@/dotnet"
-     search_string = os.path.join(_get_bin_folder(), 'dotnet*')
-     matches = [f for f in glob.glob(search_string, recursive=True)]
-     return matches[0]
-@@ -96,8 +97,7 @@ class _FileLock():
- 
- 
- def ensure_dependencies() -> Optional[str]:
--    if dist is None:
--        return None
-+    return None
- 
-     bin_folder = _get_bin_folder()
-     deps_path = os.path.join(bin_folder, 'deps')

pkgs/development/python-modules/flask-compress/default.nix

@@ -3,12 +3,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.5.0";
+  version = "1.8.0";
   pname = "Flask-Compress";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f367b2b46003dd62be34f7fb1379938032656dca56377a9bc90e7188e4289a7c";
+    sha256 = "c132590e7c948877a96d675c13cbfa64edec0faafa2381678dea6f36aa49a552";
   };
 
   propagatedBuildInputs = [ flask brotli ];

pkgs/development/python-modules/flask-paginate/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "flask-paginate";
-  version = "0.5.4";
+  version = "0.7.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "60079a1c4c600cb4d4a9f7c386ea357b5ee02355ae6d6e8b41f769ae3f7af3ad";
+    sha256 = "949b93d0535d1223b91ac0048586bd878aaebf4044c54c1dc3068acc9bdf441f";
   };
 
   propagatedBuildInputs = [ flask ];

pkgs/development/python-modules/google-cloud-iam/default.nix

@@ -0,0 +1,22 @@
+{ lib, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, libcst, mock, proto-plus, pytest-asyncio }:
+
+buildPythonPackage rec {
+  pname = "google-cloud-iam";
+  version = "2.0.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1zxsx5avs8njiyw32zvsx2yblmmiwxy771x334hbgmy0aqms4lak";
+  };
+
+  propagatedBuildInputs = [ google_api_core libcst proto-plus ];
+  checkInputs = [ mock pytestCheckHook pytest-asyncio ];
+
+  meta = with lib; {
+    description = "Google Cloud IAM API client library";
+    homepage = "https://github.com/googleapis/python-iam";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ austinbutler ];
+  };
+}

pkgs/development/python-modules/google_api_core/default.nix

@@ -1,32 +1,27 @@
-{ lib, buildPythonPackage, fetchPypi, pythonOlder, isPy27
-, google_auth, protobuf, googleapis_common_protos, requests, setuptools, grpcio
-, mock
-}:
+{ lib, buildPythonPackage, fetchPypi, pythonOlder, google_auth, protobuf
+, googleapis_common_protos, requests, grpcio, mock, pytest, pytest-asyncio, pytestCheckHook }:
 
 buildPythonPackage rec {
   pname = "google-api-core";
-  version = "1.22.1";
-  disabled = isPy27; # google namespace no longer works on python2
+  version = "1.22.4";
+  disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "35cba563034d668ae90ffe1f03193a84e745b38f09592f60258358b5e5ee6238";
+    sha256 = "06pck3hwl1pks26q843hv6pxchby9viab05mxf72k7ksab17m7aa";
   };
 
-  propagatedBuildInputs = [
-    googleapis_common_protos protobuf
-    google_auth requests setuptools grpcio
-  ];
+  propagatedBuildInputs =
+    [ googleapis_common_protos protobuf google_auth requests grpcio ];
 
-  # requires nox
-  doCheck = false;
-  checkInputs = [ mock ];
+  checkInputs = [ google_auth mock protobuf pytest-asyncio pytestCheckHook ];
 
-  pythonImportsCheck = [
-    "google.auth"
-    "google.protobuf"
-    "google.api"
-  ];
+  # prevent google directory from shadowing google imports
+  preCheck = ''
+    rm -r google
+  '';
+
+  pythonImportsCheck = [ "google.auth" "google.protobuf" "google.api" ];
 
   meta = with lib; {
     description = "Core Library for Google Client Libraries";
@@ -35,7 +30,8 @@ buildPythonPackage rec {
       helpers used by all Google API clients.
     '';
     homepage = "https://github.com/googleapis/python-api-core";
-    changelog = "https://github.com/googleapis/python-api-core/blob/v${version}/CHANGELOG.md";
+    changelog =
+      "https://github.com/googleapis/python-api-core/blob/v${version}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [ ];
   };

pkgs/development/python-modules/google_auth/default.nix

@@ -1,29 +1,19 @@
-{ stdenv, buildPythonPackage, fetchpatch, fetchPypi
-, cachetools
-, flask
-, freezegun
-, mock
-, oauth2client
-, pyasn1-modules
-, pytest
-, pytest-localserver
-, requests
-, responses
-, rsa
-, setuptools
-, six
-, urllib3
-}:
+{ stdenv, buildPythonPackage, fetchpatch, fetchPypi, pythonOlder
+, pytestCheckHook, cachetools, flask, freezegun, mock, oauth2client
+, pyasn1-modules, pytest, pytest-localserver, requests, responses, rsa
+, setuptools, six, urllib3 }:
 
 buildPythonPackage rec {
   pname = "google-auth";
-  version = "1.20.1";
+  version = "1.22.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "2f34dd810090d0d4c9d5787c4ad7b4413d1fbfb941e13682c7a2298d3b6cdcc8";
+    sha256 = "1fs448jcx2cbpk0nq3picndfryjsakmd9allggvh7mrqjiw723ww";
   };
 
+  disabled = pythonOlder "3.5";
+
   propagatedBuildInputs = [ six pyasn1-modules cachetools rsa setuptools ];
 
   checkInputs = [
@@ -31,17 +21,13 @@ buildPythonPackage rec {
     freezegun
     mock
     oauth2client
-    pytest
+    pytestCheckHook
     pytest-localserver
     requests
     responses
     urllib3
   ];
 
-  checkPhase = ''
-    py.test
-  '';
-
   meta = with stdenv.lib; {
     description = "Google Auth Python Library";
     longDescription = ''
@@ -49,7 +35,8 @@ buildPythonPackage rec {
       authentication mechanisms to access Google APIs.
     '';
     homepage = "https://github.com/googleapis/google-auth-library-python";
-    changelog = "https://github.com/googleapis/google-auth-library-python/blob/v${version}/CHANGELOG.md";
+    changelog =
+      "https://github.com/googleapis/google-auth-library-python/blob/v${version}/CHANGELOG.md";
     # Documentation: https://googleapis.dev/python/google-auth/latest/index.html
     license = licenses.asl20;
     maintainers = with maintainers; [ ];

pkgs/development/python-modules/google_cloud_automl/default.nix

@@ -1,34 +1,38 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, enum34
-, google_api_core
-, google_cloud_storage
-, pandas
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pythonOlder, pytestCheckHook, libcst
+, google_api_core, google_cloud_storage, google_cloud_testutils, pandas
+, proto-plus, pytest-asyncio, mock }:
 
 buildPythonPackage rec {
   pname = "google-cloud-automl";
-  version = "1.0.1";
+  version = "2.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f08abe78d37fb94a3748aa43e66dae2bad52f991cc7740501a341bc6f6387fd5";
+    sha256 = "16hr1i2771z4yh19xg6kk037h9cv5j64q5bxb9nmkvj12hdwbwgv";
   };
 
-  checkInputs = [ pandas pytest mock google_cloud_storage ];
-  propagatedBuildInputs = [ enum34 google_api_core ];
+  disabled = pythonOlder "3.6";
+
+  checkInputs = [
+    google_cloud_storage
+    google_cloud_testutils
+    mock
+    pandas
+    pytest-asyncio
+    pytestCheckHook
+  ];
+  propagatedBuildInputs = [ google_api_core libcst proto-plus ];
 
