Merge staging-next into master

doc/stdenv.xml

@@ -2525,6 +2525,23 @@ addEnvHooks "$hostOffset" myBashFunction
       </para>
      </listitem>
     </varlistentry>
+    <varlistentry>
+     <term>
+      libiconv, libintl
+     </term>
+     <listitem>
+       <para>
+	 A few libraries automatically add to
+	 <literal>NIX_LDFLAGS</literal> their library, making their
+	 symbols automatically available to the linker. This includes
+	 libiconv and libintl (gettext). This is done to provide
+	 compatibility between GNU Linux, where libiconv and libintl
+	 are bundled in, and other systems where that might not be the
+	 case. Sometimes, this behavior is not desired. To disable
+	 this behavior, set <literal>dontAddExtraLibs</literal>.
+       </para>
+     </listitem>
+    </varlistentry>
     <varlistentry>
      <term>
       cmake

pkgs/build-support/setup-hooks/audit-tmpdir.sh

@@ -20,13 +20,13 @@ auditTmpdir() {
         if [[ "$i" =~ .build-id ]]; then continue; fi
 
         if isELF "$i"; then
-            if patchelf --print-rpath "$i" | grep -q -F "$TMPDIR/"; then
+            if { printf :; patchelf --print-rpath "$i"; } | grep -q -F ":$TMPDIR/"; then
                 echo "RPATH of binary $i contains a forbidden reference to $TMPDIR/"
                 exit 1
             fi
         fi
 
-        if  isScript "$i"; then
+        if isScript "$i"; then
             if [ -e "$(dirname "$i")/.$(basename "$i")-wrapped" ]; then
                 if grep -q -F "$TMPDIR/" "$i"; then
                     echo "wrapper script $i contains a forbidden reference to $TMPDIR/"

pkgs/data/misc/tzdata/default.nix

@@ -2,16 +2,16 @@
 
 stdenv.mkDerivation rec {
   name = "tzdata-${version}";
-  version = "2018e";
+  version = "2018g";
 
   srcs =
     [ (fetchurl {
-        url = "http://www.iana.org/time-zones/repository/releases/tzdata${version}.tar.gz";
+        url = "https://data.iana.org/time-zones/releases/tzdata${version}.tar.gz";
-        sha256 = "0bk97fv2i5ns42prpmlaadsswdjwv0ifi7whj2s4q6l44rcqwa3b";
+        sha256 = "05kayi3w9pvhj6ljx1hvwd0r8mxfzn436fjmwhx53xkj919xxpq2";
       })
       (fetchurl {
-        url = "http://www.iana.org/time-zones/repository/releases/tzcode${version}.tar.gz";
+        url = "https://data.iana.org/time-zones/releases/tzcode${version}.tar.gz";
-        sha256 = "1kpb02631s58i068mwq63xlamcv1ffj4p6y4wpb9kdl01vr0qd6a";
+        sha256 = "09y44fzcdq3c06saa8iqqa0a59cyw6ni3p31ps0j1w3hcpxz8lxa";
       })
     ];
 

pkgs/development/compilers/ghc/8.2.2.nix

@@ -206,6 +206,9 @@ stdenv.mkDerivation (rec {
     "--disable-large-address-space"
   ];
 
+  # Don’t add -liconv to LDFLAGS automatically so that GHC will add it itself.
+  dontAddExtraLibs = true;
+
   # Make sure we never relax`$PATH` and hooks support for compatability.
   strictDeps = true;
 

pkgs/development/compilers/ghc/8.4.4.nix

@@ -186,6 +186,9 @@ stdenv.mkDerivation (rec {
   # Make sure we never relax`$PATH` and hooks support for compatability.
   strictDeps = true;
 
+  # Don’t add -liconv to LDFLAGS automatically so that GHC will add it itself.
+  dontAddExtraLibs = true;
+
   nativeBuildInputs = [
     perl autoconf automake m4 python3 sphinx
     ghc bootPkgs.alex bootPkgs.happy bootPkgs.hscolour

pkgs/development/compilers/ghc/8.6.1.nix

@@ -167,6 +167,9 @@ stdenv.mkDerivation (rec {
   # Make sure we never relax`$PATH` and hooks support for compatability.
   strictDeps = true;
 
+  # Don’t add -liconv to LDFLAGS automatically so that GHC will add it itself.
+  dontAddExtraLibs = true;
+
   nativeBuildInputs = [
     perl autoconf automake m4 python3 sphinx
     ghc bootPkgs.alex bootPkgs.happy bootPkgs.hscolour

pkgs/development/compilers/ghc/8.6.2.nix

@@ -167,6 +167,9 @@ stdenv.mkDerivation (rec {
   # Make sure we never relax`$PATH` and hooks support for compatability.
   strictDeps = true;
 
+  # Don’t add -liconv to LDFLAGS automatically so that GHC will add it itself.
+  dontAddExtraLibs = true;
+
   nativeBuildInputs = [
     perl autoconf automake m4 python3 sphinx
     ghc bootPkgs.alex bootPkgs.happy bootPkgs.hscolour

pkgs/development/compilers/ghc/head.nix

@@ -149,6 +149,9 @@ stdenv.mkDerivation (rec {
   # Make sure we never relax`$PATH` and hooks support for compatability.
   strictDeps = true;
 
+  # Don’t add -liconv to LDFLAGS automatically so that GHC will add it itself.
+  dontAddExtraLibs = true;
+
   nativeBuildInputs = [
     perl autoconf automake m4 python3
     ghc bootPkgs.alex bootPkgs.happy bootPkgs.hscolour

pkgs/development/compilers/rust/bootstrap.nix

@@ -3,16 +3,16 @@
 let
   # Note: the version MUST be one version prior to the version we're
   # building
-  version = "1.30.0";
+  version = "1.30.1";
 
   # fetch hashes by running `print-hashes.sh 1.30.0`
   hashes = {
-    i686-unknown-linux-gnu = "4ceb0e3011d96504587abb7edfdea9c1b4b7cb2c4488cc4a25adc2f3b6a88b21";
+    i686-unknown-linux-gnu = "c61655977fb16decf0ceb76043b9ae2190927aa9cc24f013d444384dcab99bbf";
-    x86_64-unknown-linux-gnu = "f620e3125cc505c842150bd873c0603432b6cee984cdae8b226cf92c8aa1a80f";
+    x86_64-unknown-linux-gnu = "a01a493ed8946fc1c15f63e74fc53299b26ebf705938b4d04a388a746dfdbf9e";
-    armv7-unknown-linux-gnueabihf = "63991f6769ca8db693562c34ac25473e9d4f9f214d6ee98917891be469d69cfd";
+    armv7-unknown-linux-gnueabihf = "9b3b6df02a2a92757e4993a7357fdd02e07b60101a748b4618e6ae1b90bc1b6b";
-    aarch64-unknown-linux-gnu = "9690c7c50eba5a8461184ee4138b4c284bad31ccc4aa1f2ddeec58b253e6363e";
+    aarch64-unknown-linux-gnu = "6d87d81561285abd6c1987e07b60b2d723936f037c4b46eedcc12e8566fd3874";
-    i686-apple-darwin = "b8e5ac31f0a192a58b0e98ff88c47035a2882598946352fa5a86c28ede079230";
+    i686-apple-darwin = "a7c14b18e96406d9f43d69d0f984b2fa6f92cc7b7b37e2bb7b70b6f44b02b083";
-    x86_64-apple-darwin = "07008d90932712282bc599f1e9a226e97879c758dc1f935e6e2675e45694cc1b";
+    x86_64-apple-darwin = "3ba1704a7defe3d9a6f0c1f68792c084da83bcba85e936d597bac0c019914b94";
   };
 
   platform =

pkgs/development/compilers/rust/default.nix

@@ -7,11 +7,11 @@
 
 let
   rustPlatform = recurseIntoAttrs (makeRustPlatform (callPackage ./bootstrap.nix {}));
-  version = "1.30.1";
+  version = "1.31.0";
-  cargoVersion = "1.30.0";
+  cargoVersion = "1.31.0";
   src = fetchurl {
     url = "https://static.rust-lang.org/dist/rustc-${version}-src.tar.gz";
-    sha256 = "0aavdc1lqv0cjzbqwl5n59yd0bqdlhn0zas61ljf38yrvc18k8rn";
+    sha256 = "01pg2619bwjnhjbphryrbkwaz0lw8cfffm4xlz35znzipb04vmcs";
   };
 in rec {
   rustc = callPackage ./rustc.nix {

pkgs/development/libraries/dbus/default.nix

@@ -6,8 +6,8 @@ assert x11Support -> libX11 != null
                   && libSM != null;
 
