2020-07-02 14:27:43 +02:00
										 
									 
								 
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								import ./make-test-python.nix ({ lib, pkgs, ... }:
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								let
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								    slurmconfig = {
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								      services.slurm = {
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								        controlMachine = "control";
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								        nodeName = [ "node[1-3] CPUs=1 State=UNKNOWN" ];
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								        partitionName = [ "debug Nodes=node[1-3] Default=YES MaxTime=INFINITE State=UP" ];
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								        extraConfig = ''
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								          AccountingStorageHost=dbd
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								          AccountingStorageType=accounting_storage/slurmdbd
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								        '';
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								      };
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								      environment.systemPackages = [ mpitest ];
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								      networking.firewall.enable = false;
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								      systemd.tmpfiles.rules = [
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								        "f /etc/munge/munge.key 0400 munge munge - mungeverryweakkeybuteasytointegratoinatest"
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								      ];
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								    };
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								    mpitest = let
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								      mpitestC = pkgs.writeText "mpitest.c" ''
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								        #include <stdio.h>
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								        #include <stdlib.h>
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								        #include <mpi.h>
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								        int
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								        main (int argc, char *argv[])
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								        {
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								          int rank, size, length;
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								          char name[512];
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								          MPI_Init (&argc, &argv);
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								          MPI_Comm_rank (MPI_COMM_WORLD, &rank);
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								          MPI_Comm_size (MPI_COMM_WORLD, &size);
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								          MPI_Get_processor_name (name, &length);
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								          if ( rank == 0 ) printf("size=%d\n", size);
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								          printf ("%s: hello world from process %d of %d\n", name, rank, size);
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								          MPI_Finalize ();
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								          return EXIT_SUCCESS;
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								        }
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								      '';
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								    in pkgs.runCommandNoCC "mpitest" {} ''
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								      mkdir -p $out/bin
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								      ${pkgs.openmpi}/bin/mpicc ${mpitestC} -o $out/bin/mpitest
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								    '';
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								in {
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								  name = "slurm";
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											2018-10-25 21:03:23 +02:00
										 
									 
								 
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								  meta.maintainers = [ lib.maintainers.markuskowa ];
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								  nodes =
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								    let
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								    computeNode =
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											2018-07-20 20:56:59 +00:00
										 
									 
								 
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								      { ...}:
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								      {
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        imports = [ slurmconfig ];
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								        # TODO slurmd port and slurmctld port should be configurations and
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								        # automatically allowed by the  firewall.
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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								        services.slurm = {
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								          client.enable = true;
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        };
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								      };
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								    in {
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								    control =
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											2018-07-20 20:56:59 +00:00
										 
									 
								 
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								      { ...}:
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								      {
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        imports = [ slurmconfig ];
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								        services.slurm = {
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								          server.enable = true;
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        };
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											2015-12-25 15:55:07 +01:00
										 
									 
								 
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								      };
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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								    submit =
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											2018-07-20 20:56:59 +00:00
										 
									 
								 
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								      { ...}:
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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								      {
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								        imports = [ slurmconfig ];
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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								        services.slurm = {
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								          enableStools = true;
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        };
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											2018-06-01 23:42:21 +02:00
										 
									 
								 
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								      };
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								    dbd =
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								      { pkgs, ... } :
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											2020-11-29 15:58:58 +01:00
										 
									 
								 
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								      let
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								        passFile = pkgs.writeText "dbdpassword" "password123";
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								      in {
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								        networking.firewall.enable = false;
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											2020-07-02 14:27:43 +02:00
										 
									 
								 
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								        systemd.tmpfiles.rules = [
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								          "f /etc/munge/munge.key 0400 munge munge - mungeverryweakkeybuteasytointegratoinatest"
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								        ];
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								        services.slurm.dbdserver = {
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								          enable = true;
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											2020-11-29 15:58:58 +01:00
										 
									 
								 
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								          storagePassFile = "${passFile}";
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								        };
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								        services.mysql = {
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								          enable = true;
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											2019-11-10 21:28:09 +01:00
										 