   # ignore tests which need credentials
-  checkPhase = ''
-    pytest tests/unit -k 'not upload and not prediction_client_client_info'
+  disabledTests = [ "test_prediction_client_client_info" ];
+  preCheck = ''
+    rm -r google
+    rm tests/system/gapic/v1beta1/test_system_tables_client_v1.py
   '';
 
   meta = with stdenv.lib; {
     description = "Cloud AutoML API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-automl";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_bigquery/default.nix

@@ -1,42 +1,46 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, freezegun
-, google_resumable_media
-, google_api_core
-, google_cloud_core
-, pandas
-, pyarrow
-, pytest
-, mock
-, ipython
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder, freezegun
+, google_api_core, google_cloud_core, google_cloud_testutils
+, google_resumable_media, grpcio, ipython, mock, pandas, proto-plus, pyarrow }:
 
 buildPythonPackage rec {
   pname = "google-cloud-bigquery";
-  version = "1.26.1";
+  version = "2.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "51c29b95d460486d9e0210f63e8193691cd08480b69775270e84dd3db87c1bf2";
+    sha256 = "0x5g6n151rcdgq4s80f71zpsl7bsvyyrs07l58psdpyd3kwf4sbk";
   };
 
-  checkInputs = [ pytest mock ipython freezegun ];
-  propagatedBuildInputs = [ google_resumable_media google_api_core google_cloud_core pandas pyarrow ];
+  disabled = pythonOlder "3.6";
 
-  # prevent local directory from shadowing google imports
-  # call_api_applying_custom_retry_on_timeout requires credentials
+  checkInputs =
+    [ freezegun google_cloud_testutils ipython mock pytestCheckHook ];
+  propagatedBuildInputs = [
+    google_resumable_media
+    google_api_core
+    google_cloud_core
+    pandas
+    proto-plus
+    pyarrow
+  ];
+
+  # prevent google directory from shadowing google imports
   # test_magics requires modifying sys.path
-  checkPhase = ''
+  preCheck = ''
     rm -r google
-    pytest tests/unit \
-      -k 'not call_api_applying_custom_retry_on_timeout' \
-      --ignore=tests/unit/test_magics.py
+    rm tests/unit/test_magics.py
   '';
 
+  # call_api_applying_custom_retry_on_timeout requires credentials
+  # to_dataframe_timestamp_out_of_pyarrow_bounds has inconsistent results
+  disabledTests = [
+    "call_api_applying_custom_retry_on_timeout"
+    "to_dataframe_timestamp_out_of_pyarrow_bounds"
+  ];
+
   meta = with stdenv.lib; {
     description = "Google BigQuery API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://pypi.org/project/google-cloud-bigquery";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_container/default.nix

@@ -1,23 +1,20 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, grpc_google_iam_v1
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pythonOlder, google_api_core
+, grpc_google_iam_v1, libcst, mock, proto-plus, pytest, pytest-asyncio }:
 
 buildPythonPackage rec {
   pname = "google-cloud-container";
-  version = "2.0.1";
+  version = "2.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6f714e3d427e2b36d1365fc400f4d379972529fb40f798d9c0e06c7c3418fc89";
+    sha256 = "07rcq4c49zfaacyn5df62bs7qjf5hpmdm9mpb6nx510lylq0507x";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ google_api_core grpc_google_iam_v1 ];
+  disabled = pythonOlder "3.6";
+
+  checkInputs = [ mock pytest pytest-asyncio ];
+  propagatedBuildInputs =
+    [ google_api_core grpc_google_iam_v1 libcst proto-plus ];
 
   checkPhase = ''
     pytest tests/unit
@@ -25,7 +22,7 @@ buildPythonPackage rec {
 
   meta = with stdenv.lib; {
     description = "Google Container Engine API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-container";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_core/default.nix

@@ -1,26 +1,30 @@
-{ stdenv, buildPythonPackage, fetchPypi, python
-, google_api_core, grpcio, pytest, mock, setuptools }:
+{ stdenv, buildPythonPackage, fetchPypi, pythonOlder, pytestCheckHook, python
+, google_api_core, grpcio, mock }:
 
 buildPythonPackage rec {
   pname = "google-cloud-core";
-  version = "1.4.1";
+  version = "1.4.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "613e56f164b6bee487dd34f606083a0130f66f42f7b10f99730afdf1630df507";
+    sha256 = "103bgv9d6fw01vbbdx0qxa5gqdzxqmiwlpdvibmqxkhb3c6bgbr1";
   };
 
-  propagatedBuildInputs = [ google_api_core grpcio setuptools ];
-  checkInputs = [ pytest mock ];
+  disabled = pythonOlder "3.5";
 
-  checkPhase = ''
-    cd tests
-    ${python.interpreter} -m unittest discover
+  propagatedBuildInputs = [ google_api_core grpcio ];
+  checkInputs = [ google_api_core mock pytestCheckHook ];
+
+  pythonImportsCheck = [ "google.cloud" ];
+
+  # prevent google directory from shadowing google imports
+  preCheck = ''
+    rm -r google
   '';
 
   meta = with stdenv.lib; {
     description = "API Client library for Google Cloud: Core Helpers";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-cloud-core";
     license = licenses.asl20;
     maintainers = with maintainers; [ ];
   };

pkgs/development/python-modules/google_cloud_error_reporting/default.nix

@@ -1,31 +1,31 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_cloud_logging
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_cloud_logging, google_cloud_testutils, libcst, mock, proto-plus
+, pytest-asyncio }:
 
 buildPythonPackage rec {
   pname = "google-cloud-error-reporting";
-  version = "0.34.0";
+  version = "1.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "34edd11601b17c87a89c2e1cefdc27d975e1e9243a88ba3c0c48bfe6a05c404f";
+    sha256 = "1y5vkkg1cmzshj5j68zk1876857z8a7sjm0wqhf4rzgqgkr2kcdd";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ google_cloud_logging ];
+  disabled = pythonOlder "3.6";
 
-  checkPhase = ''
+  checkInputs = [ google_cloud_testutils mock pytestCheckHook pytest-asyncio ];
+  propagatedBuildInputs = [ google_cloud_logging libcst proto-plus ];
+
+  # Disable tests that require credentials
+  disabledTests = [ "test_report_error_event" "test_report_exception" ];
+  # prevent google directory from shadowing google imports
+  preCheck = ''
     rm -r google
-    pytest tests/unit
   '';
 
   meta = with stdenv.lib; {
     description = "Stackdriver Error Reporting API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-error-reporting";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_kms/default.nix

@@ -1,32 +1,28 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, enum34
-, grpc_google_iam_v1
-, google_api_core
-, pytest
-, mock
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, grpc_google_iam_v1, google_api_core, libcst, mock, proto-plus, pytest-asyncio
 }:
 
 buildPythonPackage rec {
   pname = "google-cloud-kms";
-  version = "2.0.1";
+  version = "2.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c590a8ab12a3f776ab35e570d21c0881f9d73c444bd509e54321a4c715233372";
+    sha256 = "0f3k2ixp1zsgydpvkj75bs2mb805389snyw30hn41c38qq5ksdga";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ enum34 grpc_google_iam_v1 google_api_core ];
+  disabled = pythonOlder "3.6";
 
-  checkPhase = ''
-    pytest tests/unit
-  '';
+  checkInputs = [ mock pytestCheckHook pytest-asyncio ];
+  propagatedBuildInputs =
+    [ grpc_google_iam_v1 google_api_core libcst proto-plus ];
+
+  # Disable tests that need credentials
+  disabledTests = [ "test_list_global_key_rings" ];
 
   meta = with stdenv.lib; {
     description = "Cloud Key Management Service (KMS) API API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-kms";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_logging/default.nix

@@ -1,14 +1,6 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, google_cloud_core
-, pytest
-, mock
-, webapp2
-, django
-, flask
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder, django
+, flask, google_api_core, google_cloud_core, google_cloud_testutils, mock
+, webapp2 }:
 
 buildPythonPackage rec {
   pname = "google-cloud-logging";
@@ -19,17 +11,27 @@ buildPythonPackage rec {
     sha256 = "cb0d4af9d684eb8a416f14c39d9fa6314be3adf41db2dd8ee8e30db9e8853d90";
   };
 