 let
-  version = "1.12.10";
+  version = "1.12.12";
-  sha256 = "1xywijmgfad4m3cxp0b4l6kvypwc53ckmhwwzbrc6n32jwj3ssab";
+  sha256 = "1y7mxhkw2shd9mi9s62k81lz8npjkrafapr4fyfms7hs04kg4ilm";
 
 self = stdenv.mkDerivation {
     name = "dbus-${version}";

pkgs/development/libraries/gettext/gettext-setup-hook.sh

@@ -10,7 +10,7 @@ addEnvHooks "$hostOffset" gettextDataDirsHook
 
 # libintl must be listed in load flags on non-Glibc
 # it doesn't hurt to have it in Glibc either though
-if [ ! -z "@gettextNeedsLdflags@" ]; then
+if [ -n "@gettextNeedsLdflags@" -a -z "$dontAddExtraLibs" ]; then
     # See pkgs/build-support/setup-hooks/role.bash
     getHostRole
     export NIX_${role_pre}LDFLAGS+=" -lintl"

pkgs/development/libraries/jemalloc/common.nix

@@ -1,11 +1,15 @@
 { version, sha256 }:
-{ stdenv, fetchurl,
+{ stdenv, fetchurl
 # By default, jemalloc puts a je_ prefix onto all its symbols on OSX, which
 # then stops downstream builds (mariadb in particular) from detecting it. This
 # option should remove the prefix and give us a working jemalloc.
 # Causes segfaults with some software (ex. rustc), but defaults to true for backward
 # compatibility. Ignored on non OSX.
-stripPrefix ? true }:
+, stripPrefix ? true
+, disableInitExecTls ? false
+}:
+
+with stdenv.lib;
 
 stdenv.mkDerivation rec {
   name = "jemalloc-${version}";
@@ -17,7 +21,11 @@ stdenv.mkDerivation rec {
   };
 
   # see the comment on stripPrefix
-  configureFlags = stdenv.lib.optional (stdenv.isDarwin && stripPrefix) "--with-jemalloc-prefix=";
+  configureFlags = []
+    ++ optional (stdenv.isDarwin && stripPrefix) [ "--with-jemalloc-prefix=" ]
+    ++ optional disableInitExecTls [ "--disable-initial-exec-tls" ]
+  ;
+
   doCheck = true;
 
   enableParallelBuilding = true;

pkgs/development/libraries/libiconv/setup-hook.sh

@@ -2,5 +2,7 @@
 # it doesn't hurt to have it in Glibc either though
 
 # See pkgs/build-support/setup-hooks/role.bash
-getHostRole
+if [ -z "$dontAddExtraLibs" ]; then
-export NIX_${role_pre}LDFLAGS+=" -liconv"
+    getHostRole
+    export NIX_${role_pre}LDFLAGS+=" -liconv"
+fi

pkgs/development/libraries/libmicrohttpd/default.nix

@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   name = "libmicrohttpd-${version}";
-  version = "0.9.60";
+  version = "0.9.61";
 
   src = fetchurl {
     url = "mirror://gnu/libmicrohttpd/${name}.tar.gz";
-    sha256 = "0wf457bqbdvx53clk4dg2620p83vk4757l7lrpvmxrd9jlzms3nd";
+    sha256 = "0dfl96l5wxqmswdqsdxqisflvm0padk9rikxyrhrx9rhm6s6ki6v";
   };
 
   outputs = [ "out" "dev" "devdoc" "info" ];

pkgs/development/libraries/libnftnl/default.nix

@@ -1,12 +1,12 @@
 { stdenv, fetchurl, pkgconfig, libmnl }:
 
 stdenv.mkDerivation rec {
-  version = "1.1.1";
+  version = "1.1.2";
   name = "libnftnl-${version}";
 
   src = fetchurl {
     url = "https://netfilter.org/projects/libnftnl/files/${name}.tar.bz2";
-    sha256 = "1wmgjfcb35mscb2srzia5931srygywrs1aznxmg67v177x0nasjx";
+    sha256 = "0pffmsv41alsn5ac7mwnb9fh3qpwzqk13jrzn6c5i71wq6kbgix5";
   };
 
   nativeBuildInputs = [ pkgconfig ];

pkgs/development/libraries/libpcap/default.nix

@@ -1,11 +1,11 @@
-{ stdenv, fetchurl, fetchpatch, flex, bison }:
+{ stdenv, fetchurl, flex, bison }:
 
 stdenv.mkDerivation rec {
-  name = "libpcap-1.8.1";
+  name = "libpcap-1.9.0";
 
   src = fetchurl {
     url = "https://www.tcpdump.org/release/${name}.tar.gz";
-    sha256 = "07jlhc66z76dipj4j5v3dig8x6h3k6cb36kmnmpsixf3zmlvqgb7";
+    sha256 = "06bhydl4vr4z9c3vahl76f2j96z1fbrcl7wwismgs4sris08inrf";
   };
 
   nativeBuildInputs = [ flex bison ];
@@ -27,26 +27,10 @@ stdenv.mkDerivation rec {
     substituteInPlace configure --replace " -arch i386" ""
   '';
 
-  patches = [
-    (fetchpatch {
-      url    = "https://sources.debian.net/data/main/libp/libpcap/1.8.1-3/debian/patches/disable-remote.diff";
-      sha256 = "0dvjax9c0spvq8cdjnkbnm65wlzaml259yragf95kzg611vszfmj";
-    })
-    # See https://github.com/wjt/bustle/commit/f62cf6bfa662af4ae39effbbd4891bc619e3b4e9
-    (fetchpatch {
-      url    = "https://github.com/the-tcpdump-group/libpcap/commit/2be9c29d45fb1fab8e9549342a30c160b7dea3e1.patch";
-      sha256 = "1g8mh942vr0abn48g0bdvi4gmhq1bz0l80276603y7064qhy3wq5";
-    })
-    (fetchpatch {
-      url    = "https://github.com/the-tcpdump-group/libpcap/commit/1a6b088a88886eac782008f37a7219a32b86da45.patch";
-      sha256 = "1n5ylm7ch3i1lh4y2q16b0vabgym8g8mqiqxpqcdkjdn05c1wflr";
-    })
-  ];
-
   preInstall = ''mkdir -p $out/bin'';
 
   meta = with stdenv.lib; {
-    homepage = http://www.tcpdump.org;
+    homepage = https://www.tcpdump.org;
     description = "Packet Capture Library";
     platforms = platforms.unix;
     maintainers = with maintainers; [ fpletz ];

pkgs/development/libraries/pcre2/default.nix

@@ -2,10 +2,10 @@
 
 stdenv.mkDerivation rec {
   name = "pcre2-${version}";
-  version = "10.31";
+  version = "10.32";
   src = fetchurl {
     url = "https://ftp.pcre.org/pub/pcre/${name}.tar.bz2";
-    sha256 = "1b389pzw91k1hzydsh4smdsxyppwz4pv74m3nrvy8rda0j3m6zg0";
+    sha256 = "0bkwp2czcckvvbdls7b331cad11rxsm020aqhrbz84z8bp68k7pj";
   };
 
   configureFlags = [

pkgs/development/libraries/polkit/default.nix

@@ -20,6 +20,14 @@ stdenv.mkDerivation rec {
     sha256 = "0c91y61y4gy6p91cwbzg32dhavw4b7fflg370rimqhdxpzdfr1rg";
   };
 
+  patches = [
+    # CVE-2018-19788 - high UID fixup
+    (fetchpatch {
+      url = "https://gitlab.freedesktop.org/polkit/polkit/commit/5230646dc6876ef6e27f57926b1bad348f636147.patch";
+      name = "CVE-2018-19788.patch";
+      sha256 = "1y3az4mlxx8k1zcss5qm7k102s7k1kqgcfnf11j9678fh7p008vp";
+    })
+  ];
 
   postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
     sed -i -e "s/-Wl,--as-needed//" configure.ac

pkgs/development/libraries/science/math/openblas/default.nix

@@ -79,12 +79,12 @@ let
 in
 stdenv.mkDerivation rec {
   name = "openblas-${version}";
-  version = "0.3.3";
+  version = "0.3.4";
   src = fetchFromGitHub {
     owner = "xianyi";
     repo = "OpenBLAS";
     rev = "v${version}";
-    sha256 = "0cpkvfvc14xm9mifrm919rp8vrq70gpl7r2sww4f0izrl39wklwx";
+    sha256 = "1jdq4msfyg13pdmwwfqpixf4fshss68qzls820lmn0i6y7h4aix3";
   };
 
   inherit blas64;

pkgs/development/libraries/wayland/protocols.nix

@@ -4,11 +4,11 @@
 
 stdenv.mkDerivation rec {
   name = "wayland-protocols-${version}";
-  version = "1.16";
+  version = "1.17";
 
   src = fetchurl {
     url = "https://wayland.freedesktop.org/releases/${name}.tar.xz";
-    sha256 = "1icqikvhgv9kcf8lcqml3w9fb8q3igr4c3471jb6mlyw3yaqa53b";
+    sha256 = "0bw1sqixqk2a7mqw630cs4dlgcp5yib90vyikzm3lr05jz7ij4yz";
   };
 
   nativeBuildInputs = [ pkgconfig ];

pkgs/development/python-modules/Cython/default.nix

@@ -26,11 +26,11 @@ let
 
 in buildPythonPackage rec {
   pname = "Cython";
-  version = "0.29";
+  version = "0.29.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "15zama7fgp7yyi3z39xp3z2lvwcgch8fn3ycscw2cs37vqg6v4cl";
+    sha256 = "15zv9c4ami9hzya28wz1shqljbbk5sxdvqbjxqnf15ssk137daqq";
   };
 
   nativeBuildInputs = [

pkgs/development/python-modules/Flask-PyMongo/default.nix

@@ -13,7 +13,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0yi1r13p3l1d5dpdfnyp239l6l17nwvyky8y62nmmqxlsp2ja9hi";
+    sha256 = "112625c5d5b4e35aad301ef9e937b7275043d310d75bd76e2b2dd07147c8217a";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/Nikola/default.nix

