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Merge pull request #10296 from FRidh/pandas

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python packages updates
This commit is contained in:
Domen Kožar 2015-10-26 15:59:14 +01:00
commit 1703d4dc5d
1 changed files with 54 additions and 47 deletions
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63
pkgs/top-level/python-packages.nix
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@ -9313,15 +9313,16 @@ let
modules.sqlite3
];
preCheck = ''
# Test does not work on Py3k because it calls 'python'.
# https://github.com/nipy/nibabel/issues/341
rm nisext/tests/test_testers.py
# Test fails with numpy 1.10.1: ERROR: nibabel.tests.test_proxy_api.TestPARRECAPI.test_proxy_slicing
# See https://github.com/nipy/nibabel/pull/358
# and https://github.com/numpy/numpy/issues/6491
preCheck = ''
rm nisext/tests/test_testers.py
rm nibabel/tests/test_proxy_api.py
# https://github.com/nipy/nibabel/issues/366
rm nisext/tests/test_doctest_markup.py
'';
meta = {
@ -9387,6 +9388,26 @@ let
};
};
nose-exclude = buildPythonPackage rec {
name = "nose-exclude-${version}";
version = "0.4.1";
src = pkgs.fetchurl {
url = "https://pypi.python.org/packages/source/n/nose-exclude/${name}.tar.gz";
sha256 = "44466a9bcb56d2e568750f91504d1278c74eabb259a305b06e975b87b51635da";
};
propagatedBuildInputs = with self; [ nose ];
meta = {
license = licenses.lgpl21;
description = "Exclude specific directories from nosetests runs";
homepage = https://github.com/kgrandis/nose-exclude;
maintainers = with maintainers; [ fridh ];
};
};
nose-selecttests = buildPythonPackage rec {
version = "0.4";
name = "nose-selecttests-${version}";
@ -10038,14 +10059,15 @@ let
inherit (pkgs.stdenv.lib) optional optionalString;
inherit (pkgs.stdenv) isDarwin;
in buildPythonPackage rec {
name = "pandas-0.16.2";
name = "pandas-${version}";
version = "0.17.0";
src = pkgs.fetchurl {
url = "https://pypi.python.org/packages/source/p/pandas/${name}.tar.gz";
sha256 = "10agmrkps8bi5948vwpipfxds5kj1d076m9i0nhaxwqiw7gm6670";
sha256 = "320d4fdf734b82adebc8fde9d8ca4b05fe155a72b6f7aa95d76242da8748d6a4";
};
buildInputs = [ self.nose ] ++ optional isDarwin pkgs.libcxx;
buildInputs = with self; [ nose ] ++ optional isDarwin pkgs.libcxx;
propagatedBuildInputs = with self; [
dateutil
numpy
@ -10071,31 +10093,16 @@ let
"['pandas/src/klib', 'pandas/src', '$cpp_sdk']"
'';
preCheck = ''
# Broken test, probably https://github.com/pydata/pandas/issues/10312:
rm pandas/io/tests/test_html.py
# Hitting https://github.com/pydata/pandas/pull/7362 on python
# 3.3 and 3.4, not sure why:
rm pandas/tseries/tests/test_daterange.py
# Need to skip this test; insert a line here... hacky but oh well.
badtest=pandas/tseries/tests/test_timezones.py
fixed=$TMPDIR/fixed_test_timezones.py
touch $fixed
head -n 602 $badtest > $fixed
echo ' raise nose.SkipTest("Not working")' >> $fixed
tail -n +603 $badtest >> $fixed
mv $fixed $badtest
'';
# The flag `-A 'not network'` will disable tests that use internet.
# The `-e` flag disables a few problematic tests.
# https://github.com/pydata/pandas/issues/11169
# https://github.com/pydata/pandas/issues/11287
checkPhase = ''
runHook preCheck
# The flag `-A 'not network'` will disable tests that use internet.
# The `-e` flag disables a few problematic tests.
${python.executable} setup.py nosetests -A 'not network' --stop \
-e 'test_clipboard|test_series' --verbosity=3
-e 'test_data|test_excel|test_html|test_json|test_frequencies|test_frame' --verbosity=3
runHook postCheck
'';
@ -16159,11 +16166,11 @@ let
xray = buildPythonPackage rec {
name = "xray-${version}";
version = "0.6.0";
version = "0.6.1";
src = pkgs.fetchurl {
url = "https://pypi.python.org/packages/source/x/xray/${name}.tar.gz";
sha256 = "c8c4aadb0d39662a81c259bd609f42708ff31c90012a9dd0a1f9ee56a798196f";
sha256 = "bfbc307203d5433b4da31c210773c8474c237ff97350874b6e436d452fb9dfc8";
};
buildInputs = with self; [nose];