-  checkInputs = [ pytest mock webapp2 django flask ];
+  disabled = pythonOlder "3.5";
+
+  checkInputs =
+    [ django flask google_cloud_testutils mock pytestCheckHook webapp2 ];
   propagatedBuildInputs = [ google_api_core google_cloud_core ];
 
-  checkPhase = ''
+  # api_url test broken, fix not yet released
+  # https://github.com/googleapis/python-logging/pull/66
+  disabledTests =
+    [ "test_build_api_url_w_custom_endpoint" "test_write_log_entries" ];
+
+  # prevent google directory from shadowing google imports
+  # remove system integration tests
+  preCheck = ''
     rm -r google
-    pytest tests/unit
+    rm tests/system/test_system.py
   '';
 
   meta = with stdenv.lib; {
     description = "Stackdriver Logging API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-logging";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_pubsub/default.nix

@@ -1,36 +1,34 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, enum34
-, grpc_google_iam_v1
-, google_api_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pythonOlder, pytestCheckHook
+, google_api_core, google_cloud_testutils, grpc_google_iam_v1, libcst, mock
+, proto-plus, pytest-asyncio }:
 
 buildPythonPackage rec {
   pname = "google-cloud-pubsub";
-  version = "1.7.0";
+  version = "2.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c8d098ebd208d00c8f3bb55eefecd8553e7391d59700426a97d35125f0dcb248";
+    sha256 = "0358g5q4igq1pgy8dznbbkc6y7zf36y4m81hhh8hvzzhaa37vc22";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ enum34 grpc_google_iam_v1 google_api_core ];
+  disabled = pythonOlder "3.6";
 
-  # tests don't clean up file descriptors correctly
-  doCheck = false;
-  checkPhase = ''
-    pytest tests/unit
+  checkInputs = [ google_cloud_testutils mock pytestCheckHook pytest-asyncio ];
+  propagatedBuildInputs =
+    [ grpc_google_iam_v1 google_api_core libcst proto-plus ];
+
+  # prevent google directory from shadowing google imports
+  # Tests in pubsub_v1 attempt to contact pubsub.googleapis.com
+  preCheck = ''
+    rm -r google
+    rm -r tests/unit/pubsub_v1
   '';
 
   pythonImportsCheck = [ "google.cloud.pubsub" ];
 
   meta = with stdenv.lib; {
     description = "Google Cloud Pub/Sub API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://pypi.org/project/google-cloud-pubsub";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_resource_manager/default.nix

@@ -1,11 +1,5 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_cloud_core
-, google_api_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_cloud_core, google_api_core, mock, pytest }:
 
 buildPythonPackage rec {
   pname = "google-cloud-resource-manager";
@@ -16,17 +10,24 @@ buildPythonPackage rec {
     sha256 = "de7eba5235df61deee2291a2fe70b904154df613a334109488afdea7a4c0011f";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ google_cloud_core google_api_core ];
+  disabled = pythonOlder "3.5";
 
-  checkPhase = ''
+  checkInputs = [ mock pytestCheckHook ];
+  propagatedBuildInputs = [ google_api_core google_cloud_core ];
+
+  # api_url test broken, fix not yet released
+  # https://github.com/googleapis/python-resource-manager/pull/31
+  disabledTests =
+    [ "api_url_no_extra_query_param" "api_url_w_custom_endpoint" ];
+
+  # prevent google directory from shadowing google imports
+  preCheck = ''
     rm -r google
-    pytest tests/unit
   '';
 
   meta = with stdenv.lib; {
     description = "Google Cloud Resource Manager API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-resource-manager";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_runtimeconfig/default.nix

@@ -1,11 +1,5 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, google_cloud_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, google_cloud_core, mock }:
 
 buildPythonPackage rec {
   pname = "google-cloud-runtimeconfig";
@@ -16,18 +10,24 @@ buildPythonPackage rec {
     sha256 = "3d125c01817d5bef2b644095b044d22b03b9d8d4591088cadd8e97851f7a150a";
   };
 
-  checkInputs = [ pytest mock ];
+  disabled = pythonOlder "3.5";
+
+  checkInputs = [ mock pytestCheckHook ];
   propagatedBuildInputs = [ google_api_core google_cloud_core ];
 
-  # ignore tests which require credentials or network
-  checkPhase = ''
+  # api_url test broken, fix not yet released
+  # https://github.com/googleapis/python-resource-manager/pull/31
+  # Client tests require credentials
+  disabledTests = [ "build_api_url_w_custom_endpoint" "client_options" ];
+
+  # prevent google directory from shadowing google imports
+  preCheck = ''
     rm -r google
-    pytest tests/unit -k 'not client and not extra_headers'
   '';
 
   meta = with stdenv.lib; {
     description = "Google Cloud RuntimeConfig API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://pypi.org/project/google-cloud-runtimeconfig";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_spanner/default.nix

@@ -1,35 +1,32 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, grpc_google_iam_v1
-, grpcio-gcp
-, google_api_core
-, google_cloud_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, grpc_google_iam_v1, grpcio-gcp, google_api_core, google_cloud_core
+, google_cloud_testutils, mock, pytest }:
 
 buildPythonPackage rec {
   pname = "google-cloud-spanner";
-  version = "1.17.1";
+  version = "1.19.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3240a04eaa6496e9d8bf4929f4ff04de1652621fd49555eb83b743c48ed9ca04";
+    sha256 = "0b9ifh9i4hkcs19b4l6v8j8v93yd8p3j19qrrjvvf5a44bc7bhsh";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ grpcio-gcp grpc_google_iam_v1 google_api_core google_cloud_core ];
+  disabled = pythonOlder "3.5";
 
-  # avoid importing local package
-  checkPhase = ''
+  checkInputs = [ google_cloud_testutils mock pytestCheckHook ];
+  propagatedBuildInputs =
+    [ grpcio-gcp grpc_google_iam_v1 google_api_core google_cloud_core ];
+
+  # prevent google directory from shadowing google imports
+  # remove tests that require credentials
+  preCheck = ''
     rm -r google
-    pytest tests/unit
+    rm tests/system/test_system.py
   '';
 
   meta = with stdenv.lib; {
     description = "Cloud Spanner API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://pypi.org/project/google-cloud-spanner";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_storage/default.nix

@@ -1,13 +1,7 @@
-{ lib
-, buildPythonPackage
-, fetchPypi
-, google_resumable_media
-, google_api_core
-, google_cloud_core
-, pytest
-, mock
-, setuptools
-}:
+{ lib, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, google_auth, google-cloud-iam, google_cloud_core
+, google_cloud_kms, google_cloud_testutils, google_resumable_media, mock
+, requests }:
 
 buildPythonPackage rec {
   pname = "google-cloud-storage";
@@ -18,27 +12,36 @@ buildPythonPackage rec {
     sha256 = "da12b7bd79bbe978a7945a44b600604fbc10ece2935d31f243e751f99135e34f";
   };
 
+  disabled = pythonOlder "3.5";
+
   propagatedBuildInputs = [
     google_api_core
+    google_auth
     google_cloud_core
     google_resumable_media
-    setuptools
+    requests
   ];
   checkInputs = [
+    google-cloud-iam
+    google_cloud_kms
+    google_cloud_testutils
     mock
-    pytest
+    pytestCheckHook
   ];
 