@@ -2,6 +2,7 @@
 , buildPythonPackage
 , isPy3k
 , fetchPypi
+, fetchpatch
 , doit
 , glibcLocales
 , pytest
@@ -54,6 +55,11 @@ buildPythonPackage rec {
     sha256 = "18bq68f9v7xk9ahjl6x4k77yysq5g6g07ng2ndbg35kcsdnw4nk6";
   };
 
+  patches = fetchpatch {
+    url = https://github.com/getnikola/nikola/commit/d40be74a86af71b5206dc22beb82fcd0d08ea2f6.patch;
+    sha256 = "0disr8bxbfjymwlbm82mxkal3ynnv8zfiqsgfh9fkqhb35bn4l8j";
+  };
+
   checkPhase = ''
     LANG="en_US.UTF-8" LC_ALL="en_US.UTF-8" py.test .
   '';

pkgs/development/python-modules/Wand/default.nix

@@ -1,5 +1,4 @@
 { stdenv
-, lib
 , buildPythonPackage
 , fetchPypi
 , imagemagick
@@ -15,33 +14,30 @@ let
   imagemagick_library = "${imagemagick}/lib/libMagickCore-6.Q16${soext}";
 in buildPythonPackage rec {
   pname = "Wand";
-  version = "0.4.4";
+  version = "0.4.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "28e0454c9d16d69c5d5034918d96320d8f9f1377b4fdaf4944eec2f938c74704";
+    sha256 = "b40a2215545e8c7193b3fccd6e7251dc556ec9b878a4f67d992b056ff396bc65";
   };
 
   checkInputs = [ pytest pytest_xdist memory_profiler psutil ];
 
   buildInputs = [ imagemagick ];
 
-  patches = [
-    ./libraries.patch
-  ];
-
   inherit magick_wand_library imagemagick_library;
 
   postPatch = ''
     substituteAllInPlace wand/api.py
   '';
 
-  # No tests
+  # tests not included with pypi release
   doCheck = false;
-  meta = {
+
+  meta = with stdenv.lib; {
     description = "Ctypes-based simple MagickWand API binding for Python";
     homepage = http://wand-py.org/;
-    license = with lib.licenses; [ mit ];
+    license = [ licenses.mit ];
   };
 
   passthru = {

pkgs/development/python-modules/Wand/libraries.patch

@@ -1,149 +0,0 @@
-diff --git a/wand/api.py b/wand/api.py
-index 2c18513..1a1b511 100644
---- a/wand/api.py
-+++ b/wand/api.py
-@@ -43,98 +43,6 @@ class c_magick_char_p(ctypes.c_char_p):
-         """
-         library.MagickRelinquishMemory(self)
- 
--
--def library_paths():
--    """Iterates for library paths to try loading.  The result paths are not
--    guaranteed that they exist.
--
--    :returns: a pair of libwand and libmagick paths.  they can be the same.
--              path can be ``None`` as well
--    :rtype: :class:`tuple`
--
--    """
--    libwand = None
--    libmagick = None
--    versions = '', '-6', '-Q16', '-Q8', '-6.Q16'
--    options = '', 'HDRI', 'HDRI-2'
--    system = platform.system()
--    magick_home = os.environ.get('MAGICK_HOME')
--
--    if system == 'Windows':
--        # ImageMagick installers normally install coder and filter DLLs in
--        # subfolders, we need to add those folders to PATH, otherwise loading
--        # the DLL later will fail.
--        try:
--            with winreg.OpenKey(winreg.HKEY_LOCAL_MACHINE,
--                                r"SOFTWARE\ImageMagick\Current") as reg_key:
--                libPath = winreg.QueryValueEx(reg_key, "LibPath")
--                coderPath = winreg.QueryValueEx(reg_key, "CoderModulesPath")
--                filterPath = winreg.QueryValueEx(reg_key, "FilterModulesPath")
--                magick_home = libPath[0]
--                os.environ['PATH'] += (';' + libPath[0] + ";" +
--                                       coderPath[0] + ";" + filterPath[0])
--        except OSError:
--            # otherwise use MAGICK_HOME, and we assume the coder and
--            # filter DLLs are in the same directory
--            pass
--
--    def magick_path(path):
--        return os.path.join(magick_home, *path)
--    combinations = itertools.product(versions, options)
--    for suffix in (version + option for version, option in combinations):
--        # On Windows, the API is split between two libs. On other platforms,
--        # it's all contained in one.
--        if magick_home:
--            if system == 'Windows':
--                libwand = 'CORE_RL_wand_{0}.dll'.format(suffix),
--                libmagick = 'CORE_RL_magick_{0}.dll'.format(suffix),
--                yield magick_path(libwand), magick_path(libmagick)
--                libwand = 'libMagickWand{0}.dll'.format(suffix),
--                libmagick = 'libMagickCore{0}.dll'.format(suffix),
--                yield magick_path(libwand), magick_path(libmagick)
--            elif system == 'Darwin':
--                libwand = 'lib', 'libMagickWand{0}.dylib'.format(suffix),
--                yield magick_path(libwand), magick_path(libwand)
--            else:
--                libwand = 'lib', 'libMagickWand{0}.so'.format(suffix),
--                yield magick_path(libwand), magick_path(libwand)
--        if system == 'Windows':
--            libwand = ctypes.util.find_library('CORE_RL_wand_' + suffix)
--            libmagick = ctypes.util.find_library('CORE_RL_magick_' + suffix)
--            yield libwand, libmagick
--            libwand = ctypes.util.find_library('libMagickWand' + suffix)
--            libmagick = ctypes.util.find_library('libMagickCore' + suffix)
--            yield libwand, libmagick
--        else:
--            libwand = ctypes.util.find_library('MagickWand' + suffix)
--            yield libwand, libwand
--
--
--def load_library():
--    """Loads the MagickWand library.
--
--    :returns: the MagickWand library and the ImageMagick library
--    :rtype: :class:`ctypes.CDLL`
--
--    """
--    tried_paths = []
--    for libwand_path, libmagick_path in library_paths():
--        if libwand_path is None or libmagick_path is None:
--            continue
--        try:
--            tried_paths.append(libwand_path)
--            libwand = ctypes.CDLL(libwand_path)
--            if libwand_path == libmagick_path:
--                libmagick = libwand
--            else:
--                tried_paths.append(libmagick_path)
--                libmagick = ctypes.CDLL(libmagick_path)
--        except (IOError, OSError):
--            continue
--        return libwand, libmagick
--    raise IOError('cannot find library; tried paths: ' + repr(tried_paths))
--
--
- if not hasattr(ctypes, 'c_ssize_t'):
-     if ctypes.sizeof(ctypes.c_uint) == ctypes.sizeof(ctypes.c_void_p):
-         ctypes.c_ssize_t = ctypes.c_int
-@@ -176,43 +84,14 @@ class AffineMatrix(ctypes.Structure):
- # Preserve the module itself even if it fails to import
- sys.modules['wand._api'] = sys.modules['wand.api']
- 
--try:
--    libraries = load_library()
--except (OSError, IOError):
--    msg = 'http://docs.wand-py.org/en/latest/guide/install.html'
--    if sys.platform.startswith(('dragonfly', 'freebsd')):
--        msg = 'pkg install'
--    elif sys.platform == 'win32':
--        msg += '#install-imagemagick-on-windows'
--    elif sys.platform == 'darwin':
--        mac_pkgmgrs = {'brew': 'brew install freetype imagemagick',
--                       'port': 'port install imagemagick'}
--        for pkgmgr in mac_pkgmgrs:
--            with os.popen('which ' + pkgmgr) as f:
--                if f.read().strip():
--                    msg = mac_pkgmgrs[pkgmgr]
--                    break
--        else:
--            msg += '#install-imagemagick-on-mac'
--    else:
--        distname, _, __ = platform.linux_distribution()
--        distname = (distname or '').lower()
--        if distname in ('debian', 'ubuntu'):
--            msg = 'apt-get install libmagickwand-dev'
--        elif distname in ('fedora', 'centos', 'redhat'):
--            msg = 'yum install ImageMagick-devel'
--    raise ImportError('MagickWand shared library not found.\n'
--                      'You probably had not installed ImageMagick library.\n'
--                      'Try to install:\n  ' + msg)
--
- #: (:class:`ctypes.CDLL`) The MagickWand library.
--library = libraries[0]
-+library = ctypes.CDLL("@magick_wand_library@")
- 
- #: (:class:`ctypes.CDLL`) The ImageMagick library.  It is the same with
- #: :data:`library` on platforms other than Windows.
- #:
- #: .. versionadded:: 0.1.10
--libmagick = libraries[1]
-+libmagick = ctypes.CDLL("@imagemagick_library@")
- 
- try:
-     library.MagickWandGenesis.argtypes = []