									 
								 
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								          package = pkgs.mariadb;
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								          initialScript = pkgs.writeText "mysql-init.sql" ''
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								            CREATE USER 'slurm'@'localhost' IDENTIFIED BY 'password123';
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								            GRANT ALL PRIVILEGES ON slurm_acct_db.* TO 'slurm'@'localhost';
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								          '';
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											2018-09-15 13:09:36 +02:00
										 
									 
								 
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								          ensureDatabases = [ "slurm_acct_db" ];
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								          ensureUsers = [{
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								            ensurePermissions = { "slurm_acct_db.*" = "ALL PRIVILEGES"; };
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								            name = "slurm";
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								          }];
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											2021-01-21 17:45:15 +01:00
										 
									 
								 
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								 | 
							
							
								          settings.mysqld = {
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											2018-11-22 13:21:37 +01:00
										 
									 
								 
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								 | 
							
							
								            # recommendations from: https://slurm.schedmd.com/accounting.html#mysql-configuration
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											2021-01-21 17:45:15 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
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								 | 
							
							
								            innodb_buffer_pool_size="1024M";
							 | 
						
					
						
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								 | 
							
							
								            innodb_log_file_size="64M";
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							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								            innodb_lock_wait_timeout=900;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          };
							 | 
						
					
						
							
								
									
										
										
										
											2018-09-15 13:09:36 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								        };
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      };
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								    node1 = computeNode;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								    node2 = computeNode;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								    node3 = computeNode;
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  };
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2018-06-01 23:42:21 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  testScript =
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  ''
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  start_all()
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2020-07-02 14:27:43 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  # Make sure DBD is up after DB initialzation
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("can_start_slurmdbd"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      dbd.succeed("systemctl restart slurmdbd")
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      dbd.wait_for_unit("slurmdbd.service")
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      dbd.wait_for_open_port(6819)
							 | 
						
					
						
							
								
									
										
										
										
											2018-09-15 13:09:36 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  # there needs to be an entry for the current
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  # cluster in the database before slurmctld is restarted
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("add_account"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      control.succeed("sacctmgr -i add cluster default")
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      # check for cluster entry
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      control.succeed("sacctmgr list cluster | awk '{ print $1 }' | grep default")
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("can_start_slurmctld"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      control.succeed("systemctl restart slurmctld")
							 | 
						
					
						
							
								
									
										
										
										
											2019-12-24 19:51:18 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      control.wait_for_unit("slurmctld.service")
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("can_start_slurmd"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      for node in [node1, node2, node3]:
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          node.succeed("systemctl restart slurmd.service")
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          node.wait_for_unit("slurmd")
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2018-09-15 13:09:36 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  # Test that the cluster works and can distribute jobs;
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("run_distributed_command"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      # Run `hostname` on 3 nodes of the partition (so on all the 3 nodes).
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
										
									
								 | 
							
							
								      # The output must contain the 3 different names
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      submit.succeed("srun -N 3 hostname | sort | uniq | wc -l | xargs test 3 -eq")
							 | 
						
					
						
							
								
									
										
										
										
											2018-09-15 13:09:36 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							
								
									
										
										
										
											2019-11-10 23:07:08 +01:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      with subtest("check_slurm_dbd"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          # find the srun job from above in the database
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          control.succeed("sleep 5")
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								          control.succeed("sacct | grep hostname")
							 | 
						
					
						
							
								
									
										
										
										
											2020-07-02 14:27:43 +02:00
										 
									 
								 
							 | 
							
								
									
										
									
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  with subtest("run_PMIx_mpitest"):
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								      submit.succeed("srun -N 3 --mpi=pmix mpitest | grep size=3")
							 | 
						
					
						
							
								
									
										
										
										
											2015-12-25 15:55:07 +01:00
										 
									 
								 
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								  '';
							 | 
						
					
						
							| 
								
							 | 
							
								
							 | 
							
								
							 | 
							
								
									
								 | 
							
							
								})
							 |