-  # remove directory from interferring with importing modules
-  # ignore tests which require credentials
-  checkPhase = ''
+  # disable tests which require credentials
+  disabledTests = [ "create" "get" "post" "test_build_api_url" ];
+
+  # prevent google directory from shadowing google imports
+  # remove tests which require credentials
+  preCheck = ''
     rm -r google
-    pytest tests/unit -k 'not (create or get or post)'
+    rm tests/system/test_system.py tests/unit/test_client.py
   '';
 
   meta = with lib; {
     description = "Google Cloud Storage API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-storage";
     license = licenses.asl20;
     maintainers = with maintainers; [ costrouc ];
   };

pkgs/development/python-modules/google_cloud_testutils/default.nix

@@ -1,34 +1,22 @@
-{ stdenv
-, buildPythonPackage
-, fetchFromGitHub
-, six
-, google_auth
-}:
+{ stdenv, buildPythonPackage, fetchPypi, google_auth, pytest, six }:
 
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "google-cloud-testutils";
-  version = "unstable-36ffa923c7037e8b4fdcaa76272cb6267e908a9d";
+  version = "0.1.0";
 
-  # google-cloud-testutils is not "really"
-  # released as a python package
-  # but it is required for google-cloud-* tests
-  # so why not package it as a module
-  src = fetchFromGitHub {
-    owner = "googleapis";
-    repo = "google-cloud-python";
-    rev = "36ffa923c7037e8b4fdcaa76272cb6267e908a9d";
-    sha256 = "1fvcnssmpgf4lfr7l9h7cz984rbc5mfr1j1br12japcib5biwzjy";
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1bn1pz00lxym3vkl6l45b3nydpmfdvmylwggh2lspldrxwx39a0k";
   };
 
-  propagatedBuildInputs = [ six google_auth ];
+  propagatedBuildInputs = [ google_auth six ];
 
-  postPatch = ''
-    cd test_utils
-  '';
+  # There are no tests
+  doCheck = false;
 
   meta = with stdenv.lib; {
     description = "System test utilities for google-cloud-python";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-test-utils";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_texttospeech/default.nix

@@ -1,10 +1,5 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, libcst, mock, proto-plus, pytest-asyncio, }:
 
 buildPythonPackage rec {
   pname = "google-cloud-texttospeech";
@@ -15,16 +10,17 @@ buildPythonPackage rec {
     sha256 = "cbbd397e72b6189668134f3c8e8c303198188334a4e6a5f77cc90c3220772f9e";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ google_api_core ];
+  disabled = pythonOlder "3.5";
 
-  checkPhase = ''
-    pytest tests/unit
-  '';
+  checkInputs = [ mock pytest-asyncio pytestCheckHook ];
+  propagatedBuildInputs = [ google_api_core libcst proto-plus ];
+
+  # Disable tests that require credentials
+  disabledTests = ["test_synthesize_speech" "test_list_voices"];
 
   meta = with stdenv.lib; {
     description = "Google Cloud Text-to-Speech API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-texttospeech";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_translate/default.nix

@@ -1,12 +1,6 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, google_cloud_core
-, grpcio
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, google_cloud_core, google_cloud_testutils, grpcio, libcst
+, mock, proto-plus, pytest-asyncio }:
 
 buildPythonPackage rec {
   pname = "google-cloud-translate";
@@ -17,18 +11,29 @@ buildPythonPackage rec {
     sha256 = "ecdea3e176e80f606d08c4c7fd5acea6b3dd960f4b2e9a65951aaf800350a759";
   };
 
-  # google_cloud_core[grpc] -> grpcio
-  propagatedBuildInputs = [ google_api_core google_cloud_core grpcio ];
+  disabled = pythonOlder "3.6";
 
-  checkInputs = [ pytest mock ];
-  checkPhase = ''
-    cd tests # prevent local google/__init__.py from getting loaded
-    pytest unit -k 'not extra_headers'
+  # google_cloud_core[grpc] -> grpcio
+  propagatedBuildInputs =
+    [ google_api_core google_cloud_core grpcio libcst proto-plus ];
+
+  checkInputs = [ google_cloud_testutils mock pytest-asyncio pytestCheckHook ];
+
+  # test_http.py broken, fix not yet released
+  # https://github.com/googleapis/python-translate/pull/69
+  disabledTests = [
+    "test_build_api_url_w_extra_query_params"
+    "test_build_api_url_no_extra_query_params"
+    "test_build_api_url_w_custom_endpoint"
+  ];
+
+  preCheck = ''
+    rm -r google
   '';
 
   meta = with stdenv.lib; {
     description = "Google Cloud Translation API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-translate";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/google_cloud_websecurityscanner/default.nix

@@ -1,10 +1,5 @@
-{ stdenv
-, buildPythonPackage
-, fetchPypi
-, google_api_core
-, pytest
-, mock
-}:
+{ stdenv, buildPythonPackage, fetchPypi, pytestCheckHook, pythonOlder
+, google_api_core, libcst, mock, proto-plus, pytest-asyncio }:
 
 buildPythonPackage rec {
   pname = "google-cloud-websecurityscanner";
@@ -15,16 +10,14 @@ buildPythonPackage rec {
     sha256 = "1de60f880487b898b499345f46f7acf38651f5356ebca8673116003a57f25393";
   };
 
-  checkInputs = [ pytest mock ];
-  propagatedBuildInputs = [ google_api_core ];
+  disabled = pythonOlder "3.6";
 
-  checkPhase = ''
-    pytest tests/unit
-  '';
+  checkInputs = [ mock pytest-asyncio pytestCheckHook ];
+  propagatedBuildInputs = [ google_api_core libcst proto-plus ];
 
   meta = with stdenv.lib; {
     description = "Google Cloud Web Security Scanner API client library";
-    homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python";
+    homepage = "https://github.com/googleapis/python-websecurityscanner";
     license = licenses.asl20;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/gradient_sdk/default.nix

@@ -0,0 +1,25 @@
+{ stdenv, fetchPypi, buildPythonPackage
+, hyperopt
+}:
+
+buildPythonPackage rec {
+  pname = "gradient_sdk";
+  version = "0.0.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "Q9oeYjjgJf2lhxW1ypsweQAPpMglmW9PxgzMsgTqJkY=";
+  };
+
+  propagatedBuildInputs = [ hyperopt ];
+
+  pythonImportsCheck = [ "gradient_sdk" ];
+
+  meta = with stdenv.lib; {
+    description = "Gradient ML SDK";
+    homepage    = "https://github.com/Paperspace/gradient-sdk";
+    license     = licenses.mit;
+    platforms   = platforms.unix;
+    maintainers = with maintainers; [ freezeboy ];
+  };
+}

pkgs/development/python-modules/gradient_statsd/default.nix

@@ -0,0 +1,26 @@
+{ lib, stdenv, fetchPypi, buildPythonPackage
+, boto3, requests, datadog, configparser, python
+}:
+
+buildPythonPackage rec {
+  pname = "gradient_statsd";
+  version = "1.0.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "iWlNX43ZtvU73wz4+8DgDulQNOnssJGxTBkvAaLj530=";
+  };
+
+  propagatedBuildInputs = [ requests datadog ]
+    ++ lib.optional python.isPy2 configparser;
+
+  pythonImportsCheck = [ "gradient_statsd" ];
+
+  meta = with stdenv.lib; {
+    description = "Wrapper around the DogStatsd client";
+    homepage    = "https://paperspace.com";
+    license     = licenses.mit;
+    platforms   = platforms.unix;
+    maintainers = with maintainers; [ freezeboy ];
+  };
+}

pkgs/development/python-modules/hbmqtt/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, buildPythonPackage, fetchPypi, isPy3k
+{ stdenv, buildPythonPackage, fetchPypi, isPy3k, setuptools
 , transitions, websockets, passlib, docopt, pyyaml, nose }:
 
 buildPythonPackage rec {
@@ -12,7 +12,9 @@ buildPythonPackage rec {
     sha256 = "1n9c8yj11npiq9qxivwmfhib1qkjpcyw42a7q0w641bdrz3x6r37";
   };
 