pkgs/development/python-modules/absl-py/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "absl-py";
-  version = "0.4.1";
+  version = "0.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1e6e70506fb4d867cf269af7bcc27b744c36bbc4c516f0f8ccf2039956deea72";
+    sha256 = "87519e3b91a3d573664c6e2ee33df582bb68dca6642ae3cf3a4361b1c0a4e9d6";
   };
 
   propagatedBuildInputs = [ six ];

pkgs/development/python-modules/acoustics/default.nix

@@ -21,5 +21,6 @@ buildPythonPackage rec {
     maintainers = with maintainers; [ fridh ];
     license = with licenses; [ bsd3 ];
     homepage = https://github.com/python-acoustics/python-acoustics;
+    broken = true;
   };
 }

pkgs/development/python-modules/aioeventlet/default.nix

@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "aioeventlet";
-  version = "0.4";
+  version = "0.5.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "19krvycaiximchhv1hcfhz81249m3w3jrbp2h4apn1yf4yrc4y7y";
+    sha256 = "cecb51ea220209e33b53cfb95124d90e4fcbee3ff8ba8a179a57120b8624b16a";
   };
 
   propagatedBuildInputs = [ eventlet trollius asyncio ];

pkgs/development/python-modules/aiohttp-jinja2/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "aiohttp-jinja2";
-  version = "1.0.0";
+  version = "1.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "df1ba60b8779d232a23e5e38589b85f6430e9ace5adce546353155349bdea023";
+    sha256 = "aef9b6595f962182ad00c990095fb51d731c280e1d183e2b28cf0bdb5a942d0c";
   };
 
   propagatedBuildInputs = [ aiohttp jinja2 ];

pkgs/development/python-modules/alembic/default.nix

@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "alembic";
-  version = "1.0.0";
+  version = "1.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52d73b1d750f1414fa90c25a08da47b87de1e4ad883935718a8f36396e19e78e";
+    sha256 = "4b6ff7433247fe80b6ef522ef3763acb959cbdef027d03f76f4cd3c7118c1872";
   };
 
   buildInputs = [ pytest pytestcov mock coverage ];

pkgs/development/python-modules/altair/default.nix

@@ -1,30 +1,33 @@
 { stdenv, buildPythonPackage, fetchPypi, fetchpatch
 , pytest, jinja2, sphinx, vega_datasets, ipython, glibcLocales
-, entrypoints, jsonschema, numpy, pandas, six, toolz, typing }:
+, entrypoints, jsonschema, numpy, pandas, six, toolz, typing
+, pythonOlder, recommonmark }:
 
 buildPythonPackage rec {
   pname = "altair";
-  version = "2.1.0";
+  version = "2.2.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e8b222588dde98ec614e6808357fde7fa321118db44cc909df2bf30158d931c0";
+    sha256 = "c158699026eb5a19f95c1ca742e2e82bc20c27013ef5785f10836283e2233f8a";
   };
 
-  patches = fetchpatch {
+  checkInputs = [ pytest jinja2 sphinx vega_datasets ipython glibcLocales recommonmark ];
-    url = https://github.com/altair-viz/altair/commit/bfca8aecce9593c48aa5834e3f8f841deb58391c.patch;
-    sha256 = "01izc5d8c6ry3mh0k0hfasb6jc4720g75yw2qdlp9ja8mnjsp4k3";
-  };
 
-  checkInputs = [ pytest jinja2 sphinx vega_datasets ipython glibcLocales ];
+  propagatedBuildInputs = [ entrypoints jsonschema numpy pandas six toolz ]
+    ++ stdenv.lib.optionals (pythonOlder "3.5") [ typing ];
+
+  # hack to prevent typing from being required for python > 3.5
+  postPatch = ''
+    substituteInPlace requirements.txt \
+       --replace "typing" ""
+  '';
 
   checkPhase = ''
     export LANG=en_US.UTF-8
     py.test altair --doctest-modules
   '';
 
-  propagatedBuildInputs = [ entrypoints jsonschema numpy pandas six toolz typing ];
-
   meta = with stdenv.lib; {
     description = "A declarative statistical visualization library for Python.";
     homepage = https://github.com/altair-viz/altair;

pkgs/development/python-modules/argh/default.nix

@@ -4,19 +4,20 @@
 , pytest
 , py
 , mock
-, pkgs
+, glibcLocales
+, iocapture
 }:
 
 buildPythonPackage rec {
   pname = "argh";
-  version = "0.26.1";
+  version = "0.26.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1nqham81ihffc9xmw85dz3rg3v90rw7h0dp3dy0bh3qkp4n499q6";
+    sha256 = "e9535b8c84dc9571a48999094fda7f33e63c3f1b74f3e5f3ac0105a58405bb65";
   };
 
-  buildInputs = [ pytest py mock pkgs.glibcLocales ];
+  checkInputs = [ pytest py mock glibcLocales iocapture ];
 
   checkPhase = ''
     export LANG="en_US.UTF-8"

pkgs/development/python-modules/asyncio/default.nix

@@ -1,9 +1,9 @@
-{ stdenv, buildPythonPackage, fetchPypi, pythonOlder }:
+{ stdenv, buildPythonPackage, fetchPypi, isPy34 }:
 
 buildPythonPackage rec {
   pname = "asyncio";
   version = "3.4.3";
-  disabled = pythonOlder "3.3";
+  disabled = !isPy34;
 
   src = fetchPypi {
     inherit pname version;

pkgs/development/python-modules/atomicwrites/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "atomicwrites";
-  version = "1.1.5";
+  version = "1.2.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "240831ea22da9ab882b551b31d4225591e5e447a68c5e188db5b89ca1d487585";
+    sha256 = "ec9ae8adaae229e4f8446952d204a3e4b5fdd2d099f9be3aaf556120135fb3ee";
   };
 
   meta = with stdenv.lib; {

pkgs/development/python-modules/attrs/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "attrs";
-  version = "18.1.0";
+  version = "18.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e0d0eb91441a3b53dab4d9b743eafc1ac44476296a2053b6ca3af0b139faf87b";
+    sha256 = "10cbf6e27dbce8c30807caf056c8eb50917e0eaafe86347671b57254006c3e69";
   };
 
   # macOS needs clang for testing

pkgs/development/python-modules/autopep8/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "autopep8";
-  version = "1.4.2";
+  version = "1.4.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1b8d42ebba751a91090d3adb5c06840b1151d71ed43e1c7a9ed6911bfe8ebe6c";
+    sha256 = "33d2b5325b7e1afb4240814fe982eea3a92ebea712869bfd08b3c0393404248c";
   };
 
   propagatedBuildInputs = [ pycodestyle ];

pkgs/development/python-modules/av/default.nix

@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "av";
-  version = "0.5.3";
+  version = "6.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0k5nbff8c2wxc8wnyn1qghndbd2rjck1y3552s63w41mccj1k1qr";
+    sha256 = "9037d73d7a812c3dc75d9cc27d03215483c9e782eae63a07142c0725c6bd2df0";
   };
 
   buildInputs = [ nose pillow numpy ffmpeg_4 git pkgconfig ];

pkgs/development/python-modules/awkward/default.nix

@@ -1,23 +1,28 @@
-{ stdenv
+{ lib
 , buildPythonPackage
 , fetchPypi
 , numpy
+, pytestrunner
+, pytest
+, h5py
 }:
 
 buildPythonPackage rec {
-  version = "0.3.0";
   pname = "awkward";
+  version = "0.5.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fc3080c66987f2a03aa9ba0809e51227eb7aa34198da4b1ee4deb95356409693";
+    sha256 = "bc824882f80ae07d442a011eb6d14a6fce581e022d4ff6c73d89d93c832ee3cc";
   };
 
+  buildInputs = [ pytestrunner h5py ];
+  checkInputs = [ pytest ];
   propagatedBuildInputs = [ numpy ];
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
+    description = "Manipulate jagged, chunky, and/or bitmasked arrays as easily as Numpy.";
     homepage = https://github.com/scikit-hep/awkward-array;
-    description = "Manipulate jagged, chunky, and/or bitmasked arrays as easily as Numpy";
     license = licenses.bsd3;
     maintainers = [ maintainers.costrouc ];
   };

pkgs/development/python-modules/aws-adfs/default.nix

@@ -2,12 +2,12 @@
 , pytest, pytestrunner, pytestcov, mock, glibcLocales, lxml, boto3, requests, click, configparser }:
 
 buildPythonPackage rec {
-  version = "0.12.1";
+  version = "1.12.2";
   pname = "aws-adfs";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "72725d7005252b96ccfa9719fe4beec2b86301bff894d4d97a50fc1d05393fd8";
+    sha256 = "e35fbd33e1878310099346a95b7eb5244831c9f5f6554bca7193ac50dcd41aa3";
   };
 
   # Relax version constraint

pkgs/development/python-modules/aws-sam-translator/default.nix

@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "aws-sam-translator";
-  version = "1.6.1";
+  version = "1.8.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "23160f717bd65de810fa538b7c145eae4384d10adb460e375d148de7f283bd10";
+    sha256 = "bdf9ba476a9a7726fe93746670ccae257955352d98b231f32e9529f01db7ef3b";
   };
 
   # Tests are not included in the PyPI package

pkgs/development/python-modules/aws-xray-sdk/default.nix

@@ -5,19 +5,20 @@
 , wrapt
 , requests
 , future
+, botocore
 }:
 
 buildPythonPackage rec {
   pname = "aws-xray-sdk";
-  version = "1.1.2";
+  version = "2.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8ec3c6c82e76c03799ec209ed59642d78f62218db6a430f7e2d20491cac3c5ef";
+    sha256 = "fc5537268cc8041f74e14077c4b4b4cef0f3de25ecef793ace63cedf87fe4a2a";
   };
 
   propagatedBuildInputs = [
-    jsonpickle wrapt requests future
+    jsonpickle wrapt requests future botocore
   ];
 
   meta = {

pkgs/development/python-modules/azure-common/default.nix

@@ -7,14 +7,14 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.0.0";
+  version = "1.1.16";
   pname = "azure-common";
   disabled = isPyPy;
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "074rwwy8zzs7zw3nww5q2wg5lxgdc4rmypp2gfc9mwsz0gb70491";
+    sha256 = "2606ae77ff81c0036965b92ec2efe03eaec02a66714140ca0f7aa401b8b9bbb0";
   };
 
   propagatedBuildInputs = [ azure-nspkg ];

pkgs/development/python-modules/azure-mgmt-compute/default.nix

@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.20.0";
+  version = "4.3.1";
   pname = "azure-mgmt-compute";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "12hr5vxdg2sk2fzr608a37f4i8nbchca7dgdmly2w5fc7x88jx2v";
+    sha256 = "5b0c2390af3e29d910e3d6e7a72b0be59d6e15933740dd193129217c000e4fed";
   };
 
   preConfigure = ''

pkgs/development/python-modules/azure-mgmt-network/default.nix

@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.20.1";
+  version = "2.2.1";
   pname = "azure-mgmt-network";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "10vj22h6nxpw0qpvib5x2g6qs5j8z31142icvh4qk8k40fcrs9hx";
+    sha256 = "a4327bccc435ca4f829ac18f82f17923b490958c202af7a86044ccabeaaa5401";
   };
 
   preConfigure = ''

pkgs/development/python-modules/azure-mgmt-nspkg/default.nix

@@ -5,13 +5,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.0.0";
+  version = "3.0.2";
   pname = "azure-mgmt-nspkg";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "1rq92fj3kvnqkk18596dybw0kvhgscvc6cd8hp1dhy3wrkqnhwmq";
+    sha256 = "8b2287f671529505b296005e6de9150b074344c2c7d1c805b3f053d081d58c52";
   };
 
   propagatedBuildInputs = [ azure-nspkg ];

pkgs/development/python-modules/azure-mgmt-resource/default.nix

@@ -7,13 +7,13 @@
 
 
 buildPythonPackage rec {
-  version = "0.20.1";
+  version = "2.0.0";
   pname = "azure-mgmt-resource";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "0slh9qfm5nfacrdm3lid0sr8kwqzgxvrwf27laf9v38kylkfqvml";
+    sha256 = "2e83289369be88d0f06792118db5a7d4ed7150f956aaae64c528808da5518d7f";
   };
 
   preConfigure = ''

pkgs/development/python-modules/azure-mgmt-storage/default.nix

@@ -6,13 +6,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.20.0";
+  version = "3.0.0";
   pname = "azure-mgmt-storage";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "16iw7hqhq97vlzfwixarfnirc60l5mz951p57brpcwyylphl3yim";
+    sha256 = "24c52b9dcb5e224ca9572d6ec39b53d332bdfe01818e85ec1cc1b5bedf16ce07";
   };
 
   preConfigure = ''

pkgs/development/python-modules/azure-nspkg/default.nix

@@ -4,13 +4,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.0.0";
+  version = "3.0.2";
   pname = "azure-nspkg";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "293f286c15ea123761f30f5b1cb5adebe5f1e5009efade923c6dd1e017621bf7";
+    sha256 = "e7d3cea6af63e667d87ba1ca4f8cd7cb4dfca678e4c55fc1cedb320760e39dd0";
   };
 
   meta = with pkgs.lib; {

pkgs/development/python-modules/azure-servicemanagement-legacy/default.nix

@@ -7,13 +7,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.20.1";
+  version = "0.20.6";
   pname = "azure-servicemanagement-legacy";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "17dwrp99sx5x9cm4vldkaxhki9gbd6dlafa0lpr2n92xhh2838zs";
+    sha256 = "c883ff8fa3d4f4cb7b9344e8cb7d92a9feca2aa5efd596237aeea89e5c10981d";
   };
 
   propagatedBuildInputs = [ azure-common requests ];

pkgs/development/python-modules/azure/default.nix

@@ -10,13 +10,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.11.0";
+  version = "4.0.0";
   pname = "azure";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "89c20b2efaaed3c6f56345d55c32a8d4e7d2a16c032d0acb92f8f490c508fe24";
+    sha256 = "7d6afa332fccffe1a9390bcfac5122317eec657c6029f144d794603a81cd0e50";
   };
 
   propagatedBuildInputs = [ dateutil pyopenssl requests ]

pkgs/development/python-modules/backports-shutil-which/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "backports.shutil_which";
-  version = "3.5.1";
+  version = "3.5.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "16sa3adkf71862cb9pk747pw80a2f1v5m915ijb4fgj309xrlhyx";
+    sha256 = "fe39f567cbe4fad89e8ac4dbeb23f87ef80f7fe8e829669d0221ecdb0437c133";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/bleach/default.nix

@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "bleach";
-  version = "2.1.4";
+  version = "3.0.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ee95f6167129859c5dce9b1ca291ebdb5d8cd7e382ca0e237dfd0dad63f63d8";
+    sha256 = "48d39675b80a75f6d1c3bdbffec791cf0bbbab665cf01e20da701c77de278718";
   };
 
   checkInputs = [ pytest pytestrunner ];

pkgs/development/python-modules/blessings/default.nix

@@ -1,20 +1,29 @@
 { stdenv
 , buildPythonPackage
 , fetchPypi
+, six
+, nose
 }:
 
 buildPythonPackage rec {
   pname = "blessings";
-  version = "1.6";
+  version = "1.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "01rhgn2c3xjf9h1lxij9m05iwf2ba6d0vd7nic26c2gic4q73igd";
+    sha256 = "98e5854d805f50a5b58ac2333411b0482516a8210f23f43308baeb58d77c157d";
   };
 