-  propagatedBuildInputs = [ transitions websockets passlib docopt pyyaml ];
+  propagatedBuildInputs = [
+    transitions websockets passlib docopt pyyaml setuptools
+  ];
 
   postPatch = ''
     # test tries to bind same port multiple times and fails

pkgs/development/python-modules/hyperopt/default.nix

@@ -0,0 +1,29 @@
+{ stdenv, fetchPypi, buildPythonPackage
+, cloudpickle, numpy, future, networkx
+, six, tqdm, scipy, pymongo
+}:
+
+buildPythonPackage rec {
+  pname = "hyperopt";
+  version = "0.1.2";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "34xIpivBYUvcN/XMVwBkqTpLgaFlWWIduazuP2U2tlg=";
+  };
+
+  propagatedBuildInputs = [ future cloudpickle numpy networkx six tqdm scipy pymongo ];
+
+  # tries to use /homeless-shelter to mimic container usage, etc
+  doCheck = false;
+
+  pythonImportsCheck = [ "hyperopt" ];
+
+  meta = with stdenv.lib; {
+    description = "Distributed Asynchronous Hyperparameter Optimization";
+    homepage    = "http://hyperopt.github.com/hyperopt/";
+    license     = licenses.bsd2;
+    platforms   = platforms.unix;
+    maintainers = with maintainers; [ freezeboy ];
+  };
+}

pkgs/development/python-modules/inform/default.nix

@@ -0,0 +1,36 @@
+{ lib, buildPythonPackage, fetchFromGitHub
+, arrow
+, six
+, hypothesis
+, pytest
+, pytestCheckHook
+}:
+
+buildPythonPackage rec {
+  pname = "inform";
+  version = "1.23";
+
+  src = fetchFromGitHub {
+    owner = "KenKundert";
+    repo = "inform";
+    rev = "v${version}";
+    sha256 = "02zlprvidkz51aypss4knhv7dbr0sbpz3caqjzf9am2n1jx2viyy";
+  };
+
+  propagatedBuildInputs = [ arrow six ];
+
+  checkInputs = [ pytest hypothesis ];
+  checkPhase = "./test.doctests.py && ./test.inform.py && pytest";
+
+  meta = with lib; {
+    description = "Print and logging utilities";
+    longDescription = ''
+      Inform is designed to display messages from programs that are typically
+      run from a console. It provides a collection of ‘print’ functions that
+      allow you to simply and cleanly print different types of messages.
+    '';
+    homepage = "https://inform.readthedocs.io";
+    license = licenses.gpl3Only;
+    maintainers = with maintainers; [ jeremyschlatter ];
+  };
+}

pkgs/development/python-modules/iniconfig/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "iniconfig";
-  version = "1.0.1";
+  version = "1.1.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0s9z9n4603fdpv2vzh6ddzfgsjmb09n6qalkjl2xwrss6n4jzyg5";
+    sha256 = "bc3af051d7d14b2ee5ef9969666def0cd1a000e121eaea580d4a313df4b37f32";
   };
 
   doCheck = false; # avoid circular import with pytest
@@ -14,7 +14,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "brain-dead simple parsing of ini files";
-    homepage = "https://github.com/CHANGE/iniconfig/";
+    homepage = "https://github.com/RonnyPfannschmidt/iniconfig";
     license = licenses.mit;
     maintainers = with maintainers; [ jonringer ];
   };

pkgs/development/python-modules/libtmux/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "libtmux";
-  version = "0.8.3";
+  version = "0.8.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a4c7379604ccdc684aa865723211184709f9a2b45511772989b5f26ad156650e";
+    sha256 = "1d35b9f8451944d31c5ed22ed9e6c8e18034adcc75718fcc5b27fbd9621543e1";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/msgpack-numpy/default.nix

@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "msgpack-numpy";
-  version = "0.4.6.1";
+  version = "0.4.7.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9f9b57abb2b155c2d3e411c2dd5b98f14998bd053a20c6ed0ab64a6ceb8ad51d";
+    sha256 = "7eaf51acf82d7c467d21aa71df94e1c051b2055e54b755442051b474fa7cf5e1";
   };
 
   buildInputs = [

pkgs/development/python-modules/mypy/default.nix

@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "mypy";
-  version = "0.782";
+  version = "0.790";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "030kn709515452n6gy2i1d9fg6fyrkmdz228lfpmbslybsld9xzg";
+    sha256 = "sha256-KyG6Ra2e8uLriM5K6t0BEtD1AmQYMkF2/UlKaCS3SXU=";
   };
 
   propagatedBuildInputs = [ typed-ast psutil mypy-extensions typing-extensions ];

pkgs/development/python-modules/nbsmoke/default.nix

@@ -14,11 +14,11 @@
 
 buildPythonPackage rec {
   pname = "nbsmoke";
-  version = "0.4.1";
+  version = "0.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "06as8vh17m0nkp3fpkp42m990a5zjfl2iaa17da99ksh7886mjpc";
+    sha256 = "2400d7878e97714e822ab200a71fc71ede487e671f42b4b411745dba95f9cb32";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/nestedtext/default.nix

@@ -0,0 +1,43 @@
+{ lib, buildPythonPackage, fetchFromGitHub
+, inform
+, pytestCheckHook
+, docopt
+, natsort
+, voluptuous
+}:
+
+buildPythonPackage rec {
+  pname = "nestedtext";
+  version = "1.2";
+
+  src = fetchFromGitHub {
+    owner = "KenKundert";
+    repo = "nestedtext";
+    rev = "v${version}";
+    fetchSubmodules = true;
+    sha256 = "1dwks5apghg29aj90nc4qm0chk195jh881297zr1wk7mqd2n159y";
+  };
+
+  propagatedBuildInputs = [ inform ];
+
+  checkInputs = [ pytestCheckHook docopt natsort voluptuous ];
+  pytestFlagsArray = [ "--ignore=build" ]; # Avoids an ImportMismatchError.
+
+  meta = with lib; {
+    description = "A human friendly data format";
+    longDescription = ''
+      NestedText is a file format for holding data that is to be entered,
+      edited, or viewed by people. It allows data to be organized into a nested
+      collection of dictionaries, lists, and strings. In this way it is similar
+      to JSON, YAML and TOML, but without the complexity and risk of YAML and
+      without the syntactic clutter of JSON and TOML. NestedText is both simple
+      and natural. Only a small number of concepts and rules must be kept in
+      mind when creating it. It is easily created, modified, or viewed with a
+      text editor and easily understood and used by both programmers and
+      non-programmers.
+    '';
+    homepage = "https://nestedtext.org";
+    license = licenses.mit;
+    maintainers = with maintainers; [ jeremyschlatter ];
+  };
+}

pkgs/development/python-modules/nix-prefetch-github/default.nix

@@ -15,11 +15,11 @@
 
 buildPythonPackage rec {
   pname = "nix-prefetch-github";
-  version = "4.0";
+  version = "4.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-STUyMUCWAHfDA6dkpiOqSRBL3/tubedUbWa94Kp/764=";
+    sha256 = "asfRohjOgYxMV/wprKvxUD328GVJQkAYnuAkE09kKgs=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/numpy-stl/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "numpy-stl";
-  version = "2.11.2";
+  version = "2.12.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1dil1rklb41m3v6a0i93ymimv453whsg1m9z6g0z17jbg7gmc98r";
+    sha256 = "10912d7749ab02b0ee2ee61fc04c38fa211fc9d00a9b73a7d1c2465c53c1abf5";
   };
 
   checkInputs = [ pytest pytestrunner ];

pkgs/development/python-modules/objgraph/default.nix

@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "objgraph";
-  version = "3.4.1";
+  version = "3.5.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bf29512d7f8b457b53fa0722ea59f516abb8abc59b78f97f0ef81394a0c615a7";
+    sha256 = "4752ca5bcc0e0512e41b8cc4d2780ac2fd3b3eabd03b7e950a5594c06203dfc4";
   };
 