   # 4 failing tests, 2to3
   doCheck = false;
 
+  propagatedBuildInputs = [ six ];
+  checkInputs = [ nose ];
+
+  checkPhase = ''
+    nosetests
+  '';
+
   meta = with stdenv.lib; {
     homepage = https://github.com/erikrose/blessings;
     description = "A thin, practical wrapper around terminal coloring, styling, and positioning";

pkgs/development/python-modules/bokeh/default.nix

@@ -33,11 +33,11 @@
 
 buildPythonPackage rec {
   pname = "bokeh";
-  version = "1.0.0";
+  version = "1.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1h1g3jw53srcvbgl1jb9p2rfi7kjz6c91hbqxfbr3s2wx1f67ahn";
+    sha256 = "43aa8b867f2db99c0cf3178149d2533e9e954a8355d6161381d0b8765c90db5e";
   };
 
   disabled = isPyPy;

pkgs/development/python-modules/bootstrapped-pip/default.nix

@@ -9,9 +9,9 @@ let
   };
   setuptools_source = fetchPypi {
     pname = "setuptools";
-    version = "40.4.3";
+    version = "40.6.2";
     format = "wheel";
-    sha256 = "1zzryv1fqx4nk7hzv4afxpl8k7f60lc0qkhxlc8sqjs4igakfhff";
+    sha256 = "88ee6bcd5decec9bd902252e02e641851d785c6e5e75677d2744a9d13fed0b0a";
   };
 
 in stdenv.mkDerivation rec {

pkgs/development/python-modules/boto3/default.nix

@@ -1,6 +1,6 @@
 { lib
 , buildPythonPackage
-, fetchFromGitHub
+, fetchPypi
 , botocore
 , jmespath
 , s3transfer
@@ -13,13 +13,11 @@
 
 buildPythonPackage rec {
   pname =  "boto3";
-  version = "1.7.84";
+  version = "1.9.62"; # N.B: if you change this, change botocore too
 
-  src = fetchFromGitHub {
+  src = fetchPypi {
-    owner = "boto";
+    inherit pname version;
-    repo  = "boto3";
+    sha256 = "0rf3ik4bqr0qab2648rcaahycr2sih257ngz8brizyfln0lk1sg9";
-    rev   = version;
-    sha256 = "0d9kqjqmnn53p1xpmdbbjxcxv2482yx3vjhxw8izp0mpq58i5c14";
   };
 
   propagatedBuildInputs = [ botocore jmespath s3transfer ] ++ lib.optionals (!isPy3k) [ futures ];
@@ -47,4 +45,4 @@ buildPythonPackage rec {
       services like Amazon S3 and Amazon EC2.
     '';
   };
-}
+}

pkgs/development/python-modules/botocore/default.nix

@@ -7,15 +7,16 @@
 , simplejson
 , mock
 , nose
+, urllib3
 }:
 
 buildPythonPackage rec {
   pname = "botocore";
-  version = "1.10.84";
+  version = "1.12.62"; # N.B: if you change this, change boto3 and awscli to a matching version
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d3e4b5a2c903ea30d19d41ea2f65d0e51dce54f4f4c4dfd6ecd7b04f240844a8";
+    sha256 = "0zgq3cldrh1x65s3vy1mhp1h5nnsdxw7ig1v0di7p8yns3iazsv7";
   };
 
   propagatedBuildInputs = [
@@ -24,6 +25,7 @@ buildPythonPackage rec {
     docutils
     ordereddict
     simplejson
+    urllib3
   ];
 
   checkInputs = [ mock nose ];

pkgs/development/python-modules/branca/default.nix

@@ -4,19 +4,20 @@
 , pytest
 , jinja2
 , selenium
+, six
 }:
 
 buildPythonPackage rec {
   pname = "branca";
-  version = "0.3.0";
+  version = "0.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bea38396cf58fd7173ac942277fe4138127eb1546622684206cb34d344b03fb4";
+    sha256 = "3e762c9bdf40725f3d05ea1fda8fae9b470bfada6474e43a1242c8204a7bb15e";
   };
 
   checkInputs = [ pytest selenium ];
-  propagatedBuildInputs = [ jinja2 ];
+  propagatedBuildInputs = [ jinja2 six ];
 
   # Seems to require a browser
   doCheck = false;

pkgs/development/python-modules/buildbot/default.nix

@@ -24,11 +24,11 @@ let
 
   package = buildPythonPackage rec {
     pname = "buildbot";
-    version = "1.4.0";
+    version = "1.5.0";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "0dfa926nh642i3bnpzlz0q347zicyx6wswjfqbniri59ya64fncx";
+      sha256 = "d02a717222bcdc98205624c7d6b0b2ae24653170f2971946f26bf8cadea4fd52";
     };
 
     propagatedBuildInputs = [

pkgs/development/python-modules/cached-property/default.nix

@@ -7,20 +7,21 @@
 
 buildPythonPackage rec {
   pname = "cached-property";
-  version = "1.4.2";
+  version = "1.5.1";
 
   # conftest.py is missing in PyPI tarball
   src = fetchFromGitHub {
     owner = "pydanny";
     repo = pname;
     rev = version;
-    sha256 = "0gjmgfilhljkx2b60cjikwh55jg2jwxhwi8hgkrzdnzk465ywhrw";
+    sha256 = "0xh0pwmiikx0il9nnfyf034ydmlw6992s0d209agd9j5d3s2k5q6";
   };
 
   checkInputs = [ pytest freezegun ];
 
+  # https://github.com/pydanny/cached-property/issues/131
   checkPhase = ''
-    py.test
+    py.test -k "not test_threads_ttl_expiry"
   '';
 
   meta = {

pkgs/development/python-modules/can/default.nix

@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "python-can";
-  version = "2.2.1";
+  version = "3.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b5e93b2ee32bdd597d9d908afe5171c402a04c9678ba47b60f33506738b1375b";
+    sha256 = "0d2ddb3b663af51b11a4c7fb7a577c63302a831986239f82bb6af65efc065b07";
   };
 
   propagatedBuildInputs = [ wrapt pyserial ];

pkgs/development/python-modules/cement/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "cement";
-  version = "3.0.0";
+  version = "3.0.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e50e1033d61d18b36787a60d52cad0d3fe20780e7e2f78f0204bde32000645f9";
+    sha256 = "8c692493c9d97b07e4a2c0770223fa5ee12a3110cfcb246d7d26fffe22edd22e";
   };
 
   # Disable test tests since they depend on a memcached server running on

pkgs/development/python-modules/certifi/default.nix

@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "certifi";
-  version = "2018.8.24";
+  version = "2018.10.15";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "376690d6f16d32f9d1fe8932551d80b23e9d393a8578c5633a2ed39a64861638";
+    sha256 = "6d58c986d22b038c8c0df30d639f23a3e6d172a05c3583e766f4c0b785c0986a";
   };
 
   meta = {

pkgs/development/python-modules/chainer/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "chainer";
-  version = "4.4.0";
+  version = "5.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9cc4d43e1ea3e0766e211e4e755dbb879f2cf27a805cfa52e32b99fd1e5f24dd";
+    sha256 = "74c11c3f20c33f85d3f42cc237a55efc384dc6f42035d6d2448318b182f236ee";
   };
 
   checkInputs = [

pkgs/development/python-modules/chalice/default.nix

@@ -0,0 +1,65 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, attrs
+, botocore
+, click
+, enum-compat
+, jmespath
+, pip
+, setuptools
+, six
+, typing
+, wheel
+, pythonOlder
+, watchdog
+, pytest
+, hypothesis
+, mock
+}:
+
+buildPythonPackage rec {
+  pname = "chalice";
+  version = "1.6.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "783ba3c603b944ba32f0ee39f272dc192f2097cfc520692f4dcb718bebdf940e";
+  };
+
+  checkInputs = [ watchdog pytest hypothesis mock ];
+  propagatedBuildInputs = [
+    attrs
+    botocore
+    click
+    enum-compat
+    jmespath
+    pip
+    setuptools
+    six
+    wheel
+    typing
+  ];
+
+  # conftest.py not included with pypi release
+  doCheck = false;
+
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace 'pip>=9,<=18' 'pip' \
+      --replace 'typing==3.6.4' 'typing' \
+      --replace 'attrs==17.4.0' 'attrs' \
+      --replace 'click>=6.6,<7.0' 'click'
+  '';
+
+  checkPhase = ''
+    pytest tests
+  '';
+
+  meta = with lib; {
+    description = "Python Serverless Microframework for AWS";
+    homepage = https://github.com/aws/chalice;
+    license = licenses.asl20;
+    maintainers = [ maintainers.costrouc ];
+  };
+}

pkgs/development/python-modules/channels/default.nix

@@ -3,11 +3,11 @@
 }:
 buildPythonPackage rec {
   pname = "channels";
-  version = "2.1.3";
+  version = "2.1.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8d503d18b92cef488ba68808a2205e055d29a6a1abae92d277f8f7a9c8752f13";
+    sha256 = "48f97f1801e0a8da6d01430d16d4ed8bd460d4ec3130c66075fb94b12bb30a67";
   };
 
   # Files are missing in the distribution

pkgs/development/python-modules/cherrypy/default.nix

@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "CherryPy";
-  version = "17.3.0";
+  version = "18.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c3e4d76232ade4c47666b9008f92556465df517b8dca833ece3bed027028ae7d";
+    sha256 = "3002fc47b982c3df4d08dbe5996b093fd73f85b650ab8df19e8b9b95f5c00520";
   };
 
   propagatedBuildInputs = [ cheroot contextlib2 portend routes six zc_lockfile ];

pkgs/development/python-modules/cli-helpers/default.nix

@@ -11,11 +11,11 @@
 
 buildPythonPackage rec {
   pname = "cli_helpers";
-  version = "1.0.2";
+  version = "1.1.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1z5rqm8pznj6bvivm2al8rsxm82rai8hc9bqrgh3ksnbzg2kfy7p";
+    sha256 = "7c2038bba0c41f41acae0f6e660ff3b00d69f55d9d968f024952cace78111e12";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/click/default.nix

@@ -2,11 +2,12 @@
 
 buildPythonPackage rec {
   pname = "click";
-  version = "6.7";
+  version = "7.0";
 
   src = fetchPypi {
-    inherit pname version;
+    pname = "Click";
-    sha256 = "02qkfpykbq35id8glfgwc38yc430427yd05z1wc5cnld8zgicmgi";
+    inherit version;
+    sha256 = "5b94b49521f6456670fdb30cd82a4eca9412788a93fa6dd6df72c94d5a8ff2d7";
   };
 
   patches = stdenv.lib.optional (stdenv.lib.versionAtLeast version "6.7") (substituteAll {

pkgs/development/python-modules/click/fix-paths.patch

@@ -1,11 +1,13 @@
---- a/click/_unicodefun.py	2018-06-11 15:08:59.369358278 +0200
+diff --git a/click/_unicodefun.py b/click/_unicodefun.py
-+++ b/click/_unicodefun.py	2018-06-11 15:09:09.342325998 +0200
+index 620edff..85a3c98 100644
-@@ -60,7 +60,7 @@
+--- a/click/_unicodefun.py
-     extra = ''
++++ b/click/_unicodefun.py
+@@ -63,7 +63,7 @@ def _verify_python3_env():
      if os.name == 'posix':
          import subprocess
--        rv = subprocess.Popen(['locale', '-a'], stdout=subprocess.PIPE,
+         try:
-+        rv = subprocess.Popen(['@locale@', '-a'], stdout=subprocess.PIPE,
+-            rv = subprocess.Popen(['locale', '-a'], stdout=subprocess.PIPE,
-                               stderr=subprocess.PIPE).communicate()[0]
++            rv = subprocess.Popen(['@locale@', '-a'], stdout=subprocess.PIPE,
-         good_locales = set()
+                                   stderr=subprocess.PIPE).communicate()[0]
-         has_c_utf8 = False
+         except OSError:
+             rv = b''

pkgs/development/python-modules/clize/default.nix

@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "clize";
-  version = "3.0";
+  version = "4.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1xkr3h404d7pgj5gdpg6bddv3v3yq2hgx8qlwkgw5abg218k53hm";
+    sha256 = "dbcfba5571dc30aaf90dc98fc279e2aab69d0f8f3665fc0394fbc10a87a2be60";
   };
 
   buildInputs = [ dateutil ];

pkgs/development/python-modules/cloudpickle/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "cloudpickle";
-  version = "0.5.6";
+  version = "0.6.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0390ecb3731ac035d74c34651460f4a683e9ef7443861712b8d56c20c2f92113";
+    sha256 = "f169a8523a40eb0a3452e1878aac31da6759409fbafa51dd50d89d4a6b42bcf1";
   };
 
   buildInputs = [ pytest mock ];

pkgs/development/python-modules/clustershell/default.nix

@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "ClusterShell";
-  version = "1.8";
+  version = "1.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1bm0pq8w2rql9q9i2bhs865rqvb6zck3h3gkb1d0mh59arrr7p4m";
+    sha256 = "e913efb4fe017eed9731d5ad8be397509e7f1966e6cb6441ee2bce074b16b310";
   };
 
   propagatedBuildInputs = [ pyyaml ];

pkgs/development/python-modules/commonmark/default.nix

@@ -1,12 +1,12 @@
 { lib, buildPythonPackage, fetchPypi, isPy3k, glibcLocales, future }:
 
 buildPythonPackage rec {
-  pname = "CommonMark";
+  pname = "commonmark";
-  version = "0.7.5";
+  version = "0.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4dfbbd1dbc669a9b71a015032b2bbe5c4b019ca8b6ca410d89cf7020de46d2c0";
+    sha256 = "abcbc854e0eae5deaf52ae5e328501b78b4a0758bf98ac8bb792fce993006084";
   };
 
   preCheck = ''

pkgs/development/python-modules/cornice/default.nix

@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "cornice";
-  version = "3.4.1";
+  version = "3.4.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a7f8db903ba06c2584c7db4474459de3565d90b5e4ae4b97c687840e11d5b7fd";
+    sha256 = "c88f246aa6a84a0cdbaa8231a062c60e18ad9c0a65dc178f536ce5eb3a831418";
   };
 
   propagatedBuildInputs = [ pyramid simplejson six venusian ];

pkgs/development/python-modules/coverage/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "coverage";
-  version = "4.5.1";
+  version = "4.5.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "56e448f051a201c5ebbaa86a5efd0ca90d327204d8b059ab25ad0f35fbfd79f1";
+    sha256 = "ab235d9fe64833f12d1334d29b558aacedfbca2356dfb9691f2d0d38a8a7bfb4";
   };
 
   # No tests in archive

pkgs/development/python-modules/coveralls/default.nix

@@ -16,12 +16,12 @@
 buildPythonPackage rec {
   pname = "coveralls";
   name = "${pname}-python-${version}";
-  version = "1.4.0";
+  version = "1.5.1";
 
   # wanted by tests
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7ddb2e3114db9604a7cb1fcc68a7dcca32dce346f5ba568c99979b38e166f5a6";
+    sha256 = "ab638e88d38916a6cedbf80a9cd8992d5fa55c77ab755e262e00b36792b7cd6d";
   };
 
   checkInputs = [

pkgs/development/python-modules/cufflinks/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "cufflinks";
-  version = "0.13.0";
+  version = "0.14.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "59f1bae67aaa5042c8f9f94caba44b9b8e6e530ce9e81f6e06b643aca253d2f4";
+    sha256 = "4188324361cc584214150aadaeb28ed07e9d150adb714b53c5f09d5b3fcdd28a";
   };
 
   propagatedBuildInputs = [ pandas plotly colorlover ];

pkgs/development/python-modules/cupy/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "cupy";
-  version = "4.4.1";
+  version = "5.0.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d46a3eea628a17b9c3f446e4b13513a1f0cc0b9930214417b41c90dcf0bb427f";
+    sha256 = "557e665d6f2e74e21987b6736d580ec919f51205623fe3d79df06b9d22b3e09d";
   };
 
   checkInputs = [

pkgs/development/python-modules/cx_oracle/default.nix

@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "cx_Oracle";
-  version = "6.4.1";
+  version = "7.0.0";
 
   buildInputs = [ odpic ];
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3519bf3263c9892aaadc844735aca02d3773ed9b92f97e069cd1726882a7d1b6";
+    sha256 = "75ee5edccf385d8e8b1443058909fbf3477bb1db12ab7f367aafba8d993fc828";
   };
 
   preConfigure = ''

pkgs/development/python-modules/cypari2/default.nix

@@ -12,11 +12,11 @@
 buildPythonPackage rec {
   pname = "cypari2";
   # upgrade may break sage, please test the sage build or ping @timokau on upgrade
-  version = "1.3.1";
+  version = "2.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "04f00xp8aaz37v00iqg1mv5wjq00a5qhk8cqa93s13009s9x984r";
+    sha256 = "32fad615d773e9b5a9394c078ddc2c868e64e35f1ac9633ff90b456901b9d886";
   };
 
   # This differs slightly from the default python installPhase in that it pip-installs

pkgs/development/python-modules/cytoolz/default.nix

@@ -32,9 +32,9 @@ buildPythonPackage rec {
   checkInputs = [ nose ];
   propagatedBuildInputs = [ toolz ];
 