   # Tests fail with PyPy.

pkgs/development/python-modules/paperspace/default.nix

@@ -1,5 +1,7 @@
 { stdenv, fetchPypi, buildPythonPackage
-, boto3, requests
+, boto3, requests, gradient_statsd, terminaltables
+, click-completion , click-didyoumean, click-help-colors
+, colorama, requests_toolbelt, gradient_sdk, progressbar2
 }:
 
 buildPythonPackage rec {
@@ -11,7 +13,10 @@ buildPythonPackage rec {
     sha256 = "7959305128fea6da8ca0cdc528783a89859dacb9b54bf8eb89fd04a518872191";
   };
 
-  propagatedBuildInputs = [ boto3 requests ];
+  propagatedBuildInputs = [ boto3 requests gradient_statsd terminaltables
+    click-completion click-didyoumean click-help-colors requests_toolbelt
+    colorama gradient_sdk progressbar2
+  ];
 
   # tries to use /homeless-shelter to mimic container usage, etc
   doCheck = false;
@@ -22,6 +27,5 @@ buildPythonPackage rec {
     license     = licenses.isc;
     platforms   = platforms.unix;
     maintainers = with maintainers; [ thoughtpolice ];
-    broken = true;
   };
 }

pkgs/development/python-modules/param/default.nix

@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "param";
-  version = "1.9.3";
+  version = "1.10.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "10crjlsn5vx03xwlnhga9faqq2rlw0qwabi45vnvhmz22qbd8w43";
+    sha256 = "a284c1b42aff6367e8eea2f649d4f3f70a9f16c6f17d8ad672a31ff36089f995";
   };
 
   checkInputs = [ flake8 nose ];

pkgs/development/python-modules/poetry/default.nix

@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "poetry";
-  version = "1.1.1";
+  version = "1.1.4";
   format = "pyproject";
   disabled = isPy27;
 
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "python-poetry";
     repo = pname;
     rev = version;
-    sha256 = "1j3ij8qsd709p7ww5r4759f2xnk2s7g40kzm9vx99l98zw890g05";
+    sha256 = "0lx3qpz5dad0is7ki5a4vxphvc8cm8fnv4bmrx226a6nvvaj6ahs";
   };
 
   postPatch = ''

pkgs/development/python-modules/proto-plus/default.nix

@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "proto-plus";
-  version = "1.10.1";
+  version = "1.11.0";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0n8ia51jg2dkab2sf0qnh39bssqhz65ybcqr78f3zzf7ja923lkr";
+    sha256 = "416a0f13987789333cd8760a0ee998f8eccd6d7165ee9f283d64ca2de3e8774d";
   };
 
   propagatedBuildInputs = [ protobuf ];

pkgs/development/python-modules/psautohint/default.nix

@@ -6,14 +6,14 @@
 
 buildPythonPackage rec {
   pname = "psautohint";
-  version = "2.1.1";
+  version = "2.1.2";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner  = "adobe-type-tools";
     repo   = pname;
-    sha256 = "00n9bycjmvx1fb4332bdj53f01q86ajndrvid9idpiyzybmd5vp4";
+    sha256 = "1s2l54gzn11y07zaggprwif7r3ia244qijjhkbvjdx4jsgc5df8n";
     rev    = "v${version}";
     fetchSubmodules = true; # data dir for tests
   };

pkgs/development/python-modules/pyelftools/default.nix

@@ -15,7 +15,7 @@ buildPythonPackage rec {
     sha256 = "sha256-O7l1kj0k8bOSOtZJVzS674oVnM+X3oP00Ybs0qjb64Q=";
   };
 
-  doCheck = stdenv.is64bit;
+  doCheck = stdenv.is64bit && !stdenv.isDarwin;
 
   checkPhase = ''
     patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" test/external_tools/readelf

pkgs/development/python-modules/pyosmium/default.nix

@@ -1,16 +1,18 @@
 { lib, buildPythonPackage, fetchFromGitHub, cmake, python
 , libosmium, protozero, boost, expat, bzip2, zlib, pybind11
-, nose, shapely, mock, isPy3k }:
+, nose, shapely, pythonOlder, isPyPy }:
 
 buildPythonPackage rec {
   pname = "pyosmium";
-  version = "2.15.3";
+  version = "3.0.1";
+
+  disabled = pythonOlder "3.4" || isPyPy;
 
   src = fetchFromGitHub {
     owner = "osmcode";
     repo = pname;
     rev = "v${version}";
-    sha256 = "1523ym9i4rnwi5kcp7n2lm67kxlhar8xlv91s394ixzwax9bgg7w";
+    sha256 = "06jngbmmmswhyi5q5bjph6gwss28d2azn5414zf0arik5bcvz128";
   };
 
   nativeBuildInputs = [ cmake ];
@@ -18,7 +20,7 @@ buildPythonPackage rec {
 
   preBuild = "cd ..";
 
-  checkInputs = [ nose shapely ] ++ lib.optionals (!isPy3k) [ mock ];
+  checkInputs = [ nose shapely ];
 
   checkPhase = "(cd test && ${python.interpreter} run_tests.py)";
 

pkgs/development/python-modules/pypass/default.nix

@@ -0,0 +1,84 @@
+{ buildPythonPackage
+, click
+, colorama
+, enum34
+, fetchPypi
+, git
+, gnugrep
+, gnupg
+, nose
+, pbr
+, pexpect
+, pythonAtLeast
+, pythonOlder
+, stdenv
+, substituteAll
+, tree
+, xclip
+}:
+
+# NOTE: pypass can also be used as an application, but probably the most
+# important usecase is as a library. So, let's use buildPythonPackage and
+# support any Python version instead of defining it as an application with
+# buildPythonApplication.
+buildPythonPackage rec {
+  pname = "pypass";
+  version = "0.2.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "1nm4mj7pd7gz4ghic6b3wrnd1b59hd1f0axavdabfl79wy511l7r";
+  };
+
+  # Set absolute nix store paths to the executables that pypass uses
+  patches = [
+    (substituteAll {
+      src = ./mark-executables.patch;
+      git_exec = "${git}/bin/git";
+      grep_exec = "${gnugrep}/bin/grep";
+      gpg_exec = "${gnupg}/bin/gpg2";
+      tree_exec = "${tree}/bin/tree";
+      xclip_exec = "${xclip}/bin/xclip";
+    })
+  ];
+
+  # Remove enum34 requirement if Python >= 3.4
+  postPatch = stdenv.lib.optionalString (pythonAtLeast "3.4") ''
+    substituteInPlace requirements.txt --replace "enum34" ""
+  '';
+
+  nativeBuildInputs = [ pbr ];
+
+  propagatedBuildInputs = [
+    click
+    colorama
+    pexpect
+  ] ++ stdenv.lib.optional (pythonOlder "3.4") enum34;
+
+  checkInputs = [ nose ];
+
+  # Configuration so that the tests work
+  preCheck = ''
+    HOME=$TEMP ${git}/bin/git config --global user.email "nix-builder@nixos.org"
+    HOME=$TEMP ${git}/bin/git config --global user.name "Nix Builder"
+    HOME=$TEMP ${git}/bin/git config --global pull.ff only
+    HOME=$TEMP make setup_gpg
+  '';
+
+  # Run tests but exclude the test that uses clipboard as I wasn't able to make
+  # it work - probably the X clipboard just doesn't work in the build
+  # environment..
+  checkPhase = ''
+    runHook preCheck
+    HOME=$TEMP GNUPGHOME=pypass/tests/gnupg nosetests -v --exclude=test_show_clip .
+    runHook postCheck
+  '';
+
+  meta = {
+    description = "Password manager pass in Python";
+    homepage = "https://github.com/aviau/python-pass";
+    license = stdenv.lib.licenses.gpl3Plus;
+    platforms = stdenv.lib.platforms.all;
+    maintainers = with stdenv.lib.maintainers; [ jluttine ];
+  };
+}

pkgs/development/python-modules/pypass/mark-executables.patch

@@ -0,0 +1,255 @@
+diff --git a/Makefile b/Makefile
+index 1ef67c8..d49031a 100644
+--- a/Makefile
++++ b/Makefile
+@@ -16,5 +16,5 @@ test: kill build
+ setup_gpg: pypass/tests/gnupg
+ pypass/tests/gnupg: pypass/tests/test_key_sec.asc pypass/tests/test_ownertrust.txt
+ 	mkdir -m 700 -p pypass/tests/gnupg
+-	GNUPGHOME=pypass/tests/gnupg gpg --allow-secret-key-import --import pypass/tests/test_key_sec.asc
+-	GNUPGHOME=pypass/tests/gnupg gpg --import-ownertrust pypass/tests/test_ownertrust.txt
++	GNUPGHOME=pypass/tests/gnupg @gpg_exec@ --allow-secret-key-import --import pypass/tests/test_key_sec.asc
++	GNUPGHOME=pypass/tests/gnupg @gpg_exec@ --import-ownertrust pypass/tests/test_ownertrust.txt
+diff --git a/pypass/command.py b/pypass/command.py
+index 4616a5f..a72cf5d 100644
+--- a/pypass/command.py
++++ b/pypass/command.py
+@@ -173,7 +173,7 @@ def show(config, path, clip):
+     if clip:
+         xclip = subprocess.Popen(
+             [
+-                'xclip',
++                '@xclip_exec@',
+                 '-selection', 'clipboard'
+             ],
+             stdin=subprocess.PIPE
+@@ -206,7 +206,7 @@ def connect(config, path):
+ def ls(config, subfolder):
+     tree = subprocess.Popen(
+         [
+-            'tree',
++            '@tree_exec@',
+             '-C',
+             '-l',
+             '--noreport',
+@@ -239,7 +239,7 @@ def find(config, search_terms):
+ 
+     tree = subprocess.Popen(
+         [
+-            'tree',
++            '@tree_exec@',
+             '-C',
+             '-l',
+             '--noreport',
+@@ -273,7 +273,7 @@ def grep(config, search_string):
+             config['password_store'].get_decrypted_password(password)
+ 
+         grep = subprocess.Popen(
+-            ['grep', '-e', search_string],
++            ['@grep_exec@', '-e', search_string],
+             stdout=subprocess.PIPE,
+             stdin=subprocess.PIPE
+         )
+@@ -397,7 +397,7 @@ def git(config, commands):
+     else:
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % config['password_store'].git_dir,
+                 '--work-tree=%s' % config['password_store'].path,
+             ] + command_list,
+diff --git a/pypass/passwordstore.py b/pypass/passwordstore.py
+index 9de0376..8cf20a4 100644
+--- a/pypass/passwordstore.py
++++ b/pypass/passwordstore.py
+@@ -26,18 +26,7 @@ import re
+ from .entry_type import EntryType
+ 
+ # Find the right gpg binary
+-if subprocess.call(
+-        ['which', 'gpg2'],
+-        stdout=subprocess.PIPE,
+-        stderr=subprocess.PIPE) == 0:
+-    GPG_BIN = 'gpg2'
+-elif subprocess.call(
+-        ['which', 'gpg'],
+-        stdout=subprocess.PIPE,
+-        stderr=subprocess.PIPE) == 0:
+-    GPG_BIN = 'gpg'
+-else:
+-    raise Exception("Could not find GPG")
++GPG_BIN = '@gpg_exec@'
+ 
+ 
+ class PasswordStore(object):
+@@ -215,7 +204,7 @@ class PasswordStore(object):
+             # Init git repo
+             subprocess.call(
+                 [
+-                    "git",
++                    "@git_exec@",
+                     "--git-dir=%s" % git_dir,
+                     "--work-tree=%s" % git_work_tree,
+                     "init", path
+@@ -226,7 +215,7 @@ class PasswordStore(object):
+             # Add remote repo
+             subprocess.call(
+                 [
+-                    "git",
++                    "@git_exec@",
+                     "--git-dir=%s" % git_dir,
+                     "--work-tree=%s" % git_work_tree,
+                     "remote",
+@@ -241,7 +230,7 @@ class PasswordStore(object):
+             # TODO: add parameters for remote and branch ?
+             subprocess.call(
+                 [
+-                    "git",
++                    "@git_exec@",
+                     "--git-dir=%s" % git_dir,
+                     "--work-tree=%s" % git_work_tree,
+                     "pull",
+@@ -272,7 +261,7 @@ class PasswordStore(object):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 "--git-dir=%s" % self.git_dir,
+                 "--work-tree=%s" % self.path,
+                 'init',
+@@ -298,7 +287,7 @@ class PasswordStore(object):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 "--git-dir=%s" % self.git_dir,
+                 "--work-tree=%s" % self.path,
+                 'config',
+@@ -311,7 +300,7 @@ class PasswordStore(object):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 "--git-dir=%s" % self.git_dir,
+                 "--work-tree=%s" % self.path,
+                 'config',
+@@ -326,7 +315,7 @@ class PasswordStore(object):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 "--git-dir=%s" % self.git_dir,
+                 "--work-tree=%s" % self.path,
+                 'add',
+@@ -338,7 +327,7 @@ class PasswordStore(object):
+         if message:
+             subprocess.call(
+                 [
+-                    'git',
++                    '@git_exec@',
+                     "--git-dir=%s" % self.git_dir,
+                     "--work-tree=%s" % self.path,
+                     'commit',
+@@ -350,7 +339,7 @@ class PasswordStore(object):
+         else:
+             subprocess.call(
+                 [
+-                    'git',
++                    '@git_exec@',
+                     "--git-dir=%s" % self.git_dir,
+                     "--work-tree=%s" % self.path,
+                     'commit'
+diff --git a/pypass/tests/test_command.py b/pypass/tests/test_command.py
+index 4966b34..960a8ed 100644
+--- a/pypass/tests/test_command.py
++++ b/pypass/tests/test_command.py
+@@ -127,7 +127,7 @@ class TestCommand(unittest.TestCase):
+ 
+         # Check if the password is in the clipoard
+         xclip = subprocess.Popen(
+-            ['xclip', '-o', '-selection', 'clipboard'],
++            ['@xclip_exec@', '-o', '-selection', 'clipboard'],
+             stdout=subprocess.PIPE)
+         xclip.wait()
+         self.assertEqual(xclip.stdout.read().decode('utf8'), 'clipme999')
+@@ -301,7 +301,7 @@ class TestCommand(unittest.TestCase):
+         # git init should set diff.gpg.binary to True
+         diff_gpg_binary = subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % os.path.join(self.dir, '.git'),
+                 '--work-tree=%s' % self.dir,
+                 'config',
+@@ -317,7 +317,7 @@ class TestCommand(unittest.TestCase):
+         # git init should set diff.gpg.textconv to 'gpg -d'
+         gpg = subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % os.path.join(self.dir, '.git'),
+                 '--work-tree=%s' % self.dir,
+                 'config',
+@@ -337,7 +337,7 @@ class TestCommand(unittest.TestCase):
+ 
+         subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % origin_git_dir,
+                 '--work-tree=%s' % origin_dir,
+                 'init',
+@@ -350,7 +350,7 @@ class TestCommand(unittest.TestCase):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % origin_git_dir,
+                 '--work-tree=%s' % origin_dir,
+                 'add', 'test_git_init_clone.gpg',
+@@ -359,7 +359,7 @@ class TestCommand(unittest.TestCase):
+ 
+         subprocess.call(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % origin_git_dir,
+                 '--work-tree=%s' % origin_dir,
+                 'commit',
+diff --git a/pypass/tests/test_passwordstore.py b/pypass/tests/test_passwordstore.py
+index 6decc5f..ceb5181 100644
+--- a/pypass/tests/test_passwordstore.py
++++ b/pypass/tests/test_passwordstore.py
+@@ -171,7 +171,7 @@ class TestPasswordStore(unittest.TestCase):
+ 
+         subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % os.path.join(origin_dir, '.git'),
+                 '--work-tree=%s' % origin_dir,
+                 'init',
+@@ -184,7 +184,7 @@ class TestPasswordStore(unittest.TestCase):
+ 
+         subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % os.path.join(origin_dir, '.git'),
+                 '--work-tree=%s' % origin_dir,
+                 'add', 'test_git_init_clone.gpg',
+@@ -193,7 +193,7 @@ class TestPasswordStore(unittest.TestCase):
+ 
+         subprocess.Popen(
+             [
+-                'git',
++                '@git_exec@',
+                 '--git-dir=%s' % os.path.join(origin_dir, '.git'),
+                 '--work-tree=%s' % origin_dir,
+                 'commit',