-  # Disable failing test https://github.com/pytoolz/cytoolz/issues/97
+  # Failing test https://github.com/pytoolz/cytoolz/issues/122
   checkPhase = ''
-    NOSE_EXCLUDE=test_curried_exceptions nosetests -v $out/${python.sitePackages}
+    NOSE_EXCLUDE=test_introspect_builtin_modules nosetests -v $out/${python.sitePackages}
   '';
 
   meta = {

pkgs/development/python-modules/daemonize/default.nix

@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "daemonize";
-  version = "2.4.2";
+  version = "2.4.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0y139sq657bpzfv6k0aqm4071z4s40i6ybpni9qvngvdcz6r86n2";
+    sha256 = "c0194e861826be456c7c69985825ac7b79632d8ac7ad4cde8e12fee7971468c8";
   };
 
   meta = with stdenv.lib; {

pkgs/development/python-modules/dask-glm/default.nix

@@ -11,12 +11,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.1.0";
+  version = "0.2.0";
   pname = "dask-glm";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5a38d17538558fe6a3457cd67eed0a90a5dff51a9eaebb496efb68fc432ed89a";
+    sha256 = "58b86cebf04fe5b9e58092e1c467e32e60d01e11b71fdc628baaa9fc6d1adee5";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/dask-image/default.nix

@@ -10,12 +10,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.1.2";
+  version = "0.2.0";
   pname = "dask-image";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "401e2c345a582eb2859a4a2a4a6fcfbc85beece59705f3ead9b6708a0cd183e7";
+    sha256 = "bece2ea347f963dc0168c7d5fdfd11e51b47d9c857d3bc56144d7c146964a23f";
   };
 
   checkInputs = [ pytest scikitimage ];

pkgs/development/python-modules/dask-jobqueue/default.nix

@@ -8,12 +8,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.4.0";
+  version = "0.4.1";
   pname = "dask-jobqueue";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c73dae82b2a1d2a9f4ef17778f0de7a9237671a7fd3374aadd9d2bc07e92e848";
+    sha256 = "e559077fd27b68c325f06e3666e7072913f5282ad62347a233ca95ae00a4ced7";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/dask-ml/default.nix

@@ -19,12 +19,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.10.0";
+  version = "0.11.0";
   pname = "dask-ml";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4b6ca548c7282c1b6983e696e4bdfa0a2d7b51b168928b9322ea7a4b9a9f20f9";
+    sha256 = "a9e8e69494560dc23534adb236e88b3b21dc30a156648453c9c6e4b27ff2df96";
   };
 
   checkInputs = [ pytest xgboost tensorflow joblib distributed ];

pkgs/development/python-modules/dask/default.nix

@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "dask";
-  version = "0.18.2";
+  version = "0.20.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8fba559911788010ecedf58e540004d56d09f7829a1400dd72b74ffedafafabc";
+    sha256 = "d4139a03ab5eb6cedeb06cf1e39af90fb5226ca214d77408def7677d7e6b7af3";
   };
 
   checkInputs = [ pytest ];

pkgs/development/python-modules/datadog/default.nix

@@ -4,22 +4,21 @@
 
 buildPythonPackage rec {
   pname = "datadog";
-  version = "0.23.0";
+  version = "0.25.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6ed9aec2b3a26722b74465c2ed36d2efdb9c9fac1a07a84d81fa2fc0cfa66ae4";
+    sha256 = "e71f9024fb0b968bd704178c7e48fa41ce728281cc6913994db5e065596cddf1";
   };
 
+  postPatch = ''
+    find . -name '*.pyc' -exec rm {} \;
+  '';
+
   propagatedBuildInputs = [ decorator requests simplejson ];
 
   checkInputs = [ nose mock ];
 
-  # v0.20.0 tests are nondeterministic:
-  # test_send_batch_metrics: https://hydra.nixos.org/build/74920933
-  # test_timed_decorator_threaded: https://hydra.nixos.org/build/74328993
-  doCheck = false;
-
   meta = with lib; {
     description = "The Datadog Python library";
     license = licenses.bsd3;

pkgs/development/python-modules/datamodeldict/default.nix

@@ -5,12 +5,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.9.4";
+  version = "0.9.5";
   pname = "DataModelDict";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "97d8e999e000cf69c48e57b1a72eb45a27d83576a38c6cd8550c230b018be7af";
+    sha256 = "afa15c137c09e7d937e31c8956fd8092be0251c9869a6b7c1d0f81c0901bc47d";
   };
 
   propagatedBuildInputs = [ xmltodict ];

pkgs/development/python-modules/dateutil/default.nix

@@ -1,11 +1,11 @@
 { stdenv, buildPythonPackage, fetchPypi, six, setuptools_scm }:
 buildPythonPackage rec {
   pname = "python-dateutil";
-  version = "2.7.3";
+  version = "2.7.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e27001de32f627c22380a688bcc43ce83504a7bc5da472209b4c70f02829f0b8";
+    sha256 = "88f9287c0174266bb0d8cedd395cfba9c58e87e5ad86b2ce58859bc11be3cf02";
   };
 
   propagatedBuildInputs = [ six setuptools_scm ];

pkgs/development/python-modules/ddt/default.nix

@@ -1,17 +1,24 @@
 { stdenv
 , buildPythonPackage
 , fetchPypi
+, nose, six, pyyaml, mock
 }:
 
 buildPythonPackage rec {
   pname = "ddt";
-  version = "1.0.0";
+  version = "1.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e24ecb7e2cf0bf43fa9d4255d3ae2bd0b7ce30b1d1b89ace7aa68aca1152f37a";
+    sha256 = "898364fc34b27981b925171a0011c174c94633cb678eb1fac05fe7a234c7912c";
   };
 
+  checkInputs = [ nose six pyyaml mock ];
+
+  checkPhase = ''
+    nosetests -s
+  '';
+
   meta = with stdenv.lib; {
     description = "Data-Driven/Decorated Tests, a library to multiply test cases";
     homepage = https://github.com/txels/ddt;

pkgs/development/python-modules/deform/default.nix

@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "deform";
-  version = "2.0.6";
+  version = "2.0.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bda0b809c8a668e105e30650a6766103207eafdd12c313acd59274ccd2c4d297";
+    sha256 = "2ff29c32ebe544c0f0a77087e268b2cd9cb4b11fa35af3635d5b42913f88d74a";
   };
 
   postPatch = ''

pkgs/development/python-modules/dependency-injector/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "dependency-injector";
-  version = "3.13.2";
+  version = "3.14.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0kgb40qspibr1x8ksv0whrr7v0jy20dnqzmc591hm2y4kwzl5hdw";
+    sha256 = "f478a26e9bf3111ce98bbfb8502af274643947f87a7e12a6481a35eaa693062b";
   };
 
   propagatedBuildInputs = [ six ];

pkgs/development/python-modules/detox/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "detox";
-  version = "0.13";
+  version = "0.15";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f0c2af9c29f8e200a50b561ccc531df3087c80e7d3de6cfa9828f5fea3c8f56c";
+    sha256 = "accde1a79b621df9dfd55b97460e80743a771a3d9a1acd900489a4355f0cc8c7";
   };
 
   buildInputs = [ pytest ];

pkgs/development/python-modules/devpi-common/default.nix

@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "devpi-common";
-  version = "3.2.3";
+  version = "3.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d2ecae3a92b2da62ecc6586d1c40d265e61bce70d7f1be2327e8b98598ba2687";
+    sha256 = "30833581d03e07d7574b2ff698d213c984777dd44dd47c45c54d31858c694c94";
   };
 
   propagatedBuildInputs = [ requests py ];

pkgs/development/python-modules/dftfit/default.nix

@@ -21,12 +21,12 @@
 
 buildPythonPackage rec {
   pname = "dftfit";
-  version = "0.4.22";
+  version = "0.5.0";
   disabled = (!isPy3k);
 
   src = fetchPypi {
      inherit pname version;
-     sha256 = "06dbdc21cf9ed199bfceae5301172bee2164a3b9ef6f0814a089530c320ebb3a";
+     sha256 = "fd9e777157669d004e7c25adce3e7c697234283384c99aa0c23454173a14a7a8";
   };
 
   buildInputs = [ pytestrunner ];

pkgs/development/python-modules/distributed/default.nix

@@ -26,12 +26,12 @@
 
 buildPythonPackage rec {
   pname = "distributed";
-  version = "1.24.1";
+  version = "1.24.2";
 
   # get full repository need conftest.py to run tests
   src = fetchPypi {
     inherit pname version;
-    sha256 = "13qch8wgjzx9zadaxasym3bp3a74bg5snhnbznpggssv3hyshca7";
+    sha256 = "8ab24f0ea634dab7b6667c32b18c98794141f3ef3b081293dfea1943498ce987";
   };
 
   checkInputs = [ pytest pytest-repeat pytest-faulthandler pytest-timeout mock joblib ];

pkgs/development/python-modules/django_colorful/default.nix

@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "django-colorful";
-  version = "1.2";
+  version = "1.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0y34hzvfrm1xbxrd8frybc9yzgqvz4c07frafipjikw7kfjsw8az";
+    sha256 = "fd246f2fb297ed074dc4349966d33a1c82d0308b7fb0d6ef6e2e76b90cefffb7";
   };
 
   # Tests aren't run