pkgs/development/python-modules/pyphen/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "Pyphen";
-  version = "0.9.5";
+  version = "0.10.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3b633a50873156d777e1f1075ba4d8e96a6ad0a3ca42aa3ea9a6259f93f18921";
+    sha256 = "719b21dfb4b04fbc11cc0f6112418535fe35474021120cccfffc43a25fe63128";
   };
 
   meta = with stdenv.lib; {

pkgs/development/python-modules/pyscard/default.nix

@@ -9,12 +9,12 @@ let
 in
 
 buildPythonPackage rec {
-  version = "1.9.9";
+  version = "2.0.0";
   pname = "pyscard";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "082cjkbxadaz2jb4rbhr0mkrirzlqyqhcf3r823qb0q1k50ybgg6";
+    sha256 = "0yap0p8mp6dx58n3nina6ryhc2cysaj75sq98wf3qybf33cxjr5k";
   };
 
   postPatch = if withApplePCSC then ''

pkgs/development/python-modules/pytest/default.nix

@@ -21,14 +21,14 @@
 }:
 
 buildPythonPackage rec {
-  version = "6.1.1";
+  version = "6.1.2";
   pname = "pytest";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8f593023c1a0f916110285b6efd7f99db07d59546e3d8c36fc60e2ab05d3be92";
+    sha256 = "c0a7e94a8cdbc5422a51ccdad8e6f1024795939cc89159a0ae7f0b316ad3823e";
   };
 
   checkInputs = [ hypothesis pygments ];

pkgs/development/python-modules/rq/default.nix

@@ -2,14 +2,14 @@
 
 buildPythonPackage rec {
   pname = "rq";
-  version = "1.5.1";
+  version = "1.5.2";
   disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "rq";
     repo = "rq";
     rev = "v${version}";
-    sha256 = "0i7yyw828wdvl7ap4gb7jhm4p94502is3xxrgrdgwwp0l1rac004";
+    sha256 = "0ikqmpq0g1qiqwd7ar1286l4hqjb6aj2wr844gihhb8ijzwhp8va";
   };
 
   # test require a running redis rerver, which is something we can't do yet

pkgs/development/python-modules/setuptools-rust/default.nix

@@ -1,6 +1,7 @@
 { stdenv
 , buildPythonPackage
 , fetchPypi
+, isPy27
 , semantic-version
 , setuptools
 , setuptools_scm
@@ -9,11 +10,13 @@
 
 buildPythonPackage rec {
   pname = "setuptools-rust";
-  version = "0.11.3";
+  version = "0.11.4";
+
+  disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1p21sw77197m7pciy8g25bwwaakq1675h0x1lis9sypzr46p2s11";
+    sha256 = "9714fcb94c78e6ab1864ddac7750049e105fd4f7c52103aecf40d408e94a722f";
   };
 
   nativeBuildInputs = [ setuptools_scm ];

pkgs/development/python-modules/sh/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "sh";
-  version = "1.14.0";
+  version = "1.14.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "05c7e520cdf70f70a7228a03b589da9f96c6e0d06fc487ab21fc62b26a592e59";
+    sha256 = "39aa9af22f6558a0c5d132881cf43e34828ca03e4ae11114852ca6a55c7c1d8e";
   };
 
   patches = [

pkgs/development/python-modules/smbus-cffi/default.nix

@@ -0,0 +1,46 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, cffi
+, pytestCheckHook
+, pyserial
+, fetchpatch
+}:
+
+buildPythonPackage rec {
+  pname = "smbus-cffi";
+  version = "0.5.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "fb4195aaabfc01586863f60d3190b5cb1bf8f12622fd597e23e48768dad6bde8";
+  };
+
+  patches = [
+    # https://github.com/bivab/smbus-cffi/pull/24
+    (fetchpatch {
+      url = "https://github.com/bivab/smbus-cffi/commit/ba79ae174a9d84e767d95f165c43ee212b1bbb92.patch";
+      sha256 = "sha256-WtRuK5y6fWDEhm0Xy5XqS5yCkn7vXXYtjlOjS90gla4=";
+    })
+  ];
+
+  propagatedBuildInputs = [ cffi ];
+
+  installCheckPhase = ''
+    # we want to import the installed module that also contains the compiled library
+    rm -rf smbus
+    runHook pytestCheckPhase
+  '';
+
+  # requires hardware access
+  pytestFlagsArray = [ "--ignore=test/test_smbus_integration.py" ];
+
+  checkInputs = [ pytestCheckHook pyserial ];
+
+  meta = with lib; {
+    description = "Python module for SMBus access through Linux I2C /dev interface";
+    homepage = "https://github.com/bivab/smbus-cffi";
+    license = licenses.gpl2;
+    maintainers = with maintainers; [ mic92 ];
+  };
+}

pkgs/development/python-modules/sqlite-utils/default.nix

@@ -0,0 +1,42 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, isPy3k
+, click
+, click-default-group
+, tabulate
+, pytestCheckHook
+, pytestrunner
+, black
+}:
+
+buildPythonPackage rec {
+  pname = "sqlite-utils";
+  version = "2.22";
+  disabled = !isPy3k;
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0g8zzp4qw6miijirykjcd78ib027k7dmg6lb9m4xysvah5jh8vfv";
+  };
+
+  propagatedBuildInputs = [
+    click
+    click-default-group
+    tabulate
+  ];
+
+  checkInputs = [
+    pytestCheckHook
+    pytestrunner
+    black
+  ];
+
+  meta = with lib; {
+    description = "Python CLI utility and library for manipulating SQLite databases";
+    homepage = "https://github.com/simonw/sqlite-utils";
+    license = licenses.asl20;
+    maintainers = [ maintainers.meatcar ];
+  };
+
+}

pkgs/development/python-modules/thinc/default.nix

@@ -23,11 +23,11 @@
 
 buildPythonPackage rec {
   pname = "thinc";
-  version = "7.4.1";
+  version = "7.4.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "17lampllwq50yjl2djs9bs5rp29xw55gqj762npqi3cvvj2glf81";
+    sha256 = "772f1a27b9b31e51003d1d2a7476cc49cc81044dd87088112237f93bd2091f0b";
   };
 
   buildInputs = lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [

pkgs/development/python-modules/user-agents/default.nix

@@ -2,14 +2,14 @@
 
 buildPythonPackage rec {
   pname = "user-agents";
-  version = "2.1.0";
+  version = "2.2.0";
 
   # PyPI is missing devices.json
   src = fetchFromGitHub {
     owner = "selwin";
     repo = "python-user-agents";
     rev = "v${version}";
-    sha256 = "04bndajsfnpymxfiggnj7g38cmlvca3ry5k2611x8ibp38x53yhc";
+    sha256 = "0pcbjqj21c2ixhl414bh2h8khi8y1igzfpkyqwan1pakix0lq45a";
   };
 
   propagatedBuildInputs = [ ua-parser ];